Domain of unknown function (DUF3444)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06340 AT3G06340 AT3G06340 AT3G06340 AT5G18750 |
| fragaria_vesca | FvH4_2g06370 |
| malus_domestica | MD13G1174800.v1.1 MD16G1176500.v1.1 |
| prunus_persica | Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 |
| pyrus_communis | pycom13g15060 pycom13g15070 pycom16g14800 pycom16g14810 |
| rosa_chinensis | RchiOBHm_Chr4g0420721 |
| rosa_laevigata | RLG00000007740 RLG00000030269 RLG00000030290 |
| rosa_multiflora | Rmu_co8498373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00363230 |
| rosa_rugosa | Rorug04G0165700 |
| rosa_samantha | Rh4AG227200 Rh4BG230000 Rh4CG242100 Rh4DG225500 |
| rosa_wichuraiana | Rw4G019660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1044 |
| AarI | CACCTGC | 1 cut(s) | 1429 |
| Acc36I | ACCTGC | 1 cut(s) | 1429 |
| Acc65I | GGTACC | 1 cut(s) | 1407 |
| AccB1I | GGYRCC | 1 cut(s) | 1407 |
| AciI | CCGC | 2 cut(s) | 230, 1185 |
| AclWI | GGATC | 2 cut(s) | 1754, 2014 |
| AcsI | RAATTY | 7 cut(s) | 987, 1299, 1318, 1500, 1607, 1796, 1995 |
| AcuI | CTGAAG | 8 cut(s) | 197, 761, 786, 834, 948, 950, 966, 1140 |
| AfaI | GTAC | 4 cut(s) | 257, 596, 1409, 1754 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 435, 436, 1709 |
| AflII | CTTAAG | 1 cut(s) | 718 |
| AflIII | ACRYGT | 2 cut(s) | 759, 895 |
| AgsI | TTSAA | 7 cut(s) | 467, 1393, 1430, 1519, 1732, 1790, 1919 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 835 |
| AjnI | CCWGG | 4 cut(s) | 457, 679, 1532, 1927 |
| AleI | CACNNNNGTG | 1 cut(s) | 674 |
| AluBI | AGCT | 9 cut(s) | 314, 325, 338, 794, 809, 846, 1338, 1583, 1780 |
| AluI | AGCT | 9 cut(s) | 314, 325, 338, 794, 809, 846, 1338, 1583, 1780 |
| Alw26I | GTCTC | 5 cut(s) | 138, 766, 990, 1108, 1709 |
| AlwI | GGATC | 2 cut(s) | 1754, 2014 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 314, 1780 |
| AoxI | GGCC | 3 cut(s) | 21, 1575, 1722 |
| ApeKI | GCWGC | 4 cut(s) | 314, 514, 517, 1030 |
| ApoI | RAATTY | 7 cut(s) | 987, 1299, 1318, 1500, 1607, 1796, 1995 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 615 |
| Asp718I | GGTACC | 1 cut(s) | 1407 |
| AspLEI | GCGC | 3 cut(s) | 103, 689, 1035 |
| AspS9I | GGNCC | 3 cut(s) | 355, 1575, 1722 |
| AsuC2I | CCSGG | 1 cut(s) | 537 |
| AsuHPI | GGTGA | 9 cut(s) | 49, 344, 1076, 1222, 1288, 1500, 1631, 1873, 1991 |
| AvaII | GGWCC | 1 cut(s) | 355 |
| BanI | GGYRCC | 1 cut(s) | 1407 |
| BanII | GRGCYC | 1 cut(s) | 82 |
| BbsI | GAAGAC | 2 cut(s) | 1074, 1140 |
| BbvI | GCAGC | 4 cut(s) | 301, 526, 529, 1042 |
| BccI | CCATC | 5 cut(s) | 187, 1055, 1895, 1969, 2008 |
| BceAI | ACGGC | 2 cut(s) | 1037, 1576 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 52, 86 |
| BciT130I | CCWGG | 4 cut(s) | 459, 681, 1534, 1929 |
| BciVI | GTATCC | 1 cut(s) | 218 |
| BclI | TGATCA | 1 cut(s) | 220 |
| BcnI | CCSGG | 1 cut(s) | 537 |
| BcoDI | GTCTC | 5 cut(s) | 138, 766, 990, 1108, 1709 |
| BfaI | CTAG | 2 cut(s) | 1488, 1538 |
| BfrI | CTTAAG | 1 cut(s) | 718 |
| BfuAI | ACCTGC | 1 cut(s) | 1429 |
| BfuI | GTATCC | 1 cut(s) | 218 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 29 |
| BglII | AGATCT | 2 cut(s) | 1013, 1639 |
| BisI | GCNGC | 5 cut(s) | 315, 515, 518, 1031, 1185 |
| BlsI | GCNGC | 5 cut(s) | 316, 516, 519, 1032, 1186 |
| Bme1390I | CCNGG | 5 cut(s) | 459, 537, 681, 1534, 1929 |
| Bme18I | GGWCC | 1 cut(s) | 355 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 835 |
| BmgT120I | GGNCC | 3 cut(s) | 355, 1575, 1722 |
| BmiI | GGNNCC | 1 cut(s) | 1409 |
| BmrFI | CCNGG | 5 cut(s) | 459, 537, 681, 1534, 1929 |
| BmrI | ACTGGG | 1 cut(s) | 1747 |
| BmsI | GCATC | 6 cut(s) | 45, 129, 538, 1148, 1334, 1461 |
| BmuI | ACTGGG | 1 cut(s) | 1747 |
| BpiI | GAAGAC | 2 cut(s) | 1074, 1140 |
| BpmI | CTGGAG | 4 cut(s) | 143, 460, 480, 488 |
| BpuEI | CTTGAG | 2 cut(s) | 1128, 1334 |
| BpuMI | CCSGG | 1 cut(s) | 537 |
| Bsa29I | ATCGAT | 2 cut(s) | 622, 2009 |
| BsaI | GGTCTC | 1 cut(s) | 990 |
| BsaJI | CCNNGG | 2 cut(s) | 536, 1007 |
| BsaWI | WCCGGW | 1 cut(s) | 1410 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 116, 146 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 435, 436, 1709 |
| Bse1I | ACTGG | 5 cut(s) | 203, 598, 909, 1742, 1981 |
| Bse3DI | GCAATG | 1 cut(s) | 160 |
| BseBI | CCWGG | 4 cut(s) | 459, 681, 1534, 1929 |
| BseCI | ATCGAT | 2 cut(s) | 622, 2009 |
| BseDI | CCNNGG | 2 cut(s) | 536, 1007 |
| BseGI | GGATG | 6 cut(s) | 238, 280, 1106, 1476, 1834, 1906 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 435, 436, 1709 |
| BseMI | GCAATG | 1 cut(s) | 160 |
| BseMII | CTCAG | 9 cut(s) | 36, 149, 162, 180, 876, 1046, 1296, 1503, 1815 |
| BseNI | ACTGG | 5 cut(s) | 203, 598, 909, 1742, 1981 |
| BseRI | GAGGAG | 1 cut(s) | 1065 |
| BseXI | GCAGC | 4 cut(s) | 301, 526, 529, 1042 |
| BsgI | GTGCAG | 1 cut(s) | 327 |
| Bsh1285I | CGRYCG | 1 cut(s) | 557 |
| BshFI | GGCC | 3 cut(s) | 23, 1577, 1724 |
| BshNI | GGYRCC | 1 cut(s) | 1407 |
| BshVI | ATCGAT | 2 cut(s) | 622, 2009 |
| BsiEI | CGRYCG | 1 cut(s) | 557 |
| BsiSI | CCGG | 2 cut(s) | 536, 1411 |
| BslFI | GGGAC | 2 cut(s) | 199, 1754 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 435, 436, 1709 |
| BsmAI | GTCTC | 5 cut(s) | 138, 766, 990, 1108, 1709 |
| BsmFI | GGGAC | 2 cut(s) | 199, 1754 |
| BsnI | GGCC | 3 cut(s) | 23, 1577, 1724 |
| Bso31I | GGTCTC | 1 cut(s) | 990 |
| Bsp1286I | GDGCHC | 1 cut(s) | 82 |
| Bsp1407I | TGTACA | 1 cut(s) | 1752 |
| BspACI | CCGC | 2 cut(s) | 230, 1185 |
| BspANI | GGCC | 3 cut(s) | 23, 1577, 1724 |
| BspCNI | CTCAG | 9 cut(s) | 37, 148, 163, 181, 875, 1047, 1297, 1504, 1816 |
| BspDI | ATCGAT | 2 cut(s) | 622, 2009 |
| BspLI | GGNNCC | 1 cut(s) | 1409 |
| BspMI | ACCTGC | 1 cut(s) | 1429 |
| BspPI | GGATC | 2 cut(s) | 1754, 2014 |
| BspQI | GCTCTTC | 1 cut(s) | 853 |
| BspT107I | GGYRCC | 1 cut(s) | 1407 |
| BspTI | CTTAAG | 1 cut(s) | 718 |
| BspTNI | GGTCTC | 1 cut(s) | 990 |
| BsrDI | GCAATG | 1 cut(s) | 160 |
| BsrGI | TGTACA | 1 cut(s) | 1752 |
| BsrI | ACTGG | 5 cut(s) | 203, 598, 909, 1742, 1981 |
| BssECI | CCNNGG | 2 cut(s) | 536, 1007 |
| Bst2UI | CCWGG | 4 cut(s) | 459, 681, 1534, 1929 |
| Bst4CI | ACNGT | 2 cut(s) | 359, 938 |
| Bst6I | CTCTTC | 6 cut(s) | 12, 633, 853, 1088, 1116, 1218 |
| BstAFI | CTTAAG | 1 cut(s) | 718 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 314 |
| BstAUI | TGTACA | 1 cut(s) | 1752 |
| BstC8I | GCNNGC | 4 cut(s) | 374, 512, 574, 729 |
| BstDSI | CCRYGG | 1 cut(s) | 1007 |
| BstF5I | GGATG | 6 cut(s) | 238, 280, 1106, 1476, 1834, 1906 |
| BstHHI | GCGC | 3 cut(s) | 103, 689, 1035 |
| BstMAI | GTCTC | 5 cut(s) | 138, 766, 990, 1108, 1709 |
| BstMCI | CGRYCG | 1 cut(s) | 557 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 29, 98, 314, 1030 |
| BstNI | CCWGG | 4 cut(s) | 459, 681, 1534, 1929 |
| BstNSI | RCATGY | 3 cut(s) | 376, 763, 899 |
| BstSCI | CCNGG | 5 cut(s) | 457, 535, 679, 1532, 1927 |
| BstV1I | GCAGC | 4 cut(s) | 301, 526, 529, 1042 |
| BstV2I | GAAGAC | 2 cut(s) | 1074, 1140 |
| BstX2I | RGATCY | 2 cut(s) | 1013, 1639 |
| BstYI | RGATCY | 2 cut(s) | 1013, 1639 |
| Bsu15I | ATCGAT | 2 cut(s) | 622, 2009 |
| BsuI | GTATCC | 1 cut(s) | 218 |
| BsuRI | GGCC | 3 cut(s) | 23, 1577, 1724 |
| BsuTUI | ATCGAT | 2 cut(s) | 622, 2009 |
| BtgI | CCRYGG | 1 cut(s) | 1007 |
| BtgZI | GCGATG | 1 cut(s) | 1074 |
| BtsCI | GGATG | 6 cut(s) | 238, 280, 1106, 1476, 1834, 1906 |
| BtsI | GCAGTG | 1 cut(s) | 925 |
| BtsIMutI | CAGTG | 5 cut(s) | 916, 925, 943, 1116, 1755 |
| BveI | ACCTGC | 1 cut(s) | 1429 |
| Cac8I | GCNNGC | 4 cut(s) | 374, 512, 574, 729 |
| CaiI | CAGNNNCTG | 2 cut(s) | 314, 1780 |
| CfoI | GCGC | 3 cut(s) | 103, 689, 1035 |
| Cfr13I | GGNCC | 3 cut(s) | 355, 1575, 1722 |
| ClaI | ATCGAT | 2 cut(s) | 622, 2009 |
| CseI | GACGC | 1 cut(s) | 1145 |
| Csp6I | GTAC | 4 cut(s) | 256, 595, 1408, 1753 |
| CviAII | CATG | 5 cut(s) | 373, 377, 760, 896, 1693 |
| CviQI | GTAC | 4 cut(s) | 256, 595, 1408, 1753 |
| DraI | TTTAAA | 1 cut(s) | 1464 |
| DriI | GACNNNNNGTC | 1 cut(s) | 835 |
| Eam1104I | CTCTTC | 6 cut(s) | 12, 633, 853, 1088, 1116, 1218 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 835 |
| EarI | CTCTTC | 6 cut(s) | 12, 633, 853, 1088, 1116, 1218 |
| Eco24I | GRGCYC | 1 cut(s) | 82 |
| Eco31I | GGTCTC | 1 cut(s) | 990 |
| Eco47I | GGWCC | 1 cut(s) | 355 |
| Eco57I | CTGAAG | 8 cut(s) | 197, 761, 786, 834, 948, 950, 966, 1140 |
| EcoRI | GAATTC | 2 cut(s) | 1318, 1995 |
| EcoRII | CCWGG | 4 cut(s) | 457, 679, 1532, 1927 |
| EcoT22I | ATGCAT | 1 cut(s) | 378 |
| EcoT38I | GRGCYC | 1 cut(s) | 82 |
| FaeI | CATG | 5 cut(s) | 376, 380, 763, 899, 1696 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 759, 791, 832, 864, 1769, 1801 |
| FaqI | GGGAC | 2 cut(s) | 199, 1754 |
| FatI | CATG | 5 cut(s) | 372, 376, 759, 895, 1692 |
| FauNDI | CATATG | 1 cut(s) | 664 |
| FbaI | TGATCA | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 5 cut(s) | 315, 515, 518, 1031, 1185 |
| FokI | GGATG | 6 cut(s) | 245, 267, 1093, 1483, 1841, 1913 |
| FriOI | GRGCYC | 1 cut(s) | 82 |
| Fsp4HI | GCNGC | 5 cut(s) | 315, 515, 518, 1031, 1185 |
| FspBI | CTAG | 2 cut(s) | 1488, 1538 |
| GlaI | GCGC | 3 cut(s) | 102, 688, 1034 |
| GluI | GCNGC | 5 cut(s) | 315, 515, 518, 1031, 1185 |
| GsuI | CTGGAG | 4 cut(s) | 143, 460, 480, 488 |
| HaeIII | GGCC | 3 cut(s) | 23, 1577, 1724 |
| HapII | CCGG | 2 cut(s) | 536, 1411 |
| HgaI | GACGC | 1 cut(s) | 1145 |
| HhaI | GCGC | 3 cut(s) | 103, 689, 1035 |
| Hin1II | CATG | 5 cut(s) | 376, 380, 763, 899, 1696 |
| Hin6I | GCGC | 3 cut(s) | 101, 687, 1033 |
| HinP1I | GCGC | 3 cut(s) | 101, 687, 1033 |
| HincII | GTYRAC | 1 cut(s) | 757 |
| HindII | GTYRAC | 1 cut(s) | 757 |
| HpaI | GTTAAC | 1 cut(s) | 757 |
| HpaII | CCGG | 2 cut(s) | 536, 1411 |
| HphI | GGTGA | 9 cut(s) | 49, 344, 1076, 1222, 1288, 1500, 1631, 1873, 1991 |
| Hpy166II | GTNNAC | 2 cut(s) | 757, 1755 |
| Hpy8I | GTNNAC | 2 cut(s) | 757, 1755 |
| HpyAV | CCTTC | 5 cut(s) | 221, 664, 923, 1884, 1979 |
| HpyCH4III | ACNGT | 2 cut(s) | 359, 938 |
| HpyCH4V | TGCA | 9 cut(s) | 9, 58, 160, 308, 376, 662, 1325, 1525, 1847 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 29, 98, 314, 1030 |
| Hsp92II | CATG | 5 cut(s) | 376, 380, 763, 899, 1696 |
| HspAI | GCGC | 3 cut(s) | 101, 687, 1033 |
| KpnI | GGTACC | 1 cut(s) | 1411 |
| Ksp22I | TGATCA | 1 cut(s) | 220 |
| KspAI | GTTAAC | 1 cut(s) | 757 |
| LguI | GCTCTTC | 1 cut(s) | 853 |
| LmnI | GCTCC | 3 cut(s) | 369, 791, 1343 |
| Lsp1109I | GCAGC | 4 cut(s) | 301, 526, 529, 1042 |
| LweI | GCATC | 6 cut(s) | 45, 129, 538, 1148, 1334, 1461 |
| MaeI | CTAG | 2 cut(s) | 1488, 1538 |
| MaeIII | GTNAC | 4 cut(s) | 359, 920, 1619, 1979 |
| MflI | RGATCY | 2 cut(s) | 1013, 1639 |
| MhlI | GDGCHC | 1 cut(s) | 82 |
| MlyI | GAGTC | 3 cut(s) | 917, 1283, 1616 |
| MmeI | TCCRAC | 4 cut(s) | 298, 425, 769, 1813 |
| Mph1103I | ATGCAT | 1 cut(s) | 378 |
| MroXI | GAANNNNTTC | 1 cut(s) | 615 |
| MseI | TTAA | 8 cut(s) | 246, 321, 498, 591, 719, 756, 1463, 1896 |
| MslI | CAYNNNNRTG | 1 cut(s) | 674 |
| MspA1I | CMGCKG | 2 cut(s) | 230, 1187 |
| MspCI | CTTAAG | 1 cut(s) | 718 |
| MspI | CCGG | 2 cut(s) | 536, 1411 |
| MspR9I | CCNGG | 5 cut(s) | 459, 537, 681, 1534, 1929 |
| MvaI | CCWGG | 4 cut(s) | 459, 681, 1534, 1929 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 29, 98, 314, 1030 |
| NciI | CCSGG | 1 cut(s) | 537 |
| NdeI | CATATG | 1 cut(s) | 664 |
| NlaIII | CATG | 5 cut(s) | 376, 380, 763, 899, 1696 |
| NlaIV | GGNNCC | 1 cut(s) | 1409 |
| NmuCI | GTSAC | 4 cut(s) | 359, 920, 1619, 1979 |
| NsiI | ATGCAT | 1 cut(s) | 378 |
| NspI | RCATGY | 3 cut(s) | 376, 763, 899 |
| OliI | CACNNNNGTG | 1 cut(s) | 674 |
| PaeI | GCATGC | 1 cut(s) | 376 |
| PaqCI | CACCTGC | 1 cut(s) | 1429 |
| PciI | ACATGT | 2 cut(s) | 759, 895 |
| PciSI | GCTCTTC | 1 cut(s) | 853 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 628 |
| PdmI | GAANNNNTTC | 1 cut(s) | 615 |
| PfeI | GAWTC | 7 cut(s) | 905, 941, 1154, 1430, 1479, 1491, 1766 |
| PfoI | TCCNGGA | 1 cut(s) | 457 |
| PkrI | GCNGC | 5 cut(s) | 316, 516, 519, 1032, 1186 |
| Ple19I | CGATCG | 1 cut(s) | 557 |
| PleI | GAGTC | 3 cut(s) | 917, 1283, 1616 |
| PpsI | GAGTC | 3 cut(s) | 917, 1283, 1616 |
| PscI | ACATGT | 2 cut(s) | 759, 895 |
| PsiI | TTATAA | 1 cut(s) | 1044 |
| Psp6I | CCWGG | 4 cut(s) | 457, 679, 1532, 1927 |
| PspGI | CCWGG | 4 cut(s) | 457, 679, 1532, 1927 |
| PspN4I | GGNNCC | 1 cut(s) | 1409 |
| PspPI | GGNCC | 3 cut(s) | 355, 1575, 1722 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1775, 1807 |
| PstNI | CAGNNNCTG | 2 cut(s) | 314, 1780 |
| PsuI | RGATCY | 2 cut(s) | 1013, 1639 |
| PvuI | CGATCG | 1 cut(s) | 557 |
| RsaI | GTAC | 4 cut(s) | 257, 596, 1409, 1754 |
| RsaNI | GTAC | 4 cut(s) | 256, 595, 1408, 1753 |
| RseI | CAYNNNNRTG | 1 cut(s) | 674 |
| SapI | GCTCTTC | 1 cut(s) | 853 |
| SaqAI | TTAA | 8 cut(s) | 246, 321, 498, 591, 719, 756, 1463, 1896 |
| SatI | GCNGC | 5 cut(s) | 315, 515, 518, 1031, 1185 |
| Sau96I | GGNCC | 3 cut(s) | 355, 1575, 1722 |
| SchI | GAGTC | 3 cut(s) | 917, 1283, 1616 |
| ScrFI | CCNGG | 5 cut(s) | 459, 537, 681, 1534, 1929 |
| SduI | GDGCHC | 1 cut(s) | 82 |
| SfaNI | GCATC | 6 cut(s) | 45, 129, 538, 1148, 1334, 1461 |
| SinI | GGWCC | 1 cut(s) | 355 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 674 |
| SmlI | CTYRAG | 3 cut(s) | 718, 1143, 1313 |
| SmoI | CTYRAG | 3 cut(s) | 718, 1143, 1313 |
| SphI | GCATGC | 1 cut(s) | 376 |
| SsiI | CCGC | 2 cut(s) | 230, 1185 |
| SspMI | CTAG | 2 cut(s) | 1488, 1538 |
| StyD4I | CCNGG | 5 cut(s) | 457, 535, 679, 1532, 1927 |
| TaaI | ACNGT | 2 cut(s) | 359, 938 |
| TaqI | TCGA | 5 cut(s) | 424, 557, 622, 1888, 2009 |
| TatI | WGTACW | 2 cut(s) | 255, 1752 |
| TauI | GCSGC | 1 cut(s) | 1187 |
| TfiI | GAWTC | 7 cut(s) | 905, 941, 1154, 1430, 1479, 1491, 1766 |
| Tru1I | TTAA | 8 cut(s) | 246, 321, 498, 591, 719, 756, 1463, 1896 |
| Tru9I | TTAA | 8 cut(s) | 246, 321, 498, 591, 719, 756, 1463, 1896 |
| TscAI | CASTG | 5 cut(s) | 916, 925, 943, 1123, 1762 |
| TseFI | GTSAC | 4 cut(s) | 359, 920, 1619, 1979 |
| TseI | GCWGC | 4 cut(s) | 314, 514, 517, 1030 |
| Tsp45I | GTSAC | 4 cut(s) | 359, 920, 1619, 1979 |
| TspDTI | ATGAA | 7 cut(s) | 269, 608, 1146, 1178, 1218, 1359, 1578 |
| TspGWI | ACGGA | 2 cut(s) | 382, 1024 |
| TspRI | CASTG | 5 cut(s) | 916, 925, 943, 1123, 1762 |
| Vha464I | CTTAAG | 1 cut(s) | 718 |
| VpaK11BI | GGWCC | 1 cut(s) | 355 |
| XapI | RAATTY | 7 cut(s) | 987, 1299, 1318, 1500, 1607, 1796, 1995 |
| XceI | RCATGY | 3 cut(s) | 376, 763, 899 |
| XmnI | GAANNNNTTC | 1 cut(s) | 615 |
| XspI | CTAG | 2 cut(s) | 1488, 1538 |
| Zsp2I | ATGCAT | 1 cut(s) | 378 |