Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06340 AT3G06340 AT3G06340 AT3G06340 AT5G18750 |
| fragaria_vesca | FvH4_2g06370 |
| malus_domestica | MD13G1174800.v1.1 MD16G1176500.v1.1 |
| prunus_persica | Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 Prupe.1G143400_v2.0.a1 |
| pyrus_communis | pycom13g15060 pycom13g15070 pycom16g14800 pycom16g14810 |
| rosa_chinensis | RchiOBHm_Chr4g0420721 |
| rosa_laevigata | RLG00000007740 RLG00000030269 RLG00000030290 |
| rosa_multiflora | Rmu_co8498373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00363230 |
| rosa_rugosa | Rorug04G0165700 |
| rosa_samantha | Rh4AG227200 Rh4BG230000 Rh4CG242100 Rh4DG225500 |
| rosa_wichuraiana | Rw4G019660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 999 |
| AarI | CACCTGC | 1 cut(s) | 776 |
| Acc36I | ACCTGC | 2 cut(s) | 776, 979 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 528 |
| AccIII | TCCGGA | 1 cut(s) | 1356 |
| AciI | CCGC | 2 cut(s) | 1490, 1971 |
| AclWI | GGATC | 8 cut(s) | 1053, 1066, 1348, 1960, 1961, 2093, 2713, 2816 |
| AcoI | YGGCCR | 1 cut(s) | 1123 |
| AcuI | CTGAAG | 4 cut(s) | 200, 454, 924, 1095 |
| AdeI | CACNNNGTG | 1 cut(s) | 1877 |
| AfaI | GTAC | 4 cut(s) | 260, 560, 2258, 2646 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 439, 528, 785, 1132, 1655, 2072, 2528, 2529 |
| AflIII | ACRYGT | 1 cut(s) | 1786 |
| AjnI | CCWGG | 4 cut(s) | 484, 1478, 1873, 2091 |
| Alw21I | GWGCWC | 1 cut(s) | 1703 |
| Alw26I | GTCTC | 5 cut(s) | 629, 825, 837, 1655, 2004 |
| AlwI | GGATC | 8 cut(s) | 1053, 1066, 1348, 1960, 1961, 2093, 2713, 2816 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 317, 1955, 2189, 2492 |
| Ama87I | CYCGRG | 1 cut(s) | 1457 |
| Aor13HI | TCCGGA | 1 cut(s) | 1356 |
| AoxI | GGCC | 7 cut(s) | 21, 30, 1123, 1209, 1564, 1668, 2120 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 760, 792 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 620, 762 |
| AspA2I | CCTAGG | 1 cut(s) | 962 |
| AspLEI | GCGC | 1 cut(s) | 896 |
| AspS9I | GGNCC | 6 cut(s) | 30, 358, 776, 1492, 1668, 2120 |
| AsuHPI | GGTGA | 7 cut(s) | 275, 829, 1234, 1241, 1819, 1889, 1937 |
| AvaI | CYCGRG | 1 cut(s) | 1457 |
| AvaII | GGWCC | 3 cut(s) | 358, 776, 1492 |
| AvrII | CCTAGG | 1 cut(s) | 962 |
| BaeGI | GKGCMC | 1 cut(s) | 542 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 2836 |
| BalI | TGGCCA | 1 cut(s) | 1125 |
| BamHI | GGATCC | 1 cut(s) | 1058 |
| BanII | GRGCYC | 1 cut(s) | 82 |
| Bbv12I | GWGCWC | 1 cut(s) | 1703 |
| BbvCI | CCTCAGC | 2 cut(s) | 1770, 1992 |
| BciT130I | CCWGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| BclI | TGATCA | 1 cut(s) | 223 |
| BcoDI | GTCTC | 5 cut(s) | 629, 825, 837, 1655, 2004 |
| BfaI | CTAG | 6 cut(s) | 963, 1434, 1865, 2043, 2313, 2477 |
| BfoI | RGCGCY | 1 cut(s) | 897 |
| BfuAI | ACCTGC | 2 cut(s) | 776, 979 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 29, 2805 |
| BglII | AGATCT | 2 cut(s) | 968, 2244 |
| BlnI | CCTAGG | 1 cut(s) | 962 |
| Bme1390I | CCNGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| Bme18I | GGWCC | 3 cut(s) | 358, 776, 1492 |
| BmeT110I | CYCGRG | 1 cut(s) | 1457 |
| BmgT120I | GGNCC | 6 cut(s) | 30, 358, 776, 1492, 1668, 2120 |
| BmiI | GGNNCC | 3 cut(s) | 1060, 1494, 2121 |
| BmrFI | CCNGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| BmsI | GCATC | 7 cut(s) | 129, 1081, 1283, 1407, 2143, 2197, 2388 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1879, 1911 |
| BpmI | CTGGAG | 2 cut(s) | 143, 1505 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1770, 1992 |
| BsaAI | YACGTR | 1 cut(s) | 1787 |
| BsaJI | CCNNGG | 4 cut(s) | 33, 962, 2092, 2730 |
| BsaWI | WCCGGW | 3 cut(s) | 305, 822, 1356 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1926, 1956 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 439, 528, 785, 1132, 1655, 2072, 2528, 2529 |
| Bse1I | ACTGG | 9 cut(s) | 206, 562, 867, 1567, 1688, 1700, 1927, 2028, 2561 |
| Bse3DI | GCAATG | 2 cut(s) | 160, 624 |
| BseAI | TCCGGA | 1 cut(s) | 1356 |
| BseBI | CCWGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| BseDI | CCNNGG | 4 cut(s) | 33, 962, 2092, 2730 |
| BseGI | GGATG | 4 cut(s) | 934, 1422, 1907, 2671 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 439, 528, 785, 1132, 1655, 2072, 2528, 2529 |
| BseMI | GCAATG | 2 cut(s) | 160, 624 |
| BseNI | ACTGG | 9 cut(s) | 206, 562, 867, 1567, 1688, 1700, 1927, 2028, 2561 |
| BseRI | GAGGAG | 2 cut(s) | 1066, 1118 |
| BseSI | GKGCMC | 1 cut(s) | 542 |
| BseYI | CCCAGC | 2 cut(s) | 684, 2811 |
| BsgI | GTGCAG | 4 cut(s) | 330, 440, 569, 957 |
| BshFI | GGCC | 7 cut(s) | 23, 32, 1125, 1211, 1566, 1670, 2122 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1703 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1457 |
| BsiSI | CCGG | 4 cut(s) | 306, 823, 1357, 2773 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 439, 528, 785, 1132, 1655, 2072, 2528, 2529 |
| BsmAI | GTCTC | 5 cut(s) | 629, 825, 837, 1655, 2004 |
| BsmI | GAATGC | 3 cut(s) | 210, 2357, 2760 |
| BsnI | GGCC | 7 cut(s) | 23, 32, 1125, 1211, 1566, 1670, 2122 |
| BsoBI | CYCGRG | 1 cut(s) | 1457 |
| Bsp1286I | GDGCHC | 3 cut(s) | 82, 542, 1703 |
| Bsp13I | TCCGGA | 1 cut(s) | 1356 |
| Bsp1407I | TGTACA | 1 cut(s) | 2256 |
| BspACI | CCGC | 2 cut(s) | 1490, 1971 |
| BspANI | GGCC | 7 cut(s) | 23, 32, 1125, 1211, 1566, 1670, 2122 |
| BspEI | TCCGGA | 1 cut(s) | 1356 |
| BspHI | TCATGA | 3 cut(s) | 1261, 2149, 2158 |
| BspLI | GGNNCC | 3 cut(s) | 1060, 1494, 2121 |
| BspMI | ACCTGC | 2 cut(s) | 776, 979 |
| BspPI | GGATC | 8 cut(s) | 1053, 1066, 1348, 1960, 1961, 2093, 2713, 2816 |
| BsrDI | GCAATG | 2 cut(s) | 160, 624 |
| BsrGI | TGTACA | 1 cut(s) | 2256 |
| BsrI | ACTGG | 9 cut(s) | 206, 562, 867, 1567, 1688, 1700, 1927, 2028, 2561 |
| BssECI | CCNNGG | 4 cut(s) | 33, 962, 2092, 2730 |
| BssT1I | CCWWGG | 3 cut(s) | 33, 962, 2730 |
| Bst2UI | CCWGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| Bst4CI | ACNGT | 3 cut(s) | 362, 1314, 2261 |
| Bst6I | CTCTTC | 6 cut(s) | 12, 821, 1043, 1185, 2388, 2778 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 317 |
| BstAUI | TGTACA | 1 cut(s) | 2256 |
| BstBAI | YACGTR | 1 cut(s) | 1787 |
| BstC8I | GCNNGC | 3 cut(s) | 648, 675, 2276 |
| BstF5I | GGATG | 4 cut(s) | 934, 1422, 1907, 2671 |
| BstH2I | RGCGCY | 1 cut(s) | 897 |
| BstHHI | GCGC | 1 cut(s) | 896 |
| BstMAI | GTCTC | 5 cut(s) | 629, 825, 837, 1655, 2004 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 29, 317, 514, 517, 2805 |
| BstNI | CCWGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| BstNSI | RCATGY | 1 cut(s) | 379 |
| BstSCI | CCNGG | 4 cut(s) | 484, 1478, 1873, 2091 |
| BstSLI | GKGCMC | 1 cut(s) | 542 |
| BstX2I | RGATCY | 5 cut(s) | 968, 1058, 1353, 1952, 2244 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1219 |
| BstYI | RGATCY | 5 cut(s) | 968, 1058, 1353, 1952, 2244 |
| BsuRI | GGCC | 7 cut(s) | 23, 32, 1125, 1211, 1566, 1670, 2122 |
| BtsCI | GGATG | 4 cut(s) | 934, 1422, 1907, 2671 |
| BtsI | GCAGTG | 1 cut(s) | 883 |
| BtsIMutI | CAGTG | 6 cut(s) | 874, 883, 1071, 1310, 2035, 2266 |
| BveI | ACCTGC | 2 cut(s) | 776, 979 |
| Cac8I | GCNNGC | 3 cut(s) | 648, 675, 2276 |
| CaiI | CAGNNNCTG | 4 cut(s) | 317, 1955, 2189, 2492 |
| CciI | TCATGA | 3 cut(s) | 1261, 2149, 2158 |
| CfoI | GCGC | 1 cut(s) | 896 |
| Cfr13I | GGNCC | 6 cut(s) | 30, 358, 776, 1492, 1668, 2120 |
| CsiI | ACCWGGT | 1 cut(s) | 1873 |
| Csp6I | GTAC | 4 cut(s) | 259, 559, 2257, 2645 |
| CviQI | GTAC | 4 cut(s) | 259, 559, 2257, 2645 |
| DraI | TTTAAA | 3 cut(s) | 1375, 1915, 2686 |
| DraIII | CACNNNGTG | 1 cut(s) | 1877 |
| EaeI | YGGCCR | 1 cut(s) | 1123 |
| Eam1104I | CTCTTC | 6 cut(s) | 12, 821, 1043, 1185, 2388, 2778 |
| EarI | CTCTTC | 6 cut(s) | 12, 821, 1043, 1185, 2388, 2778 |
| EciI | GGCGGA | 1 cut(s) | 1505 |
| Eco130I | CCWWGG | 3 cut(s) | 33, 962, 2730 |
| Eco24I | GRGCYC | 1 cut(s) | 82 |
| Eco32I | GATATC | 3 cut(s) | 1611, 2515, 2569 |
| Eco47I | GGWCC | 3 cut(s) | 358, 776, 1492 |
| Eco57I | CTGAAG | 4 cut(s) | 200, 454, 924, 1095 |
| Eco88I | CYCGRG | 1 cut(s) | 1457 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2120 |
| EcoRI | GAATTC | 2 cut(s) | 451, 1267 |
| EcoRII | CCWGG | 4 cut(s) | 484, 1478, 1873, 2091 |
| EcoRV | GATATC | 3 cut(s) | 1611, 2515, 2569 |
| EcoT14I | CCWWGG | 3 cut(s) | 33, 962, 2730 |
| EcoT22I | ATGCAT | 1 cut(s) | 381 |
| EcoT38I | GRGCYC | 1 cut(s) | 82 |
| ErhI | CCWWGG | 3 cut(s) | 33, 962, 2730 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 605, 637 |
| FauI | CCCGC | 1 cut(s) | 1978 |
| FauNDI | CATATG | 1 cut(s) | 631 |
| FbaI | TGATCA | 1 cut(s) | 223 |
| FokI | GGATG | 4 cut(s) | 941, 1429, 1894, 2678 |
| FriOI | GRGCYC | 1 cut(s) | 82 |
| FspBI | CTAG | 6 cut(s) | 963, 1434, 1865, 2043, 2313, 2477 |
| GlaI | GCGC | 1 cut(s) | 895 |
| GsaI | CCCAGC | 2 cut(s) | 688, 2815 |
| GsuI | CTGGAG | 2 cut(s) | 143, 1505 |
| HaeII | RGCGCY | 1 cut(s) | 897 |
| HaeIII | GGCC | 7 cut(s) | 23, 32, 1125, 1211, 1566, 1670, 2122 |
| HapII | CCGG | 4 cut(s) | 306, 823, 1357, 2773 |
| HhaI | GCGC | 1 cut(s) | 896 |
| Hin6I | GCGC | 1 cut(s) | 894 |
| HinP1I | GCGC | 1 cut(s) | 894 |
| HpaII | CCGG | 4 cut(s) | 306, 823, 1357, 2773 |
| HphI | GGTGA | 7 cut(s) | 275, 829, 1234, 1241, 1819, 1889, 1937 |
| Hpy166II | GTNNAC | 2 cut(s) | 820, 1693 |
| Hpy8I | GTNNAC | 2 cut(s) | 820, 1693 |
| HpyAV | CCTTC | 9 cut(s) | 91, 433, 631, 775, 1195, 1798, 1841, 1925, 2775 |
| HpyCH4III | ACNGT | 3 cut(s) | 362, 1314, 2261 |
| HpyCH4IV | ACGT | 3 cut(s) | 370, 1786, 1859 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 29, 317, 514, 517, 2805 |
| HpySE526I | ACGT | 3 cut(s) | 370, 1786, 1859 |
| HspAI | GCGC | 1 cut(s) | 894 |
| Kpn2I | TCCGGA | 1 cut(s) | 1356 |
| Ksp22I | TGATCA | 1 cut(s) | 223 |
| LmnI | GCTCC | 3 cut(s) | 955, 1292, 1459 |
| LweI | GCATC | 7 cut(s) | 129, 1081, 1283, 1407, 2143, 2197, 2388 |
| MabI | ACCWGGT | 1 cut(s) | 1873 |
| MaeI | CTAG | 6 cut(s) | 963, 1434, 1865, 2043, 2313, 2477 |
| MaeII | ACGT | 3 cut(s) | 370, 1786, 1859 |
| MaeIII | GTNAC | 4 cut(s) | 362, 371, 878, 2594 |
| MfeI | CAATTG | 2 cut(s) | 1717, 2172 |
| MflI | RGATCY | 5 cut(s) | 968, 1058, 1353, 1952, 2244 |
| MhlI | GDGCHC | 3 cut(s) | 82, 542, 1703 |
| MlsI | TGGCCA | 1 cut(s) | 1125 |
| MluNI | TGGCCA | 1 cut(s) | 1125 |
| MlyI | GAGTC | 5 cut(s) | 875, 893, 1202, 1706, 2554 |
| MmeI | TCCRAC | 3 cut(s) | 301, 428, 1759 |
| Mox20I | TGGCCA | 1 cut(s) | 1125 |
| Mph1103I | ATGCAT | 1 cut(s) | 381 |
| MroI | TCCGGA | 1 cut(s) | 1356 |
| MroXI | GAANNNNTTC | 2 cut(s) | 620, 762 |
| MscI | TGGCCA | 1 cut(s) | 1125 |
| Msp20I | TGGCCA | 1 cut(s) | 1125 |
| MspA1I | CMGCKG | 1 cut(s) | 2711 |
| MspI | CCGG | 4 cut(s) | 306, 823, 1357, 2773 |
| MspR9I | CCNGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| MunI | CAATTG | 2 cut(s) | 1717, 2172 |
| Mva1269I | GAATGC | 3 cut(s) | 210, 2357, 2760 |
| MvaI | CCWGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 29, 317, 514, 517, 2805 |
| NdeI | CATATG | 1 cut(s) | 631 |
| NlaIV | GGNNCC | 3 cut(s) | 1060, 1494, 2121 |
| NmuCI | GTSAC | 3 cut(s) | 362, 878, 2594 |
| NsiI | ATGCAT | 1 cut(s) | 381 |
| NspI | RCATGY | 1 cut(s) | 379 |
| PagI | TCATGA | 3 cut(s) | 1261, 2149, 2158 |
| PaqCI | CACCTGC | 1 cut(s) | 776 |
| PctI | GAATGC | 3 cut(s) | 210, 2357, 2760 |
| PdmI | GAANNNNTTC | 2 cut(s) | 620, 762 |
| PfeI | GAWTC | 6 cut(s) | 493, 758, 1109, 2309, 2434, 2453 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 528 |
| PleI | GAGTC | 5 cut(s) | 875, 893, 1201, 1706, 2554 |
| PpsI | GAGTC | 5 cut(s) | 875, 893, 1201, 1706, 2554 |
| Ppu21I | YACGTR | 1 cut(s) | 1787 |
| PsiI | TTATAA | 1 cut(s) | 999 |
| Psp6I | CCWGG | 4 cut(s) | 484, 1478, 1873, 2091 |
| PspFI | CCCAGC | 2 cut(s) | 684, 2811 |
| PspGI | CCWGG | 4 cut(s) | 484, 1478, 1873, 2091 |
| PspN4I | GGNNCC | 3 cut(s) | 1060, 1494, 2121 |
| PspPI | GGNCC | 6 cut(s) | 30, 358, 776, 1492, 1668, 2120 |
| PstNI | CAGNNNCTG | 4 cut(s) | 317, 1955, 2189, 2492 |
| PsuI | RGATCY | 5 cut(s) | 968, 1058, 1353, 1952, 2244 |
| PvuII | CAGCTG | 1 cut(s) | 2711 |
| RsaI | GTAC | 4 cut(s) | 260, 560, 2258, 2646 |
| RsaNI | GTAC | 4 cut(s) | 259, 559, 2257, 2645 |
| Sau96I | GGNCC | 6 cut(s) | 30, 358, 776, 1492, 1668, 2120 |
| SchI | GAGTC | 5 cut(s) | 875, 893, 1202, 1706, 2554 |
| ScrFI | CCNGG | 4 cut(s) | 486, 1480, 1875, 2093 |
| SduI | GDGCHC | 3 cut(s) | 82, 542, 1703 |
| SexAI | ACCWGGT | 1 cut(s) | 1873 |
| SfaNI | GCATC | 7 cut(s) | 129, 1081, 1283, 1407, 2143, 2197, 2388 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 29 |
| SinI | GGWCC | 3 cut(s) | 358, 776, 1492 |
| SsiI | CCGC | 2 cut(s) | 1490, 1971 |
| SspI | AATATT | 1 cut(s) | 460 |
| SspMI | CTAG | 6 cut(s) | 963, 1434, 1865, 2043, 2313, 2477 |
| StyD4I | CCNGG | 4 cut(s) | 484, 1478, 1873, 2091 |
| StyI | CCWWGG | 3 cut(s) | 33, 962, 2730 |
| TaaI | ACNGT | 3 cut(s) | 362, 1314, 2261 |
| TaiI | ACGT | 3 cut(s) | 373, 1789, 1862 |
| TaqI | TCGA | 5 cut(s) | 427, 1199, 2205, 2573, 2691 |
| TatI | WGTACW | 2 cut(s) | 258, 2256 |
| TfiI | GAWTC | 6 cut(s) | 493, 758, 1109, 2309, 2434, 2453 |
| TscAI | CASTG | 6 cut(s) | 874, 883, 1078, 1317, 2035, 2266 |
| TseFI | GTSAC | 3 cut(s) | 362, 878, 2594 |
| Tsp45I | GTSAC | 3 cut(s) | 362, 878, 2594 |
| TspGWI | ACGGA | 3 cut(s) | 941, 991, 1376 |
| TspRI | CASTG | 6 cut(s) | 874, 883, 1078, 1317, 2035, 2266 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 528 |
| VpaK11BI | GGWCC | 3 cut(s) | 358, 776, 1492 |
| XbaI | TCTAGA | 1 cut(s) | 2042 |
| XceI | RCATGY | 1 cut(s) | 379 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 692 |
| XmaJI | CCTAGG | 1 cut(s) | 962 |
| XmnI | GAANNNNTTC | 2 cut(s) | 620, 762 |
| XspI | CTAG | 6 cut(s) | 963, 1434, 1865, 2043, 2313, 2477 |
| Zsp2I | ATGCAT | 1 cut(s) | 381 |