Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0006121

Physical Location & Seq

Genomic Coordinates Forward (+)

17628322 .. 17640308

Gene Structure 11987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g21280.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGTGGTTTTCATTTTGGAAGTCCAGGGATCGCTTCTCCTTAGACGAGCTCAGGTATTTAACTGATCAGCTGATAAAAGTTCAAATTGTGAATGAAGTAAACAAGGATTTCGTTATTGAGGCGCTGAGATCCATTGCGGAGTTAATAACGTATGGAGACCAGCATGACTCCACCTTTTTTGAATTTTTCATGGAGAAGCAAGTCATGGGAGAGTTTGTACGTATATTGAAGGTTAGCAGAACTATGACTGTGTCACTTCAGTTGCTTCAGACAATCAGCATTATGATCCAGAACCTAAAAAATGAACACGCTATATACTACATGTTCAGTAATGAACATATGAACTACTTGATAACGTTTTCATTTGACTTCCAAAATGAAGAGCTACTGTCGTACTACATATCCTTCTTAAGAGCAATAAGTGGGAAGCTAGACAGGAATACAATTTCTCTGCTTGTAAAGACTCAAAATGATGAAGTGGTTTCATTTCCACTCTATGTTGAGGCAATACGTTTTGCCTTTCATGAGGAGAGCATGGTCCGCACTGCCATACGGGCTTTGACACTTAATGTTTATCATGTGGGAGATGAAAGTGTCAACAGATATGTCACCAGTGCTCCTCATGCAGATTATTTTTCAAACCTAGTTACATTTTTCCGAAAGCAGTGCATCAATCTAAATGCCTTGGTTTCAGACTCTATGAAAAATCCGGGTGCAGAGTCTGCAGACACAACCGCATTAATTTCTGCTGCTGTTGATGAGATCGATCACAATCTCTACTATTTTAGCGATGTTATTTCTGCAGGAATTCCTGATGTTGGGAGGTTAATTACAGATAACATCTTGAAGCTTTTGATATTCCCGCTGCTTCTTCCTTCACTTACAATAAGAGCTGTGGAAGGGATACAAATTGGTGCTGCCACGTCTTTGTACTTGGTTTGTTGCATCCTGCACATAGTGAAAATCAAGGATTTGGCAAATACCATTTGTGCTGCTCTTTTCTTTCCGTTGGATTCTTTCTTTCCAAAGTCTGGAGCTAAACCAAATGGCTGTACGCCTTTCCATGGTTTTGCACATGAAAGCCAACCACCAGGCAGTAATACCAAGGAAGGTGTTGGAATATTAAGAGTTGACATGCCAAACTTGTCAAGCTCTCCCCAAAGAGAATATGATTATTGTGATTTTCATTTGTCTTTGAGGGAGGCTTTGATTTCTTATATTGCGAGTGGGGATGATATACAAGTTGCTGGTTCGTTGAGTGTACTAGCTACTTTACTGCAGACAAAAGAATTGGATGAATCAATGCTAGATGCTCTTGGAATTCTTCCTCAACGCAAACAGCATAAGAAACTTCTGCTGCAAGCTTTGGTTGGTGAAGTCTCAGGAGAAGAGCAACTTTTTTCTTCAGAAGATGGCTCGTCAAAAGATGGTATTGAATGTGGTAGTGAGCTTGATAGTTCTCTACAAAAGCTTAAGGAACAGTTTGGACTGTTGTGTTCTTCACTGGAAGTGAGGGCTAGTCCTCGAGTACATAGATTTCAGGTGCTTGATGCATTGGTCAGTCTTTTTTGCCGTTCAAATATATCTGCTGAAACATTATGGTATGGTGGTTGGCTTTTGCGCCAGTTACTTCCTTATAGCGAGGCAGAGTTTAACAGCCATCATCTCAAGATGCTGAATGATTCATATAAGAACTGTGCTAGTGCTCTTCTAATGGAGACTAGAGGAGTCTGGCCGGATCTTCTTGTAACAGTCCTCTGCGATGAATGGAAACGGTGCAAGAGGGTAATAGAGGCTTCCTCCCCTCGGAAAGAGCCCAAGTGTATTCTGTTGTCATCTCAGAGGTTCTCGTCTGAAGATGGTATCACAAGTGATTCATCATTTGCTGCTGGTGAAAGGATGTGTGAATTGGTCAAGGTGTTTGTAATCCTACATCAACTTCAAATTTTCTCACTTGGTAGAACTTTGCCCGAGAAACCTCCTATTAAACCTCCAGCTGATGCTTTTGAAAATTCCCGTGCACAAAGTGCTGGCCTAGATGCTGCAGGTCCAAAGCTTGGCACTGAGCTAAGACTTGTTGATGCTGTACCTTGTAGAATTGCATTTGAGAGGGGTAAAGAACGTCATTTTTCCTTCCTAGCAATCTCTTTGGGTGCATCTGGCTGGGTTGTTTTAGCTGAAGAGTTACCCTTAAAGGAGCCTTATGGAGTTGTTCGTATGGTTGCACCTTTGGCCGGTACCAATGTATTCCTCTTCACAGTTCATATTGGTAAGCAGTACCAGATTCTTTCTATTGAAGCCAAAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0007034 GO:0008150 GO:0008152 GO:0009058 GO:0009718 GO:0009812 GO:0009813 GO:0009987 GO:0010638 GO:0012505 GO:0016020 GO:0016192 GO:0019898 GO:0030154 GO:0032502 GO:0033043 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044088 GO:0044090 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0045165 GO:0046148 GO:0046283 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0065007 GO:0071702 GO:0071704 GO:1901576 GO:1903415

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FPL

Protein Analysis

770

Amino Acids

86.24

Weight (kDa)

5.61

Isoelectric Point (pI)

39.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28430
fragaria_vesca	FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030
malus_domestica	MD13G1240300.v1.1
prunus_persica	Prupe.1G073600_v2.0.a1 Prupe.1G073600_v2.0.a1 Prupe.1G073600_v2.0.a1
pyrus_communis	pycom13g21280 pycom16g20730
rosa_chinensis	RchiOBHm_Chr4g0399151
rosa_laevigata	RLG00000009295
rosa_multiflora	Rmu_sc0005882.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344120
rosa_rugosa	Rorug04G0014200
rosa_samantha	Rh4AG092100 Rh4BG090200 Rh4CG100600 Rh4DG084700
rosa_wichuraiana	Rw4G007610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2036
Acc65I	GGTACC	1 cut(s)	2237
AccB1I	GGYRCC	1 cut(s)	2237
AccB7I	CCANNNNNTGG	2 cut(s)	1031, 2057
AciI	CCGC	4 cut(s)	137, 541, 735, 863
AclI	AACGTT	1 cut(s)	356
AclWI	GGATC	4 cut(s)	36, 123, 280, 1746
AcoI	YGGCCR	2 cut(s)	1733, 2232
AcsI	RAATTY	5 cut(s)	182, 807, 1320, 1944, 2011
AcuI	CTGAAG	5 cut(s)	242, 251, 1389, 1875, 2199
AdeI	CACNNNGTG	2 cut(s)	958, 2027
AfaI	GTAC	9 cut(s)	219, 395, 932, 1054, 1263, 1530, 2088, 2239, 2279
AfiI	CCNNNNNNNGG	6 cut(s)	818, 1031, 1064, 1806, 2057, 2234
AflII	CTTAAG	2 cut(s)	409, 1472
AflIII	ACRYGT	1 cut(s)	321
AjiI	CACGTC	1 cut(s)	924
AjnI	CCWGG	2 cut(s)	23, 1090
Alw21I	GWGCWC	4 cut(s)	51, 619, 1708, 2023
Alw26I	GTCTC	3 cut(s)	150, 1384, 1712
Alw44I	GTGCAC	1 cut(s)	2019
AlwI	GGATC	4 cut(s)	36, 123, 280, 1746
AlwNI	CAGNNNCTG	1 cut(s)	722
Ama87I	CYCGRG	2 cut(s)	1524, 1970
AoxI	GGCC	3 cut(s)	1733, 2032, 2232
ApaLI	GTGCAC	1 cut(s)	2019
ApeKI	GCWGC	7 cut(s)	749, 865, 917, 992, 1357, 1886, 2042
ApoI	RAATTY	5 cut(s)	182, 807, 1320, 1944, 2011
AseI	ATTAAT	1 cut(s)	740
Asp718I	GGTACC	1 cut(s)	2237
AspLEI	GCGC	2 cut(s)	124, 1623
AspS9I	GGNCC	2 cut(s)	538, 2048
AsuC2I	CCSGG	1 cut(s)	711
AsuHPI	GGTGA	3 cut(s)	601, 1385, 1904
AvaI	CYCGRG	2 cut(s)	1524, 1970
AvaII	GGWCC	2 cut(s)	538, 2048
BaeGI	GKGCMC	1 cut(s)	2023
BaeI	ACNNNNGTAYC	2 cut(s)	2229, 2262
BanI	GGYRCC	1 cut(s)	2237
BanII	GRGCYC	2 cut(s)	51, 1818
Bbv12I	GWGCWC	4 cut(s)	51, 619, 1708, 2023
BbvI	GCAGC	7 cut(s)	736, 852, 904, 979, 1344, 1873, 2029
BccI	CCATC	4 cut(s)	1406, 1421, 1668, 1853
BceAI	ACGGC	1 cut(s)	1557
BcgI	CGANNNNNNTGC	2 cut(s)	648, 682
BciT130I	CCWGG	2 cut(s)	25, 1092
BciVI	GTATCC	1 cut(s)	897
BclI	TGATCA	1 cut(s)	64
BcnI	CCSGG	1 cut(s)	711
BcoDI	GTCTC	3 cut(s)	150, 1384, 1712
BfaI	CTAG	9 cut(s)	431, 644, 1265, 1307, 1518, 1701, 1722, 2036, 2138
BfmI	CTRYAG	4 cut(s)	723, 801, 1277, 2043
BfoI	RGCGCY	1 cut(s)	125
BfrI	CTTAAG	2 cut(s)	409, 1472
BfuAI	ACCTGC	1 cut(s)	2036
BfuI	GTATCC	1 cut(s)	897
BglI	GCCNNNNNGGC	1 cut(s)	554
BisI	GCNGC	7 cut(s)	750, 866, 918, 993, 1358, 1887, 2043
BlsI	GCNGC	7 cut(s)	751, 867, 919, 994, 1359, 1888, 2044
Bme1390I	CCNGG	3 cut(s)	25, 711, 1092
Bme18I	GGWCC	2 cut(s)	538, 2048
BmeT110I	CYCGRG	2 cut(s)	1524, 1970
BmgBI	CACGTC	1 cut(s)	924
BmgT120I	GGNCC	2 cut(s)	538, 2048
BmiI	GGNNCC	2 cut(s)	2199, 2239
BmrFI	CCNGG	3 cut(s)	25, 711, 1092
BmsI	GCATC	9 cut(s)	678, 954, 1300, 1540, 1662, 1990, 2029, 2071, 2165
BplI	GAGNNNNNCTC	2 cut(s)	1784, 1816
BpmI	CTGGAG	2 cut(s)	1053, 1977
Bpu10I	CCTNAGC	1 cut(s)	50
BpuEI	CTTGAG	1 cut(s)	1652
BpuMI	CCSGG	1 cut(s)	711
Bsa29I	ATCGAT	1 cut(s)	765
BsaAI	YACGTR	1 cut(s)	221
BsaBI	GATNNNNATC	1 cut(s)	771
BsaI	GGTCTC	1 cut(s)	150
BsaJI	CCNNGG	5 cut(s)	24, 684, 1063, 1104, 1805
BsaXI	ACNNNNNCTCC	4 cut(s)	201, 231, 601, 631
Bsc4I	CCNNNNNNNGG	6 cut(s)	818, 1031, 1064, 1806, 2057, 2234
Bse118I	RCCGGY	1 cut(s)	2234
Bse1I	ACTGG	3 cut(s)	612, 1509, 1624
Bse3DI	GCAATG	1 cut(s)	132
Bse8I	GATNNNNATC	1 cut(s)	771
BseBI	CCWGG	2 cut(s)	25, 1092
BseCI	ATCGAT	1 cut(s)	765
BseDI	CCNNGG	5 cut(s)	24, 684, 1063, 1104, 1805
BseGI	GGATG	4 cut(s)	945, 1237, 1300, 1905
BseJI	GATNNNNATC	1 cut(s)	771
BseLI	CCNNNNNNNGG	6 cut(s)	818, 1031, 1064, 1806, 2057, 2234
BseMI	GCAATG	1 cut(s)	132
BseMII	CTCAG	5 cut(s)	64, 116, 1395, 1853, 2055
BseNI	ACTGG	3 cut(s)	612, 1509, 1624
BseRI	GAGGAG	3 cut(s)	542, 609, 1740
BseSI	GKGCMC	1 cut(s)	2023
BseXI	GCAGC	7 cut(s)	736, 852, 904, 979, 1344, 1873, 2029
BseYI	CCCAGC	1 cut(s)	2163
BsgI	GTGCAG	2 cut(s)	735, 935
BshFI	GGCC	3 cut(s)	1735, 2034, 2234
BshNI	GGYRCC	1 cut(s)	2237
BshVI	ATCGAT	1 cut(s)	765
BsiHKAI	GWGCWC	4 cut(s)	51, 619, 1708, 2023
BsiHKCI	CYCGRG	2 cut(s)	1524, 1970
BsiSI	CCGG	3 cut(s)	710, 1736, 2235
BslI	CCNNNNNNNGG	6 cut(s)	818, 1031, 1064, 1806, 2057, 2234
BsmAI	GTCTC	3 cut(s)	150, 1384, 1712
BsnI	GGCC	3 cut(s)	1735, 2034, 2234
Bso31I	GGTCTC	1 cut(s)	150
BsoBI	CYCGRG	2 cut(s)	1524, 1970
Bsp1286I	GDGCHC	5 cut(s)	51, 619, 1708, 1818, 2023
Bsp143I	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
Bsp19I	CCATGG	1 cut(s)	1063
BspACI	CCGC	4 cut(s)	137, 541, 735, 863
BspANI	GGCC	3 cut(s)	1735, 2034, 2234
BspCNI	CTCAG	5 cut(s)	63, 117, 1394, 1852, 2056
BspDI	ATCGAT	1 cut(s)	765
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	2 cut(s)	2199, 2239
BspMAI	CTGCAG	4 cut(s)	727, 805, 1281, 2047
BspMI	ACCTGC	1 cut(s)	2036
BspPI	GGATC	4 cut(s)	36, 123, 280, 1746
BspQI	GCTCTTC	3 cut(s)	375, 1383, 1713
BspT107I	GGYRCC	1 cut(s)	2237
BspTI	CTTAAG	2 cut(s)	409, 1472
BspTNI	GGTCTC	1 cut(s)	150
BsrDI	GCAATG	1 cut(s)	132
BsrFI	RCCGGY	1 cut(s)	2234
BsrI	ACTGG	3 cut(s)	612, 1509, 1624
BssAI	RCCGGY	1 cut(s)	2234
BssECI	CCNNGG	5 cut(s)	24, 684, 1063, 1104, 1805
BssMI	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
BssT1I	CCWWGG	3 cut(s)	684, 1063, 1104
Bst2UI	CCWGG	2 cut(s)	25, 1092
Bst4CI	ACNGT	8 cut(s)	250, 390, 1482, 1491, 1697, 1753, 1776, 2260
Bst6I	CTCTTC	5 cut(s)	375, 1383, 1713, 2175, 2258
BstAFI	CTTAAG	2 cut(s)	409, 1472
BstAPI	GCANNNNNTGC	2 cut(s)	722, 2027
BstBAI	YACGTR	1 cut(s)	221
BstC8I	GCNNGC	2 cut(s)	1362, 2032
BstDEI	CTNAG	7 cut(s)	40, 50, 125, 1381, 1839, 2064, 2069
BstDSI	CCRYGG	1 cut(s)	1063
BstF5I	GGATG	4 cut(s)	945, 1237, 1300, 1905
BstH2I	RGCGCY	1 cut(s)	125
BstHHI	GCGC	2 cut(s)	124, 1623
BstKTI	GATC	7 cut(s)	31, 67, 131, 288, 765, 769, 1741
BstMAI	GTCTC	3 cut(s)	150, 1384, 1712
BstMBI	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
BstMWI	GCNNNNNNNGC	6 cut(s)	540, 554, 623, 722, 2027, 2231
BstNI	CCWGG	2 cut(s)	25, 1092
BstNSI	RCATGY	2 cut(s)	325, 1138
BstSCI	CCNGG	3 cut(s)	23, 709, 1090
BstSFI	CTRYAG	4 cut(s)	723, 801, 1277, 2043
BstSLI	GKGCMC	1 cut(s)	2023
BstSNI	TACGTA	1 cut(s)	221
BstV1I	GCAGC	7 cut(s)	736, 852, 904, 979, 1344, 1873, 2029
BstX2I	RGATCY	2 cut(s)	128, 1738
BstYI	RGATCY	2 cut(s)	128, 1738
Bsu15I	ATCGAT	1 cut(s)	765
BsuI	GTATCC	1 cut(s)	897
BsuRI	GGCC	3 cut(s)	1735, 2034, 2234
BsuTUI	ATCGAT	1 cut(s)	765
BtgI	CCRYGG	1 cut(s)	1063
BtgZI	GCGATG	2 cut(s)	804, 1776
BtrI	CACGTC	1 cut(s)	924
BtsCI	GGATG	4 cut(s)	945, 1237, 1300, 1905
BtsI	GCAGTG	2 cut(s)	543, 671
BtsIMutI	CAGTG	5 cut(s)	543, 619, 671, 1502, 2061
BveI	ACCTGC	1 cut(s)	2036
Cac8I	GCNNGC	2 cut(s)	1362, 2032
CaiI	CAGNNNCTG	1 cut(s)	722
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	2 cut(s)	124, 1623
Cfr10I	RCCGGY	1 cut(s)	2234
Cfr13I	GGNCC	2 cut(s)	538, 2048
ClaI	ATCGAT	1 cut(s)	765
Csp6I	GTAC	9 cut(s)	218, 394, 931, 1053, 1262, 1529, 2087, 2238, 2278
CspCI	CAANNNNNGTGG	2 cut(s)	160, 195
CviQI	GTAC	9 cut(s)	218, 394, 931, 1053, 1262, 1529, 2087, 2238, 2278
DdeI	CTNAG	7 cut(s)	40, 50, 125, 1381, 1839, 2064, 2069
DpnI	GATC	7 cut(s)	30, 66, 130, 287, 764, 768, 1740
DpnII	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
DraIII	CACNNNGTG	2 cut(s)	958, 2027
EaeI	YGGCCR	2 cut(s)	1733, 2232
Eam1104I	CTCTTC	5 cut(s)	375, 1383, 1713, 2175, 2258
EarI	CTCTTC	5 cut(s)	375, 1383, 1713, 2175, 2258
Ecl136II	GAGCTC	1 cut(s)	49
Eco105I	TACGTA	1 cut(s)	221
Eco130I	CCWWGG	3 cut(s)	684, 1063, 1104
Eco24I	GRGCYC	2 cut(s)	51, 1818
Eco31I	GGTCTC	1 cut(s)	150
Eco47I	GGWCC	2 cut(s)	538, 2048
Eco53kI	GAGCTC	1 cut(s)	49
Eco57I	CTGAAG	5 cut(s)	242, 251, 1389, 1875, 2199
Eco88I	CYCGRG	2 cut(s)	1524, 1970
EcoICRI	GAGCTC	1 cut(s)	49
EcoRI	GAATTC	2 cut(s)	807, 1320
EcoRII	CCWGG	2 cut(s)	23, 1090
EcoT14I	CCWWGG	3 cut(s)	684, 1063, 1104
EcoT22I	ATGCAT	1 cut(s)	1555
EcoT38I	GRGCYC	2 cut(s)	51, 1818
ErhI	CCWWGG	3 cut(s)	684, 1063, 1104
FalI	AAGNNNNNCTT	2 cut(s)	1380, 1412
FauI	CCCGC	1 cut(s)	870
FauNDI	CATATG	1 cut(s)	339
FbaI	TGATCA	1 cut(s)	64
Fnu4HI	GCNGC	7 cut(s)	750, 866, 918, 993, 1358, 1887, 2043
FokI	GGATG	4 cut(s)	932, 1244, 1307, 1912
FriOI	GRGCYC	2 cut(s)	51, 1818
Fsp4HI	GCNGC	7 cut(s)	750, 866, 918, 993, 1358, 1887, 2043
FspBI	CTAG	9 cut(s)	431, 644, 1265, 1307, 1518, 1701, 1722, 2036, 2138
GlaI	GCGC	2 cut(s)	123, 1622
GluI	GCNGC	7 cut(s)	750, 866, 918, 993, 1358, 1887, 2043
GsaI	CCCAGC	1 cut(s)	2167
GsuI	CTGGAG	2 cut(s)	1053, 1977
HaeII	RGCGCY	1 cut(s)	125
HaeIII	GGCC	3 cut(s)	1735, 2034, 2234
HapII	CCGG	3 cut(s)	710, 1736, 2235
HhaI	GCGC	2 cut(s)	124, 1623
Hin6I	GCGC	2 cut(s)	122, 1621
HinP1I	GCGC	2 cut(s)	122, 1621
HincII	GTYRAC	2 cut(s)	598, 1132
HindII	GTYRAC	2 cut(s)	598, 1132
HindIII	AAGCTT	4 cut(s)	848, 1362, 1469, 2054
HpaII	CCGG	3 cut(s)	710, 1736, 2235
HphI	GGTGA	3 cut(s)	601, 1385, 1904
Hpy166II	GTNNAC	5 cut(s)	100, 598, 1132, 1262, 2021
Hpy188I	TCNGA	7 cut(s)	270, 659, 694, 1408, 1809, 1842, 1855
Hpy188III	TCNNGA	7 cut(s)	289, 524, 812, 844, 1032, 1383, 1669
Hpy8I	GTNNAC	5 cut(s)	100, 598, 1132, 1262, 2021
HpyAV	CCTTC	6 cut(s)	223, 415, 885, 893, 1103, 2143
HpyCH4III	ACNGT	8 cut(s)	250, 390, 1482, 1491, 1697, 1753, 1776, 2260
HpyCH4IV	ACGT	6 cut(s)	149, 220, 356, 511, 923, 2122
HpyF10VI	GCNNNNNNNGC	6 cut(s)	540, 554, 623, 722, 2027, 2231
HpyF3I	CTNAG	7 cut(s)	40, 50, 125, 1381, 1839, 2064, 2069
HpySE526I	ACGT	6 cut(s)	149, 220, 356, 511, 923, 2122
HspAI	GCGC	2 cut(s)	122, 1621
KpnI	GGTACC	1 cut(s)	2241
Ksp22I	TGATCA	1 cut(s)	64
Kzo9I	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
LguI	GCTCTTC	3 cut(s)	375, 1383, 1713
LmnI	GCTCC	3 cut(s)	622, 1034, 2197
Lsp1109I	GCAGC	7 cut(s)	736, 852, 904, 979, 1344, 1873, 2029
LweI	GCATC	9 cut(s)	678, 954, 1300, 1540, 1662, 1990, 2029, 2071, 2165
MaeI	CTAG	9 cut(s)	431, 644, 1265, 1307, 1518, 1701, 1722, 2036, 2138
MaeII	ACGT	6 cut(s)	149, 220, 356, 511, 923, 2122
MaeIII	GTNAC	6 cut(s)	252, 607, 646, 1626, 1747, 2184
MalI	GATC	7 cut(s)	30, 66, 130, 287, 764, 768, 1740
MboI	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
MflI	RGATCY	2 cut(s)	128, 1738
MhlI	GDGCHC	5 cut(s)	51, 619, 1708, 1818, 2023
MlyI	GAGTC	5 cut(s)	161, 457, 689, 728, 1737
MmeI	TCCRAC	2 cut(s)	990, 1096
Mph1103I	ATGCAT	1 cut(s)	1555
MspA1I	CMGCKG	3 cut(s)	70, 865, 1997
MspCI	CTTAAG	2 cut(s)	409, 1472
MspI	CCGG	3 cut(s)	710, 1736, 2235
MspR9I	CCNGG	3 cut(s)	25, 711, 1092
MvaI	CCWGG	2 cut(s)	25, 1092
MwoI	GCNNNNNNNGC	6 cut(s)	540, 554, 623, 722, 2027, 2231
NciI	CCSGG	1 cut(s)	711
NcoI	CCATGG	1 cut(s)	1063
NdeI	CATATG	1 cut(s)	339
NdeII	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
NlaIV	GGNNCC	2 cut(s)	2199, 2239
NmuCI	GTSAC	2 cut(s)	252, 607
NsiI	ATGCAT	1 cut(s)	1555
NspI	RCATGY	2 cut(s)	325, 1138
PaeR7I	CTCGAG	1 cut(s)	1524
PagI	TCATGA	1 cut(s)	523
PciI	ACATGT	1 cut(s)	321
PciSI	GCTCTTC	3 cut(s)	375, 1383, 1713
PfeI	GAWTC	5 cut(s)	1013, 1298, 1682, 1874, 2284
PflFI	GACNNNGTC	1 cut(s)	250
PflMI	CCANNNNNTGG	2 cut(s)	1031, 2057
PkrI	GCNGC	7 cut(s)	751, 867, 919, 994, 1359, 1888, 2044
PleI	GAGTC	5 cut(s)	161, 457, 689, 727, 1736
PpsI	GAGTC	5 cut(s)	161, 457, 689, 727, 1736
Ppu21I	YACGTR	1 cut(s)	221
PscI	ACATGT	1 cut(s)	321
PshBI	ATTAAT	1 cut(s)	740
Psp124BI	GAGCTC	1 cut(s)	51
Psp1406I	AACGTT	1 cut(s)	356
Psp6I	CCWGG	2 cut(s)	23, 1090
PspFI	CCCAGC	1 cut(s)	2163
PspGI	CCWGG	2 cut(s)	23, 1090
PspN4I	GGNNCC	2 cut(s)	2199, 2239
PspPI	GGNCC	2 cut(s)	538, 2048
PspXI	VCTCGAGB	1 cut(s)	1524
PstI	CTGCAG	4 cut(s)	727, 805, 1281, 2047
PstNI	CAGNNNCTG	1 cut(s)	722
PsuI	RGATCY	2 cut(s)	128, 1738
PsyI	GACNNNGTC	1 cut(s)	250
PvuII	CAGCTG	2 cut(s)	70, 1997
RsaI	GTAC	9 cut(s)	219, 395, 932, 1054, 1263, 1530, 2088, 2239, 2279
RsaNI	GTAC	9 cut(s)	218, 394, 931, 1053, 1262, 1529, 2087, 2238, 2278
SacI	GAGCTC	1 cut(s)	51
SapI	GCTCTTC	3 cut(s)	375, 1383, 1713
SatI	GCNGC	7 cut(s)	750, 866, 918, 993, 1358, 1887, 2043
Sau3AI	GATC	7 cut(s)	28, 64, 128, 285, 762, 766, 1738
Sau96I	GGNCC	2 cut(s)	538, 2048
SchI	GAGTC	5 cut(s)	161, 457, 689, 728, 1737
ScrFI	CCNGG	3 cut(s)	25, 711, 1092
SduI	GDGCHC	5 cut(s)	51, 619, 1708, 1818, 2023
SfaNI	GCATC	9 cut(s)	678, 954, 1300, 1540, 1662, 1990, 2029, 2071, 2165
SfcI	CTRYAG	4 cut(s)	723, 801, 1277, 2043
Sfr274I	CTCGAG	1 cut(s)	1524
SinI	GGWCC	2 cut(s)	538, 2048
SlaI	CTCGAG	1 cut(s)	1524
SmlI	CTYRAG	4 cut(s)	409, 1472, 1524, 1667
SmoI	CTYRAG	4 cut(s)	409, 1472, 1524, 1667
SnaBI	TACGTA	1 cut(s)	221
SsiI	CCGC	4 cut(s)	137, 541, 735, 863
SspI	AATATT	1 cut(s)	1122
SspMI	CTAG	9 cut(s)	431, 644, 1265, 1307, 1518, 1701, 1722, 2036, 2138
SstI	GAGCTC	1 cut(s)	51
StyD4I	CCNGG	3 cut(s)	23, 709, 1090
StyI	CCWWGG	3 cut(s)	684, 1063, 1104
TaaI	ACNGT	8 cut(s)	250, 390, 1482, 1491, 1697, 1753, 1776, 2260
TaiI	ACGT	6 cut(s)	152, 223, 359, 514, 926, 2125
TaqI	TCGA	2 cut(s)	765, 1525
TatI	WGTACW	3 cut(s)	930, 1261, 1528
TfiI	GAWTC	5 cut(s)	1013, 1298, 1682, 1874, 2284
TscAI	CASTG	5 cut(s)	550, 619, 671, 1509, 2068
TseFI	GTSAC	2 cut(s)	252, 607
TseI	GCWGC	7 cut(s)	749, 865, 917, 992, 1357, 1886, 2042
Tsp45I	GTSAC	2 cut(s)	252, 607
TspGWI	ACGGA	1 cut(s)	996
TspRI	CASTG	5 cut(s)	550, 619, 671, 1509, 2068
Tth111I	GACNNNGTC	1 cut(s)	250
Van91I	CCANNNNNTGG	2 cut(s)	1031, 2057
Vha464I	CTTAAG	2 cut(s)	409, 1472
VneI	GTGCAC	1 cut(s)	2019
VpaK11BI	GGWCC	2 cut(s)	538, 2048
VspI	ATTAAT	1 cut(s)	740
XapI	RAATTY	5 cut(s)	182, 807, 1320, 1944, 2011
XceI	RCATGY	2 cut(s)	325, 1138
XhoI	CTCGAG	1 cut(s)	1524
XspI	CTAG	9 cut(s)	431, 644, 1265, 1307, 1518, 1701, 1722, 2036, 2138
Zsp2I	ATGCAT	1 cut(s)	1555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.