Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0011755

Physical Location & Seq

Genomic Coordinates Reverse (-)

19704646 .. 19707919

Gene Structure 3274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G008900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGATTCTAATTCCCCTCCTCCTCATCATCATCATCATCCTCAGAACTGGCTCGGTTTCTCTCTTTCCAACCACTTCTCCTCTCCCCCTCATAACTCCCACCTCTCTCTCTTCGAGGCCTTCACCTCCTCTCCAGACGCCGGGGTTAACTCTGCGGCGTCGGATCATCATCAAGATGCACATGCAGGTGCAACTGAGACCGATCTCTCCATCTTCAGCGGAGTCGGCCCGAAGCTCGAGGACTTTCTCGGTGGTGGCTGCACCACCACCACCACCACCACCGCTGGCGTCGCAACCGCCACAGCCGACGTCATCACTACCGCATCGGTAACCCCGACGTCGCTCACTGCCTTCTCATCTACTAACGATCATCTCGCTGTGTCCGAAAATGAGATTTACGACTCCGAACTCAAAACCATAGCCGCTAGCTTCCTCCGTGGTTTCTCCACCGCCCCTACCGCCACCGCCACCGCCACCACTACTCTGCAGCACGCCAAACCCCAAATCCACAACCACCCCGTGGGGACCACCGAAACCGCCACCATCAAGAAAACCGTGGACACCTTCGGTCAGCGCACCTCGATTTACCGTGGCGTTACAAGGCATAGGTGGACAGGAAGATATGAAGCTCATCTGTGGGATAACAGTTGCAGAAGAGAAGGGCAAAGCAGGAAAGGAAGACAAGTTTATTTGGGTGGTTACGATAAAGAAGACAAAGCAGCAAGAGCCTACGATCTAGCAGCTCTCAAGTACTGGGGTCCGACCACCACCACAAACTTTCCGGTTACCAACTATGAGAAGGAATTGGTGGGGATGAAGAATATGTCTAGGCAGGAATTTGTTGCTTCCCTTAGAAGGAAAAGTAGTGGATTTTCTAGAGGAGCCTCGATTTACAGAGGGGTGACAAGGCACCATCAACATGGTAGATGGCAGGCAAGAATAGGAAGGGTTGCTGGCAACAAAGATCTCTACCTAGGCACTTTCAGTACGCAAGAAGAAGCTGCCGAGGCCTATGACATTGCAGCCATCAAGTTCCGAGGCTTAAATGCGGTCACTAACTTCGATATGAGCCGCTACGATGTGAATAGCATTGCCAACAGCAACCTCCCGATCGGAGGAATGTCTGGAAAATCCAAGAACTCATCCGATCAATCCCTCTCTGCTGATAGCAAGAGCCTTGATGATAGAGACCTCTCCTCAGCATCCTCCGTAACCTTTGCGTCGTCATCTCATCAACCTAGTAATTCCTCCACATTGAGCTTTGCAATTCCCATCAAACAAGACCCGTCCTCAGAGTACTGGTCCAATATCTTTGGGTACCATGTGCCAAACAACAACCCTTCCCTAAACAATGTCAGGAACCCTAACAGTGTTGGGATCGCACCAACCTATTTTCACAGCAACATGGATTTCTCTGCGACATCAAGTACTGCTACTACAACCTCGGAAGCCAACAATGGGTTATTCTACAGTGGGGGATACAACGTCCATGGCCAACAGCAGCAACAACAACAACAAAGTACTAGCAGTGGTACTAATAATTCAATCCCCTTCTCCACACCTCTTGGTTTAAGTAGTAACATGGGTTATGATCAAGGTTCTTCTGGTTATGGAACATGGATAGGGCCAAGTCTTAATCTCTTTCAGACTCCAATTTTTGGCATGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009845 GO:0009889 GO:0009956 GO:0009987 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0040019 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045995 GO:0048364 GO:0048518 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051716 GO:0060255 GO:0060771 GO:0060772 GO:0060774 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0090351 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

556

Amino Acids

60.12

Weight (kDa)

6.78

Isoelectric Point (pI)

41.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	196 - 253	1.1e-10	AP2 domain
AP2	PF00847	298 - 347	6.4e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011755)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57390
fragaria_vesca	FvH4_4g08100
malus_domestica	MD13G1252700.v1.1
prunus_persica	Prupe.1G084900_v2.0.a1
pyrus_communis	pycom13g22530
rosa_chinensis	RchiOBHm_Chr4g0401801
rosa_laevigata	RLG00000009119
rosa_multiflora	Rmu_sc0001405.1_g000041
rosa_roxburghii	Rroxscaffold_5G00346370
rosa_rugosa	Rorug04G0033300
rosa_samantha	Rh4AG109500 Rh4AG109600 Rh4BG103500 Rh4BG103600 Rh4CG117600 Rh4CG117700 Rh4DG101300 Rh4DG101400
rosa_wichuraiana	Rw4G008900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	176
AatII	GACGTC	2 cut(s)	312, 341
Acc36I	ACCTGC	1 cut(s)	176
Acc65I	GGTACC	1 cut(s)	1317
AccB1I	GGYRCC	2 cut(s)	909, 1317
AccB7I	CCANNNNNTGG	2 cut(s)	520, 1658
AclWI	GGATC	2 cut(s)	171, 1385
AcoI	YGGCCR	1 cut(s)	1492
AcsI	RAATTY	1 cut(s)	836
AcuI	CTGAAG	1 cut(s)	199
AcyI	GRCGYC	5 cut(s)	138, 158, 288, 309, 338
AdeI	CACNNNGTG	1 cut(s)	520
AfaI	GTAC	7 cut(s)	752, 988, 1298, 1319, 1429, 1522, 1534
AfiI	CCNNNNNNNGG	6 cut(s)	140, 520, 855, 1115, 1458, 1658
AgsI	TTSAA	1 cut(s)	1545
AluBI	AGCT	6 cut(s)	235, 429, 629, 743, 1001, 1260
AluI	AGCT	6 cut(s)	235, 429, 629, 743, 1001, 1260
Alw26I	GTCTC	2 cut(s)	191, 1182
AlwI	GGATC	2 cut(s)	171, 1385
Ama87I	CYCGRG	1 cut(s)	236
AoxI	GGCC	5 cut(s)	117, 226, 1008, 1492, 1625
ApeKI	GCWGC	7 cut(s)	258, 487, 719, 740, 1001, 1022, 1501
ApoI	RAATTY	1 cut(s)	836
Asp718I	GGTACC	1 cut(s)	1317
AspA2I	CCTAGG	1 cut(s)	973
AspLEI	GCGC	1 cut(s)	576
AspS9I	GGNCC	5 cut(s)	227, 525, 758, 1302, 1625
AsuC2I	CCSGG	1 cut(s)	142
AsuHPI	GGTGA	2 cut(s)	115, 913
AsuNHI	GCTAGC	1 cut(s)	425
AvaI	CYCGRG	1 cut(s)	236
AvaII	GGWCC	3 cut(s)	525, 758, 1302
AvrII	CCTAGG	1 cut(s)	973
BalI	TGGCCA	1 cut(s)	1494
BanI	GGYRCC	2 cut(s)	909, 1317
BbsI	GAAGAC	2 cut(s)	685, 717
BbvCI	CCTCAGC	1 cut(s)	1198
BbvI	GCAGC	7 cut(s)	245, 499, 731, 752, 988, 1034, 1513
BccI	CCATC	6 cut(s)	218, 551, 921, 921, 1034, 1280
BciVI	GTATCC	1 cut(s)	1472
BclI	TGATCA	1 cut(s)	1591
BcnI	CCSGG	1 cut(s)	142
BcoDI	GTCTC	2 cut(s)	191, 1182
BfaI	CTAG	7 cut(s)	426, 737, 828, 876, 974, 1239, 1524
BfmI	CTRYAG	2 cut(s)	485, 1468
BfuAI	ACCTGC	1 cut(s)	176
BfuI	GTATCC	1 cut(s)	1472
BglII	AGATCT	1 cut(s)	964
BlnI	CCTAGG	1 cut(s)	973
BmcAI	AGTACT	4 cut(s)	752, 1298, 1429, 1522
Bme1390I	CCNGG	1 cut(s)	142
Bme18I	GGWCC	3 cut(s)	525, 758, 1302
BmeT110I	CYCGRG	1 cut(s)	236
BmgT120I	GGNCC	5 cut(s)	227, 525, 758, 1302, 1625
BmiI	GGNNCC	6 cut(s)	526, 759, 883, 911, 1319, 1361
BmrFI	CCNGG	1 cut(s)	142
BmrI	ACTGGG	1 cut(s)	763
BmsI	GCATC	3 cut(s)	166, 332, 1211
BmtI	GCTAGC	1 cut(s)	429
BmuI	ACTGGG	1 cut(s)	763
BpiI	GAAGAC	2 cut(s)	685, 717
BpmI	CTGGAG	1 cut(s)	117
Bpu10I	CCTNAGC	1 cut(s)	1198
BpuEI	CTTGAG	1 cut(s)	731
BpuMI	CCSGG	1 cut(s)	142
BsaBI	GATNNNNATC	1 cut(s)	168
BsaHI	GRCGYC	5 cut(s)	138, 158, 288, 309, 338
BsaI	GGTCTC	2 cut(s)	191, 1182
BsaWI	WCCGGW	1 cut(s)	781
BsaXI	ACNNNNNCTCC	4 cut(s)	62, 92, 115, 145
Bsc4I	CCNNNNNNNGG	6 cut(s)	140, 520, 855, 1115, 1458, 1658
Bse1I	ACTGG	3 cut(s)	53, 758, 1304
Bse3DI	GCAATG	2 cut(s)	1017, 1089
Bse8I	GATNNNNATC	1 cut(s)	168
BseGI	GGATG	4 cut(s)	37, 819, 1142, 1202
BseJI	GATNNNNATC	1 cut(s)	168
BseLI	CCNNNNNNNGG	6 cut(s)	140, 520, 855, 1115, 1458, 1658
BseMI	GCAATG	2 cut(s)	1017, 1089
BseMII	CTCAG	4 cut(s)	56, 186, 1212, 1305
BseNI	ACTGG	3 cut(s)	53, 758, 1304
BseRI	GAGGAG	6 cut(s)	9, 12, 70, 118, 894, 1186
BseXI	GCAGC	7 cut(s)	245, 499, 731, 752, 988, 1034, 1513
BsgI	GTGCAG	1 cut(s)	244
Bsh1285I	CGRYCG	1 cut(s)	1113
BshFI	GGCC	5 cut(s)	119, 228, 1010, 1494, 1627
BshNI	GGYRCC	2 cut(s)	909, 1317
BsiEI	CGRYCG	1 cut(s)	1113
BsiHKCI	CYCGRG	1 cut(s)	236
BsiSI	CCGG	2 cut(s)	141, 782
BslFI	GGGAC	1 cut(s)	538
BslI	CCNNNNNNNGG	6 cut(s)	140, 520, 855, 1115, 1458, 1658
BsmAI	GTCTC	2 cut(s)	191, 1182
BsmFI	GGGAC	1 cut(s)	538
BsnI	GGCC	5 cut(s)	119, 228, 1010, 1494, 1627
Bso31I	GGTCTC	2 cut(s)	191, 1182
BsoBI	CYCGRG	1 cut(s)	236
Bsp143I	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
Bsp19I	CCATGG	1 cut(s)	1489
BspANI	GGCC	5 cut(s)	119, 228, 1010, 1494, 1627
BspCNI	CTCAG	4 cut(s)	55, 187, 1211, 1304
BspLI	GGNNCC	6 cut(s)	526, 759, 883, 911, 1319, 1361
BspMAI	CTGCAG	1 cut(s)	489
BspMI	ACCTGC	1 cut(s)	176
BspOI	GCTAGC	1 cut(s)	429
BspPI	GGATC	2 cut(s)	171, 1385
BspT107I	GGYRCC	2 cut(s)	909, 1317
BspTNI	GGTCTC	2 cut(s)	191, 1182
BsrDI	GCAATG	2 cut(s)	1017, 1089
BsrI	ACTGG	3 cut(s)	53, 758, 1304
BssMI	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
BssNI	GRCGYC	5 cut(s)	138, 158, 288, 309, 338
BssT1I	CCWWGG	2 cut(s)	973, 1489
Bst4CI	ACNGT	5 cut(s)	556, 590, 647, 1370, 1472
Bst6I	CTCTTC	2 cut(s)	116, 649
BstACI	GRCGYC	5 cut(s)	138, 158, 288, 309, 338
BstC8I	GCNNGC	5 cut(s)	286, 427, 492, 933, 955
BstDEI	CTNAG	5 cut(s)	42, 195, 851, 1198, 1291
BstDSI	CCRYGG	5 cut(s)	436, 519, 555, 589, 1489
BstEII	GGTNACC	2 cut(s)	328, 784
BstF5I	GGATG	4 cut(s)	37, 819, 1142, 1202
BstHHI	GCGC	1 cut(s)	576
BstKTI	GATC	9 cut(s)	166, 205, 370, 736, 967, 1113, 1150, 1380, 1594
BstMAI	GTCTC	2 cut(s)	191, 1182
BstMBI	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
BstMCI	CGRYCG	1 cut(s)	1113
BstMWI	GCNNNNNNNGC	5 cut(s)	225, 290, 458, 725, 1007
BstNSI	RCATGY	1 cut(s)	185
BstPI	GGTNACC	2 cut(s)	328, 784
BstSCI	CCNGG	1 cut(s)	140
BstSFI	CTRYAG	2 cut(s)	485, 1468
BstV1I	GCAGC	7 cut(s)	245, 499, 731, 752, 988, 1034, 1513
BstV2I	GAAGAC	2 cut(s)	685, 717
BstX2I	RGATCY	1 cut(s)	964
BstXI	CCANNNNNNTGG	1 cut(s)	920
BstYI	RGATCY	1 cut(s)	964
BsuI	GTATCC	1 cut(s)	1472
BsuRI	GGCC	5 cut(s)	119, 228, 1010, 1494, 1627
BtgI	CCRYGG	5 cut(s)	436, 519, 555, 589, 1489
BtsCI	GGATG	4 cut(s)	37, 819, 1142, 1202
BtsI	GCAGTG	2 cut(s)	345, 1534
BtsIMutI	CAGTG	4 cut(s)	345, 1375, 1477, 1534
BveI	ACCTGC	1 cut(s)	176
Cac8I	GCNNGC	5 cut(s)	286, 427, 492, 933, 955
CfoI	GCGC	1 cut(s)	576
Cfr13I	GGNCC	5 cut(s)	227, 525, 758, 1302, 1625
CseI	GACGC	4 cut(s)	146, 147, 277, 1209
Csp6I	GTAC	7 cut(s)	751, 987, 1297, 1318, 1428, 1521, 1533
CspCI	CAANNNNNGTGG	2 cut(s)	1546, 1581
CviAII	CATG	8 cut(s)	182, 920, 1322, 1405, 1490, 1582, 1617, 1663
CviQI	GTAC	7 cut(s)	751, 987, 1297, 1318, 1428, 1521, 1533
DdeI	CTNAG	5 cut(s)	42, 195, 851, 1198, 1291
DpnI	GATC	9 cut(s)	165, 204, 369, 735, 966, 1112, 1149, 1379, 1593
DpnII	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
DraIII	CACNNNGTG	1 cut(s)	520
EaeI	YGGCCR	1 cut(s)	1492
Eam1104I	CTCTTC	2 cut(s)	116, 649
EarI	CTCTTC	2 cut(s)	116, 649
Eco130I	CCWWGG	2 cut(s)	973, 1489
Eco147I	AGGCCT	2 cut(s)	119, 1010
Eco31I	GGTCTC	2 cut(s)	191, 1182
Eco47I	GGWCC	3 cut(s)	525, 758, 1302
Eco57I	CTGAAG	1 cut(s)	199
Eco88I	CYCGRG	1 cut(s)	236
Eco91I	GGTNACC	2 cut(s)	328, 784
EcoO65I	GGTNACC	2 cut(s)	328, 784
EcoT14I	CCWWGG	2 cut(s)	973, 1489
ErhI	CCWWGG	2 cut(s)	973, 1489
FaeI	CATG	8 cut(s)	185, 923, 1325, 1408, 1493, 1585, 1620, 1666
FaqI	GGGAC	1 cut(s)	538
FatI	CATG	8 cut(s)	181, 919, 1321, 1404, 1489, 1581, 1616, 1662
FbaI	TGATCA	1 cut(s)	1591
FokI	GGATG	4 cut(s)	24, 826, 1129, 1189
FspBI	CTAG	7 cut(s)	426, 737, 828, 876, 974, 1239, 1524
GlaI	GCGC	1 cut(s)	575
GsuI	CTGGAG	1 cut(s)	117
HaeIII	GGCC	5 cut(s)	119, 228, 1010, 1494, 1627
HapII	CCGG	2 cut(s)	141, 782
HgaI	GACGC	4 cut(s)	146, 147, 277, 1209
HhaI	GCGC	1 cut(s)	576
Hin1I	GRCGYC	5 cut(s)	138, 158, 288, 309, 338
Hin1II	CATG	8 cut(s)	185, 923, 1325, 1408, 1493, 1585, 1620, 1666
Hin6I	GCGC	1 cut(s)	574
HinP1I	GCGC	1 cut(s)	574
HincII	GTYRAC	1 cut(s)	148
HindII	GTYRAC	1 cut(s)	148
HinfI	GANTC	4 cut(s)	5, 222, 401, 1648
HpaI	GTTAAC	1 cut(s)	148
HpaII	CCGG	2 cut(s)	141, 782
HphI	GGTGA	2 cut(s)	115, 913
Hpy166II	GTNNAC	3 cut(s)	148, 559, 612
Hpy188III	TCNNGA	7 cut(s)	134, 173, 547, 876, 1108, 1125, 1357
Hpy8I	GTNNAC	3 cut(s)	148, 559, 612
Hpy99I	CGWCG	6 cut(s)	163, 293, 311, 340, 343, 1225
HpyAV	CCTTC	9 cut(s)	130, 361, 574, 653, 793, 849, 939, 1350, 1561
HpyCH4III	ACNGT	5 cut(s)	556, 590, 647, 1370, 1472
HpyCH4IV	ACGT	3 cut(s)	309, 338, 1485
HpyCH4V	TGCA	8 cut(s)	179, 185, 191, 261, 487, 651, 1022, 1265
HpyF10VI	GCNNNNNNNGC	5 cut(s)	225, 290, 458, 725, 1007
HpyF3I	CTNAG	5 cut(s)	42, 195, 851, 1198, 1291
HpySE526I	ACGT	3 cut(s)	309, 338, 1485
Hsp92I	GRCGYC	5 cut(s)	138, 158, 288, 309, 338
Hsp92II	CATG	8 cut(s)	185, 923, 1325, 1408, 1493, 1585, 1620, 1666
HspAI	GCGC	1 cut(s)	574
KpnI	GGTACC	1 cut(s)	1321
Ksp22I	TGATCA	1 cut(s)	1591
KspAI	GTTAAC	1 cut(s)	148
Kzo9I	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
LmnI	GCTCC	1 cut(s)	881
Lsp1109I	GCAGC	7 cut(s)	245, 499, 731, 752, 988, 1034, 1513
LweI	GCATC	3 cut(s)	166, 332, 1211
MaeI	CTAG	7 cut(s)	426, 737, 828, 876, 974, 1239, 1524
MaeII	ACGT	3 cut(s)	309, 338, 1485
MaeIII	GTNAC	8 cut(s)	328, 595, 698, 784, 901, 1051, 1210, 1577
MalI	GATC	9 cut(s)	165, 204, 369, 735, 966, 1112, 1149, 1379, 1593
MboI	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
MboII	GAAGA	9 cut(s)	103, 205, 630, 666, 690, 722, 829, 1007, 1593
MflI	RGATCY	1 cut(s)	964
MlsI	TGGCCA	1 cut(s)	1494
MluCI	AATT	7 cut(s)	10, 803, 836, 1243, 1266, 1540, 1653
MluNI	TGGCCA	1 cut(s)	1494
MlyI	GAGTC	3 cut(s)	231, 395, 1642
MmeI	TCCRAC	3 cut(s)	93, 141, 785
Mox20I	TGGCCA	1 cut(s)	1494
MscI	TGGCCA	1 cut(s)	1494
MseI	TTAA	4 cut(s)	147, 1043, 1571, 1635
MslI	CAYNNNNRTG	3 cut(s)	174, 186, 918
Msp20I	TGGCCA	1 cut(s)	1494
MspA1I	CMGCKG	2 cut(s)	219, 284
MspI	CCGG	2 cut(s)	141, 782
MspR9I	CCNGG	1 cut(s)	142
MwoI	GCNNNNNNNGC	5 cut(s)	225, 290, 458, 725, 1007
NciI	CCSGG	1 cut(s)	142
NcoI	CCATGG	1 cut(s)	1489
NdeII	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
NheI	GCTAGC	1 cut(s)	425
NlaIII	CATG	8 cut(s)	185, 923, 1325, 1408, 1493, 1585, 1620, 1666
NlaIV	GGNNCC	6 cut(s)	526, 759, 883, 911, 1319, 1361
NmeAIII	GCCGAG	1 cut(s)	1030
NmuCI	GTSAC	2 cut(s)	901, 1051
NspI	RCATGY	1 cut(s)	185
PaeR7I	CTCGAG	1 cut(s)	236
PaqCI	CACCTGC	1 cut(s)	176
PceI	AGGCCT	2 cut(s)	119, 1010
PcsI	WCGNNNNNNNCGW	2 cut(s)	332, 381
PfeI	GAWTC	1 cut(s)	5
PflMI	CCANNNNNTGG	2 cut(s)	520, 1658
Ple19I	CGATCG	1 cut(s)	1113
PleI	GAGTC	3 cut(s)	230, 395, 1642
PpsI	GAGTC	3 cut(s)	230, 395, 1642
PspEI	GGTNACC	2 cut(s)	328, 784
PspN4I	GGNNCC	6 cut(s)	526, 759, 883, 911, 1319, 1361
PspPI	GGNCC	5 cut(s)	227, 525, 758, 1302, 1625
PspXI	VCTCGAGB	1 cut(s)	236
PstI	CTGCAG	1 cut(s)	489
PsuI	RGATCY	1 cut(s)	964
PvuI	CGATCG	1 cut(s)	1113
RsaI	GTAC	7 cut(s)	752, 988, 1298, 1319, 1429, 1522, 1534
RsaNI	GTAC	7 cut(s)	751, 987, 1297, 1318, 1428, 1521, 1533
RseI	CAYNNNNRTG	3 cut(s)	174, 186, 918
SaqAI	TTAA	4 cut(s)	147, 1043, 1571, 1635
Sau3AI	GATC	9 cut(s)	163, 202, 367, 733, 964, 1110, 1147, 1377, 1591
Sau96I	GGNCC	5 cut(s)	227, 525, 758, 1302, 1625
ScaI	AGTACT	4 cut(s)	752, 1298, 1429, 1522
SchI	GAGTC	3 cut(s)	231, 395, 1642
ScrFI	CCNGG	1 cut(s)	142
SfaNI	GCATC	3 cut(s)	166, 332, 1211
SfcI	CTRYAG	2 cut(s)	485, 1468
Sfr274I	CTCGAG	1 cut(s)	236
SinI	GGWCC	3 cut(s)	525, 758, 1302
SlaI	CTCGAG	1 cut(s)	236
SmiMI	CAYNNNNRTG	3 cut(s)	174, 186, 918
SmlI	CTYRAG	2 cut(s)	236, 746
SmoI	CTYRAG	2 cut(s)	236, 746
Sse9I	AATT	7 cut(s)	10, 803, 836, 1243, 1266, 1540, 1653
SseBI	AGGCCT	2 cut(s)	119, 1010
SspMI	CTAG	7 cut(s)	426, 737, 828, 876, 974, 1239, 1524
StuI	AGGCCT	2 cut(s)	119, 1010
StyD4I	CCNGG	1 cut(s)	140
StyI	CCWWGG	2 cut(s)	973, 1489
TaaI	ACNGT	5 cut(s)	556, 590, 647, 1370, 1472
TaiI	ACGT	3 cut(s)	312, 341, 1488
TaqI	TCGA	5 cut(s)	114, 237, 581, 887, 1062
TaqII	GACCGA	2 cut(s)	215, 557
TasI	AATT	7 cut(s)	10, 803, 836, 1243, 1266, 1540, 1653
TatI	WGTACW	4 cut(s)	750, 1296, 1427, 1520
TauI	GCSGC	3 cut(s)	158, 425, 1074
TfiI	GAWTC	1 cut(s)	5
Tru1I	TTAA	4 cut(s)	147, 1043, 1571, 1635
Tru9I	TTAA	4 cut(s)	147, 1043, 1571, 1635
TscAI	CASTG	4 cut(s)	352, 1375, 1477, 1534
TseFI	GTSAC	2 cut(s)	901, 1051
TseI	GCWGC	7 cut(s)	258, 487, 719, 740, 1001, 1022, 1501
Tsp45I	GTSAC	2 cut(s)	901, 1051
TspDTI	ATGAA	2 cut(s)	639, 830
TspGWI	ACGGA	2 cut(s)	425, 1198
TspRI	CASTG	4 cut(s)	352, 1375, 1477, 1534
Van91I	CCANNNNNTGG	2 cut(s)	520, 1658
VpaK11BI	GGWCC	3 cut(s)	525, 758, 1302
XapI	RAATTY	1 cut(s)	836
XbaI	TCTAGA	1 cut(s)	875
XceI	RCATGY	1 cut(s)	185
XhoI	CTCGAG	1 cut(s)	236
XmaJI	CCTAGG	1 cut(s)	973
XspI	CTAG	7 cut(s)	426, 737, 828, 876, 974, 1239, 1524
ZraI	GACGTC	2 cut(s)	310, 339
ZrmI	AGTACT	4 cut(s)	752, 1298, 1429, 1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.