Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06340 AT3G06340 AT3G06340 AT3G06340 AT5G18750 |
| fragaria_vesca | FvH4_2g06370 |
| malus_domestica | MD13G1174800.v1.1 MD16G1176500.v1.1 |
| prunus_persica | Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 |
| pyrus_communis | pycom13g15060 pycom13g15070 pycom16g14800 pycom16g14810 |
| rosa_chinensis | RchiOBHm_Chr4g0420721 |
| rosa_laevigata | RLG00000007740 RLG00000030269 RLG00000030290 |
| rosa_multiflora | Rmu_co8498373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00363230 |
| rosa_rugosa | Rorug04G0165700 |
| rosa_samantha | Rh4AG227200 Rh4BG230000 Rh4CG242100 Rh4DG225500 |
| rosa_wichuraiana | Rw4G019660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1158 |
| AarI | CACCTGC | 1 cut(s) | 935 |
| Acc36I | ACCTGC | 2 cut(s) | 935, 1138 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 687 |
| AccIII | TCCGGA | 1 cut(s) | 1515 |
| AciI | CCGC | 2 cut(s) | 1649, 2130 |
| AclWI | GGATC | 8 cut(s) | 1212, 1225, 1507, 2119, 2120, 2252, 2872, 2975 |
| AcoI | YGGCCR | 1 cut(s) | 1282 |
| AcuI | CTGAAG | 4 cut(s) | 359, 613, 1083, 1254 |
| AdeI | CACNNNGTG | 1 cut(s) | 2036 |
| AfaI | GTAC | 6 cut(s) | 419, 719, 895, 1904, 2185, 2805 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 598, 687, 944, 1291, 1814, 2217, 2231, 2687 |
| AflIII | ACRYGT | 1 cut(s) | 1945 |
| AjnI | CCWGG | 4 cut(s) | 97, 1637, 2032, 2250 |
| Alw21I | GWGCWC | 2 cut(s) | 1096, 1862 |
| Alw26I | GTCTC | 5 cut(s) | 788, 984, 996, 1814, 2163 |
| AlwI | GGATC | 8 cut(s) | 1212, 1225, 1507, 2119, 2120, 2252, 2872, 2975 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 476, 2114, 2348, 2651 |
| Ama87I | CYCGRG | 3 cut(s) | 1616, 2731, 2888 |
| Aor13HI | TCCGGA | 1 cut(s) | 1515 |
| AoxI | GGCC | 8 cut(s) | 73, 180, 189, 1282, 1368, 1723, 1827, 2279 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 919, 951 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 779, 921 |
| AspLEI | GCGC | 1 cut(s) | 1055 |
| AspS9I | GGNCC | 8 cut(s) | 189, 517, 935, 1651, 1723, 1827, 2208, 2279 |
| AsuHPI | GGTGA | 7 cut(s) | 434, 988, 1393, 1400, 1978, 2048, 2096 |
| AvaI | CYCGRG | 3 cut(s) | 1616, 2731, 2888 |
| AvaII | GGWCC | 4 cut(s) | 517, 935, 1651, 2208 |
| BaeGI | GKGCMC | 1 cut(s) | 701 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 2995 |
| BalI | TGGCCA | 1 cut(s) | 1284 |
| BamHI | GGATCC | 1 cut(s) | 1217 |
| BanII | GRGCYC | 1 cut(s) | 241 |
| Bbv12I | GWGCWC | 2 cut(s) | 1096, 1862 |
| BbvCI | CCTCAGC | 3 cut(s) | 843, 1929, 2151 |
| BciT130I | CCWGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| BclI | TGATCA | 1 cut(s) | 382 |
| BcoDI | GTCTC | 5 cut(s) | 788, 984, 996, 1814, 2163 |
| BfaI | CTAG | 5 cut(s) | 1122, 1593, 2202, 2472, 2636 |
| BfoI | RGCGCY | 1 cut(s) | 1056 |
| BfuAI | ACCTGC | 2 cut(s) | 935, 1138 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 188, 2964 |
| BglII | AGATCT | 2 cut(s) | 1127, 2403 |
| Bme1390I | CCNGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| Bme18I | GGWCC | 4 cut(s) | 517, 935, 1651, 2208 |
| BmeT110I | CYCGRG | 3 cut(s) | 1616, 2731, 2888 |
| BmgT120I | GGNCC | 8 cut(s) | 189, 517, 935, 1651, 1723, 1827, 2208, 2279 |
| BmiI | GGNNCC | 3 cut(s) | 1219, 1653, 2280 |
| BmrFI | CCNGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| BmsI | GCATC | 7 cut(s) | 288, 1240, 1442, 1566, 2302, 2356, 2547 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2038, 2070 |
| BpmI | CTGGAG | 3 cut(s) | 133, 302, 1664 |
| Bpu10I | CCTNAGC | 4 cut(s) | 140, 843, 1929, 2151 |
| BsaAI | YACGTR | 1 cut(s) | 1946 |
| BsaJI | CCNNGG | 4 cut(s) | 98, 192, 2251, 2889 |
| BsaWI | WCCGGW | 3 cut(s) | 464, 981, 1515 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2085, 2115 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 598, 687, 944, 1291, 1814, 2217, 2231, 2687 |
| Bse1I | ACTGG | 8 cut(s) | 365, 721, 1026, 1726, 1847, 1859, 2187, 2720 |
| Bse3DI | GCAATG | 2 cut(s) | 319, 783 |
| BseAI | TCCGGA | 1 cut(s) | 1515 |
| BseBI | CCWGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| BseDI | CCNNGG | 4 cut(s) | 98, 192, 2251, 2889 |
| BseGI | GGATG | 5 cut(s) | 1093, 1581, 2066, 2830, 2883 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 598, 687, 944, 1291, 1814, 2217, 2231, 2687 |
| BseMI | GCAATG | 2 cut(s) | 319, 783 |
| BseNI | ACTGG | 8 cut(s) | 365, 721, 1026, 1726, 1847, 1859, 2187, 2720 |
| BseRI | GAGGAG | 2 cut(s) | 1225, 1277 |
| BseSI | GKGCMC | 1 cut(s) | 701 |
| BseYI | CCCAGC | 1 cut(s) | 592 |
| BsgI | GTGCAG | 4 cut(s) | 489, 599, 728, 1116 |
| BshFI | GGCC | 8 cut(s) | 75, 182, 191, 1284, 1370, 1725, 1829, 2281 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1096, 1862 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1616, 2731, 2888 |
| BsiSI | CCGG | 4 cut(s) | 465, 982, 1516, 2932 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 598, 687, 944, 1291, 1814, 2217, 2231, 2687 |
| BsmAI | GTCTC | 5 cut(s) | 788, 984, 996, 1814, 2163 |
| BsmI | GAATGC | 2 cut(s) | 369, 2516 |
| BsnI | GGCC | 8 cut(s) | 75, 182, 191, 1284, 1370, 1725, 1829, 2281 |
| BsoBI | CYCGRG | 3 cut(s) | 1616, 2731, 2888 |
| Bsp1286I | GDGCHC | 4 cut(s) | 241, 701, 1096, 1862 |
| Bsp13I | TCCGGA | 1 cut(s) | 1515 |
| BspACI | CCGC | 2 cut(s) | 1649, 2130 |
| BspANI | GGCC | 8 cut(s) | 75, 182, 191, 1284, 1370, 1725, 1829, 2281 |
| BspEI | TCCGGA | 1 cut(s) | 1515 |
| BspHI | TCATGA | 3 cut(s) | 1420, 2308, 2317 |
| BspLI | GGNNCC | 3 cut(s) | 1219, 1653, 2280 |
| BspMI | ACCTGC | 2 cut(s) | 935, 1138 |
| BspPI | GGATC | 8 cut(s) | 1212, 1225, 1507, 2119, 2120, 2252, 2872, 2975 |
| BsrDI | GCAATG | 2 cut(s) | 319, 783 |
| BsrI | ACTGG | 8 cut(s) | 365, 721, 1026, 1726, 1847, 1859, 2187, 2720 |
| BssECI | CCNNGG | 4 cut(s) | 98, 192, 2251, 2889 |
| BssT1I | CCWWGG | 1 cut(s) | 192 |
| Bst2UI | CCWGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| Bst4CI | ACNGT | 5 cut(s) | 521, 893, 1473, 2420, 2786 |
| Bst6I | CTCTTC | 5 cut(s) | 171, 980, 1202, 2547, 2937 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 476 |
| BstBAI | YACGTR | 1 cut(s) | 1946 |
| BstC8I | GCNNGC | 3 cut(s) | 807, 834, 2435 |
| BstF5I | GGATG | 5 cut(s) | 1093, 1581, 2066, 2830, 2883 |
| BstH2I | RGCGCY | 1 cut(s) | 1056 |
| BstHHI | GCGC | 1 cut(s) | 1055 |
| BstMAI | GTCTC | 5 cut(s) | 788, 984, 996, 1814, 2163 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 188, 476, 673, 676, 815, 2964 |
| BstNI | CCWGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| BstNSI | RCATGY | 1 cut(s) | 538 |
| BstSCI | CCNGG | 4 cut(s) | 97, 1637, 2032, 2250 |
| BstSLI | GKGCMC | 1 cut(s) | 701 |
| BstX2I | RGATCY | 5 cut(s) | 1127, 1217, 1512, 2111, 2403 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1378 |
| BstYI | RGATCY | 5 cut(s) | 1127, 1217, 1512, 2111, 2403 |
| BsuRI | GGCC | 8 cut(s) | 75, 182, 191, 1284, 1370, 1725, 1829, 2281 |
| BtsCI | GGATG | 5 cut(s) | 1093, 1581, 2066, 2830, 2883 |
| BtsI | GCAGTG | 1 cut(s) | 1042 |
| BtsIMutI | CAGTG | 7 cut(s) | 1033, 1042, 1230, 1469, 2194, 2425, 2791 |
| BveI | ACCTGC | 2 cut(s) | 935, 1138 |
| Cac8I | GCNNGC | 3 cut(s) | 807, 834, 2435 |
| CaiI | CAGNNNCTG | 4 cut(s) | 476, 2114, 2348, 2651 |
| CciI | TCATGA | 3 cut(s) | 1420, 2308, 2317 |
| CfoI | GCGC | 1 cut(s) | 1055 |
| Cfr13I | GGNCC | 8 cut(s) | 189, 517, 935, 1651, 1723, 1827, 2208, 2279 |
| CsiI | ACCWGGT | 1 cut(s) | 2032 |
| Csp6I | GTAC | 6 cut(s) | 418, 718, 894, 1903, 2184, 2804 |
| CviQI | GTAC | 6 cut(s) | 418, 718, 894, 1903, 2184, 2804 |
| DraI | TTTAAA | 3 cut(s) | 1534, 2074, 2845 |
| DraIII | CACNNNGTG | 1 cut(s) | 2036 |
| EaeI | YGGCCR | 1 cut(s) | 1282 |
| Eam1104I | CTCTTC | 5 cut(s) | 171, 980, 1202, 2547, 2937 |
| EarI | CTCTTC | 5 cut(s) | 171, 980, 1202, 2547, 2937 |
| EciI | GGCGGA | 1 cut(s) | 1664 |
| Eco130I | CCWWGG | 1 cut(s) | 192 |
| Eco147I | AGGCCT | 1 cut(s) | 75 |
| Eco24I | GRGCYC | 1 cut(s) | 241 |
| Eco32I | GATATC | 3 cut(s) | 1770, 2674, 2728 |
| Eco47I | GGWCC | 4 cut(s) | 517, 935, 1651, 2208 |
| Eco57I | CTGAAG | 4 cut(s) | 359, 613, 1083, 1254 |
| Eco88I | CYCGRG | 3 cut(s) | 1616, 2731, 2888 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2279 |
| EcoRI | GAATTC | 2 cut(s) | 610, 1426 |
| EcoRII | CCWGG | 4 cut(s) | 97, 1637, 2032, 2250 |
| EcoRV | GATATC | 3 cut(s) | 1770, 2674, 2728 |
| EcoT14I | CCWWGG | 1 cut(s) | 192 |
| EcoT22I | ATGCAT | 1 cut(s) | 540 |
| EcoT38I | GRGCYC | 1 cut(s) | 241 |
| ErhI | CCWWGG | 1 cut(s) | 192 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 764, 796 |
| FauI | CCCGC | 1 cut(s) | 2137 |
| FauNDI | CATATG | 1 cut(s) | 790 |
| FbaI | TGATCA | 1 cut(s) | 382 |
| FokI | GGATG | 5 cut(s) | 1100, 1588, 2053, 2837, 2870 |
| FriOI | GRGCYC | 1 cut(s) | 241 |
| FspBI | CTAG | 5 cut(s) | 1122, 1593, 2202, 2472, 2636 |
| GlaI | GCGC | 1 cut(s) | 1054 |
| GsaI | CCCAGC | 1 cut(s) | 596 |
| GsuI | CTGGAG | 3 cut(s) | 133, 302, 1664 |
| HaeII | RGCGCY | 1 cut(s) | 1056 |
| HaeIII | GGCC | 8 cut(s) | 75, 182, 191, 1284, 1370, 1725, 1829, 2281 |
| HapII | CCGG | 4 cut(s) | 465, 982, 1516, 2932 |
| HhaI | GCGC | 1 cut(s) | 1055 |
| Hin6I | GCGC | 1 cut(s) | 1053 |
| HinP1I | GCGC | 1 cut(s) | 1053 |
| HpaII | CCGG | 4 cut(s) | 465, 982, 1516, 2932 |
| HphI | GGTGA | 7 cut(s) | 434, 988, 1393, 1400, 1978, 2048, 2096 |
| Hpy166II | GTNNAC | 2 cut(s) | 979, 1852 |
| Hpy8I | GTNNAC | 2 cut(s) | 979, 1852 |
| HpyCH4III | ACNGT | 5 cut(s) | 521, 893, 1473, 2420, 2786 |
| HpyCH4IV | ACGT | 4 cut(s) | 529, 1905, 1945, 2018 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 188, 476, 673, 676, 815, 2964 |
| HpySE526I | ACGT | 4 cut(s) | 529, 1905, 1945, 2018 |
| HspAI | GCGC | 1 cut(s) | 1053 |
| Kpn2I | TCCGGA | 1 cut(s) | 1515 |
| Ksp22I | TGATCA | 1 cut(s) | 382 |
| LmnI | GCTCC | 3 cut(s) | 1114, 1451, 1618 |
| LweI | GCATC | 7 cut(s) | 288, 1240, 1442, 1566, 2302, 2356, 2547 |
| MabI | ACCWGGT | 1 cut(s) | 2032 |
| MaeI | CTAG | 5 cut(s) | 1122, 1593, 2202, 2472, 2636 |
| MaeII | ACGT | 4 cut(s) | 529, 1905, 1945, 2018 |
| MaeIII | GTNAC | 4 cut(s) | 521, 530, 1037, 2753 |
| MfeI | CAATTG | 4 cut(s) | 10, 52, 60, 2331 |
| MflI | RGATCY | 5 cut(s) | 1127, 1217, 1512, 2111, 2403 |
| MhlI | GDGCHC | 4 cut(s) | 241, 701, 1096, 1862 |
| MlsI | TGGCCA | 1 cut(s) | 1284 |
| MluNI | TGGCCA | 1 cut(s) | 1284 |
| MlyI | GAGTC | 6 cut(s) | 13, 142, 1034, 1052, 1865, 2713 |
| MmeI | TCCRAC | 3 cut(s) | 460, 587, 1918 |
| Mox20I | TGGCCA | 1 cut(s) | 1284 |
| Mph1103I | ATGCAT | 1 cut(s) | 540 |
| MroI | TCCGGA | 1 cut(s) | 1515 |
| MroXI | GAANNNNTTC | 2 cut(s) | 779, 921 |
| MscI | TGGCCA | 1 cut(s) | 1284 |
| Msp20I | TGGCCA | 1 cut(s) | 1284 |
| MspA1I | CMGCKG | 1 cut(s) | 2870 |
| MspI | CCGG | 4 cut(s) | 465, 982, 1516, 2932 |
| MspR9I | CCNGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| MunI | CAATTG | 4 cut(s) | 10, 52, 60, 2331 |
| Mva1269I | GAATGC | 2 cut(s) | 369, 2516 |
| MvaI | CCWGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 188, 476, 673, 676, 815, 2964 |
| NdeI | CATATG | 1 cut(s) | 790 |
| NlaIV | GGNNCC | 3 cut(s) | 1219, 1653, 2280 |
| NmuCI | GTSAC | 3 cut(s) | 521, 1037, 2753 |
| NsiI | ATGCAT | 1 cut(s) | 540 |
| NspI | RCATGY | 1 cut(s) | 538 |
| PaeR7I | CTCGAG | 1 cut(s) | 2731 |
| PagI | TCATGA | 3 cut(s) | 1420, 2308, 2317 |
| PaqCI | CACCTGC | 1 cut(s) | 935 |
| PceI | AGGCCT | 1 cut(s) | 75 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2775 |
| PctI | GAATGC | 2 cut(s) | 369, 2516 |
| PdmI | GAANNNNTTC | 2 cut(s) | 779, 921 |
| PfeI | GAWTC | 8 cut(s) | 84, 652, 917, 1268, 1352, 2468, 2593, 2612 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 687 |
| PleI | GAGTC | 6 cut(s) | 12, 141, 1034, 1052, 1865, 2713 |
| PpsI | GAGTC | 6 cut(s) | 12, 141, 1034, 1052, 1865, 2713 |
| Ppu21I | YACGTR | 1 cut(s) | 1946 |
| PsiI | TTATAA | 1 cut(s) | 1158 |
| Psp6I | CCWGG | 4 cut(s) | 97, 1637, 2032, 2250 |
| PspFI | CCCAGC | 1 cut(s) | 592 |
| PspGI | CCWGG | 4 cut(s) | 97, 1637, 2032, 2250 |
| PspN4I | GGNNCC | 3 cut(s) | 1219, 1653, 2280 |
| PspPI | GGNCC | 8 cut(s) | 189, 517, 935, 1651, 1723, 1827, 2208, 2279 |
| PstNI | CAGNNNCTG | 4 cut(s) | 476, 2114, 2348, 2651 |
| PsuI | RGATCY | 5 cut(s) | 1127, 1217, 1512, 2111, 2403 |
| PvuII | CAGCTG | 1 cut(s) | 2870 |
| RsaI | GTAC | 6 cut(s) | 419, 719, 895, 1904, 2185, 2805 |
| RsaNI | GTAC | 6 cut(s) | 418, 718, 894, 1903, 2184, 2804 |
| Sau96I | GGNCC | 8 cut(s) | 189, 517, 935, 1651, 1723, 1827, 2208, 2279 |
| SchI | GAGTC | 6 cut(s) | 13, 142, 1034, 1052, 1865, 2713 |
| ScrFI | CCNGG | 4 cut(s) | 99, 1639, 2034, 2252 |
| SduI | GDGCHC | 4 cut(s) | 241, 701, 1096, 1862 |
| SexAI | ACCWGGT | 1 cut(s) | 2032 |
| SfaNI | GCATC | 7 cut(s) | 288, 1240, 1442, 1566, 2302, 2356, 2547 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 188 |
| Sfr274I | CTCGAG | 1 cut(s) | 2731 |
| SinI | GGWCC | 4 cut(s) | 517, 935, 1651, 2208 |
| SlaI | CTCGAG | 1 cut(s) | 2731 |
| SmlI | CTYRAG | 1 cut(s) | 2731 |
| SmoI | CTYRAG | 1 cut(s) | 2731 |
| SseBI | AGGCCT | 1 cut(s) | 75 |
| SsiI | CCGC | 2 cut(s) | 1649, 2130 |
| SspI | AATATT | 1 cut(s) | 619 |
| SspMI | CTAG | 5 cut(s) | 1122, 1593, 2202, 2472, 2636 |
| StuI | AGGCCT | 1 cut(s) | 75 |
| StyD4I | CCNGG | 4 cut(s) | 97, 1637, 2032, 2250 |
| StyI | CCWWGG | 1 cut(s) | 192 |
| TaaI | ACNGT | 5 cut(s) | 521, 893, 1473, 2420, 2786 |
| TaiI | ACGT | 4 cut(s) | 532, 1908, 1948, 2021 |
| TaqI | TCGA | 5 cut(s) | 586, 2364, 2534, 2732, 2769 |
| TatI | WGTACW | 2 cut(s) | 417, 893 |
| TfiI | GAWTC | 8 cut(s) | 84, 652, 917, 1268, 1352, 2468, 2593, 2612 |
| TscAI | CASTG | 7 cut(s) | 1033, 1042, 1237, 1476, 2194, 2425, 2791 |
| TseFI | GTSAC | 3 cut(s) | 521, 1037, 2753 |
| Tsp45I | GTSAC | 3 cut(s) | 521, 1037, 2753 |
| TspGWI | ACGGA | 3 cut(s) | 1100, 1150, 1535 |
| TspRI | CASTG | 7 cut(s) | 1033, 1042, 1237, 1476, 2194, 2425, 2791 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 687 |
| VpaK11BI | GGWCC | 4 cut(s) | 517, 935, 1651, 2208 |
| XbaI | TCTAGA | 1 cut(s) | 2201 |
| XceI | RCATGY | 1 cut(s) | 538 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 157 |
| XhoI | CTCGAG | 1 cut(s) | 2731 |
| XmnI | GAANNNNTTC | 2 cut(s) | 779, 921 |
| XspI | CTAG | 5 cut(s) | 1122, 1593, 2202, 2472, 2636 |
| Zsp2I | ATGCAT | 1 cut(s) | 540 |