Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005602

Physical Location & Seq

Genomic Coordinates Forward (+)

400702 .. 405942

Gene Structure 5241 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGGTTTATTGGTTGATTCAAATGGGGAAGGGGGCGGCGGAGAAAGTGGAAGAAACGGCGGTTCATGGGGCGGTCGGAATAGTTTGATACGGCGGAAGCAGGTGGATTCTGTTCATGTGAAGTCAGGGGGTCATCAATTGGCGAAGGAGTTGACTGTTCCCCATCTTGTTGCAGTTGGGGTTGGCTCAACGATTGGAGCAGGAGTCTATATTCTTGTTGGAACAGTTGCTAGAGAGCATTCTGGACCAGCACTAGCAATTTCCTTTCTAATAGCTGGAATTGCAGCAGCCCTTTCTGCCTTTTGTTATGCTGAACTTGCAAGTCGGTGCCCTTCTGCAGGGAGTGCCTACCACTATACATATATATGCATTGGAGAAGGTGTTGCTTGGTTAGTCGGTTGGGCTTTGATTCTAGAATATACAATTGGTGGCTCAGCTGTTGCTCGGGGCATATCACCTAATCTGGCATTACTTTTCGGAGGAGAGGGCAGTCTGCCTGCTTTTATAGCCCGGCAACATATTCCTGCACTTGGTCTGGTGGTTGACCCATGTGCAGCAATTCTAGTAGTTATTGTTACAGGGCTCTTGTGTGTGGGAATAAAGGAGAGTACAGTAGCACAAGGCATTGTGACGATAGCAAATGCATGTGCAATGATATTTGTTGTAGTAGCTGGTACTTATCTGGGTTTCAAGTCTGGTTGGACTGGATATGAACTTCCTACTGGGTACTTCCCCTTTGGGGTGAATGGTATGCTTGCTGGGTCTGCCACTGTCTTCTTTGCATACATTGGTTTTGATTCAGTTGCCAGCACTGCTGAAGAGGTGAAGAATCCTCAACGAGATTTGCCACTCGGTATTGGTGCTTCACTATCTATTTGCTGTGCGTTGTATATGTTGGTTTCGATGGTCATTGTTGGTTTAGTGCCTTATTATGCAAGATCGATCCTGATACACCCATTTCCAGTGCATTTGCTAGTCATGGGATGCAGTGGGCAGTATGTGATAACTGTTGGAGCTGTTACTGCTCTCTGCTCAACATTGATGGGCTCTATTCTTCCTCAGCCACGAATCCTGATGGCAATGTCTAGAGATGGATTGTTGCCGCCATTTTTAGCGGATATTAATAAAAAAACTCAGGCTCCTGTCAAGAGTACATTAGCAACTGGGATTTGTTCTGCAGTCTTGGCCTTCTTCATGGATGTTTCAGAGTTGGCAGGAATGGTTAGCGTGGGTACACTTGTTGCATTCACTATGGTAGCAATATCTGTACTGATAATCAGATATGTTCCACCAGATGAGGTGCCTTTGCCTTCATCTCTTCGCGAATCCATTGATTCAGTGCGGTTGCGGCATGGAAGGAATTCTCAAGAGGTCAAAGAGGACGATCCTAAGACTAAGATTAATGTTAGTTCTTCGGAGGAGAGTACCAAACCTCTACTTGAGAAAGTGGATATCATGGTTGAACTTCCTCTGATCGGAAAGCAACTGCCTCTTATTAACTACACATTAAGTGAAGATAATAGGCGTAAAGTTGCTGCCTGGACCATAATGTTCACATGTGTCGGCGTGCTTCTTCTGACATATTCAGCATCAGATTTGGCCCTCCCCAGCTTTCTTCGCTATACATTATGTGGGGGTGGCGGTATTCTTCTTTTATTAGGTCTGATTGTGCTCACATGTATTGATCAAGATGATGCACGACACACCTTTGGGCACACAGGAGGTTTCTTATGCCCATTTGTCCCAGTGCTACCTATTGTCTGCATTCTCATCAACGTCTACCTACTGATTAATCTCGAGGCGGACACCTGGGCGCGTGTTGCTGTATGGCTGCTAGTAGGAGTGGTTATTTACGTGTTTTATGGCCGATCGCACAGCTCATTGGAGGATGCAGTTTACGTGCCAGTAGCTCACGTCGATGAAATCTTTCGGAGCTCGGGAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0008150 GO:0009705 GO:0012505 GO:0016020 GO:0031090 GO:0031967 GO:0031975 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050801 GO:0055081 GO:0065007 GO:0065008 GO:0080144 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

AA_permease_2 AA_permease_C

Protein Analysis

649

Amino Acids

68.48

Weight (kDa)

6.12

Isoelectric Point (pI)

35.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	54 - 433	2.8e-48	Amino acid permease
AA_permease	PF00324	55 - 425	9.6e-32	Amino acid permease
AA_permease_C	PF13906	576 - 626	8.3e-22	C-terminus of AA_permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58030 AT5G36940
fragaria_vesca	FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560 FvH4_1g28560
malus_domestica	MD12G1010500.v1.1 MD14G1007600.v1.1
prunus_persica	Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1 Prupe.7G012500_v2.0.a1
pyrus_communis	pycom12g00820 pycom14g00610
rosa_chinensis	RchiOBHm_Chr3g0496211
rosa_laevigata	RLG00000022551
rosa_roxburghii	Rroxscaffold_6G00389450
rosa_rugosa	Rorug03G0280500
rosa_samantha	Rh3AG327600 Rh3BG363200 Rh3BG363600 Rh3CG360600 Rh3DG363600
rosa_wichuraiana	Rw3G028690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	91
Acc36I	ACCTGC	1 cut(s)	91
AccB1I	GGYRCC	2 cut(s)	327, 1300
AccI	GTMKAC	1 cut(s)	1779
AccII	CGCG	2 cut(s)	1323, 1816
AclWI	GGATC	2 cut(s)	937, 1379
AcoI	YGGCCR	1 cut(s)	1864
AcsI	RAATTY	1 cut(s)	1360
AcuI	CTGAAG	1 cut(s)	837
AfaI	GTAC	7 cut(s)	610, 676, 728, 1153, 1234, 1269, 1426
AfiI	CCNNNNNNNGG	4 cut(s)	338, 530, 739, 1475
AflIII	ACRYGT	3 cut(s)	1556, 1676, 1854
AgsI	TTSAA	3 cut(s)	21, 691, 1463
AjiI	CACGTC	1 cut(s)	1915
AjnI	CCWGG	2 cut(s)	1538, 1808
AjuI	GAANNNNNNNTTGG	2 cut(s)	408, 440
AluBI	AGCT	8 cut(s)	275, 437, 671, 1016, 1611, 1878, 1910, 1935
AluI	AGCT	8 cut(s)	275, 437, 671, 1016, 1611, 1878, 1910, 1935
Alw21I	GWGCWC	2 cut(s)	1674, 1937
AlwI	GGATC	2 cut(s)	937, 1379
Ama87I	CYCGRG	3 cut(s)	444, 1796, 1936
AoxI	GGCC	3 cut(s)	1185, 1599, 1864
ApeKI	GCWGC	5 cut(s)	284, 287, 554, 1535, 1831
ApoI	RAATTY	1 cut(s)	1360
AseI	ATTAAT	3 cut(s)	1122, 1401, 1791
Asp700I	GAANNNNTTC	2 cut(s)	1360, 1926
AspLEI	GCGC	1 cut(s)	1816
AspS9I	GGNCC	3 cut(s)	245, 1542, 1600
AsuC2I	CCSGG	1 cut(s)	511
AsuHPI	GGTGA	3 cut(s)	447, 754, 835
AvaI	CYCGRG	3 cut(s)	444, 1796, 1936
AvaII	GGWCC	2 cut(s)	245, 1542
BaeGI	GKGCMC	2 cut(s)	332, 1716
BaeI	ACNNNNGTAYC	2 cut(s)	1224, 1257
BanI	GGYRCC	2 cut(s)	327, 1300
BanII	GRGCYC	3 cut(s)	585, 1049, 1937
BarI	GAAGNNNNNNTAC	2 cut(s)	847, 879
BbsI	GAAGAC	1 cut(s)	766
Bbv12I	GWGCWC	2 cut(s)	1674, 1937
BbvCI	CCTCAGC	1 cut(s)	1059
BbvI	GCAGC	5 cut(s)	296, 299, 566, 1522, 1818
BccI	CCATC	5 cut(s)	171, 898, 1036, 1069, 1085
BceAI	ACGGC	2 cut(s)	73, 107
BciT130I	CCWGG	2 cut(s)	1540, 1810
BclI	TGATCA	1 cut(s)	1684
BcnI	CCSGG	1 cut(s)	511
BfaI	CTAG	7 cut(s)	231, 254, 413, 563, 974, 1086, 1835
BfmI	CTRYAG	2 cut(s)	336, 1176
BfuAI	ACCTGC	1 cut(s)	91
BisI	GCNGC	8 cut(s)	37, 285, 288, 555, 1103, 1349, 1536, 1832
BlpI	GCTNAGC	1 cut(s)	433
BlsI	GCNGC	8 cut(s)	38, 286, 289, 556, 1104, 1350, 1537, 1833
Bme1390I	CCNGG	3 cut(s)	511, 1540, 1810
Bme18I	GGWCC	2 cut(s)	245, 1542
BmeT110I	CYCGRG	3 cut(s)	444, 1796, 1936
BmgBI	CACGTC	1 cut(s)	1915
BmgT120I	GGNCC	3 cut(s)	245, 1542, 1600
BmiI	GGNNCC	3 cut(s)	329, 1140, 1302
BmrFI	CCNGG	3 cut(s)	511, 1540, 1810
BmrI	ACTGGG	3 cut(s)	732, 1173, 1739
BmsI	GCATC	4 cut(s)	974, 1598, 1684, 1879
BmuI	ACTGGG	3 cut(s)	732, 1173, 1739
BpiI	GAAGAC	1 cut(s)	766
Bpu10I	CCTNAGC	1 cut(s)	1059
Bpu1102I	GCTNAGC	1 cut(s)	433
BpuEI	CTTGAG	2 cut(s)	1350, 1460
BpuMI	CCSGG	1 cut(s)	511
Bsa29I	ATCGAT	1 cut(s)	941
BsaAI	YACGTR	2 cut(s)	1855, 1900
BsaJI	CCNNGG	1 cut(s)	1809
BsaXI	ACNNNNNCTCC	6 cut(s)	189, 219, 366, 396, 1123, 1153
Bsc4I	CCNNNNNNNGG	4 cut(s)	338, 530, 739, 1475
Bse1I	ACTGG	6 cut(s)	709, 727, 962, 1168, 1745, 1904
Bse3DI	GCAATG	2 cut(s)	657, 1086
BseBI	CCWGG	2 cut(s)	1540, 1810
BseCI	ATCGAT	1 cut(s)	941
BseDI	CCNNGG	1 cut(s)	1809
BseGI	GGATG	3 cut(s)	989, 1204, 1894
BseLI	CCNNNNNNNGG	4 cut(s)	338, 530, 739, 1475
BseMI	GCAATG	2 cut(s)	657, 1086
BseMII	CTCAG	3 cut(s)	447, 1073, 1148
BseNI	ACTGG	6 cut(s)	709, 727, 962, 1168, 1745, 1904
BseRI	GAGGAG	2 cut(s)	495, 1433
BseSI	GKGCMC	2 cut(s)	332, 1716
BseXI	GCAGC	5 cut(s)	296, 299, 566, 1522, 1818
BseYI	CCCAGC	2 cut(s)	758, 1607
BsgI	GTGCAG	2 cut(s)	510, 573
Bsh1236I	CGCG	2 cut(s)	1323, 1816
Bsh1285I	CGRYCG	2 cut(s)	76, 1871
BshFI	GGCC	3 cut(s)	1187, 1601, 1866
BshNI	GGYRCC	2 cut(s)	327, 1300
BshVI	ATCGAT	1 cut(s)	941
BsiEI	CGRYCG	2 cut(s)	76, 1871
BsiHKAI	GWGCWC	2 cut(s)	1674, 1937
BsiHKCI	CYCGRG	3 cut(s)	444, 1796, 1936
BsiSI	CCGG	1 cut(s)	511
BslFI	GGGAC	1 cut(s)	1727
BslI	CCNNNNNNNGG	4 cut(s)	338, 530, 739, 1475
BsmFI	GGGAC	1 cut(s)	1727
BsmI	GAATGC	3 cut(s)	238, 1244, 1764
BsnI	GGCC	3 cut(s)	1187, 1601, 1866
BsoBI	CYCGRG	3 cut(s)	444, 1796, 1936
Bsp1286I	GDGCHC	6 cut(s)	332, 585, 1049, 1674, 1716, 1937
Bsp143I	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
Bsp1720I	GCTNAGC	1 cut(s)	433
Bsp68I	TCGCGA	1 cut(s)	1323
BspANI	GGCC	3 cut(s)	1187, 1601, 1866
BspCNI	CTCAG	3 cut(s)	446, 1072, 1147
BspDI	ATCGAT	1 cut(s)	941
BspFNI	CGCG	2 cut(s)	1323, 1816
BspLI	GGNNCC	3 cut(s)	329, 1140, 1302
BspMAI	CTGCAG	2 cut(s)	340, 1180
BspMI	ACCTGC	1 cut(s)	91
BspPI	GGATC	2 cut(s)	937, 1379
BspT107I	GGYRCC	2 cut(s)	327, 1300
BsrDI	GCAATG	2 cut(s)	657, 1086
BsrI	ACTGG	6 cut(s)	709, 727, 962, 1168, 1745, 1904
BssECI	CCNNGG	1 cut(s)	1809
BssMI	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
Bst2UI	CCWGG	2 cut(s)	1540, 1810
Bst4CI	ACNGT	5 cut(s)	157, 226, 613, 772, 1009
Bst6I	CTCTTC	2 cut(s)	813, 1323
BstAPI	GCANNNNNTGC	1 cut(s)	344
BstBAI	YACGTR	2 cut(s)	1855, 1900
BstC8I	GCNNGC	4 cut(s)	498, 756, 808, 1568
BstDEI	CTNAG	5 cut(s)	433, 1059, 1134, 1389, 1395
BstENI	CCTNNNNNAGG	1 cut(s)	336
BstF5I	GGATG	3 cut(s)	989, 1204, 1894
BstFNI	CGCG	2 cut(s)	1323, 1816
BstHHI	GCGC	1 cut(s)	1816
BstKTI	GATC	6 cut(s)	941, 945, 1387, 1476, 1687, 1871
BstMBI	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
BstMCI	CGRYCG	2 cut(s)	76, 1871
BstNI	CCWGG	2 cut(s)	1540, 1810
BstNSI	RCATGY	3 cut(s)	648, 1560, 1680
BstSCI	CCNGG	3 cut(s)	509, 1538, 1808
BstSFI	CTRYAG	2 cut(s)	336, 1176
BstSLI	GKGCMC	2 cut(s)	332, 1716
BstUI	CGCG	2 cut(s)	1323, 1816
BstV1I	GCAGC	5 cut(s)	296, 299, 566, 1522, 1818
BstV2I	GAAGAC	1 cut(s)	766
Bsu15I	ATCGAT	1 cut(s)	941
BsuRI	GGCC	3 cut(s)	1187, 1601, 1866
BsuTUI	ATCGAT	1 cut(s)	941
BtrI	CACGTC	1 cut(s)	1915
BtsCI	GGATG	3 cut(s)	989, 1204, 1894
BtsI	GCAGTG	2 cut(s)	810, 994
BtsIMutI	CAGTG	6 cut(s)	768, 810, 969, 994, 1344, 1752
BtuMI	TCGCGA	1 cut(s)	1323
BveI	ACCTGC	1 cut(s)	91
Cac8I	GCNNGC	4 cut(s)	498, 756, 808, 1568
CfoI	GCGC	1 cut(s)	1816
Cfr13I	GGNCC	3 cut(s)	245, 1542, 1600
ClaI	ATCGAT	1 cut(s)	941
Csp6I	GTAC	7 cut(s)	609, 675, 727, 1152, 1233, 1268, 1425
CviQI	GTAC	7 cut(s)	609, 675, 727, 1152, 1233, 1268, 1425
DdeI	CTNAG	5 cut(s)	433, 1059, 1134, 1389, 1395
DpnI	GATC	6 cut(s)	940, 944, 1386, 1475, 1686, 1870
DpnII	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
EaeI	YGGCCR	1 cut(s)	1864
Eam1104I	CTCTTC	2 cut(s)	813, 1323
EarI	CTCTTC	2 cut(s)	813, 1323
EciI	GGCGGA	3 cut(s)	54, 109, 1817
Ecl136II	GAGCTC	1 cut(s)	1935
Eco24I	GRGCYC	3 cut(s)	585, 1049, 1937
Eco32I	GATATC	1 cut(s)	1453
Eco47I	GGWCC	2 cut(s)	245, 1542
Eco53kI	GAGCTC	1 cut(s)	1935
Eco57I	CTGAAG	1 cut(s)	837
Eco88I	CYCGRG	3 cut(s)	444, 1796, 1936
EcoICRI	GAGCTC	1 cut(s)	1935
EcoNI	CCTNNNNNAGG	1 cut(s)	336
EcoRI	GAATTC	1 cut(s)	1360
EcoRII	CCWGG	2 cut(s)	1538, 1808
EcoRV	GATATC	1 cut(s)	1453
EcoT22I	ATGCAT	2 cut(s)	371, 646
EcoT38I	GRGCYC	3 cut(s)	585, 1049, 1937
FaqI	GGGAC	1 cut(s)	1727
FbaI	TGATCA	1 cut(s)	1684
FblI	GTMKAC	1 cut(s)	1779
Fnu4HI	GCNGC	8 cut(s)	37, 285, 288, 555, 1103, 1349, 1536, 1832
FokI	GGATG	3 cut(s)	996, 1211, 1901
FriOI	GRGCYC	3 cut(s)	585, 1049, 1937
Fsp4HI	GCNGC	8 cut(s)	37, 285, 288, 555, 1103, 1349, 1536, 1832
FspBI	CTAG	7 cut(s)	231, 254, 413, 563, 974, 1086, 1835
GlaI	GCGC	1 cut(s)	1815
GluI	GCNGC	8 cut(s)	37, 285, 288, 555, 1103, 1349, 1536, 1832
GsaI	CCCAGC	2 cut(s)	762, 1611
HaeIII	GGCC	3 cut(s)	1187, 1601, 1866
HapII	CCGG	1 cut(s)	511
HhaI	GCGC	1 cut(s)	1816
Hin6I	GCGC	1 cut(s)	1814
HinP1I	GCGC	1 cut(s)	1814
HincII	GTYRAC	2 cut(s)	153, 544
HindII	GTYRAC	2 cut(s)	153, 544
HinfI	GANTC	9 cut(s)	17, 107, 204, 409, 797, 829, 1068, 1325, 1334
HpaII	CCGG	1 cut(s)	511
HphI	GGTGA	3 cut(s)	447, 754, 835
Hpy166II	GTNNAC	6 cut(s)	153, 544, 1235, 1554, 1780, 1897
Hpy8I	GTNNAC	6 cut(s)	153, 544, 1235, 1554, 1780, 1897
Hpy99I	CGWCG	1 cut(s)	1919
HpyAV	CCTTC	7 cut(s)	23, 139, 342, 371, 1198, 1320, 1350
HpyCH4III	ACNGT	5 cut(s)	157, 226, 613, 772, 1009
HpyCH4IV	ACGT	4 cut(s)	1776, 1854, 1899, 1914
HpyF3I	CTNAG	5 cut(s)	433, 1059, 1134, 1389, 1395
HpySE526I	ACGT	4 cut(s)	1776, 1854, 1899, 1914
HspAI	GCGC	1 cut(s)	1814
Ksp22I	TGATCA	1 cut(s)	1684
Kzo9I	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
LmnI	GCTCC	4 cut(s)	197, 1013, 1144, 1932
Lsp1109I	GCAGC	5 cut(s)	296, 299, 566, 1522, 1818
LweI	GCATC	4 cut(s)	974, 1598, 1684, 1879
MaeI	CTAG	7 cut(s)	231, 254, 413, 563, 974, 1086, 1835
MaeII	ACGT	4 cut(s)	1776, 1854, 1899, 1914
MaeIII	GTNAC	3 cut(s)	574, 628, 1018
MalI	GATC	6 cut(s)	940, 944, 1386, 1475, 1686, 1870
MboI	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
MfeI	CAATTG	2 cut(s)	137, 423
MhlI	GDGCHC	6 cut(s)	332, 585, 1049, 1674, 1716, 1937
MluCI	AATT	7 cut(s)	137, 258, 279, 423, 558, 1360, 1942
MlyI	GAGTC	1 cut(s)	213
MmeI	TCCRAC	4 cut(s)	56, 199, 680, 991
Mph1103I	ATGCAT	2 cut(s)	371, 646
MroXI	GAANNNNTTC	2 cut(s)	1360, 1926
MseI	TTAA	6 cut(s)	1122, 1401, 1497, 1508, 1791, 1945
MslI	CAYNNNNRTG	2 cut(s)	364, 1917
MspA1I	CMGCKG	1 cut(s)	437
MspI	CCGG	1 cut(s)	511
MspR9I	CCNGG	3 cut(s)	511, 1540, 1810
MunI	CAATTG	2 cut(s)	137, 423
Mva1269I	GAATGC	3 cut(s)	238, 1244, 1764
MvaI	CCWGG	2 cut(s)	1540, 1810
MvnI	CGCG	2 cut(s)	1323, 1816
NciI	CCSGG	1 cut(s)	511
NdeII	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
NlaIV	GGNNCC	3 cut(s)	329, 1140, 1302
NmuCI	GTSAC	1 cut(s)	628
NruI	TCGCGA	1 cut(s)	1323
NsiI	ATGCAT	2 cut(s)	371, 646
NspI	RCATGY	3 cut(s)	648, 1560, 1680
PaeR7I	CTCGAG	1 cut(s)	1796
PaqCI	CACCTGC	1 cut(s)	91
PciI	ACATGT	2 cut(s)	1556, 1676
PctI	GAATGC	3 cut(s)	238, 1244, 1764
PdmI	GAANNNNTTC	2 cut(s)	1360, 1926
PfeI	GAWTC	8 cut(s)	17, 107, 409, 797, 829, 1068, 1325, 1334
PkrI	GCNGC	8 cut(s)	38, 286, 289, 556, 1104, 1350, 1537, 1833
Ple19I	CGATCG	1 cut(s)	1871
PleI	GAGTC	1 cut(s)	212
PpsI	GAGTC	1 cut(s)	212
Ppu21I	YACGTR	2 cut(s)	1855, 1900
PscI	ACATGT	2 cut(s)	1556, 1676
PshBI	ATTAAT	3 cut(s)	1122, 1401, 1791
Psp124BI	GAGCTC	1 cut(s)	1937
Psp6I	CCWGG	2 cut(s)	1538, 1808
PspFI	CCCAGC	2 cut(s)	758, 1607
PspGI	CCWGG	2 cut(s)	1538, 1808
PspN4I	GGNNCC	3 cut(s)	329, 1140, 1302
PspPI	GGNCC	3 cut(s)	245, 1542, 1600
PstI	CTGCAG	2 cut(s)	340, 1180
PvuI	CGATCG	1 cut(s)	1871
PvuII	CAGCTG	1 cut(s)	437
RruI	TCGCGA	1 cut(s)	1323
RsaI	GTAC	7 cut(s)	610, 676, 728, 1153, 1234, 1269, 1426
RsaNI	GTAC	7 cut(s)	609, 675, 727, 1152, 1233, 1268, 1425
RseI	CAYNNNNRTG	2 cut(s)	364, 1917
SacI	GAGCTC	1 cut(s)	1937
SaqAI	TTAA	6 cut(s)	1122, 1401, 1497, 1508, 1791, 1945
SatI	GCNGC	8 cut(s)	37, 285, 288, 555, 1103, 1349, 1536, 1832
Sau3AI	GATC	6 cut(s)	938, 942, 1384, 1473, 1684, 1868
Sau96I	GGNCC	3 cut(s)	245, 1542, 1600
SchI	GAGTC	1 cut(s)	213
ScrFI	CCNGG	3 cut(s)	511, 1540, 1810
SduI	GDGCHC	6 cut(s)	332, 585, 1049, 1674, 1716, 1937
SfaNI	GCATC	4 cut(s)	974, 1598, 1684, 1879
SfcI	CTRYAG	2 cut(s)	336, 1176
Sfr274I	CTCGAG	1 cut(s)	1796
SinI	GGWCC	2 cut(s)	245, 1542
SlaI	CTCGAG	1 cut(s)	1796
SmiMI	CAYNNNNRTG	2 cut(s)	364, 1917
SmlI	CTYRAG	3 cut(s)	1365, 1439, 1796
SmoI	CTYRAG	3 cut(s)	1365, 1439, 1796
Sse9I	AATT	7 cut(s)	137, 258, 279, 423, 558, 1360, 1942
SspMI	CTAG	7 cut(s)	231, 254, 413, 563, 974, 1086, 1835
SstI	GAGCTC	1 cut(s)	1937
StyD4I	CCNGG	3 cut(s)	509, 1538, 1808
TaaI	ACNGT	5 cut(s)	157, 226, 613, 772, 1009
TaiI	ACGT	4 cut(s)	1779, 1857, 1902, 1917
TaqI	TCGA	4 cut(s)	902, 941, 1797, 1917
TasI	AATT	7 cut(s)	137, 258, 279, 423, 558, 1360, 1942
TatI	WGTACW	3 cut(s)	608, 1151, 1267
TauI	GCSGC	3 cut(s)	39, 1105, 1351
TfiI	GAWTC	8 cut(s)	17, 107, 409, 797, 829, 1068, 1325, 1334
Tru1I	TTAA	6 cut(s)	1122, 1401, 1497, 1508, 1791, 1945
Tru9I	TTAA	6 cut(s)	1122, 1401, 1497, 1508, 1791, 1945
TscAI	CASTG	6 cut(s)	775, 817, 969, 994, 1344, 1752
TseFI	GTSAC	1 cut(s)	628
TseI	GCWGC	5 cut(s)	284, 287, 554, 1535, 1831
Tsp45I	GTSAC	1 cut(s)	628
TspDTI	ATGAA	6 cut(s)	54, 104, 726, 1183, 1302, 1935
TspRI	CASTG	6 cut(s)	775, 817, 969, 994, 1344, 1752
VpaK11BI	GGWCC	2 cut(s)	245, 1542
VspI	ATTAAT	3 cut(s)	1122, 1401, 1791
XagI	CCTNNNNNAGG	1 cut(s)	336
XapI	RAATTY	1 cut(s)	1360
XbaI	TCTAGA	2 cut(s)	412, 1085
XceI	RCATGY	3 cut(s)	648, 1560, 1680
XhoI	CTCGAG	1 cut(s)	1796
XmiI	GTMKAC	1 cut(s)	1779
XmnI	GAANNNNTTC	2 cut(s)	1360, 1926
XspI	CTAG	7 cut(s)	231, 254, 413, 563, 974, 1086, 1835
Zsp2I	ATGCAT	2 cut(s)	371, 646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.