pycom13g22530

AP2-like ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
20097561 .. 20100503
2943 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g22530.4

Sequence Viewer

Length: 1605 bp
ATGGATTCTTCTCCTCAAAACTGGCTCCTCGGCTTCTCTCTTTCCAACCACTCTCATCATCATCACCCTTCTCCCGATCTCTCCCTCTTCGAGGCCTTCACCTCCAATTCACCCACCCACTCTGCAGCTACCGTCGCCGGTCACCATCATCAAGGTGCAAGTCCAACTTCAGCAACCGACCTCTCCATCTTCAGTTCCGGAATTACCGGACCAAAGCTCGAGGATTTTCTCGGAGGTTGCACCCCCGCCACCAACACCGTCACCCCGACCTCACTCCCTCGGTTTTCTACTGCCGATCATCATCATCAAACCACTCCTCTCGCTTTGTCCCAAAACGAGATTTACGACTCCGAACTCAAAACCATAGCCGCTAGTTTCCTCCGTGGTTTCTCCACCACCGCTACCACCACCACCACCGCTGCTACTTTACAAACGACCAAACTACAGAACCACCACCCTCTAGCCTCTTCCGATCCCACCCCAAAAAAACCCACCGATACCTTCGGCCAACGCACATCCATTTACCGCGGAGTTACACGGCATAGGTGGACCGGAAGATATGAAGCGCATCTGTGGGATAACAGTTGCAGAAGAGAAGGACAAAGTAGGAAGGGCAGACAAGCGTATGTTAGATTTGAAGTGGCTATATTTGCTATGGTTATTAACTACGAGAAAGAATTGTCGGAGATGAAGAACATGACTAGGCAAGAATTTGTTGCTTCTCTTCGGAGGAAAAGTAGTGGATTTTCTAGAGGAGCTTCTATTTACAGAGGGGTCACAAGGCATCATCAACATGGTAGATGGCAGGCAAGAATAGGAAGGGTTGCAGGCAACAAGGATCTCTACCTTGGCACTTTCAGCACCCAAGAAGAAGCTGCTGAGGCCTATGACATTGCGGCAATCAAGTTCCGAGGCCTAAATGCTGTGACCAACTTCGACATGAGCCGCTACGATGTGAAGAGCATTGCCAGCAGCAACCTTCCCATAGGAGGAATGTCCGGAAAATCCAAAAACTCATCAGACTCCGACAGCAAGAGCATCGAAGGTAATCGTTCAGCCGATGATCGAGATCTCTCCTCTGCATCCTCGGTGACCTTTGCATCTCAACAACCTAGTTCCTCCACACTAAGCTTTGCAATCCCCCTCAAACAAGACCCATCATCAGATTACTGGTCCAACATTTTCGGATATAACCCTTCTCAAAACAATAACAAAAACCCTACTACTGTTTCAGTTGCACCATCATCATCATTGTTCCAGTCACGTGCCATTGGGTCTTATGGTAACAATTCCTCACCAATGCCATTCAACGTGGACTTCTCTTCAACTTTTAGCACTTCTGCTTCTGAAACCAACAATGGGTACTTTGGTAACTTCAATATAGATGGTCAGCGACACCAAGAACAGTTGCAACACCACCAACATGAACAAAGTACTATTACTGGTACTGGTTCAATCCCATTTGCTACACCCATTGCCTTAAATAGCAACAATGGTTATGAAACTTCTTCTGGTTATGGAAGTTGGATTGCGCCAAGTATTCACACATTTCAGACTCATGCAAAGACCAATCTCTTTCAGACACCAATTTTCGGGATGGAATAA

Protein Analysis

535

Amino Acids

58.45

Weight (kDa)

8.66

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011755)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 528
AccIII TCCGGA 2 cut(s) 197, 998
AciI CCGC 8 cut(s) 246, 369, 399, 417, 526, 528, 896, 946
AclWI GGATC 2 cut(s) 467, 846
AcoI YGGCCR 1 cut(s) 505
AcsI RAATTY 1 cut(s) 710
AcuI CTGAAG 2 cut(s) 153, 175
AcvI CACGTG 1 cut(s) 1265
AfaI GTAC 3 cut(s) 1364, 1435, 1447
AfiI CCNNNNNNNGG 4 cut(s) 91, 989, 1359, 1592
AgsI TTSAA 5 cut(s) 638, 1309, 1326, 1378, 1455
AluBI AGCT 5 cut(s) 128, 217, 758, 875, 1131
AluI AGCT 5 cut(s) 128, 217, 758, 875, 1131
AlwI GGATC 2 cut(s) 467, 846
Ama87I CYCGRG 1 cut(s) 218
Aor13HI TCCGGA 2 cut(s) 197, 998
AoxI GGCC 4 cut(s) 93, 505, 882, 913
ApeKI GCWGC 4 cut(s) 125, 419, 875, 972
ApoI RAATTY 1 cut(s) 710
AspLEI GCGC 2 cut(s) 568, 1534
AspS9I GGNCC 3 cut(s) 209, 549, 1173
AsuHPI GGTGA 7 cut(s) 56, 91, 102, 134, 253, 1102, 1287
AvaI CYCGRG 1 cut(s) 218
AvaII GGWCC 3 cut(s) 209, 549, 1173
BaeI ACNNNNGTAYC 2 cut(s) 1354, 1387
BbrPI CACGTG 1 cut(s) 1265
BbvCI CCTCAGC 1 cut(s) 879
BbvI GCAGC 4 cut(s) 137, 406, 862, 984
BccI CCATC 7 cut(s) 153, 194, 795, 1165, 1249, 1379, 1591
BceAI ACGGC 1 cut(s) 554
BcgI CGANNNNNNTGC 2 cut(s) 1021, 1055
BfaI CTAG 5 cut(s) 372, 461, 702, 750, 1113
BfmI CTRYAG 2 cut(s) 123, 443
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 7 cut(s) 126, 369, 420, 876, 897, 946, 973
BlsI GCNGC 7 cut(s) 127, 370, 421, 877, 898, 947, 974
BmcAI AGTACT 1 cut(s) 1435
Bme18I GGWCC 3 cut(s) 209, 549, 1173
BmeT110I CYCGRG 1 cut(s) 218
BmgT120I GGNCC 3 cut(s) 209, 549, 1173
BmiI GGNNCC 1 cut(s) 26
BmsI GCATC 5 cut(s) 577, 793, 1047, 1091, 1109
Bpu10I CCTNAGC 1 cut(s) 879
BsaAI YACGTR 1 cut(s) 1265
BsaBI GATNNNNATC 2 cut(s) 300, 1068
BsaJI CCNNGG 7 cut(s) 28, 278, 382, 526, 847, 910, 1086
BsaWI WCCGGW 4 cut(s) 197, 206, 551, 998
BsaXI ACNNNNNCTCC 2 cut(s) 721, 751
Bsc4I CCNNNNNNNGG 4 cut(s) 91, 989, 1359, 1592
Bse118I RCCGGY 1 cut(s) 137
Bse1I ACTGG 5 cut(s) 26, 1175, 1258, 1447, 1453
Bse3DI GCAATG 3 cut(s) 891, 963, 1473
Bse8I GATNNNNATC 2 cut(s) 300, 1068
BseAI TCCGGA 2 cut(s) 197, 998
BseDI CCNNGG 7 cut(s) 28, 278, 382, 526, 847, 910, 1086
BseGI GGATG 3 cut(s) 515, 1082, 1602
BseJI GATNNNNATC 2 cut(s) 300, 1068
BseLI CCNNNNNNNGG 4 cut(s) 91, 989, 1359, 1592
BseMI GCAATG 3 cut(s) 891, 963, 1473
BseMII CTCAG 1 cut(s) 870
BseNI ACTGG 5 cut(s) 26, 1175, 1258, 1447, 1453
BseRI GAGGAG 4 cut(s) 17, 306, 768, 1066
BseXI GCAGC 4 cut(s) 137, 406, 862, 984
Bsh1236I CGCG 1 cut(s) 528
BshFI GGCC 4 cut(s) 95, 507, 884, 915
BsiHKCI CYCGRG 1 cut(s) 218
BsiSI CCGG 5 cut(s) 138, 198, 207, 552, 999
BslFI GGGAC 1 cut(s) 313
BslI CCNNNNNNNGG 4 cut(s) 91, 989, 1359, 1592
BsmFI GGGAC 1 cut(s) 313
BsnI GGCC 4 cut(s) 95, 507, 884, 915
BsoBI CYCGRG 1 cut(s) 218
Bsp13I TCCGGA 2 cut(s) 197, 998
Bsp143I GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
BspACI CCGC 8 cut(s) 246, 369, 399, 417, 526, 528, 896, 946
BspANI GGCC 4 cut(s) 95, 507, 884, 915
BspCNI CTCAG 1 cut(s) 871
BspEI TCCGGA 2 cut(s) 197, 998
BspFNI CGCG 1 cut(s) 528
BspLI GGNNCC 1 cut(s) 26
BspMAI CTGCAG 1 cut(s) 127
BspPI GGATC 2 cut(s) 467, 846
BspQI GCTCTTC 1 cut(s) 953
BsrDI GCAATG 3 cut(s) 891, 963, 1473
BsrFI RCCGGY 1 cut(s) 137
BsrI ACTGG 5 cut(s) 26, 1175, 1258, 1447, 1453
BssAI RCCGGY 1 cut(s) 137
BssECI CCNNGG 7 cut(s) 28, 278, 382, 526, 847, 910, 1086
BssMI GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
BssT1I CCWWGG 1 cut(s) 847
Bst4CI ACNGT 5 cut(s) 133, 259, 584, 1228, 1407
Bst6I CTCTTC 6 cut(s) 92, 472, 586, 729, 953, 1327
BstBAI YACGTR 1 cut(s) 1265
BstC8I GCNNGC 3 cut(s) 807, 829, 970
BstDEI CTNAG 2 cut(s) 879, 1127
BstDSI CCRYGG 2 cut(s) 382, 526
BstEII GGTNACC 2 cut(s) 140, 1090
BstENI CCTNNNNNAGG 1 cut(s) 89
BstF5I GGATG 3 cut(s) 515, 1082, 1602
BstFNI CGCG 1 cut(s) 528
BstHHI GCGC 2 cut(s) 568, 1534
BstKTI GATC 6 cut(s) 79, 298, 475, 841, 1066, 1072
BstMBI GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
BstMWI GCNNNNNNNGC 5 cut(s) 134, 650, 858, 881, 969
BstPI GGTNACC 2 cut(s) 140, 1090
BstSFI CTRYAG 2 cut(s) 123, 443
BstUI CGCG 1 cut(s) 528
BstV1I GCAGC 4 cut(s) 137, 406, 862, 984
BstX2I RGATCY 2 cut(s) 838, 1069
BstYI RGATCY 2 cut(s) 838, 1069
BsuRI GGCC 4 cut(s) 95, 507, 884, 915
BtgI CCRYGG 2 cut(s) 382, 526
BtsCI GGATG 3 cut(s) 515, 1082, 1602
Cac8I GCNNGC 3 cut(s) 807, 829, 970
CfoI GCGC 2 cut(s) 568, 1534
Cfr10I RCCGGY 1 cut(s) 137
Cfr13I GGNCC 3 cut(s) 209, 549, 1173
Cfr42I CCGCGG 1 cut(s) 529
Csp6I GTAC 3 cut(s) 1363, 1434, 1446
CviAII CATG 5 cut(s) 697, 794, 940, 1424, 1559
CviQI GTAC 3 cut(s) 1363, 1434, 1446
DdeI CTNAG 2 cut(s) 879, 1127
DpnI GATC 6 cut(s) 78, 297, 474, 840, 1065, 1071
DpnII GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
EaeI YGGCCR 1 cut(s) 505
Eam1104I CTCTTC 6 cut(s) 92, 472, 586, 729, 953, 1327
EarI CTCTTC 6 cut(s) 92, 472, 586, 729, 953, 1327
Eco130I CCWWGG 1 cut(s) 847
Eco147I AGGCCT 3 cut(s) 95, 884, 915
Eco47I GGWCC 3 cut(s) 209, 549, 1173
Eco57I CTGAAG 2 cut(s) 153, 175
Eco72I CACGTG 1 cut(s) 1265
Eco88I CYCGRG 1 cut(s) 218
Eco91I GGTNACC 2 cut(s) 140, 1090
EcoNI CCTNNNNNAGG 1 cut(s) 89
EcoO65I GGTNACC 2 cut(s) 140, 1090
EcoT14I CCWWGG 1 cut(s) 847
ErhI CCWWGG 1 cut(s) 847
FaeI CATG 5 cut(s) 700, 797, 943, 1427, 1562
FalI AAGNNNNNCTT 2 cut(s) 151, 183
FaqI GGGAC 1 cut(s) 313
FatI CATG 5 cut(s) 696, 793, 939, 1423, 1558
FauI CCCGC 1 cut(s) 253
Fnu4HI GCNGC 7 cut(s) 126, 369, 420, 876, 897, 946, 973
FokI GGATG 2 cut(s) 502, 1069
Fsp4HI GCNGC 7 cut(s) 126, 369, 420, 876, 897, 946, 973
FspBI CTAG 5 cut(s) 372, 461, 702, 750, 1113
GlaI GCGC 2 cut(s) 567, 1533
GluI GCNGC 7 cut(s) 126, 369, 420, 876, 897, 946, 973
HaeIII GGCC 4 cut(s) 95, 507, 884, 915
HapII CCGG 5 cut(s) 138, 198, 207, 552, 999
HhaI GCGC 2 cut(s) 568, 1534
Hin1II CATG 5 cut(s) 700, 797, 943, 1427, 1562
Hin6I GCGC 2 cut(s) 566, 1532
HinP1I GCGC 2 cut(s) 566, 1532
HindIII AAGCTT 1 cut(s) 1129
HinfI GANTC 4 cut(s) 5, 347, 1022, 1555
HpaII CCGG 5 cut(s) 138, 198, 207, 552, 999
HphI GGTGA 7 cut(s) 56, 91, 102, 134, 253, 1102, 1287
Hpy166II GTNNAC 2 cut(s) 549, 1315
Hpy188III TCNNGA 6 cut(s) 74, 198, 750, 999, 1067, 1594
Hpy8I GTNNAC 2 cut(s) 549, 1315
Hpy99I CGWCG 1 cut(s) 137
HpyAV CCTTC 9 cut(s) 78, 106, 511, 590, 604, 813, 989, 1037, 1206
HpyCH4III ACNGT 5 cut(s) 133, 259, 584, 1228, 1407
HpyCH4IV ACGT 2 cut(s) 1264, 1311
HpyF10VI GCNNNNNNNGC 5 cut(s) 134, 650, 858, 881, 969
HpyF3I CTNAG 2 cut(s) 879, 1127
HpySE526I ACGT 2 cut(s) 1264, 1311
Hsp92II CATG 5 cut(s) 700, 797, 943, 1427, 1562
HspAI GCGC 2 cut(s) 566, 1532
Kpn2I TCCGGA 2 cut(s) 197, 998
KspI CCGCGG 1 cut(s) 529
Kzo9I GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
LguI GCTCTTC 1 cut(s) 953
LmnI GCTCC 2 cut(s) 30, 755
Lsp1109I GCAGC 4 cut(s) 137, 406, 862, 984
LweI GCATC 5 cut(s) 577, 793, 1047, 1091, 1109
MaeI CTAG 5 cut(s) 372, 461, 702, 750, 1113
MaeII ACGT 2 cut(s) 1264, 1311
MaeIII GTNAC 9 cut(s) 140, 259, 532, 775, 925, 1090, 1260, 1283, 1370
MalI GATC 6 cut(s) 78, 297, 474, 840, 1065, 1071
MboI GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
MflI RGATCY 2 cut(s) 838, 1069
MluCI AATT 6 cut(s) 106, 201, 677, 710, 1288, 1587
MlyI GAGTC 3 cut(s) 341, 1016, 1549
MmeI TCCRAC 6 cut(s) 69, 188, 663, 1050, 1200, 1505
MroI TCCGGA 2 cut(s) 197, 998
MseI TTAA 2 cut(s) 663, 1481
MslI CAYNNNNRTG 3 cut(s) 153, 792, 1422
MspA1I CMGCKG 2 cut(s) 419, 528
MspI CCGG 5 cut(s) 138, 198, 207, 552, 999
MvnI CGCG 1 cut(s) 528
MwoI GCNNNNNNNGC 5 cut(s) 134, 650, 858, 881, 969
NdeII GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
NlaIII CATG 5 cut(s) 700, 797, 943, 1427, 1562
NlaIV GGNNCC 1 cut(s) 26
NmeAIII GCCGAG 1 cut(s) 9
NmuCI GTSAC 6 cut(s) 140, 259, 775, 925, 1090, 1260
PaeR7I CTCGAG 1 cut(s) 218
PceI AGGCCT 3 cut(s) 95, 884, 915
PciSI GCTCTTC 1 cut(s) 953
PcsI WCGNNNNNNNCGW 1 cut(s) 342
PfeI GAWTC 1 cut(s) 5
PkrI GCNGC 7 cut(s) 127, 370, 421, 877, 898, 947, 974
PleI GAGTC 3 cut(s) 341, 1016, 1549
PmaCI CACGTG 1 cut(s) 1265
PmlI CACGTG 1 cut(s) 1265
PpsI GAGTC 3 cut(s) 341, 1016, 1549
Ppu21I YACGTR 1 cut(s) 1265
PspCI CACGTG 1 cut(s) 1265
PspEI GGTNACC 2 cut(s) 140, 1090
PspN4I GGNNCC 1 cut(s) 26
PspPI GGNCC 3 cut(s) 209, 549, 1173
PspXI VCTCGAGB 1 cut(s) 218
PstI CTGCAG 1 cut(s) 127
PsuI RGATCY 2 cut(s) 838, 1069
RsaI GTAC 3 cut(s) 1364, 1435, 1447
RsaNI GTAC 3 cut(s) 1363, 1434, 1446
RseI CAYNNNNRTG 3 cut(s) 153, 792, 1422
SacII CCGCGG 1 cut(s) 529
SapI GCTCTTC 1 cut(s) 953
SaqAI TTAA 2 cut(s) 663, 1481
SatI GCNGC 7 cut(s) 126, 369, 420, 876, 897, 946, 973
Sau3AI GATC 6 cut(s) 76, 295, 472, 838, 1063, 1069
Sau96I GGNCC 3 cut(s) 209, 549, 1173
ScaI AGTACT 1 cut(s) 1435
SchI GAGTC 3 cut(s) 341, 1016, 1549
SfaNI GCATC 5 cut(s) 577, 793, 1047, 1091, 1109
SfcI CTRYAG 2 cut(s) 123, 443
Sfr274I CTCGAG 1 cut(s) 218
Sfr303I CCGCGG 1 cut(s) 529
SgrBI CCGCGG 1 cut(s) 529
SinI GGWCC 3 cut(s) 209, 549, 1173
SlaI CTCGAG 1 cut(s) 218
SmiMI CAYNNNNRTG 3 cut(s) 153, 792, 1422
SmlI CTYRAG 1 cut(s) 218
SmoI CTYRAG 1 cut(s) 218
Sse9I AATT 6 cut(s) 106, 201, 677, 710, 1288, 1587
SseBI AGGCCT 3 cut(s) 95, 884, 915
SsiI CCGC 8 cut(s) 246, 369, 399, 417, 526, 528, 896, 946
SspMI CTAG 5 cut(s) 372, 461, 702, 750, 1113
StuI AGGCCT 3 cut(s) 95, 884, 915
StyI CCWWGG 1 cut(s) 847
TaaI ACNGT 5 cut(s) 133, 259, 584, 1228, 1407
TaiI ACGT 2 cut(s) 1267, 1314
TaqI TCGA 5 cut(s) 90, 219, 936, 1041, 1066
TasI AATT 6 cut(s) 106, 201, 677, 710, 1288, 1587
TatI WGTACW 1 cut(s) 1433
TauI GCSGC 3 cut(s) 371, 899, 948
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 2 cut(s) 663, 1481
Tru9I TTAA 2 cut(s) 663, 1481
TseFI GTSAC 6 cut(s) 140, 259, 775, 925, 1090, 1260
TseI GCWGC 4 cut(s) 125, 419, 875, 972
Tsp45I GTSAC 6 cut(s) 140, 259, 775, 925, 1090, 1260
TspDTI ATGAA 4 cut(s) 576, 704, 1440, 1515
TspGWI ACGGA 1 cut(s) 371
VpaK11BI GGWCC 3 cut(s) 209, 549, 1173
XagI CCTNNNNNAGG 1 cut(s) 89
XapI RAATTY 1 cut(s) 710
XbaI TCTAGA 1 cut(s) 749
XhoI CTCGAG 1 cut(s) 218
XspI CTAG 5 cut(s) 372, 461, 702, 750, 1113
ZrmI AGTACT 1 cut(s) 1435
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.