Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0012479

Physical Location & Seq

Genomic Coordinates Reverse (-)

20626489 .. 20633168

Gene Structure 6680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGCTCACCCTCACTTCTCTCCTCCTGCGCCCCGCCCGCCACTTCGTCAAAGCCCTATCCACCAGAACCGCCTCCACCGCCACCACTCCTCCGCCTCCTCTCACCGTCCCCCTCTCTCACCCCATCTACCTCTTATGGTCCGCCAACACCTCCCTCGGCAAAACCCTAGTCTCCACCGGCCTCGCCGCCTCCTTTCTCCTCTCCAGTCGCCACCCCCGCCGCCGCTCTTTCCTCTATCTCAAGCCCATCCAAACCGGCTACCCGGCCGACTCCGACTCCCATTTCGTCTTCTCCAAACTCACCTCCCTCGCCCCCCGCCGCTCTCCCCACCTCTCTCTCCTCGCCTCCAATCACGTTCTCAAGGCCTCTGCCTCCGCCGCCAGCTCCATCTTAGCCCCCCAAATTCTGCCAAATCACGGCAAGGGCATGTGTGATTTGGACTGGTGTGAAGAGAGCGGGGTTGATGGTGGCAATTCTGGGAATGCTCCAAATTCAGAGCTGGTTTGTAAGACAATGTACGCTTGGGGAGACCCTGTCTCGCCGCACTTAGCGGCTGAGAGAGAAAGCGGTGCGGTGGAGGACTCGACCTTGCTCGAATTGCTGCAGAGGTGTTTGGACATTGGGGTTGGAAAGGAGAAAATGGATTCTTTCTGTGTGGTTGAGACCGCTGGTGGGGTTGCTAGTCCAGGGCCTTCTGGATCGCTTCAATGTGACTTGTACAGACCTTTCCGTTTACCTGCAATTCTTGTTGGAGATGGACGGCTAGGTGGTATTTCCGGAACCATTTCAGCTTATGAAACTTTGAAACTCAGAGGTTATGATGTTGTTGCTGTTGTTCTTGAGGATCATGGCCTTGTAAATGAGGTTCCGTTAGCATCATATTTTCGAAACAGTGTTCCAGTACTTGTGCTGCCGCCTATTCCACAAGACTTGTCAGATGACCTTGTGGAATGGTATGACGATACTCAGAATGTATTTGATTCGCTGATGGAAATAATGGTATTAGCCCACTCTGAACGAATCATGAGATTGCATAACATGCCGAAAAGGGCTGTAGATGTTTTTTGGTGGCCATTTACTCAGCACACATTTATACCAGAAGGAGATGTTACAGTGATTGATTCACGCTGTGGTGAAAACTTTTCAGTCTTCAAGTCATTCCTGGAATGGATGCCTATGATAGTATGCATCTTGTGGTTTCAGACTGAGCTTGCAAGGGATATGGGTTATGCAGCTGCAAGATTTGGGCATGTGATGTTTCCTGAGAATGTTTATGAGCCAGCCTTAGAATGTGCTGAACTTTTGCTTGAAGGTGTTGGAAAAGGTTGGGCTTCTCGAACATATTTTTCGGATAACGGATCGACAGCAATTGAGATTGCATTGAAGATGGCGTTCCGTAAATTCTCTTATGATCATGGAATTCTTTTCGATCATCTCAAGGATAACTCAGCTGAGAGACATCCAGAGCTTGTGGTCCTTGCTCTGAGAGGATCTTATCATGGCGATACTTTGGGTGCTATGGAAGCACAGGCACCATCATCTTATACAGGCTTTCTCCAACAACCATGGTATAATGGAAGAGGTTTTTTTCTTGATCCTCCCACAATCTTTTTGTACAACAATATGTGGAGCCTTTCGCTACCTAAAGGGTTGGATTCTCAGATTTTGGATCTTAAAAATTTGACCTTTTGTTCCCGTAATAATGTTTTCGACAAGAGCAGGGACAAGTCAGATATTGCTGCTCTTTATTCAACACACATATCAGAACAGTTATCAAAGTTCCCTGAATCAAAAGGGTTAATTGGATCTTTGATTATTGAACCAGTCATACAAGCTGCCGGAGGAATGCATATGGTTGATCCACTTTTCCAGAGGGTTCTTGTAAATGAGTGCCGGACTAGAAATATTCCCATTATCTTTGATGAGGTGTTCACTGGTTTCTGGCGGCTAGGAACAGAGTCCGCAGCAGAATTACTATGTTGTTTTCCAGATATAGCATGCTTCGGGAAGTTGCTGACTGGTGGGACCGTGCCCTTGGCTGCCACATTAGCTACAAATGCCGTATTTGACTCATTTATTGGAGACTCAAAGCTAAAGGCCCTTCTGCATGGACACTCGTATTCTGCACATGCCATCGGGTGCACAGCAGCTGCTAAATCCATAAGATGGTTTAAGGATTCGCAGAGAAATCCTAATATCACGTCCAAAGGAAGCTTGCTTAGCGAGTTATGGGATGAAAAGCTAGTGTACCAGATCTCTTCACATCCTGCAATTCAAAGAGTGGTTGTGTTGGGGACACTCTGTGCTGTAGAGCTTCGAGTAGAAGGCTCCAATGCTGGGTATGGGTCACTCTATGCAAGCTCTCTTCTGAAGAAGCTCCGGGAAGACGGAGTTTACATGAGGGCGCTGGGACATGTCATATATCTCATGGGCGGACCCTGCACGTCTCCTAAAGTCTGCAAGCTAGTACTCGTTAAAGTTTGCAGAAGACTCGAAGAACTTAGCCAAACTCAAAACAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004015 GO:0004141 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0006768 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008483 GO:0009058 GO:0009102 GO:0009108 GO:0009110 GO:0009987 GO:0016053 GO:0016740 GO:0016769 GO:0016874 GO:0016879 GO:0016882 GO:0017144 GO:0018130 GO:0019752 GO:0032787 GO:0034641 GO:0042364 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0051186 GO:0051188 GO:0071704 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00780 ko01100 map00780 map01100

Pfam Domains

Protein Families

AAA_26 Aminotran_3

Protein Analysis

841

Amino Acids

92.37

Weight (kDa)

6.26

Isoelectric Point (pI)

44.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_26	PF13500	173 - 282	1.3e-08	AAA domain
Aminotran_3	PF00202	412 - 514	3.6e-08	Aminotransferase class-III
Aminotran_3	PF00202	588 - 810	2e-31	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57590
fragaria_vesca	FvH4_4g09130 FvH4_4g09130
malus_domestica	MD13G1267300.v1.1
prunus_persica	Prupe.1G089300_v2.0.a1 Prupe.1G089300_v2.0.a1 Prupe.1G089300_v2.0.a1
pyrus_communis	pycom13g22810
rosa_chinensis	RchiOBHm_Chr4g0403051
rosa_laevigata	RLG00000009028
rosa_multiflora	Rmu_co8501967.1_g000001 Rmu_sc0001023.1_g000026
rosa_roxburghii	Rroxscaffold_5G00347740
rosa_rugosa	Rorug04G0040400
rosa_samantha	Rh4AG117700 Rh4BG110200 Rh4CG124500 Rh4DG109600
rosa_wichuraiana	Rw4G009420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	745
AccB1I	GGYRCC	1 cut(s)	1531
AccB7I	CCANNNNNTGG	1 cut(s)	2166
AccBSI	CCGCTC	3 cut(s)	225, 321, 456
AccIII	TCCGGA	1 cut(s)	776
AclWI	GGATC	8 cut(s)	706, 852, 1366, 1498, 1589, 1677, 1813, 1853
AcoI	YGGCCR	2 cut(s)	264, 1070
AcsI	RAATTY	5 cut(s)	402, 490, 1400, 1419, 1678
AcuI	CTGAAG	1 cut(s)	2390
AdeI	CACNNNGTG	2 cut(s)	1130, 2303
AfaI	GTAC	6 cut(s)	518, 719, 903, 1616, 2249, 2469
AfiI	CCNNNNNNNGG	4 cut(s)	416, 672, 2166, 2337
AflIII	ACRYGT	1 cut(s)	2413
AgsI	TTSAA	8 cut(s)	707, 805, 1153, 1310, 1384, 1752, 1820, 2276
AjiI	CACGTC	2 cut(s)	2202, 2445
AjnI	CCWGG	2 cut(s)	685, 1161
Alw21I	GWGCWC	1 cut(s)	2144
Alw26I	GTCTC	7 cut(s)	175, 522, 541, 656, 1450, 2076, 2451
Alw44I	GTGCAC	1 cut(s)	2140
AlwI	GGATC	8 cut(s)	706, 852, 1366, 1498, 1589, 1677, 1813, 1853
AlwNI	CAGNNNCTG	1 cut(s)	2150
Aor13HI	TCCGGA	1 cut(s)	776
AoxI	GGCC	7 cut(s)	178, 264, 363, 689, 850, 1070, 2097
ApaLI	GTGCAC	1 cut(s)	2140
ApoI	RAATTY	5 cut(s)	402, 490, 1400, 1419, 1678
ArsI	GACNNNNNNTTYG	4 cut(s)	153, 185, 266, 298
Asp700I	GAANNNNTTC	1 cut(s)	784
AspLEI	GCGC	2 cut(s)	30, 2407
AspS9I	GGNCC	6 cut(s)	138, 689, 1474, 2025, 2098, 2435
AsuC2I	CCSGG	2 cut(s)	263, 2381
AsuHPI	GGTGA	4 cut(s)	94, 110, 292, 1145
AsuII	TTCGAA	1 cut(s)	886
AvaII	GGWCC	4 cut(s)	138, 1474, 2025, 2435
BaeGI	GKGCMC	2 cut(s)	2034, 2144
BalI	TGGCCA	1 cut(s)	1072
BanI	GGYRCC	1 cut(s)	1531
BbsI	GAAGAC	4 cut(s)	280, 1141, 2391, 2494
Bbv12I	GWGCWC	1 cut(s)	2144
BceAI	ACGGC	3 cut(s)	433, 776, 2045
BcgI	CGANNNNNNTGC	2 cut(s)	2473, 2507
BciT130I	CCWGG	2 cut(s)	687, 1163
BclI	TGATCA	1 cut(s)	1411
BcnI	CCSGG	2 cut(s)	263, 2381
BcoDI	GTCTC	7 cut(s)	175, 522, 541, 656, 1450, 2076, 2451
BfaI	CTAG	7 cut(s)	167, 681, 764, 1899, 1949, 2243, 2465
BfmI	CTRYAG	3 cut(s)	602, 1053, 2307
BfoI	RGCGCY	1 cut(s)	2408
BfuAI	ACCTGC	1 cut(s)	745
BglII	AGATCT	1 cut(s)	2253
BlpI	GCTNAGC	1 cut(s)	2219
BmcAI	AGTACT	2 cut(s)	903, 2469
Bme1390I	CCNGG	4 cut(s)	263, 687, 1163, 2381
Bme18I	GGWCC	4 cut(s)	138, 1474, 2025, 2435
BmgBI	CACGTC	2 cut(s)	2202, 2445
BmgT120I	GGNCC	6 cut(s)	138, 689, 1474, 2025, 2098, 2435
BmiI	GGNNCC	7 cut(s)	781, 867, 1533, 1631, 2026, 2329, 2437
BmrFI	CCNGG	4 cut(s)	263, 687, 1163, 2381
BmsI	GCATC	3 cut(s)	884, 1161, 1197
BpiI	GAAGAC	4 cut(s)	280, 1141, 2391, 2494
BpmI	CTGGAG	1 cut(s)	187
Bpu1102I	GCTNAGC	1 cut(s)	2219
Bpu14I	TTCGAA	1 cut(s)	886
BpuEI	CTTGAG	4 cut(s)	224, 344, 860, 1421
BpuMI	CCSGG	2 cut(s)	263, 2381
BsaI	GGTCTC	2 cut(s)	522, 656
BsaJI	CCNNGG	4 cut(s)	154, 686, 1565, 2034
BsaWI	WCCGGW	1 cut(s)	776
BsaXI	ACNNNNNCTCC	6 cut(s)	73, 103, 260, 290, 519, 549
Bsc4I	CCNNNNNNNGG	4 cut(s)	416, 672, 2166, 2337
Bse118I	RCCGGY	2 cut(s)	176, 254
Bse1I	ACTGG	6 cut(s)	204, 446, 899, 1823, 1939, 2023
BseAI	TCCGGA	1 cut(s)	776
BseBI	CCWGG	2 cut(s)	687, 1163
BseDI	CCNNGG	4 cut(s)	154, 686, 1565, 2034
BseGI	GGATG	5 cut(s)	246, 1176, 1459, 2239, 2263
BseLI	CCNNNNNNNGG	4 cut(s)	416, 672, 2166, 2337
BseNI	ACTGG	6 cut(s)	204, 446, 899, 1823, 1939, 2023
BseRI	GAGGAG	5 cut(s)	11, 78, 87, 188, 329
BseSI	GKGCMC	2 cut(s)	2034, 2144
BseX3I	CGGCCG	1 cut(s)	264
BseYI	CCCAGC	2 cut(s)	2336, 2407
BsgI	GTGCAG	2 cut(s)	2109, 2425
Bsh1285I	CGRYCG	1 cut(s)	267
BshFI	GGCC	7 cut(s)	180, 266, 365, 691, 852, 1072, 2099
BshNI	GGYRCC	1 cut(s)	1531
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	1 cut(s)	2144
BsiSI	CCGG	7 cut(s)	177, 255, 263, 777, 1839, 1894, 2380
BslFI	GGGAC	5 cut(s)	92, 1736, 2038, 2308, 2424
BslI	CCNNNNNNNGG	4 cut(s)	416, 672, 2166, 2337
BsmAI	GTCTC	7 cut(s)	175, 522, 541, 656, 1450, 2076, 2451
BsmBI	CGTCTC	1 cut(s)	2451
BsmFI	GGGAC	5 cut(s)	92, 1736, 2038, 2308, 2424
BsmI	GAATGC	2 cut(s)	487, 1851
BsnI	GGCC	7 cut(s)	180, 266, 365, 691, 852, 1072, 2099
Bso31I	GGTCTC	2 cut(s)	522, 656
Bsp119I	TTCGAA	1 cut(s)	886
Bsp1286I	GDGCHC	2 cut(s)	2034, 2144
Bsp13I	TCCGGA	1 cut(s)	776
Bsp1407I	TGTACA	2 cut(s)	717, 1614
Bsp1720I	GCTNAGC	1 cut(s)	2219
Bsp19I	CCATGG	1 cut(s)	1565
BspANI	GGCC	7 cut(s)	180, 266, 365, 691, 852, 1072, 2099
BspEI	TCCGGA	1 cut(s)	776
BspHI	TCATGA	1 cut(s)	1023
BspLI	GGNNCC	7 cut(s)	781, 867, 1533, 1631, 2026, 2329, 2437
BspMAI	CTGCAG	1 cut(s)	606
BspMI	ACCTGC	1 cut(s)	745
BspPI	GGATC	8 cut(s)	706, 852, 1366, 1498, 1589, 1677, 1813, 1853
BspT104I	TTCGAA	1 cut(s)	886
BspT107I	GGYRCC	1 cut(s)	1531
BspTNI	GGTCTC	2 cut(s)	522, 656
BsrBI	CCGCTC	3 cut(s)	225, 321, 456
BsrFI	RCCGGY	2 cut(s)	176, 254
BsrGI	TGTACA	2 cut(s)	717, 1614
BsrI	ACTGG	6 cut(s)	204, 446, 899, 1823, 1939, 2023
BssAI	RCCGGY	2 cut(s)	176, 254
BssECI	CCNNGG	4 cut(s)	154, 686, 1565, 2034
BssT1I	CCWWGG	2 cut(s)	1565, 2034
Bst2UI	CCWGG	2 cut(s)	687, 1163
Bst4CI	ACNGT	5 cut(s)	106, 893, 1114, 1770, 2029
Bst6I	CTCTTC	4 cut(s)	444, 1573, 2263, 2370
BstAPI	GCANNNNNTGC	1 cut(s)	1039
BstAUI	TGTACA	2 cut(s)	717, 1614
BstBI	TTCGAA	1 cut(s)	886
BstC8I	GCNNGC	8 cut(s)	37, 382, 1212, 1281, 1999, 2216, 2359, 2462
BstDSI	CCRYGG	1 cut(s)	1565
BstF5I	GGATG	5 cut(s)	246, 1176, 1459, 2239, 2263
BstH2I	RGCGCY	1 cut(s)	2408
BstHHI	GCGC	2 cut(s)	30, 2407
BstMAI	GTCTC	7 cut(s)	175, 522, 541, 656, 1450, 2076, 2451
BstMCI	CGRYCG	1 cut(s)	267
BstNI	CCWGG	2 cut(s)	687, 1163
BstNSI	RCATGY	6 cut(s)	430, 1042, 1253, 2001, 2132, 2417
BstSCI	CCNGG	4 cut(s)	261, 685, 1161, 2379
BstSFI	CTRYAG	3 cut(s)	602, 1053, 2307
BstSLI	GKGCMC	2 cut(s)	2034, 2144
BstV2I	GAAGAC	4 cut(s)	280, 1141, 2391, 2494
BstX2I	RGATCY	4 cut(s)	1490, 1669, 1805, 2253
BstYI	RGATCY	4 cut(s)	1490, 1669, 1805, 2253
BstZI	CGGCCG	1 cut(s)	264
BsuRI	GGCC	7 cut(s)	180, 266, 365, 691, 852, 1072, 2099
BtgI	CCRYGG	1 cut(s)	1565
BtrI	CACGTC	2 cut(s)	2202, 2445
BtsCI	GGATG	5 cut(s)	246, 1176, 1459, 2239, 2263
BtsIMutI	CAGTG	3 cut(s)	898, 1119, 1932
BveI	ACCTGC	1 cut(s)	745
Cac8I	GCNNGC	8 cut(s)	37, 382, 1212, 1281, 1999, 2216, 2359, 2462
CaiI	CAGNNNCTG	1 cut(s)	2150
CciI	TCATGA	1 cut(s)	1023
CfoI	GCGC	2 cut(s)	30, 2407
Cfr10I	RCCGGY	2 cut(s)	176, 254
Cfr13I	GGNCC	6 cut(s)	138, 689, 1474, 2025, 2098, 2435
Csp6I	GTAC	6 cut(s)	517, 718, 902, 1615, 2248, 2468
CspCI	CAANNNNNGTGG	2 cut(s)	912, 947
CviQI	GTAC	6 cut(s)	517, 718, 902, 1615, 2248, 2468
DraIII	CACNNNGTG	2 cut(s)	1130, 2303
EaeI	YGGCCR	2 cut(s)	264, 1070
EagI	CGGCCG	1 cut(s)	264
Eam1104I	CTCTTC	4 cut(s)	444, 1573, 2263, 2370
EarI	CTCTTC	4 cut(s)	444, 1573, 2263, 2370
EciI	GGCGGA	4 cut(s)	81, 130, 364, 2448
EclXI	CGGCCG	1 cut(s)	264
Eco130I	CCWWGG	2 cut(s)	1565, 2034
Eco147I	AGGCCT	1 cut(s)	365
Eco31I	GGTCTC	2 cut(s)	522, 656
Eco47I	GGWCC	4 cut(s)	138, 1474, 2025, 2435
Eco52I	CGGCCG	1 cut(s)	264
Eco57I	CTGAAG	1 cut(s)	2390
EcoO109I	RGGNCCY	2 cut(s)	689, 2098
EcoRI	GAATTC	1 cut(s)	1419
EcoRII	CCWGG	2 cut(s)	685, 1161
EcoT14I	CCWWGG	2 cut(s)	1565, 2034
EcoT22I	ATGCAT	2 cut(s)	1190, 1851
ErhI	CCWWGG	2 cut(s)	1565, 2034
Esp3I	CGTCTC	1 cut(s)	2451
FaqI	GGGAC	5 cut(s)	92, 1736, 2038, 2308, 2424
FauI	CCCGC	5 cut(s)	40, 44, 224, 323, 449
FauNDI	CATATG	1 cut(s)	1851
FbaI	TGATCA	1 cut(s)	1411
FokI	GGATG	5 cut(s)	233, 1183, 1446, 2246, 2250
FspBI	CTAG	7 cut(s)	167, 681, 764, 1899, 1949, 2243, 2465
GlaI	GCGC	2 cut(s)	29, 2406
GsaI	CCCAGC	2 cut(s)	2340, 2411
GsuI	CTGGAG	1 cut(s)	187
HaeII	RGCGCY	1 cut(s)	2408
HaeIII	GGCC	7 cut(s)	180, 266, 365, 691, 852, 1072, 2099
HapII	CCGG	7 cut(s)	177, 255, 263, 777, 1839, 1894, 2380
HhaI	GCGC	2 cut(s)	30, 2407
Hin6I	GCGC	2 cut(s)	28, 2405
HinP1I	GCGC	2 cut(s)	28, 2405
HindIII	AAGCTT	1 cut(s)	2212
HpaII	CCGG	7 cut(s)	177, 255, 263, 777, 1839, 1894, 2380
HphI	GGTGA	4 cut(s)	94, 110, 292, 1145
Hpy166II	GTNNAC	5 cut(s)	734, 1932, 2142, 2248, 2395
Hpy8I	GTNNAC	5 cut(s)	734, 1932, 2142, 2248, 2395
HpyAV	CCTTC	5 cut(s)	702, 1094, 1304, 2111, 2318
HpyCH4III	ACNGT	5 cut(s)	106, 893, 1114, 1770, 2029
HpyCH4IV	ACGT	3 cut(s)	354, 2201, 2444
HpySE526I	ACGT	3 cut(s)	354, 2201, 2444
HspAI	GCGC	2 cut(s)	28, 2405
Kpn2I	TCCGGA	1 cut(s)	776
Ksp22I	TGATCA	1 cut(s)	1411
LmnI	GCTCC	5 cut(s)	389, 490, 1629, 2333, 2382
LweI	GCATC	3 cut(s)	884, 1161, 1197
MaeI	CTAG	7 cut(s)	167, 681, 764, 1899, 1949, 2243, 2465
MaeII	ACGT	3 cut(s)	354, 2201, 2444
MaeIII	GTNAC	3 cut(s)	710, 1108, 2346
MbiI	CCGCTC	3 cut(s)	225, 321, 456
MfeI	CAATTG	1 cut(s)	1368
MflI	RGATCY	4 cut(s)	1490, 1669, 1805, 2253
MhlI	GDGCHC	2 cut(s)	2034, 2144
MlsI	TGGCCA	1 cut(s)	1072
MluNI	TGGCCA	1 cut(s)	1072
MlyI	GAGTC	7 cut(s)	263, 269, 575, 1967, 2063, 2078, 2484
MmeI	TCCRAC	6 cut(s)	297, 607, 730, 1297, 1582, 1632
Mox20I	TGGCCA	1 cut(s)	1072
Mph1103I	ATGCAT	2 cut(s)	1190, 1851
MroI	TCCGGA	1 cut(s)	776
MroXI	GAANNNNTTC	1 cut(s)	784
MscI	TGGCCA	1 cut(s)	1072
MseI	TTAA	5 cut(s)	1674, 1799, 2172, 2475, 2521
Msp20I	TGGCCA	1 cut(s)	1072
MspA1I	CMGCKG	4 cut(s)	668, 1235, 1451, 2150
MspI	CCGG	7 cut(s)	177, 255, 263, 777, 1839, 1894, 2380
MspR9I	CCNGG	4 cut(s)	263, 687, 1163, 2381
MunI	CAATTG	1 cut(s)	1368
Mva1269I	GAATGC	2 cut(s)	487, 1851
MvaI	CCWGG	2 cut(s)	687, 1163
NciI	CCSGG	2 cut(s)	263, 2381
NcoI	CCATGG	1 cut(s)	1565
NdeI	CATATG	1 cut(s)	1851
NlaIV	GGNNCC	7 cut(s)	781, 867, 1533, 1631, 2026, 2329, 2437
NmeAIII	GCCGAG	1 cut(s)	135
NmuCI	GTSAC	2 cut(s)	710, 2346
NsiI	ATGCAT	2 cut(s)	1190, 1851
NspI	RCATGY	6 cut(s)	430, 1042, 1253, 2001, 2132, 2417
NspV	TTCGAA	1 cut(s)	886
PaeI	GCATGC	1 cut(s)	2001
PagI	TCATGA	1 cut(s)	1023
PceI	AGGCCT	1 cut(s)	365
PciI	ACATGT	1 cut(s)	2413
PctI	GAATGC	2 cut(s)	487, 1851
PdmI	GAANNNNTTC	1 cut(s)	784
PfeI	GAWTC	7 cut(s)	644, 980, 1020, 1121, 1655, 1787, 2177
PflFI	GACNNNGTC	1 cut(s)	533
PflMI	CCANNNNNTGG	1 cut(s)	2166
PfoI	TCCNGGA	2 cut(s)	1161, 2379
PleI	GAGTC	7 cut(s)	263, 269, 575, 1966, 2063, 2078, 2484
PpsI	GAGTC	7 cut(s)	263, 269, 575, 1966, 2063, 2078, 2484
PscI	ACATGT	1 cut(s)	2413
Psp6I	CCWGG	2 cut(s)	685, 1161
PspFI	CCCAGC	2 cut(s)	2336, 2407
PspGI	CCWGG	2 cut(s)	685, 1161
PspN4I	GGNNCC	7 cut(s)	781, 867, 1533, 1631, 2026, 2329, 2437
PspPI	GGNCC	6 cut(s)	138, 689, 1474, 2025, 2098, 2435
PsrI	GAACNNNNNNTAC	4 cut(s)	849, 881, 1812, 1844
PstI	CTGCAG	1 cut(s)	606
PstNI	CAGNNNCTG	1 cut(s)	2150
PsuI	RGATCY	4 cut(s)	1490, 1669, 1805, 2253
PsyI	GACNNNGTC	1 cut(s)	533
PvuII	CAGCTG	3 cut(s)	1235, 1451, 2150
RsaI	GTAC	6 cut(s)	518, 719, 903, 1616, 2249, 2469
RsaNI	GTAC	6 cut(s)	517, 718, 902, 1615, 2248, 2468
SaqAI	TTAA	5 cut(s)	1674, 1799, 2172, 2475, 2521
Sau96I	GGNCC	6 cut(s)	138, 689, 1474, 2025, 2098, 2435
ScaI	AGTACT	2 cut(s)	903, 2469
SchI	GAGTC	7 cut(s)	263, 269, 575, 1967, 2063, 2078, 2484
ScrFI	CCNGG	4 cut(s)	263, 687, 1163, 2381
SduI	GDGCHC	2 cut(s)	2034, 2144
SfaNI	GCATC	3 cut(s)	884, 1161, 1197
SfcI	CTRYAG	3 cut(s)	602, 1053, 2307
SfuI	TTCGAA	1 cut(s)	886
SinI	GGWCC	4 cut(s)	138, 1474, 2025, 2435
SmlI	CTYRAG	4 cut(s)	239, 359, 839, 1436
SmoI	CTYRAG	4 cut(s)	239, 359, 839, 1436
SphI	GCATGC	1 cut(s)	2001
SseBI	AGGCCT	1 cut(s)	365
SspI	AATATT	1 cut(s)	1906
SspMI	CTAG	7 cut(s)	167, 681, 764, 1899, 1949, 2243, 2465
StuI	AGGCCT	1 cut(s)	365
StyD4I	CCNGG	4 cut(s)	261, 685, 1161, 2379
StyI	CCWWGG	2 cut(s)	1565, 2034
TaaI	ACNGT	5 cut(s)	106, 893, 1114, 1770, 2029
TaiI	ACGT	3 cut(s)	357, 2204, 2447
TaqI	TCGA	9 cut(s)	584, 594, 886, 1336, 1361, 1428, 1710, 2317, 2493
TatI	WGTACW	4 cut(s)	717, 901, 1614, 2467
TauI	GCSGC	9 cut(s)	188, 222, 225, 321, 380, 544, 554, 916, 1948
TfiI	GAWTC	7 cut(s)	644, 980, 1020, 1121, 1655, 1787, 2177
Tru1I	TTAA	5 cut(s)	1674, 1799, 2172, 2475, 2521
Tru9I	TTAA	5 cut(s)	1674, 1799, 2172, 2475, 2521
TscAI	CASTG	3 cut(s)	898, 1119, 1939
TseFI	GTSAC	2 cut(s)	710, 2346
Tsp45I	GTSAC	2 cut(s)	710, 2346
TspDTI	ATGAA	2 cut(s)	810, 2250
TspGWI	ACGGA	5 cut(s)	719, 858, 1371, 1385, 2403
TspRI	CASTG	3 cut(s)	898, 1119, 1939
Tth111I	GACNNNGTC	1 cut(s)	533
Van91I	CCANNNNNTGG	1 cut(s)	2166
VneI	GTGCAC	1 cut(s)	2140
VpaK11BI	GGWCC	4 cut(s)	138, 1474, 2025, 2435
XapI	RAATTY	5 cut(s)	402, 490, 1400, 1419, 1678
XceI	RCATGY	6 cut(s)	430, 1042, 1253, 2001, 2132, 2417
XmnI	GAANNNNTTC	1 cut(s)	784
XspI	CTAG	7 cut(s)	167, 681, 764, 1899, 1949, 2243, 2465
ZrmI	AGTACT	2 cut(s)	903, 2469
Zsp2I	ATGCAT	2 cut(s)	1190, 1851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.