Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06340 AT3G06340 AT3G06340 AT3G06340 AT5G18750 |
| fragaria_vesca | FvH4_2g06370 |
| malus_domestica | MD13G1174800.v1.1 MD16G1176500.v1.1 |
| prunus_persica | Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 |
| pyrus_communis | pycom13g15060 pycom13g15070 pycom16g14800 pycom16g14810 |
| rosa_chinensis | RchiOBHm_Chr4g0420721 |
| rosa_laevigata | RLG00000007740 RLG00000030269 RLG00000030290 |
| rosa_multiflora | Rmu_co8498373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00363230 |
| rosa_rugosa | Rorug04G0165700 |
| rosa_samantha | Rh4AG227200 Rh4BG230000 Rh4CG242100 Rh4DG225500 |
| rosa_wichuraiana | Rw4G019660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 158 |
| Acc36I | ACCTGC | 1 cut(s) | 138 |
| AccB1I | GGYRCC | 1 cut(s) | 52 |
| AccIII | TCCGGA | 1 cut(s) | 515 |
| AciI | CCGC | 4 cut(s) | 50, 649, 1130, 1645 |
| AclWI | GGATC | 9 cut(s) | 122, 212, 225, 507, 1119, 1120, 1252, 1872, 1975 |
| AcoI | YGGCCR | 1 cut(s) | 282 |
| AcsI | RAATTY | 9 cut(s) | 426, 712, 911, 1272, 1351, 1387, 1530, 1576, 1666 |
| AcuI | CTGAAG | 2 cut(s) | 83, 254 |
| AcyI | GRCGYC | 1 cut(s) | 53 |
| AdeI | CACNNNGTG | 1 cut(s) | 1036 |
| AfaI | GTAC | 4 cut(s) | 904, 1185, 1417, 1805 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 291, 661, 814, 1231, 1687, 1688 |
| AflIII | ACRYGT | 1 cut(s) | 945 |
| AjnI | CCWGG | 3 cut(s) | 637, 1032, 1250 |
| AluBI | AGCT | 7 cut(s) | 446, 546, 1122, 1243, 1517, 1870, 1899 |
| AluI | AGCT | 7 cut(s) | 446, 546, 1122, 1243, 1517, 1870, 1899 |
| Alw21I | GWGCWC | 1 cut(s) | 862 |
| Alw26I | GTCTC | 2 cut(s) | 814, 1163 |
| AlwI | GGATC | 9 cut(s) | 122, 212, 225, 507, 1119, 1120, 1252, 1872, 1975 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1114, 1348 |
| Ama87I | CYCGRG | 1 cut(s) | 616 |
| Aor13HI | TCCGGA | 1 cut(s) | 515 |
| AoxI | GGCC | 5 cut(s) | 282, 368, 723, 827, 1279 |
| ApeKI | GCWGC | 6 cut(s) | 144, 543, 1514, 1955, 1967, 1987 |
| ApoI | RAATTY | 9 cut(s) | 426, 712, 911, 1272, 1351, 1387, 1530, 1576, 1666 |
| AspA2I | CCTAGG | 1 cut(s) | 121 |
| AspLEI | GCGC | 1 cut(s) | 55 |
| AspS9I | GGNCC | 3 cut(s) | 651, 827, 1279 |
| AsuHPI | GGTGA | 5 cut(s) | 393, 400, 978, 1048, 1096 |
| AvaI | CYCGRG | 1 cut(s) | 616 |
| AvaII | GGWCC | 1 cut(s) | 651 |
| AvrII | CCTAGG | 1 cut(s) | 121 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 1995 |
| BalI | TGGCCA | 1 cut(s) | 284 |
| BamHI | GGATCC | 1 cut(s) | 217 |
| BanI | GGYRCC | 1 cut(s) | 52 |
| Bbv12I | GWGCWC | 1 cut(s) | 862 |
| BbvCI | CCTCAGC | 2 cut(s) | 929, 1151 |
| BbvI | GCAGC | 6 cut(s) | 156, 555, 1526, 1954, 1967, 1974 |
| BciT130I | CCWGG | 3 cut(s) | 639, 1034, 1252 |
| BcoDI | GTCTC | 2 cut(s) | 814, 1163 |
| BfaI | CTAG | 5 cut(s) | 122, 593, 1202, 1472, 1636 |
| BfoI | RGCGCY | 1 cut(s) | 56 |
| BfuAI | ACCTGC | 1 cut(s) | 138 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1964 |
| BglII | AGATCT | 2 cut(s) | 127, 1403 |
| BisI | GCNGC | 7 cut(s) | 51, 145, 544, 1515, 1956, 1968, 1988 |
| BlnI | CCTAGG | 1 cut(s) | 121 |
| BlsI | GCNGC | 7 cut(s) | 52, 146, 545, 1516, 1957, 1969, 1989 |
| Bme1390I | CCNGG | 3 cut(s) | 639, 1034, 1252 |
| Bme18I | GGWCC | 1 cut(s) | 651 |
| BmeT110I | CYCGRG | 1 cut(s) | 616 |
| BmgT120I | GGNCC | 3 cut(s) | 651, 827, 1279 |
| BmiI | GGNNCC | 5 cut(s) | 54, 219, 653, 1280, 1649 |
| BmrFI | CCNGG | 3 cut(s) | 639, 1034, 1252 |
| BmsI | GCATC | 6 cut(s) | 240, 442, 566, 1302, 1356, 1547 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1038, 1070 |
| BpmI | CTGGAG | 1 cut(s) | 664 |
| Bpu10I | CCTNAGC | 2 cut(s) | 929, 1151 |
| BsaAI | YACGTR | 1 cut(s) | 946 |
| BsaHI | GRCGYC | 1 cut(s) | 53 |
| BsaJI | CCNNGG | 3 cut(s) | 121, 1251, 1889 |
| BsaWI | WCCGGW | 1 cut(s) | 515 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1085, 1115 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 291, 661, 814, 1231, 1687, 1688 |
| Bse1I | ACTGG | 7 cut(s) | 26, 726, 847, 859, 1086, 1187, 1720 |
| BseAI | TCCGGA | 1 cut(s) | 515 |
| BseBI | CCWGG | 3 cut(s) | 639, 1034, 1252 |
| BseDI | CCNNGG | 3 cut(s) | 121, 1251, 1889 |
| BseGI | GGATG | 4 cut(s) | 93, 581, 1066, 1830 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 291, 661, 814, 1231, 1687, 1688 |
| BseMII | CTCAG | 5 cut(s) | 281, 920, 1142, 1850, 1917 |
| BseNI | ACTGG | 7 cut(s) | 26, 726, 847, 859, 1086, 1187, 1720 |
| BseRI | GAGGAG | 2 cut(s) | 225, 277 |
| BseXI | GCAGC | 6 cut(s) | 156, 555, 1526, 1954, 1967, 1974 |
| BseYI | CCCAGC | 1 cut(s) | 1970 |
| BsgI | GTGCAG | 2 cut(s) | 35, 116 |
| BshFI | GGCC | 5 cut(s) | 284, 370, 725, 829, 1281 |
| BshNI | GGYRCC | 1 cut(s) | 52 |
| BsiHKAI | GWGCWC | 1 cut(s) | 862 |
| BsiHKCI | CYCGRG | 1 cut(s) | 616 |
| BsiSI | CCGG | 2 cut(s) | 516, 1932 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 291, 661, 814, 1231, 1687, 1688 |
| BsmAI | GTCTC | 2 cut(s) | 814, 1163 |
| BsmI | GAATGC | 2 cut(s) | 1516, 1919 |
| BsnI | GGCC | 5 cut(s) | 284, 370, 725, 829, 1281 |
| BsoBI | CYCGRG | 1 cut(s) | 616 |
| Bsp1286I | GDGCHC | 1 cut(s) | 862 |
| Bsp13I | TCCGGA | 1 cut(s) | 515 |
| Bsp1407I | TGTACA | 1 cut(s) | 1415 |
| BspACI | CCGC | 4 cut(s) | 50, 649, 1130, 1645 |
| BspANI | GGCC | 5 cut(s) | 284, 370, 725, 829, 1281 |
| BspCNI | CTCAG | 5 cut(s) | 282, 921, 1143, 1849, 1916 |
| BspEI | TCCGGA | 1 cut(s) | 515 |
| BspHI | TCATGA | 3 cut(s) | 420, 1308, 1317 |
| BspLI | GGNNCC | 5 cut(s) | 54, 219, 653, 1280, 1649 |
| BspMI | ACCTGC | 1 cut(s) | 138 |
| BspPI | GGATC | 9 cut(s) | 122, 212, 225, 507, 1119, 1120, 1252, 1872, 1975 |
| BspT107I | GGYRCC | 1 cut(s) | 52 |
| BsrGI | TGTACA | 1 cut(s) | 1415 |
| BsrI | ACTGG | 7 cut(s) | 26, 726, 847, 859, 1086, 1187, 1720 |
| BssECI | CCNNGG | 3 cut(s) | 121, 1251, 1889 |
| BssNI | GRCGYC | 1 cut(s) | 53 |
| BssT1I | CCWWGG | 2 cut(s) | 121, 1889 |
| Bst2UI | CCWGG | 3 cut(s) | 639, 1034, 1252 |
| Bst4CI | ACNGT | 2 cut(s) | 473, 1420 |
| Bst6I | CTCTTC | 4 cut(s) | 202, 344, 1547, 1937 |
| BstACI | GRCGYC | 1 cut(s) | 53 |
| BstAUI | TGTACA | 1 cut(s) | 1415 |
| BstBAI | YACGTR | 1 cut(s) | 946 |
| BstC8I | GCNNGC | 2 cut(s) | 14, 1435 |
| BstDEI | CTNAG | 7 cut(s) | 169, 290, 929, 1151, 1836, 1903, 1960 |
| BstF5I | GGATG | 4 cut(s) | 93, 581, 1066, 1830 |
| BstH2I | RGCGCY | 1 cut(s) | 56 |
| BstHHI | GCGC | 1 cut(s) | 55 |
| BstMAI | GTCTC | 2 cut(s) | 814, 1163 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 22, 1964 |
| BstNI | CCWGG | 3 cut(s) | 639, 1034, 1252 |
| BstSCI | CCNGG | 3 cut(s) | 637, 1032, 1250 |
| BstV1I | GCAGC | 6 cut(s) | 156, 555, 1526, 1954, 1967, 1974 |
| BstX2I | RGATCY | 5 cut(s) | 127, 217, 512, 1111, 1403 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 378 |
| BstYI | RGATCY | 5 cut(s) | 127, 217, 512, 1111, 1403 |
| BsuRI | GGCC | 5 cut(s) | 284, 370, 725, 829, 1281 |
| BtsCI | GGATG | 4 cut(s) | 93, 581, 1066, 1830 |
| BtsI | GCAGTG | 1 cut(s) | 42 |
| BtsIMutI | CAGTG | 6 cut(s) | 33, 42, 230, 469, 1194, 1425 |
| BveI | ACCTGC | 1 cut(s) | 138 |
| Cac8I | GCNNGC | 2 cut(s) | 14, 1435 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1114, 1348 |
| CciI | TCATGA | 3 cut(s) | 420, 1308, 1317 |
| CfoI | GCGC | 1 cut(s) | 55 |
| Cfr13I | GGNCC | 3 cut(s) | 651, 827, 1279 |
| CsiI | ACCWGGT | 1 cut(s) | 1032 |
| Csp6I | GTAC | 4 cut(s) | 903, 1184, 1416, 1804 |
| CviAII | CATG | 7 cut(s) | 224, 421, 451, 1309, 1318, 1502, 1620 |
| CviQI | GTAC | 4 cut(s) | 903, 1184, 1416, 1804 |
| DdeI | CTNAG | 7 cut(s) | 169, 290, 929, 1151, 1836, 1903, 1960 |
| DinI | GGCGCC | 1 cut(s) | 54 |
| DraI | TTTAAA | 3 cut(s) | 534, 1074, 1845 |
| DraIII | CACNNNGTG | 1 cut(s) | 1036 |
| EaeI | YGGCCR | 1 cut(s) | 282 |
| Eam1104I | CTCTTC | 4 cut(s) | 202, 344, 1547, 1937 |
| EarI | CTCTTC | 4 cut(s) | 202, 344, 1547, 1937 |
| EciI | GGCGGA | 1 cut(s) | 664 |
| Eco130I | CCWWGG | 2 cut(s) | 121, 1889 |
| Eco32I | GATATC | 3 cut(s) | 770, 1674, 1728 |
| Eco47I | GGWCC | 1 cut(s) | 651 |
| Eco57I | CTGAAG | 2 cut(s) | 83, 254 |
| Eco88I | CYCGRG | 1 cut(s) | 616 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1279 |
| EcoRI | GAATTC | 1 cut(s) | 426 |
| EcoRII | CCWGG | 3 cut(s) | 637, 1032, 1250 |
| EcoRV | GATATC | 3 cut(s) | 770, 1674, 1728 |
| EcoT14I | CCWWGG | 2 cut(s) | 121, 1889 |
| EgeI | GGCGCC | 1 cut(s) | 54 |
| EheI | GGCGCC | 1 cut(s) | 54 |
| ErhI | CCWWGG | 2 cut(s) | 121, 1889 |
| FaeI | CATG | 7 cut(s) | 227, 424, 454, 1312, 1321, 1505, 1623 |
| FatI | CATG | 7 cut(s) | 223, 420, 450, 1308, 1317, 1501, 1619 |
| FauI | CCCGC | 1 cut(s) | 1137 |
| Fnu4HI | GCNGC | 7 cut(s) | 51, 145, 544, 1515, 1956, 1968, 1988 |
| FokI | GGATG | 4 cut(s) | 100, 588, 1053, 1837 |
| Fsp4HI | GCNGC | 7 cut(s) | 51, 145, 544, 1515, 1956, 1968, 1988 |
| FspBI | CTAG | 5 cut(s) | 122, 593, 1202, 1472, 1636 |
| GlaI | GCGC | 1 cut(s) | 54 |
| GluI | GCNGC | 7 cut(s) | 51, 145, 544, 1515, 1956, 1968, 1988 |
| GsaI | CCCAGC | 1 cut(s) | 1974 |
| GsuI | CTGGAG | 1 cut(s) | 664 |
| HaeII | RGCGCY | 1 cut(s) | 56 |
| HaeIII | GGCC | 5 cut(s) | 284, 370, 725, 829, 1281 |
| HapII | CCGG | 2 cut(s) | 516, 1932 |
| HhaI | GCGC | 1 cut(s) | 55 |
| Hin1I | GRCGYC | 1 cut(s) | 53 |
| Hin1II | CATG | 7 cut(s) | 227, 424, 454, 1312, 1321, 1505, 1623 |
| Hin6I | GCGC | 1 cut(s) | 53 |
| HinP1I | GCGC | 1 cut(s) | 53 |
| HinfI | GANTC | 9 cut(s) | 40, 58, 268, 352, 871, 1468, 1593, 1612, 1719 |
| HpaII | CCGG | 2 cut(s) | 516, 1932 |
| HphI | GGTGA | 5 cut(s) | 393, 400, 978, 1048, 1096 |
| Hpy166II | GTNNAC | 1 cut(s) | 852 |
| Hpy8I | GTNNAC | 1 cut(s) | 852 |
| HpyAV | CCTTC | 5 cut(s) | 354, 957, 1000, 1084, 1934 |
| HpyCH4III | ACNGT | 2 cut(s) | 473, 1420 |
| HpyCH4IV | ACGT | 3 cut(s) | 905, 945, 1018 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 22, 1964 |
| HpyF3I | CTNAG | 7 cut(s) | 169, 290, 929, 1151, 1836, 1903, 1960 |
| HpySE526I | ACGT | 3 cut(s) | 905, 945, 1018 |
| Hsp92I | GRCGYC | 1 cut(s) | 53 |
| Hsp92II | CATG | 7 cut(s) | 227, 424, 454, 1312, 1321, 1505, 1623 |
| HspAI | GCGC | 1 cut(s) | 53 |
| KasI | GGCGCC | 1 cut(s) | 52 |
| Kpn2I | TCCGGA | 1 cut(s) | 515 |
| LmnI | GCTCC | 2 cut(s) | 451, 618 |
| Lsp1109I | GCAGC | 6 cut(s) | 156, 555, 1526, 1954, 1967, 1974 |
| LweI | GCATC | 6 cut(s) | 240, 442, 566, 1302, 1356, 1547 |
| MabI | ACCWGGT | 1 cut(s) | 1032 |
| MaeI | CTAG | 5 cut(s) | 122, 593, 1202, 1472, 1636 |
| MaeII | ACGT | 3 cut(s) | 905, 945, 1018 |
| MaeIII | GTNAC | 2 cut(s) | 37, 1753 |
| MfeI | CAATTG | 2 cut(s) | 876, 1331 |
| MflI | RGATCY | 5 cut(s) | 127, 217, 512, 1111, 1403 |
| MhlI | GDGCHC | 1 cut(s) | 862 |
| MlsI | TGGCCA | 1 cut(s) | 284 |
| MluNI | TGGCCA | 1 cut(s) | 284 |
| Mly113I | GGCGCC | 1 cut(s) | 53 |
| MlyI | GAGTC | 5 cut(s) | 34, 52, 361, 865, 1713 |
| MmeI | TCCRAC | 1 cut(s) | 918 |
| Mox20I | TGGCCA | 1 cut(s) | 284 |
| MroI | TCCGGA | 1 cut(s) | 515 |
| MscI | TGGCCA | 1 cut(s) | 284 |
| Msp20I | TGGCCA | 1 cut(s) | 284 |
| MspA1I | CMGCKG | 1 cut(s) | 1870 |
| MspI | CCGG | 2 cut(s) | 516, 1932 |
| MspR9I | CCNGG | 3 cut(s) | 639, 1034, 1252 |
| MunI | CAATTG | 2 cut(s) | 876, 1331 |
| Mva1269I | GAATGC | 2 cut(s) | 1516, 1919 |
| MvaI | CCWGG | 3 cut(s) | 639, 1034, 1252 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 22, 1964 |
| NarI | GGCGCC | 1 cut(s) | 53 |
| NlaIII | CATG | 7 cut(s) | 227, 424, 454, 1312, 1321, 1505, 1623 |
| NlaIV | GGNNCC | 5 cut(s) | 54, 219, 653, 1280, 1649 |
| NmuCI | GTSAC | 2 cut(s) | 37, 1753 |
| PagI | TCATGA | 3 cut(s) | 420, 1308, 1317 |
| PctI | GAATGC | 2 cut(s) | 1516, 1919 |
| PfeI | GAWTC | 4 cut(s) | 268, 1468, 1593, 1612 |
| PkrI | GCNGC | 7 cut(s) | 52, 146, 545, 1516, 1957, 1969, 1989 |
| PleI | GAGTC | 5 cut(s) | 34, 52, 360, 865, 1713 |
| PluTI | GGCGCC | 1 cut(s) | 56 |
| PpsI | GAGTC | 5 cut(s) | 34, 52, 360, 865, 1713 |
| Ppu21I | YACGTR | 1 cut(s) | 946 |
| PsiI | TTATAA | 1 cut(s) | 158 |
| Psp6I | CCWGG | 3 cut(s) | 637, 1032, 1250 |
| PspFI | CCCAGC | 1 cut(s) | 1970 |
| PspGI | CCWGG | 3 cut(s) | 637, 1032, 1250 |
| PspN4I | GGNNCC | 5 cut(s) | 54, 219, 653, 1280, 1649 |
| PspPI | GGNCC | 3 cut(s) | 651, 827, 1279 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1114, 1348 |
| PsuI | RGATCY | 5 cut(s) | 127, 217, 512, 1111, 1403 |
| PvuII | CAGCTG | 1 cut(s) | 1870 |
| RsaI | GTAC | 4 cut(s) | 904, 1185, 1417, 1805 |
| RsaNI | GTAC | 4 cut(s) | 903, 1184, 1416, 1804 |
| SatI | GCNGC | 7 cut(s) | 51, 145, 544, 1515, 1956, 1968, 1988 |
| Sau96I | GGNCC | 3 cut(s) | 651, 827, 1279 |
| SchI | GAGTC | 5 cut(s) | 34, 52, 361, 865, 1713 |
| ScrFI | CCNGG | 3 cut(s) | 639, 1034, 1252 |
| SduI | GDGCHC | 1 cut(s) | 862 |
| SexAI | ACCWGGT | 1 cut(s) | 1032 |
| SfaNI | GCATC | 6 cut(s) | 240, 442, 566, 1302, 1356, 1547 |
| SfoI | GGCGCC | 1 cut(s) | 54 |
| SinI | GGWCC | 1 cut(s) | 651 |
| SsiI | CCGC | 4 cut(s) | 50, 649, 1130, 1645 |
| SspDI | GGCGCC | 1 cut(s) | 52 |
| SspMI | CTAG | 5 cut(s) | 122, 593, 1202, 1472, 1636 |
| StyD4I | CCNGG | 3 cut(s) | 637, 1032, 1250 |
| StyI | CCWWGG | 2 cut(s) | 121, 1889 |
| TaaI | ACNGT | 2 cut(s) | 473, 1420 |
| TaiI | ACGT | 3 cut(s) | 908, 948, 1021 |
| TaqI | TCGA | 4 cut(s) | 358, 1534, 1732, 1769 |
| TatI | WGTACW | 1 cut(s) | 1415 |
| TauI | GCSGC | 1 cut(s) | 53 |
| TfiI | GAWTC | 4 cut(s) | 268, 1468, 1593, 1612 |
| TscAI | CASTG | 6 cut(s) | 33, 42, 237, 476, 1194, 1425 |
| TseFI | GTSAC | 2 cut(s) | 37, 1753 |
| TseI | GCWGC | 6 cut(s) | 144, 543, 1514, 1955, 1967, 1987 |
| Tsp45I | GTSAC | 2 cut(s) | 37, 1753 |
| TspDTI | ATGAA | 8 cut(s) | 85, 260, 292, 409, 1103, 1334, 1439, 1565 |
| TspGWI | ACGGA | 2 cut(s) | 150, 535 |
| TspRI | CASTG | 6 cut(s) | 33, 42, 237, 476, 1194, 1425 |
| VpaK11BI | GGWCC | 1 cut(s) | 651 |
| XapI | RAATTY | 9 cut(s) | 426, 712, 911, 1272, 1351, 1387, 1530, 1576, 1666 |
| XbaI | TCTAGA | 1 cut(s) | 1201 |
| XmaJI | CCTAGG | 1 cut(s) | 121 |
| XspI | CTAG | 5 cut(s) | 122, 593, 1202, 1472, 1636 |