Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0012479

Physical Location & Seq

Genomic Coordinates Reverse (-)

19307178 .. 19314451

Gene Structure 7274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00347740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGCTCCGCCTCTCCTCTCTCCTTCTCCGCCACAACCGCCACCGCTGCCACCTCACCAAACCCTTCACCACCACCACTAGTCCTCTTCCTCTCACCGTCCCTCTCTCTCACCCCATCTACCTCATATGGTCCTCCAACACCTCCCTCGGCAAAACCCTAGTCTCCACCGGCCTCGCCGCCTCCTCTCTCCGCTCCCACCGCCGCCGCTCCTTCCTCTACCTCAAGCCCGTCCAGACCGGCTTCCCCGCGGACTCCGACTCCCGCTTCGTCTTCTCCAAACTCACCTCCCTCGCCCTCCGCCACCGCCGCCTCTCCCCTCATTTCTCTCTCCTCGCCTCCAATCACCTCCTCAAGGCCTCCGCCTCTGCCGCAGCGTCCCTATTAGCCCCCGGAGCTCCCCGAATTTACGATAATGGCATGTGCGATTTGGATTGGTCTGAGGAGAGGAGGGTTGCTGGGGAAAATTCCGGGAATGATGAGCCTTCAAAGCTTGTTTGTAAGACAATGTATGCTTGGGGCGACGCCGTTTCGCCACATTTGGCTGCCGAGAGGGAAAATGGGACTATTGAGGATTCGGCTTTGCTCGAAACGGTGCAGAGGTGTTTGGAAATTGGGGTTGGAAAAGAGAATATGGATCATTTTTGTGTGGTTGAGACGGCTGGCGGGGTTGCCAGTCCAGGGCCTTCTGGTTCACTTCAATGTGACCTGTACAGGCCTTTTCGTTTGCCTGCAATTCTTGTTGGAGATGGGCGGTTAGGTGGGATTTCCGGAACCATTTCAGCTTATGAAACTTTGAAACTCCGGGGTTATGATGTTGTCGCGGTTGTTCTGGAGGATCATGGCCTTGTAAATGAGGTGCCTTTAGCATCATATCTTAGAAACAGTGTTCCAGTGCTTGTTCTGCCACCTGTTCCACAAGACTTGTCAGATGACCTTATGGAATGGTACGATGATGCTCATAATGTTTTTGATTCGCTCATGGAGATAATGCTATCAGCTTACTCTGAGAGAGTCAGGAGATTGCGTGACATGCCAAAGAGGGCAAATGATGATGCCATAACTGAACAGTTTGACGCATGTGCAAGTTGGTGGACTCAAGGACCTGATGCTACTTTACAGACTGAGCTTGCCAGGGATATCGGTTATGCAGCTGCAAGATTTGGGCATGTAATGTTTCCTGAGAATGTTTATGAGCCAGCCTTAGAATGTGCAGAACTTTTGCTTGAAGGTGTTGGAAAAGACTGGGCTTCTCGAACGTACTTTTCGGACAATGGATCTACAGCAATTGAGATTGCACTGAAGATGGCATTCCGTAAATTCTCTCATGATCACGGACTTCTTTTGGAATCTCTAAAGGACAACTCAACTGAGAGATGTCCAGAGCTTGTGGTCCTAGCTCTTAATGGATCTTATCATGGTGATACTTTGGGTGCTATGGAAGTGCAAGCACCGTCATGTTATACTGGCTTCCTACAACAACCATGGTATAAAGGAAGAGGTTTTTTTCTTGATCCTCCTACAGTCTTTTTGAGCAAGAATATGTGGAACCTTTCCCTACCTGAAGGATTGCATTCTCCAGATTTAAATGTTAAGAATATGACCTTTTGTTCCCTTGATGATATACTAAACAAGAGCAGGGACAAGTCAGATCTTGCTGTAATTTATTCTGCATTCATATCACATCAGTTATCAAAGTTTCCTGAATCAAAAGGGCTAATCGGAGCATTGATTATTGAACCAGGCAAGATTGTTTATATCATTATACATGGTGCTGGAGGAATGCATATGGTTGATCCACTTTTCCAACGGGTTCTTGTGAATGAATGCCGGAATAAAAACATTCCCGTTATCTTTGATGAGGTCTTCACTGGTTTCTGGCGCCTGGGAACAGAGTCTGCTGCAGAACTTCTATGCTGTTTTCCAGATATAGCCTGTTTCGCGAAGCTGATGACAGGTGGGACTATACCCTTGTCTGCTACATTGGCTACGAATGCTGTATTTGACTCATTTATTGGAGACTCAAAGCTGGAGGCCCTTTTGCATGGACACTCATATACTGCACATGCCATCGGGTGCACAGCTGCTGCTAAATCCATCAGATGGTTTAAAGATTCTGATAGAAATCCTAATATCAGTTCCAAAGGAAGCTTGCTCAGAGAGCTATGGGATAACAAACTAGTGTACCAAATCTCTTCACATCCTGGAATTAAAAGAGTGGTTGTGTTGGGAACGCTTTGCGCTATAGAACTCCAAGCACAAGGCTGCAATGCTGGGTATGGGTCACTGTATGCAAGCTCTCTTGTGAAGCAGCTCCGAGAAGACGGTGTTTACATGAGGCCTTTGGGAAATGTCATATATCTCATGTGCGGACCCTGCACATCTCCTAAGATCTGCAACCAGGCACTCAGAAAAGTTTACAGAAGACTTGAAGAATTTAGCCAATCTCAACATAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004015 GO:0004141 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0006768 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008483 GO:0009058 GO:0009102 GO:0009108 GO:0009110 GO:0009987 GO:0016053 GO:0016740 GO:0016769 GO:0016874 GO:0016879 GO:0016882 GO:0017144 GO:0018130 GO:0019752 GO:0032787 GO:0034641 GO:0042364 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0051186 GO:0051188 GO:0071704 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00780 ko01100 map00780 map01100

Pfam Domains

Protein Families

AAA_26 Aminotran_3

Protein Analysis

818

Amino Acids

90.23

Weight (kDa)

6.35

Isoelectric Point (pI)

49.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_26	PF13500	170 - 278	5.6e-09	AAA domain
Aminotran_3	PF00202	383 - 484	5.5e-09	Aminotransferase class-III
Aminotran_3	PF00202	568 - 802	2.4e-30	Aminotransferase class-III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57590
fragaria_vesca	FvH4_4g09130 FvH4_4g09130
malus_domestica	MD13G1267300.v1.1
prunus_persica	Prupe.1G089300_v2.0.a1 Prupe.1G089300_v2.0.a1 Prupe.1G089300_v2.0.a1
pyrus_communis	pycom13g22810
rosa_chinensis	RchiOBHm_Chr4g0403051
rosa_laevigata	RLG00000009028
rosa_multiflora	Rmu_co8501967.1_g000001 Rmu_sc0001023.1_g000026
rosa_roxburghii	Rroxscaffold_5G00347740
rosa_rugosa	Rorug04G0040400
rosa_samantha	Rh4AG117700 Rh4BG110200 Rh4CG124500 Rh4DG109600
rosa_wichuraiana	Rw4G009420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	856, 1878
AccB7I	CCANNNNNTGG	1 cut(s)	2100
AccBSI	CCGCTC	2 cut(s)	192, 207
AccII	CGCG	3 cut(s)	248, 821, 1940
AccIII	TCCGGA	1 cut(s)	767
AclWI	GGATC	6 cut(s)	642, 843, 1282, 1414, 1505, 1787
AcsI	RAATTY	4 cut(s)	402, 463, 1316, 2432
AcuI	CTGAAG	2 cut(s)	1319, 1581
AcyI	GRCGYC	2 cut(s)	522, 1879
AfaI	GTAC	4 cut(s)	710, 947, 1259, 2183
AfiI	CCNNNNNNNGG	3 cut(s)	352, 678, 2100
AgsI	TTSAA	6 cut(s)	486, 698, 796, 1226, 1736, 2429
AhlI	ACTAGT	2 cut(s)	77, 2176
AjnI	CCWGG	6 cut(s)	676, 1130, 1738, 1881, 2200, 2397
AjuI	GAANNNNNNNTTGG	2 cut(s)	600, 632
Alw21I	GWGCWC	2 cut(s)	397, 2078
Alw26I	GTCTC	3 cut(s)	166, 647, 2010
Alw44I	GTGCAC	1 cut(s)	2074
AlwI	GGATC	6 cut(s)	642, 843, 1282, 1414, 1505, 1787
AlwNI	CAGNNNCTG	2 cut(s)	1895, 2084
Aor13HI	TCCGGA	1 cut(s)	767
AoxI	GGCC	7 cut(s)	169, 354, 680, 713, 841, 2031, 2336
ApaLI	GTGCAC	1 cut(s)	2074
ApoI	RAATTY	4 cut(s)	402, 463, 1316, 2432
ArsI	GACNNNNNNTTYG	4 cut(s)	144, 176, 248, 280
Asp700I	GAANNNNTTC	1 cut(s)	775
AspLEI	GCGC	2 cut(s)	1881, 2240
AspS9I	GGNCC	6 cut(s)	129, 680, 1100, 1390, 2032, 2369
AsuC2I	CCSGG	3 cut(s)	390, 469, 803
AsuHPI	GGTGA	7 cut(s)	46, 58, 85, 101, 274, 335, 1430
AvaII	GGWCC	4 cut(s)	129, 1100, 1390, 2369
BaeGI	GKGCMC	1 cut(s)	2078
BaeI	ACNNNNGTAYC	2 cut(s)	2165, 2198
BanI	GGYRCC	2 cut(s)	856, 1878
BanII	GRGCYC	1 cut(s)	397
BbsI	GAAGAC	4 cut(s)	262, 1855, 2325, 2428
Bbv12I	GWGCWC	2 cut(s)	397, 2078
BccI	CCATC	6 cut(s)	122, 740, 1297, 2075, 2094, 2102
BceAI	ACGGC	2 cut(s)	509, 672
BciT130I	CCWGG	6 cut(s)	678, 1132, 1740, 1883, 2202, 2399
BclI	TGATCA	1 cut(s)	1327
BcnI	CCSGG	3 cut(s)	390, 469, 803
BcoDI	GTCTC	3 cut(s)	166, 647, 2010
BcuI	ACTAGT	2 cut(s)	77, 2176
BfaI	CTAG	4 cut(s)	78, 158, 1394, 2177
BfmI	CTRYAG	4 cut(s)	1278, 1518, 1899, 2241
BfoI	RGCGCY	1 cut(s)	1882
BglII	AGATCT	2 cut(s)	1648, 2388
Bme1390I	CCNGG	9 cut(s)	390, 469, 678, 803, 1132, 1740, 1883, 2202, 2399
Bme18I	GGWCC	4 cut(s)	129, 1100, 1390, 2369
BmgT120I	GGNCC	6 cut(s)	129, 680, 1100, 1390, 2032, 2369
BmiI	GGNNCC	5 cut(s)	772, 858, 1547, 1880, 2371
BmrFI	CCNGG	9 cut(s)	390, 469, 678, 803, 1132, 1740, 1883, 2202, 2399
BmrI	ACTGGG	1 cut(s)	1252
BmsI	GCATC	4 cut(s)	875, 943, 1042, 1096
BmuI	ACTGGG	1 cut(s)	1252
BpiI	GAAGAC	4 cut(s)	262, 1855, 2325, 2428
BpmI	CTGGAG	4 cut(s)	851, 1560, 1794, 2048
BpuEI	CTTGAG	3 cut(s)	206, 335, 1080
BpuMI	CCSGG	3 cut(s)	390, 469, 803
BsaBI	GATNNNNATC	1 cut(s)	2121
BsaHI	GRCGYC	2 cut(s)	522, 1879
BsaJI	CCNNGG	8 cut(s)	145, 246, 388, 677, 802, 1131, 1481, 1882
BsaWI	WCCGGW	1 cut(s)	767
BsaXI	ACNNNNNCTCC	4 cut(s)	242, 272, 1009, 1039
Bsc4I	CCNNNNNNNGG	3 cut(s)	352, 678, 2100
Bse118I	RCCGGY	2 cut(s)	167, 236
Bse1I	ACTGG	5 cut(s)	672, 890, 1247, 1468, 1873
Bse3DI	GCAATG	1 cut(s)	2272
Bse8I	GATNNNNATC	1 cut(s)	2121
BseAI	TCCGGA	1 cut(s)	767
BseBI	CCWGG	6 cut(s)	678, 1132, 1740, 1883, 2202, 2399
BseDI	CCNNGG	8 cut(s)	145, 246, 388, 677, 802, 1131, 1481, 1882
BseGI	GGATG	1 cut(s)	2197
BseJI	GATNNNNATC	1 cut(s)	2121
BseLI	CCNNNNNNNGG	3 cut(s)	352, 678, 2100
BseMI	GCAATG	1 cut(s)	2272
BseMII	CTCAG	7 cut(s)	429, 996, 1113, 1170, 1359, 2167, 2419
BseNI	ACTGG	5 cut(s)	672, 890, 1247, 1468, 1873
BseRI	GAGGAG	6 cut(s)	4, 172, 320, 338, 455, 460
BseSI	GKGCMC	1 cut(s)	2078
BseYI	CCCAGC	2 cut(s)	455, 2270
BsgI	GTGCAG	4 cut(s)	614, 1230, 2043, 2359
Bsh1236I	CGCG	3 cut(s)	248, 821, 1940
BshFI	GGCC	7 cut(s)	171, 356, 682, 715, 843, 2033, 2338
BshNI	GGYRCC	2 cut(s)	856, 1878
BsiHKAI	GWGCWC	2 cut(s)	397, 2078
BsiSI	CCGG	7 cut(s)	168, 237, 390, 468, 768, 802, 1828
BslFI	GGGAC	5 cut(s)	83, 361, 574, 1652, 1972
BslI	CCNNNNNNNGG	3 cut(s)	352, 678, 2100
BsmAI	GTCTC	3 cut(s)	166, 647, 2010
BsmBI	CGTCTC	1 cut(s)	647
BsmFI	GGGAC	5 cut(s)	83, 361, 574, 1652, 1972
BsmI	GAATGC	6 cut(s)	1307, 1570, 1670, 1785, 1829, 1996
BsnI	GGCC	7 cut(s)	171, 356, 682, 715, 843, 2033, 2338
Bsp1286I	GDGCHC	2 cut(s)	397, 2078
Bsp13I	TCCGGA	1 cut(s)	767
Bsp1407I	TGTACA	1 cut(s)	708
Bsp143I	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
Bsp19I	CCATGG	1 cut(s)	1481
Bsp68I	TCGCGA	1 cut(s)	1940
BspANI	GGCC	7 cut(s)	171, 356, 682, 715, 843, 2033, 2338
BspCNI	CTCAG	7 cut(s)	430, 997, 1114, 1171, 1360, 2166, 2418
BspEI	TCCGGA	1 cut(s)	767
BspFNI	CGCG	3 cut(s)	248, 821, 1940
BspHI	TCATGA	1 cut(s)	1324
BspLI	GGNNCC	5 cut(s)	772, 858, 1547, 1880, 2371
BspMAI	CTGCAG	1 cut(s)	1903
BspPI	GGATC	6 cut(s)	642, 843, 1282, 1414, 1505, 1787
BspT107I	GGYRCC	2 cut(s)	856, 1878
BsrBI	CCGCTC	2 cut(s)	192, 207
BsrDI	GCAATG	1 cut(s)	2272
BsrFI	RCCGGY	2 cut(s)	167, 236
BsrGI	TGTACA	1 cut(s)	708
BsrI	ACTGG	5 cut(s)	672, 890, 1247, 1468, 1873
BssAI	RCCGGY	2 cut(s)	167, 236
BssECI	CCNNGG	8 cut(s)	145, 246, 388, 677, 802, 1131, 1481, 1882
BssMI	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
BssNI	GRCGYC	2 cut(s)	522, 1879
BssT1I	CCWWGG	1 cut(s)	1481
Bst2UI	CCWGG	6 cut(s)	678, 1132, 1740, 1883, 2202, 2399
Bst4CI	ACNGT	8 cut(s)	97, 592, 884, 1068, 1452, 1522, 2286, 2324
Bst6I	CTCTTC	3 cut(s)	90, 1489, 2197
BstACI	GRCGYC	2 cut(s)	522, 1879
BstAUI	TGTACA	1 cut(s)	708
BstC8I	GCNNGC	7 cut(s)	661, 729, 1128, 1197, 1446, 2150, 2293
BstDSI	CCRYGG	2 cut(s)	246, 1481
BstENI	CCTNNNNNAGG	1 cut(s)	350
BstF5I	GGATG	1 cut(s)	2197
BstFNI	CGCG	3 cut(s)	248, 821, 1940
BstH2I	RGCGCY	1 cut(s)	1882
BstHHI	GCGC	2 cut(s)	1881, 2240
BstKTI	GATC	9 cut(s)	637, 838, 1277, 1330, 1409, 1513, 1651, 1795, 2391
BstMAI	GTCTC	3 cut(s)	166, 647, 2010
BstMBI	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
BstNI	CCWGG	6 cut(s)	678, 1132, 1740, 1883, 2202, 2399
BstNSI	RCATGY	5 cut(s)	421, 1033, 1080, 1169, 2066
BstSCI	CCNGG	9 cut(s)	388, 467, 676, 801, 1130, 1738, 1881, 2200, 2397
BstSFI	CTRYAG	4 cut(s)	1278, 1518, 1899, 2241
BstSLI	GKGCMC	1 cut(s)	2078
BstUI	CGCG	3 cut(s)	248, 821, 1940
BstV2I	GAAGAC	4 cut(s)	262, 1855, 2325, 2428
BstX2I	RGATCY	4 cut(s)	1274, 1406, 1648, 2388
BstYI	RGATCY	4 cut(s)	1274, 1406, 1648, 2388
BsuRI	GGCC	7 cut(s)	171, 356, 682, 715, 843, 2033, 2338
BtgI	CCRYGG	2 cut(s)	246, 1481
BtsCI	GGATG	1 cut(s)	2197
BtsIMutI	CAGTG	5 cut(s)	889, 897, 1295, 1866, 2282
BtuMI	TCGCGA	1 cut(s)	1940
Cac8I	GCNNGC	7 cut(s)	661, 729, 1128, 1197, 1446, 2150, 2293
CaiI	CAGNNNCTG	2 cut(s)	1895, 2084
CciI	TCATGA	1 cut(s)	1324
CfoI	GCGC	2 cut(s)	1881, 2240
Cfr10I	RCCGGY	2 cut(s)	167, 236
Cfr13I	GGNCC	6 cut(s)	129, 680, 1100, 1390, 2032, 2369
Cfr42I	CCGCGG	1 cut(s)	249
CseI	GACGC	3 cut(s)	363, 530, 1082
Csp6I	GTAC	4 cut(s)	709, 946, 1258, 2182
CspCI	CAANNNNNGTGG	2 cut(s)	903, 938
CviQI	GTAC	4 cut(s)	709, 946, 1258, 2182
DinI	GGCGCC	1 cut(s)	1880
DpnI	GATC	9 cut(s)	636, 837, 1276, 1329, 1408, 1512, 1650, 1794, 2390
DpnII	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
DraI	TTTAAA	2 cut(s)	1584, 2107
Eam1104I	CTCTTC	3 cut(s)	90, 1489, 2197
EarI	CTCTTC	3 cut(s)	90, 1489, 2197
EciI	GGCGGA	3 cut(s)	17, 287, 349
Ecl136II	GAGCTC	1 cut(s)	395
Eco130I	CCWWGG	1 cut(s)	1481
Eco147I	AGGCCT	3 cut(s)	356, 715, 2338
Eco24I	GRGCYC	1 cut(s)	397
Eco32I	GATATC	1 cut(s)	1138
Eco47I	GGWCC	4 cut(s)	129, 1100, 1390, 2369
Eco53kI	GAGCTC	1 cut(s)	395
Eco57I	CTGAAG	2 cut(s)	1319, 1581
EcoICRI	GAGCTC	1 cut(s)	395
EcoNI	CCTNNNNNAGG	1 cut(s)	350
EcoO109I	RGGNCCY	3 cut(s)	680, 1100, 2032
EcoRII	CCWGG	6 cut(s)	676, 1130, 1738, 1881, 2200, 2397
EcoRV	GATATC	1 cut(s)	1138
EcoT14I	CCWWGG	1 cut(s)	1481
EcoT22I	ATGCAT	1 cut(s)	1785
EcoT38I	GRGCYC	1 cut(s)	397
EgeI	GGCGCC	1 cut(s)	1880
EheI	GGCGCC	1 cut(s)	1880
ErhI	CCWWGG	1 cut(s)	1481
Esp3I	CGTCTC	1 cut(s)	647
FaqI	GGGAC	5 cut(s)	83, 361, 574, 1652, 1972
FauI	CCCGC	3 cut(s)	253, 269, 656
FauNDI	CATATG	2 cut(s)	125, 1785
FbaI	TGATCA	1 cut(s)	1327
FokI	GGATG	1 cut(s)	2184
FriOI	GRGCYC	1 cut(s)	397
FspBI	CTAG	4 cut(s)	78, 158, 1394, 2177
GlaI	GCGC	2 cut(s)	1880, 2239
GsaI	CCCAGC	2 cut(s)	459, 2274
GsuI	CTGGAG	4 cut(s)	851, 1560, 1794, 2048
HaeII	RGCGCY	1 cut(s)	1882
HaeIII	GGCC	7 cut(s)	171, 356, 682, 715, 843, 2033, 2338
HapII	CCGG	7 cut(s)	168, 237, 390, 468, 768, 802, 1828
HgaI	GACGC	3 cut(s)	363, 530, 1082
HhaI	GCGC	2 cut(s)	1881, 2240
Hin1I	GRCGYC	2 cut(s)	522, 1879
Hin6I	GCGC	2 cut(s)	1879, 2238
HinP1I	GCGC	2 cut(s)	1879, 2238
HindIII	AAGCTT	2 cut(s)	488, 2146
HpaII	CCGG	7 cut(s)	168, 237, 390, 468, 768, 802, 1828
HphI	GGTGA	7 cut(s)	46, 58, 85, 101, 274, 335, 1430
Hpy166II	GTNNAC	6 cut(s)	692, 1092, 2076, 2182, 2329, 2416
Hpy8I	GTNNAC	6 cut(s)	692, 1092, 2076, 2182, 2329, 2416
Hpy99I	CGWCG	1 cut(s)	524
HpyAV	CCTTC	7 cut(s)	32, 73, 220, 492, 693, 1220, 1556
HpyCH4III	ACNGT	8 cut(s)	97, 592, 884, 1068, 1452, 1522, 2286, 2324
HpyCH4IV	ACGT	1 cut(s)	1256
HpySE526I	ACGT	1 cut(s)	1256
Hsp92I	GRCGYC	2 cut(s)	522, 1879
HspAI	GCGC	2 cut(s)	1879, 2238
KasI	GGCGCC	1 cut(s)	1878
Kpn2I	TCCGGA	1 cut(s)	767
Ksp22I	TGATCA	1 cut(s)	1327
KspI	CCGCGG	1 cut(s)	249
Kzo9I	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
LmnI	GCTCC	7 cut(s)	9, 197, 212, 392, 400, 1721, 2316
LweI	GCATC	4 cut(s)	875, 943, 1042, 1096
MaeI	CTAG	4 cut(s)	78, 158, 1394, 2177
MaeII	ACGT	1 cut(s)	1256
MaeIII	GTNAC	3 cut(s)	701, 1025, 2280
MalI	GATC	9 cut(s)	636, 837, 1276, 1329, 1408, 1512, 1650, 1794, 2390
MbiI	CCGCTC	2 cut(s)	192, 207
MboI	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
MboII	GAAGA	9 cut(s)	77, 262, 1312, 1506, 1855, 2184, 2330, 2433, 2441
MfeI	CAATTG	1 cut(s)	1284
MflI	RGATCY	4 cut(s)	1274, 1406, 1648, 2388
MhlI	GDGCHC	2 cut(s)	397, 2078
Mly113I	GGCGCC	1 cut(s)	1879
MlyI	GAGTC	7 cut(s)	245, 251, 1020, 1087, 1901, 1997, 2012
MmeI	TCCRAC	6 cut(s)	159, 279, 598, 721, 1213, 1828
Mph1103I	ATGCAT	1 cut(s)	1785
MroI	TCCGGA	1 cut(s)	767
MroXI	GAANNNNTTC	1 cut(s)	775
MseI	TTAA	6 cut(s)	1401, 1583, 1590, 2106, 2208, 2455
MslI	CAYNNNNRTG	3 cut(s)	642, 697, 1453
MspA1I	CMGCKG	4 cut(s)	45, 248, 1151, 2081
MspI	CCGG	7 cut(s)	168, 237, 390, 468, 768, 802, 1828
MspR9I	CCNGG	9 cut(s)	390, 469, 678, 803, 1132, 1740, 1883, 2202, 2399
MunI	CAATTG	1 cut(s)	1284
Mva1269I	GAATGC	6 cut(s)	1307, 1570, 1670, 1785, 1829, 1996
MvaI	CCWGG	6 cut(s)	678, 1132, 1740, 1883, 2202, 2399
MvnI	CGCG	3 cut(s)	248, 821, 1940
NarI	GGCGCC	1 cut(s)	1879
NciI	CCSGG	3 cut(s)	390, 469, 803
NcoI	CCATGG	1 cut(s)	1481
NdeI	CATATG	2 cut(s)	125, 1785
NdeII	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
NlaIV	GGNNCC	5 cut(s)	772, 858, 1547, 1880, 2371
NmeAIII	GCCGAG	2 cut(s)	126, 571
NmuCI	GTSAC	3 cut(s)	701, 1025, 2280
NruI	TCGCGA	1 cut(s)	1940
NsiI	ATGCAT	1 cut(s)	1785
NspI	RCATGY	5 cut(s)	421, 1033, 1080, 1169, 2066
PagI	TCATGA	1 cut(s)	1324
PceI	AGGCCT	3 cut(s)	356, 715, 2338
PctI	GAATGC	6 cut(s)	1307, 1570, 1670, 1785, 1829, 1996
PdmI	GAANNNNTTC	1 cut(s)	775
PfeI	GAWTC	5 cut(s)	572, 971, 1346, 1703, 2111
PflMI	CCANNNNNTGG	1 cut(s)	2100
PfoI	TCCNGGA	2 cut(s)	467, 2200
PleI	GAGTC	7 cut(s)	245, 251, 1019, 1087, 1900, 1997, 2012
PluTI	GGCGCC	1 cut(s)	1882
PpsI	GAGTC	7 cut(s)	245, 251, 1019, 1087, 1900, 1997, 2012
PpuMI	RGGWCCY	1 cut(s)	1100
Psp124BI	GAGCTC	1 cut(s)	397
Psp5II	RGGWCCY	1 cut(s)	1100
Psp6I	CCWGG	6 cut(s)	676, 1130, 1738, 1881, 2200, 2397
PspFI	CCCAGC	2 cut(s)	455, 2270
PspGI	CCWGG	6 cut(s)	676, 1130, 1738, 1881, 2200, 2397
PspN4I	GGNNCC	5 cut(s)	772, 858, 1547, 1880, 2371
PspPI	GGNCC	6 cut(s)	129, 680, 1100, 1390, 2032, 2369
PspPPI	RGGWCCY	1 cut(s)	1100
PstI	CTGCAG	1 cut(s)	1903
PstNI	CAGNNNCTG	2 cut(s)	1895, 2084
PsuI	RGATCY	4 cut(s)	1274, 1406, 1648, 2388
PvuII	CAGCTG	2 cut(s)	1151, 2081
RruI	TCGCGA	1 cut(s)	1940
RsaI	GTAC	4 cut(s)	710, 947, 1259, 2183
RsaNI	GTAC	4 cut(s)	709, 946, 1258, 2182
RseI	CAYNNNNRTG	3 cut(s)	642, 697, 1453
SacI	GAGCTC	1 cut(s)	397
SacII	CCGCGG	1 cut(s)	249
SaqAI	TTAA	6 cut(s)	1401, 1583, 1590, 2106, 2208, 2455
Sau3AI	GATC	9 cut(s)	634, 835, 1274, 1327, 1406, 1510, 1648, 1792, 2388
Sau96I	GGNCC	6 cut(s)	129, 680, 1100, 1390, 2032, 2369
SchI	GAGTC	7 cut(s)	245, 251, 1020, 1087, 1901, 1997, 2012
ScrFI	CCNGG	9 cut(s)	390, 469, 678, 803, 1132, 1740, 1883, 2202, 2399
SduI	GDGCHC	2 cut(s)	397, 2078
SfaNI	GCATC	4 cut(s)	875, 943, 1042, 1096
SfcI	CTRYAG	4 cut(s)	1278, 1518, 1899, 2241
SfoI	GGCGCC	1 cut(s)	1880
Sfr303I	CCGCGG	1 cut(s)	249
SgrBI	CCGCGG	1 cut(s)	249
SinI	GGWCC	4 cut(s)	129, 1100, 1390, 2369
SmiI	ATTTAAAT	1 cut(s)	1584
SmiMI	CAYNNNNRTG	3 cut(s)	642, 697, 1453
SmlI	CTYRAG	3 cut(s)	221, 350, 1095
SmoI	CTYRAG	3 cut(s)	221, 350, 1095
SpeI	ACTAGT	2 cut(s)	77, 2176
SseBI	AGGCCT	3 cut(s)	356, 715, 2338
SspDI	GGCGCC	1 cut(s)	1878
SspMI	CTAG	4 cut(s)	78, 158, 1394, 2177
SstI	GAGCTC	1 cut(s)	397
StuI	AGGCCT	3 cut(s)	356, 715, 2338
StyD4I	CCNGG	9 cut(s)	388, 467, 676, 801, 1130, 1738, 1881, 2200, 2397
StyI	CCWWGG	1 cut(s)	1481
SwaI	ATTTAAAT	1 cut(s)	1584
TaaI	ACNGT	8 cut(s)	97, 592, 884, 1068, 1452, 1522, 2286, 2324
TaiI	ACGT	1 cut(s)	1259
TaqI	TCGA	2 cut(s)	585, 1252
TatI	WGTACW	1 cut(s)	708
TauI	GCSGC	5 cut(s)	179, 204, 207, 309, 371
TfiI	GAWTC	5 cut(s)	572, 971, 1346, 1703, 2111
Tru1I	TTAA	6 cut(s)	1401, 1583, 1590, 2106, 2208, 2455
Tru9I	TTAA	6 cut(s)	1401, 1583, 1590, 2106, 2208, 2455
TscAI	CASTG	5 cut(s)	889, 897, 1302, 1873, 2289
TseFI	GTSAC	3 cut(s)	701, 1025, 2280
Tsp45I	GTSAC	3 cut(s)	701, 1025, 2280
TspDTI	ATGAA	3 cut(s)	801, 1663, 1836
TspGWI	ACGGA	2 cut(s)	1301, 1347
TspRI	CASTG	5 cut(s)	889, 897, 1302, 1873, 2289
Van91I	CCANNNNNTGG	1 cut(s)	2100
VneI	GTGCAC	1 cut(s)	2074
VpaK11BI	GGWCC	4 cut(s)	129, 1100, 1390, 2369
XagI	CCTNNNNNAGG	1 cut(s)	350
XapI	RAATTY	4 cut(s)	402, 463, 1316, 2432
XceI	RCATGY	5 cut(s)	421, 1033, 1080, 1169, 2066
XmnI	GAANNNNTTC	1 cut(s)	775
XspI	CTAG	4 cut(s)	78, 158, 1394, 2177
Zsp2I	ATGCAT	1 cut(s)	1785

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.