Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0006121

Physical Location & Seq

Genomic Coordinates Forward (+)

16363766 .. 16375886

Gene Structure 12121 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G007610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

ATGTGGTTTTCGTTTTGGAGATCCAGGGATCGATTCTCCTTCGATGAGCTCAGGTATTTAACTGATCAGCTGGTGAAAATTCAAGTTGTGAATGACGTTAACAAGGATTTCGTTATTGAAGCTCTGAGATCAATTGCGGAGTTGATAACTTATGGCGACCAACATGACACAACTTTTTTTGAATTTTTTATGGAGAAGCAAATCATGGGAGAGTTTGTACGTATATTGAAGATTAGCAGAAATATGACTGTTTCACTTCAGTTGCTTCAGACAATCAGCATTATGATACAGAACCTAAAAAATGAACATGCTATATATTACATGTTCAGTAATGAACATATGAACTACTTAATAACTTACTCATTTGATTTTAAGAATGAAGAGCTACTTTCTTACTATATATCCTTCTTAAGAGCAATAAGTGGAAAGCTAGATAGAAATACAATTTCTCTGCTTGTAAAGACTCAAGAGGATGAAGTTGTTTCATTTCCGCTGTATGTTGAGGCAATACGATTTGCTTTTCATGAGGAGAGCATGGTCCGCACTGCTGTACGGGCTCTGACGCTTAATGTTTATCACGTTGGAGATGATTCTGTCAATAGATATGTCACCAGTGCCCCTCATTCAGATTATTTTTCAAACTTGGTTAAATTTTTCCGGAAGCAGTGCATCGATCTAAATGTATTGGTTTCTGGCACTACGACAAACCTGGGTGCAGACACAACCTTGTCAATTCCTGCTGCTGTTGATGAGATCGAGGACAATCTCTACTATTTCAGTGATATTATTTCTGCAGGAATTCCTGATGTTGGGAGGTTATTCACAGACAACATATTGCAGCTTTTGATATTTCCATTGCTTCTACCTTCTCTAACACTAAAAGCTGTCAAGGGGATTCAAATGGGTGCTGTCACGTCTTTGTATTTGATTTGTTGCATCTTGCGCATAGTAAAAATCAAGGATCTGTCAAATACTATTGCTGCCGCCCTATTCTGTCCGTTAGAAGCTTTCTTATCAAAGTCTGTTGCTGAACCCAATGGCTACATGTCTGGTTATGATGTTTCCCATGAAAGCCAACCACCAGGCAGTAATAATCTAACTAAGGCAGAAGTGGGAAATTTAAGTGTTGATGTGGCAAACTTGTCAATCTCTCCCCAAATCCAGCCAGTTGATGTCAGTATTGCAACAGGAAATGATAGTTGTGATTGTCATTTGCCTTTGAGGGAGGCTTTGCTTTCTTACCTTACGAGTGGGAACGATGTACAAGTTTCGGGTTCATTGAGTGTGCTGGCTACTTTGTTGCAAACAAAAGAATTGGATGAATCAATGTCAGATGCTCTGGGAATACTTCCTCAACGCAAACAGCATAAGAAACTTCTGCTGCAAGCTTTGGTTGGTGAAAGCTCAGGTGAAGAACAACTTTTTTCTTCAGAAAGTAGCTCCTTGAGAAACGGAATTGAATTTGGCAGTGAGCTTGATGGCTGTCTACAAAAGCTTAAGGAACAGTATGGAGTATCATGTTCTTTTCTGGAAGTGAGAGCTAGCCCTCGTGTACATAGATTTCAGGTGCTTGATGCATTGGTCAGTGTCTTCTGCCGTTCAAATTTATCGGCGGAGACTTTATGGGATGGAGGTTGGCTTTTGCGTCAATTGCTTCCTTATAGTGAGGCAGAATTCAACAGCCATCATCGGAAGTTGCTGAAGGAATCGTACAAGAACTGTGCTAGTGCTCTTATTGAGGAGACTAGAGGAATATGGCCGGATATACTTGTAACAGTGCTCTGTGATGAATGGAAAAAGTGCAAGAGAGGAATAGAGGCATCATCCCCTCGCAAAGAGCCCAAGGACATTTTGTTTTCATCTCGAAAGTTCTCCACTGAAGATGGTATCACAAGCGATTCATCGTTTGCTGCTGGTGAAAGGATGTGTGAGTTGGTGAAGGTGTTTGTACTTCTACATCAACTTCAAATTTTCACCCTTGGTAGACCTTTGCCTGAGCAACCTCCTATTTATCCTCCAGCTGACCTTTTAGAAGACTCTCGTGCAAAGAGTGCTGGCATAGATGCTTCAGGTCCCAAGCTTGGTAATGAGCTCAGACTTGTTGATGCCGTGCCTTGTAGAATTGCGTTTGAGAGGGGTAAAGAACGTCACTTTTGCTTTCTAGCAATCTCTTTGGGAGAATCAGGGTGGGTTGTTTTAGCTGAAGAATTACCCTTGAAGCAGCATCATGGTGTCGTTCGTGTGGCTGCACCTTTGGCTGGTTGCAATCCAAAAATTGATGATAAACATTCGAAATGGTTACACTTGCGGATCCGTCCTTATATTCTACCCTCAATGGATCCTGCTAGATCTGGTGCATATGGGAAAGTGAAGACAAAAGCTTTGGTTGATGGGAGATGGACTCTTGCATTCAGGGATGAAGAATCTTGCAAATCTGCTTTGGCTATGATTTCGGAGGAGCTCAATCTACAAAGTAATGAGGTGGGCAGAAGACTAAAACCTTTACTTGACCTCGAAACCGTTGTACAATCTTCAAACCCTTCTCTAGGTCCTCCCGAGGCTTCCTCTTCTTATTCAACACCTTCCAATTCCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001708 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0007034 GO:0008150 GO:0008152 GO:0009058 GO:0009718 GO:0009812 GO:0009813 GO:0009987 GO:0010638 GO:0012505 GO:0016020 GO:0016192 GO:0019898 GO:0030154 GO:0032502 GO:0033043 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044088 GO:0044090 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0045165 GO:0046148 GO:0046283 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0065007 GO:0071702 GO:0071704 GO:1901576 GO:1903415

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FPL

Protein Analysis

865

Amino Acids

96.8

Weight (kDa)

5.59

Isoelectric Point (pI)

43.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FPL	PF09758	42 - 192	7.6e-55	Uncharacterised conserved protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28430
fragaria_vesca	FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030 FvH4_4g07030
malus_domestica	MD13G1240300.v1.1
prunus_persica	Prupe.1G073600_v2.0.a1 Prupe.1G073600_v2.0.a1 Prupe.1G073600_v2.0.a1
pyrus_communis	pycom13g21280 pycom16g20730
rosa_chinensis	RchiOBHm_Chr4g0399151
rosa_laevigata	RLG00000009295
rosa_multiflora	Rmu_sc0005882.1_g000001
rosa_roxburghii	Rroxscaffold_5G00344120
rosa_rugosa	Rorug04G0014200
rosa_samantha	Rh4AG092100 Rh4BG090200 Rh4CG100600 Rh4DG084700
rosa_wichuraiana	Rw4G007610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	944
AccI	GTMKAC	2 cut(s)	1486, 1984
AccIII	TCCGGA	1 cut(s)	657
AciI	CCGC	6 cut(s)	137, 491, 541, 984, 1613, 2308
AclWI	GGATC	7 cut(s)	15, 36, 969, 2305, 2318, 2333, 2346
AcoI	YGGCCR	1 cut(s)	1757
AcsI	RAATTY	9 cut(s)	78, 182, 650, 798, 1117, 1460, 1603, 1673, 1968
AcuI	CTGAAG	7 cut(s)	242, 251, 1413, 1721, 1899, 2052, 2223
AfaI	GTAC	7 cut(s)	219, 552, 1263, 1554, 1712, 1950, 2526
AfiI	CCNNNNNNNGG	4 cut(s)	809, 2081, 2258, 2546
AflII	CTTAAG	2 cut(s)	409, 1496
AflIII	ACRYGT	2 cut(s)	321, 1044
AjiI	CACGTC	1 cut(s)	915
AjnI	CCWGG	3 cut(s)	23, 708, 1081
Alw21I	GWGCWC	5 cut(s)	51, 1732, 1782, 2094, 2463
Alw26I	GTCTC	2 cut(s)	1610, 1736
AlwI	GGATC	7 cut(s)	15, 36, 969, 2305, 2318, 2333, 2346
Ama87I	CYCGRG	1 cut(s)	2555
Aor13HI	TCCGGA	1 cut(s)	657
AoxI	GGCC	1 cut(s)	1757
ApeKI	GCWGC	7 cut(s)	740, 838, 980, 1381, 1910, 2221, 2246
ApoI	RAATTY	9 cut(s)	78, 182, 650, 798, 1117, 1460, 1603, 1673, 1968
ArsI	GACNNNNNNTTYG	2 cut(s)	2365, 2397
AspLEI	GCGC	1 cut(s)	945
AspS9I	GGNCC	3 cut(s)	538, 2072, 2549
AsuHPI	GGTGA	7 cut(s)	85, 601, 1409, 1421, 1928, 1948, 1966
AsuII	TTCGAA	1 cut(s)	2291
AsuNHI	GCTAGC	1 cut(s)	1541
AvaI	CYCGRG	1 cut(s)	2555
AvaII	GGWCC	3 cut(s)	538, 2072, 2549
BaeGI	GKGCMC	1 cut(s)	619
BamHI	GGATCC	2 cut(s)	2310, 2338
BanII	GRGCYC	5 cut(s)	51, 559, 1842, 2094, 2463
BarI	GAAGNNNNNNTAC	2 cut(s)	1694, 1726
BauI	CACGAG	2 cut(s)	1548, 2040
BbsI	GAAGAC	4 cut(s)	1582, 2040, 2378, 2497
Bbv12I	GWGCWC	5 cut(s)	51, 1732, 1782, 2094, 2463
BbvI	GCAGC	7 cut(s)	727, 850, 967, 1368, 1897, 2233, 2233
BccI	CCATC	6 cut(s)	1472, 1622, 1692, 1877, 2384, 2391
BceAI	ACGGC	2 cut(s)	1581, 2093
BciT130I	CCWGG	3 cut(s)	25, 710, 1083
BclI	TGATCA	1 cut(s)	64
BcoDI	GTCTC	2 cut(s)	1610, 1736
BfaI	CTAG	8 cut(s)	431, 1542, 1725, 1746, 2162, 2346, 2546, 2596
BfmI	CTRYAG	1 cut(s)	792
BfrI	CTTAAG	2 cut(s)	409, 1496
BglII	AGATCT	1 cut(s)	2348
BisI	GCNGC	8 cut(s)	741, 839, 981, 984, 1382, 1911, 2222, 2247
BlsI	GCNGC	8 cut(s)	742, 840, 982, 985, 1383, 1912, 2223, 2248
Bme1390I	CCNGG	3 cut(s)	25, 710, 1083
Bme18I	GGWCC	3 cut(s)	538, 2072, 2549
BmeT110I	CYCGRG	1 cut(s)	2555
BmgBI	CACGTC	1 cut(s)	915
BmgT120I	GGNCC	3 cut(s)	538, 2072, 2549
BmiI	GGNNCC	3 cut(s)	2074, 2312, 2340
BmrFI	CCNGG	3 cut(s)	25, 710, 1083
BmsI	GCATC	8 cut(s)	678, 945, 1324, 1564, 1829, 2053, 2095, 2233
BmtI	GCTAGC	1 cut(s)	1545
BpiI	GAAGAC	4 cut(s)	1582, 2040, 2378, 2497
BplI	GAGNNNNNCTC	4 cut(s)	2386, 2418, 2549, 2581
BpmI	CTGGAG	1 cut(s)	2001
Bpu10I	CCTNAGC	3 cut(s)	50, 1405, 1995
Bpu14I	TTCGAA	1 cut(s)	2291
BpuEI	CTTGAG	2 cut(s)	450, 1465
Bsa29I	ATCGAT	2 cut(s)	31, 672
BsaAI	YACGTR	1 cut(s)	221
BsaJI	CCNNGG	5 cut(s)	24, 709, 1842, 1978, 2556
BsaWI	WCCGGW	1 cut(s)	657
BsaXI	ACNNNNNCTCC	2 cut(s)	201, 231
Bsc4I	CCNNNNNNNGG	4 cut(s)	809, 2081, 2258, 2546
Bse1I	ACTGG	2 cut(s)	612, 1166
Bse3DI	GCAATG	1 cut(s)	854
BseAI	TCCGGA	1 cut(s)	657
BseBI	CCWGG	3 cut(s)	25, 710, 1083
BseCI	ATCGAT	2 cut(s)	31, 672
BseDI	CCNNGG	5 cut(s)	24, 709, 1842, 1978, 2556
BseGI	GGATG	6 cut(s)	478, 1324, 1633, 1823, 1929, 2422
BseLI	CCNNNNNNNGG	4 cut(s)	809, 2081, 2258, 2546
BseMI	GCAATG	1 cut(s)	854
BseMII	CTCAG	5 cut(s)	64, 116, 1419, 1986, 2107
BseNI	ACTGG	2 cut(s)	612, 1166
BseRI	GAGGAG	3 cut(s)	542, 1754, 2471
BseSI	GKGCMC	1 cut(s)	619
BseXI	GCAGC	7 cut(s)	727, 850, 967, 1368, 1897, 2233, 2233
BsgI	GTGCAG	2 cut(s)	735, 2232
BshFI	GGCC	1 cut(s)	1759
BshVI	ATCGAT	2 cut(s)	31, 672
BsiHKAI	GWGCWC	5 cut(s)	51, 1732, 1782, 2094, 2463
BsiHKCI	CYCGRG	1 cut(s)	2555
BsiSI	CCGG	2 cut(s)	658, 1760
BslFI	GGGAC	1 cut(s)	2058
BslI	CCNNNNNNNGG	4 cut(s)	809, 2081, 2258, 2546
BsmAI	GTCTC	2 cut(s)	1610, 1736
BsmFI	GGGAC	1 cut(s)	2058
BsmI	GAATGC	1 cut(s)	2408
BsnI	GGCC	1 cut(s)	1759
BsoBI	CYCGRG	1 cut(s)	2555
Bsp119I	TTCGAA	1 cut(s)	2291
Bsp1286I	GDGCHC	8 cut(s)	51, 559, 619, 1732, 1782, 1842, 2094, 2463
Bsp13I	TCCGGA	1 cut(s)	657
Bsp1407I	TGTACA	3 cut(s)	1261, 1552, 2524
BspACI	CCGC	6 cut(s)	137, 491, 541, 984, 1613, 2308
BspANI	GGCC	1 cut(s)	1759
BspCNI	CTCAG	5 cut(s)	63, 117, 1418, 1987, 2106
BspDI	ATCGAT	2 cut(s)	31, 672
BspEI	TCCGGA	1 cut(s)	657
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	3 cut(s)	2074, 2312, 2340
BspMAI	CTGCAG	1 cut(s)	796
BspOI	GCTAGC	1 cut(s)	1545
BspPI	GGATC	7 cut(s)	15, 36, 969, 2305, 2318, 2333, 2346
BspQI	GCTCTTC	1 cut(s)	375
BspT104I	TTCGAA	1 cut(s)	2291
BspTI	CTTAAG	2 cut(s)	409, 1496
BsrDI	GCAATG	1 cut(s)	854
BsrGI	TGTACA	3 cut(s)	1261, 1552, 2524
BsrI	ACTGG	2 cut(s)	612, 1166
BssECI	CCNNGG	5 cut(s)	24, 709, 1842, 1978, 2556
BssSI	CACGAG	2 cut(s)	1548, 2040
BssT1I	CCWWGG	2 cut(s)	1842, 1978
Bst2BI	CACGAG	2 cut(s)	1548, 2040
Bst2UI	CCWGG	3 cut(s)	25, 710, 1083
Bst4CI	ACNGT	5 cut(s)	250, 1506, 1721, 1777, 2521
Bst6I	CTCTTC	2 cut(s)	375, 2572
BstAFI	CTTAAG	2 cut(s)	409, 1496
BstAPI	GCANNNNNTGC	1 cut(s)	2051
BstAUI	TGTACA	3 cut(s)	1261, 1552, 2524
BstBAI	YACGTR	1 cut(s)	221
BstBI	TTCGAA	1 cut(s)	2291
BstC8I	GCNNGC	4 cut(s)	1290, 1386, 1543, 2056
BstDEI	CTNAG	6 cut(s)	50, 125, 1101, 1405, 1995, 2093
BstENI	CCTNNNNNAGG	1 cut(s)	2544
BstF5I	GGATG	6 cut(s)	478, 1324, 1633, 1823, 1929, 2422
BstHHI	GCGC	1 cut(s)	945
BstMAI	GTCTC	2 cut(s)	1610, 1736
BstMWI	GCNNNNNNNGC	6 cut(s)	540, 554, 942, 1651, 2051, 2255
BstNI	CCWGG	3 cut(s)	25, 710, 1083
BstNSI	RCATGY	3 cut(s)	311, 325, 1048
BstSCI	CCNGG	3 cut(s)	23, 708, 1081
BstSFI	CTRYAG	1 cut(s)	792
BstSLI	GKGCMC	1 cut(s)	619
BstSNI	TACGTA	1 cut(s)	221
BstV1I	GCAGC	7 cut(s)	727, 850, 967, 1368, 1897, 2233, 2233
BstV2I	GAAGAC	4 cut(s)	1582, 2040, 2378, 2497
BstX2I	RGATCY	5 cut(s)	20, 961, 2310, 2338, 2348
BstYI	RGATCY	5 cut(s)	20, 961, 2310, 2338, 2348
Bsu15I	ATCGAT	2 cut(s)	31, 672
BsuRI	GGCC	1 cut(s)	1759
BsuTUI	ATCGAT	2 cut(s)	31, 672
BtrI	CACGTC	1 cut(s)	915
BtsCI	GGATG	6 cut(s)	478, 1324, 1633, 1823, 1929, 2422
BtsI	GCAGTG	3 cut(s)	543, 671, 1474
BtsIMutI	CAGTG	8 cut(s)	543, 619, 671, 784, 1474, 1591, 1782, 1875
Cac8I	GCNNGC	4 cut(s)	1290, 1386, 1543, 2056
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	1 cut(s)	945
Cfr13I	GGNCC	3 cut(s)	538, 2072, 2549
ClaI	ATCGAT	2 cut(s)	31, 672
CseI	GACGC	2 cut(s)	571, 1634
Csp6I	GTAC	7 cut(s)	218, 551, 1262, 1553, 1711, 1949, 2525
CviQI	GTAC	7 cut(s)	218, 551, 1262, 1553, 1711, 1949, 2525
DdeI	CTNAG	6 cut(s)	50, 125, 1101, 1405, 1995, 2093
EaeI	YGGCCR	1 cut(s)	1757
Eam1104I	CTCTTC	2 cut(s)	375, 2572
EarI	CTCTTC	2 cut(s)	375, 2572
EciI	GGCGGA	1 cut(s)	1628
Ecl136II	GAGCTC	3 cut(s)	49, 2092, 2461
Eco105I	TACGTA	1 cut(s)	221
Eco130I	CCWWGG	2 cut(s)	1842, 1978
Eco24I	GRGCYC	5 cut(s)	51, 559, 1842, 2094, 2463
Eco47I	GGWCC	3 cut(s)	538, 2072, 2549
Eco53kI	GAGCTC	3 cut(s)	49, 2092, 2461
Eco57I	CTGAAG	7 cut(s)	242, 251, 1413, 1721, 1899, 2052, 2223
Eco88I	CYCGRG	1 cut(s)	2555
EcoICRI	GAGCTC	3 cut(s)	49, 2092, 2461
EcoNI	CCTNNNNNAGG	1 cut(s)	2544
EcoO109I	RGGNCCY	2 cut(s)	2072, 2549
EcoRI	GAATTC	2 cut(s)	798, 1673
EcoRII	CCWGG	3 cut(s)	23, 708, 1081
EcoT14I	CCWWGG	2 cut(s)	1842, 1978
EcoT22I	ATGCAT	1 cut(s)	1579
EcoT38I	GRGCYC	5 cut(s)	51, 559, 1842, 2094, 2463
ErhI	CCWWGG	2 cut(s)	1842, 1978
FalI	AAGNNNNNCTT	4 cut(s)	372, 404, 1404, 1436
FaqI	GGGAC	1 cut(s)	2058
FauNDI	CATATG	2 cut(s)	339, 2359
FbaI	TGATCA	1 cut(s)	64
FblI	GTMKAC	2 cut(s)	1486, 1984
Fnu4HI	GCNGC	8 cut(s)	741, 839, 981, 984, 1382, 1911, 2222, 2247
FokI	GGATG	6 cut(s)	485, 1331, 1640, 1810, 1936, 2429
FriOI	GRGCYC	5 cut(s)	51, 559, 1842, 2094, 2463
Fsp4HI	GCNGC	8 cut(s)	741, 839, 981, 984, 1382, 1911, 2222, 2247
FspBI	CTAG	8 cut(s)	431, 1542, 1725, 1746, 2162, 2346, 2546, 2596
FspI	TGCGCA	1 cut(s)	944
GlaI	GCGC	1 cut(s)	944
GluI	GCNGC	8 cut(s)	741, 839, 981, 984, 1382, 1911, 2222, 2247
GsuI	CTGGAG	1 cut(s)	2001
HaeIII	GGCC	1 cut(s)	1759
HapII	CCGG	2 cut(s)	658, 1760
HgaI	GACGC	2 cut(s)	571, 1634
HhaI	GCGC	1 cut(s)	945
Hin6I	GCGC	1 cut(s)	943
HinP1I	GCGC	1 cut(s)	943
HincII	GTYRAC	1 cut(s)	100
HindII	GTYRAC	1 cut(s)	100
HindIII	AAGCTT	5 cut(s)	1005, 1386, 1493, 2078, 2379
HpaI	GTTAAC	1 cut(s)	100
HpaII	CCGG	2 cut(s)	658, 1760
HphI	GGTGA	7 cut(s)	85, 601, 1409, 1421, 1928, 1948, 1966
Hpy166II	GTNNAC	4 cut(s)	100, 1487, 1553, 1985
Hpy188I	TCNGA	9 cut(s)	126, 270, 561, 628, 1333, 1432, 1692, 2096, 2455
Hpy188III	TCNNGA	7 cut(s)	467, 524, 658, 803, 1529, 1863, 2555
Hpy8I	GTNNAC	4 cut(s)	100, 1487, 1553, 1985
HpyAV	CCTTC	7 cut(s)	49, 415, 876, 1696, 1933, 2550, 2592
HpyCH4III	ACNGT	5 cut(s)	250, 1506, 1721, 1777, 2521
HpyCH4IV	ACGT	5 cut(s)	96, 220, 579, 914, 2146
HpyF10VI	GCNNNNNNNGC	6 cut(s)	540, 554, 942, 1651, 2051, 2255
HpyF3I	CTNAG	6 cut(s)	50, 125, 1101, 1405, 1995, 2093
HpySE526I	ACGT	5 cut(s)	96, 220, 579, 914, 2146
HspAI	GCGC	1 cut(s)	943
Kpn2I	TCCGGA	1 cut(s)	657
Ksp22I	TGATCA	1 cut(s)	64
KspAI	GTTAAC	1 cut(s)	100
LguI	GCTCTTC	1 cut(s)	375
LmnI	GCTCC	2 cut(s)	1445, 2458
Lsp1109I	GCAGC	7 cut(s)	727, 850, 967, 1368, 1897, 2233, 2233
LweI	GCATC	8 cut(s)	678, 945, 1324, 1564, 1829, 2053, 2095, 2233
MaeI	CTAG	8 cut(s)	431, 1542, 1725, 1746, 2162, 2346, 2546, 2596
MaeII	ACGT	5 cut(s)	96, 220, 579, 914, 2146
MaeIII	GTNAC	5 cut(s)	607, 910, 1771, 2147, 2298
MfeI	CAATTG	2 cut(s)	132, 1649
MflI	RGATCY	5 cut(s)	20, 961, 2310, 2338, 2348
MhlI	GDGCHC	8 cut(s)	51, 559, 619, 1732, 1782, 1842, 2094, 2463
MlyI	GAGTC	3 cut(s)	457, 2030, 2395
MmeI	TCCRAC	1 cut(s)	562
Mph1103I	ATGCAT	1 cut(s)	1579
MroI	TCCGGA	1 cut(s)	657
MseI	TTAA	9 cut(s)	59, 99, 350, 372, 410, 567, 648, 1121, 1497
MslI	CAYNNNNRTG	1 cut(s)	2229
MspA1I	CMGCKG	3 cut(s)	70, 493, 2021
MspCI	CTTAAG	2 cut(s)	409, 1496
MspI	CCGG	2 cut(s)	658, 1760
MspR9I	CCNGG	3 cut(s)	25, 710, 1083
MunI	CAATTG	2 cut(s)	132, 1649
Mva1269I	GAATGC	1 cut(s)	2408
MvaI	CCWGG	3 cut(s)	25, 710, 1083
MwoI	GCNNNNNNNGC	6 cut(s)	540, 554, 942, 1651, 2051, 2255
NdeI	CATATG	2 cut(s)	339, 2359
NheI	GCTAGC	1 cut(s)	1541
NlaIV	GGNNCC	3 cut(s)	2074, 2312, 2340
NmuCI	GTSAC	3 cut(s)	607, 910, 2147
NsbI	TGCGCA	1 cut(s)	944
NsiI	ATGCAT	1 cut(s)	1579
NspI	RCATGY	3 cut(s)	311, 325, 1048
NspV	TTCGAA	1 cut(s)	2291
PagI	TCATGA	1 cut(s)	523
PciI	ACATGT	2 cut(s)	321, 1044
PciSI	GCTCTTC	1 cut(s)	375
PctI	GAATGC	1 cut(s)	2408
PfeI	GAWTC	8 cut(s)	33, 590, 895, 1322, 1706, 1898, 2180, 2423
PkrI	GCNGC	8 cut(s)	742, 840, 982, 985, 1383, 1912, 2223, 2248
PleI	GAGTC	3 cut(s)	457, 2030, 2395
PpsI	GAGTC	3 cut(s)	457, 2030, 2395
Ppu21I	YACGTR	1 cut(s)	221
PpuMI	RGGWCCY	2 cut(s)	2072, 2549
PscI	ACATGT	2 cut(s)	321, 1044
Psp124BI	GAGCTC	3 cut(s)	51, 2094, 2463
Psp5II	RGGWCCY	2 cut(s)	2072, 2549
Psp6I	CCWGG	3 cut(s)	23, 708, 1081
PspGI	CCWGG	3 cut(s)	23, 708, 1081
PspN4I	GGNNCC	3 cut(s)	2074, 2312, 2340
PspPI	GGNCC	3 cut(s)	538, 2072, 2549
PspPPI	RGGWCCY	2 cut(s)	2072, 2549
PstI	CTGCAG	1 cut(s)	796
PsuI	RGATCY	5 cut(s)	20, 961, 2310, 2338, 2348
PvuII	CAGCTG	2 cut(s)	70, 2021
RsaI	GTAC	7 cut(s)	219, 552, 1263, 1554, 1712, 1950, 2526
RsaNI	GTAC	7 cut(s)	218, 551, 1262, 1553, 1711, 1949, 2525
RseI	CAYNNNNRTG	1 cut(s)	2229
SacI	GAGCTC	3 cut(s)	51, 2094, 2463
SapI	GCTCTTC	1 cut(s)	375
SaqAI	TTAA	9 cut(s)	59, 99, 350, 372, 410, 567, 648, 1121, 1497
SatI	GCNGC	8 cut(s)	741, 839, 981, 984, 1382, 1911, 2222, 2247
Sau96I	GGNCC	3 cut(s)	538, 2072, 2549
SchI	GAGTC	3 cut(s)	457, 2030, 2395
ScrFI	CCNGG	3 cut(s)	25, 710, 1083
SduI	GDGCHC	8 cut(s)	51, 559, 619, 1732, 1782, 1842, 2094, 2463
SfaNI	GCATC	8 cut(s)	678, 945, 1324, 1564, 1829, 2053, 2095, 2233
SfcI	CTRYAG	1 cut(s)	792
SfuI	TTCGAA	1 cut(s)	2291
SinI	GGWCC	3 cut(s)	538, 2072, 2549
SmiMI	CAYNNNNRTG	1 cut(s)	2229
SmlI	CTYRAG	4 cut(s)	409, 465, 1444, 1496
SmoI	CTYRAG	4 cut(s)	409, 465, 1444, 1496
SnaBI	TACGTA	1 cut(s)	221
SsiI	CCGC	6 cut(s)	137, 491, 541, 984, 1613, 2308
SspMI	CTAG	8 cut(s)	431, 1542, 1725, 1746, 2162, 2346, 2546, 2596
SstI	GAGCTC	3 cut(s)	51, 2094, 2463
StyD4I	CCNGG	3 cut(s)	23, 708, 1081
StyI	CCWWGG	2 cut(s)	1842, 1978
TaaI	ACNGT	5 cut(s)	250, 1506, 1721, 1777, 2521
TaiI	ACGT	5 cut(s)	99, 223, 582, 917, 2149
TaqI	TCGA	7 cut(s)	31, 42, 672, 756, 1864, 2291, 2514
TatI	WGTACW	4 cut(s)	1261, 1552, 1948, 2524
TauI	GCSGC	1 cut(s)	986
TfiI	GAWTC	8 cut(s)	33, 590, 895, 1322, 1706, 1898, 2180, 2423
Tru1I	TTAA	9 cut(s)	59, 99, 350, 372, 410, 567, 648, 1121, 1497
Tru9I	TTAA	9 cut(s)	59, 99, 350, 372, 410, 567, 648, 1121, 1497
TscAI	CASTG	8 cut(s)	550, 619, 671, 784, 1474, 1591, 1782, 1882
TseFI	GTSAC	3 cut(s)	607, 910, 2147
TseI	GCWGC	7 cut(s)	740, 838, 980, 1381, 1910, 2221, 2246
Tsp45I	GTSAC	3 cut(s)	607, 910, 2147
TspGWI	ACGGA	3 cut(s)	987, 1467, 2303
TspRI	CASTG	8 cut(s)	550, 619, 671, 784, 1474, 1591, 1782, 1882
Vha464I	CTTAAG	2 cut(s)	409, 1496
VpaK11BI	GGWCC	3 cut(s)	538, 2072, 2549
XagI	CCTNNNNNAGG	1 cut(s)	2544
XapI	RAATTY	9 cut(s)	78, 182, 650, 798, 1117, 1460, 1603, 1673, 1968
XceI	RCATGY	3 cut(s)	311, 325, 1048
XmiI	GTMKAC	2 cut(s)	1486, 1984
XspI	CTAG	8 cut(s)	431, 1542, 1725, 1746, 2162, 2346, 2546, 2596
Zsp2I	ATGCAT	1 cut(s)	1579

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.