pycom14g06600

glycerol-3-phosphate dehydrogenase NAD(

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
6542631 .. 6545406
2776 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g06600.2

Sequence Viewer

Length: 1407 bp
ATGGATCGTAATTTGTACTCGAACGGGTCTGTTCACAACTTTAATGCATTGGAGGAGAAGCTTGATGAGCTCCGGAGCCGCCTTGGAAAGGCTAATGGTGACCCTTTGAGAATTGTTGGTGTCGGGGCGGGTGCTTGGGGCAGTGTTTTTGCTGCTGTGTTGCAAGATAGCTATGGTCAATTTCGAGACAAGGTTCAAATAAGGATATGGAGAAGACCCGGAAGAGCTGTTGATAGAGCCACGGCTGAACATATTTTTGAAGTGATCAATTCGAGGGAAGATGTGTTGAGGAGGTTGATCAGGCGATGTGCATATTTGAAATATGTGGAGGCAAGGCTTGGGGATCGAACACTTTATGCCGATGAGATTTTGAAAGATGGGTTTTGTTTGAACATGGTTGAGACGCCGCTGTGCCCCTTGAAGGTTGTGACTAGTTTGCAGGAGGCTGTTTGGGATGCTGATATTGTGGTGAATGGCTTGCCATCAACGGAAACAAAAGATGTGTTTGAAGAGATTAGTAATTATTGGAATGAAAGAATCACAGATCCTATTATCATCTCTTTGGCAAAAGGTATCGAGGCCGCACTTGAGCCTCTCCCGCATATCATAACTCCCACGCAAATGATTCATCAAGCAACCGGTGTACCTATAGAGAACATACTTTATCTGGGTGGCCCAAACATTGCCTCAGAAATCTACAACAAAGAATATGCTAATGCTCGAATATGCGGAGCTGAAAAGTGGAGAAAACCTCTCGCGAAGTTCTTAAGGCAACCCCATTTTATTGTCTGGGACAATAGCGATCTTGTTACACATGAAGTCATGGGTGGCTTAAAGAATGTCTATGCCATTGGAGCAGGGATGGTAGCAGCCCTCACAAAGGAGAGTGCTACCAGCAAATCCGTATACTTTGCACATTGTACCTCAGAGATGATATTTATCACTCATTTGTTGACGGAAGAGCCCGAGAAACTTGCAGGGCCTTTGTTGGCCGACACATATGTAACCCTGTTGAAAGGTCGCAATGCGTGGTATGGGCAAATGTTAGCCAAAGGGGAACTAAACCGGGATATGGGTGAAAACATCAGTGGCAAAGGAATGATTCAGGGTGTCTCTGCAGTTAAAGCATTTTATGAACTTCTCAGTCAGTCGAGCCTAAATGTGTTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTAGAGCTCTGCCCCATCTTGAAGACGCTATATAAAATACTGATAACACGGAAGCAATCATCGCAAGCTATTCTTCAAGCGTTGAGGGATGAAAACTTGATCGATCCCAGGGAACGCATTGAGATTGCACACAGCCATGTCTTCTATAGGCCTTCCCTCCTCGGACAGCCTTTGACTAGTTTCCGACTGCAAGATAAAGTGGTGATATAA

Protein Analysis

469

Amino Acids

52.49

Weight (kDa)

6.62

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 906
AccII CGCG 1 cut(s) 758
AccIII TCCGGA 1 cut(s) 72
AciI CCGC 6 cut(s) 79, 128, 407, 582, 599, 729
AclWI GGATC 4 cut(s) 12, 351, 539, 1295
AcoI YGGCCR 1 cut(s) 990
AcuI CTGAAG 1 cut(s) 1194
AcyI GRCGYC 1 cut(s) 404
AfaI GTAC 3 cut(s) 17, 645, 922
AfiI CCNNNNNNNGG 4 cut(s) 88, 421, 880, 1072
AflII CTTAAG 1 cut(s) 766
AgeI ACCGGT 1 cut(s) 638
AhlI ACTAGT 2 cut(s) 431, 1373
AjnI CCWGG 1 cut(s) 1304
AluBI AGCT 7 cut(s) 61, 70, 171, 227, 734, 1204, 1265
AluI AGCT 7 cut(s) 61, 70, 171, 227, 734, 1204, 1265
Alw21I GWGCWC 2 cut(s) 72, 1206
Alw26I GTCTC 3 cut(s) 180, 395, 1117
AlwI GGATC 4 cut(s) 12, 351, 539, 1295
Ama87I CYCGRG 1 cut(s) 965
Aor13HI TCCGGA 1 cut(s) 72
AoxI GGCC 5 cut(s) 579, 673, 980, 990, 1346
ApeKI GCWGC 2 cut(s) 152, 869
AsiGI ACCGGT 1 cut(s) 638
AspS9I GGNCC 2 cut(s) 674, 980
AsuC2I CCSGG 2 cut(s) 219, 1067
AsuHPI GGTGA 3 cut(s) 110, 481, 1088
AvaI CYCGRG 1 cut(s) 965
BaeGI GKGCMC 1 cut(s) 416
BaeI ACNNNNGTAYC 2 cut(s) 627, 660
BanII GRGCYC 3 cut(s) 72, 966, 1206
BbsI GAAGAC 3 cut(s) 220, 1226, 1330
Bbv12I GWGCWC 2 cut(s) 72, 1206
BbvI GCAGC 2 cut(s) 139, 881
BccI CCATC 4 cut(s) 371, 490, 856, 1220
BceAI ACGGC 1 cut(s) 258
BcgI CGANNNNNNTGC 2 cut(s) 956, 990
BciT130I CCWGG 1 cut(s) 1306
BclI TGATCA 2 cut(s) 264, 297
BcnI CCSGG 2 cut(s) 219, 1067
BcoDI GTCTC 3 cut(s) 180, 395, 1117
BcuI ACTAGT 2 cut(s) 431, 1373
BfaI CTAG 2 cut(s) 432, 1374
BfmI CTRYAG 4 cut(s) 648, 1116, 1197, 1342
BfrI CTTAAG 1 cut(s) 766
BisI GCNGC 5 cut(s) 79, 153, 407, 582, 870
BlsI GCNGC 5 cut(s) 80, 154, 408, 583, 871
Bme1390I CCNGG 3 cut(s) 219, 1067, 1306
BmeT110I CYCGRG 1 cut(s) 965
BmgT120I GGNCC 2 cut(s) 674, 980
BmiI GGNNCC 1 cut(s) 77
BmrFI CCNGG 3 cut(s) 219, 1067, 1306
BmsI GCATC 2 cut(s) 445, 1177
BpiI GAAGAC 3 cut(s) 220, 1226, 1330
BplI GAGNNNNNCTC 2 cut(s) 736, 768
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 2 cut(s) 219, 1067
Bsa29I ATCGAT 1 cut(s) 1299
BsaBI GATNNNNATC 1 cut(s) 938
BsaHI GRCGYC 1 cut(s) 404
BsaJI CCNNGG 5 cut(s) 82, 240, 1304, 1305, 1357
BsaWI WCCGGW 2 cut(s) 72, 638
Bsc4I CCNNNNNNNGG 4 cut(s) 88, 421, 880, 1072
Bse118I RCCGGY 1 cut(s) 638
Bse3DI GCAATG 2 cut(s) 681, 1030
Bse8I GATNNNNATC 1 cut(s) 938
BseAI TCCGGA 1 cut(s) 72
BseBI CCWGG 1 cut(s) 1306
BseCI ATCGAT 1 cut(s) 1299
BseDI CCNNGG 5 cut(s) 82, 240, 1304, 1305, 1357
BseGI GGATG 4 cut(s) 460, 867, 1168, 1291
BseJI GATNNNNATC 1 cut(s) 938
BseLI CCNNNNNNNGG 4 cut(s) 88, 421, 880, 1072
BseMI GCAATG 2 cut(s) 681, 1030
BseMII CTCAG 3 cut(s) 702, 939, 1156
BseRI GAGGAG 3 cut(s) 68, 304, 1346
BseSI GKGCMC 1 cut(s) 416
BseXI GCAGC 2 cut(s) 139, 881
Bsh1236I CGCG 1 cut(s) 758
BshFI GGCC 5 cut(s) 581, 675, 982, 992, 1348
BshTI ACCGGT 1 cut(s) 638
BshVI ATCGAT 1 cut(s) 1299
BsiHKAI GWGCWC 2 cut(s) 72, 1206
BsiHKCI CYCGRG 1 cut(s) 965
BsiSI CCGG 4 cut(s) 73, 219, 639, 1066
BslFI GGGAC 1 cut(s) 806
BslI CCNNNNNNNGG 4 cut(s) 88, 421, 880, 1072
BsmAI GTCTC 3 cut(s) 180, 395, 1117
BsmBI CGTCTC 1 cut(s) 395
BsmFI GGGAC 1 cut(s) 806
BsnI GGCC 5 cut(s) 581, 675, 982, 992, 1348
BsoBI CYCGRG 1 cut(s) 965
Bsp1286I GDGCHC 4 cut(s) 72, 416, 966, 1206
Bsp13I TCCGGA 1 cut(s) 72
Bsp143I GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
Bsp68I TCGCGA 1 cut(s) 758
BspACI CCGC 6 cut(s) 79, 128, 407, 582, 599, 729
BspANI GGCC 5 cut(s) 581, 675, 982, 992, 1348
BspCNI CTCAG 3 cut(s) 701, 938, 1155
BspDI ATCGAT 1 cut(s) 1299
BspEI TCCGGA 1 cut(s) 72
BspFNI CGCG 1 cut(s) 758
BspLI GGNNCC 1 cut(s) 77
BspMAI CTGCAG 1 cut(s) 1120
BspPI GGATC 4 cut(s) 12, 351, 539, 1295
BspQI GCTCTTC 2 cut(s) 217, 954
BspTI CTTAAG 1 cut(s) 766
BsrDI GCAATG 2 cut(s) 681, 1030
BsrFI RCCGGY 1 cut(s) 638
BssAI RCCGGY 1 cut(s) 638
BssECI CCNNGG 5 cut(s) 82, 240, 1304, 1305, 1357
BssMI GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
BssNAI GTATAC 1 cut(s) 907
BssNI GRCGYC 1 cut(s) 404
BssT1I CCWWGG 1 cut(s) 82
Bst1107I GTATAC 1 cut(s) 907
Bst2UI CCWGG 1 cut(s) 1306
Bst6I CTCTTC 3 cut(s) 217, 504, 954
BstACI GRCGYC 1 cut(s) 404
BstAFI CTTAAG 1 cut(s) 766
BstC8I GCNNGC 2 cut(s) 479, 1263
BstDEI CTNAG 3 cut(s) 688, 925, 1142
BstDSI CCRYGG 1 cut(s) 240
BstEII GGTNACC 1 cut(s) 98
BstENI CCTNNNNNAGG 2 cut(s) 86, 878
BstF5I GGATG 4 cut(s) 460, 867, 1168, 1291
BstFNI CGCG 1 cut(s) 758
BstKTI GATC 8 cut(s) 7, 267, 300, 346, 547, 805, 1299, 1303
BstMAI GTCTC 3 cut(s) 180, 395, 1117
BstMBI GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
BstMWI GCNNNNNNNGC 5 cut(s) 67, 598, 854, 1124, 1258
BstNI CCWGG 1 cut(s) 1306
BstPI GGTNACC 1 cut(s) 98
BstSCI CCNGG 3 cut(s) 217, 1065, 1304
BstSFI CTRYAG 4 cut(s) 648, 1116, 1197, 1342
BstSLI GKGCMC 1 cut(s) 416
BstUI CGCG 1 cut(s) 758
BstV1I GCAGC 2 cut(s) 139, 881
BstV2I GAAGAC 3 cut(s) 220, 1226, 1330
BstX2I RGATCY 1 cut(s) 544
BstYI RGATCY 1 cut(s) 544
BstZ17I GTATAC 1 cut(s) 907
Bsu15I ATCGAT 1 cut(s) 1299
BsuRI GGCC 5 cut(s) 581, 675, 982, 992, 1348
BsuTUI ATCGAT 1 cut(s) 1299
BtgI CCRYGG 1 cut(s) 240
BtgZI GCGATG 2 cut(s) 319, 1242
BtsCI GGATG 4 cut(s) 460, 867, 1168, 1291
BtsI GCAGTG 1 cut(s) 148
BtsIMutI CAGTG 2 cut(s) 148, 1093
BtuMI TCGCGA 1 cut(s) 758
Cac8I GCNNGC 2 cut(s) 479, 1263
Cfr10I RCCGGY 1 cut(s) 638
Cfr13I GGNCC 2 cut(s) 674, 980
ClaI ATCGAT 1 cut(s) 1299
CseI GACGC 2 cut(s) 412, 1231
Csp6I GTAC 3 cut(s) 16, 644, 921
CspAI ACCGGT 1 cut(s) 638
CviAII CATG 4 cut(s) 394, 815, 823, 1334
CviQI GTAC 3 cut(s) 16, 644, 921
DdeI CTNAG 3 cut(s) 688, 925, 1142
DpnI GATC 8 cut(s) 6, 266, 299, 345, 546, 804, 1298, 1302
DpnII GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
EaeI YGGCCR 1 cut(s) 990
Eam1104I CTCTTC 3 cut(s) 217, 504, 954
EarI CTCTTC 3 cut(s) 217, 504, 954
Ecl136II GAGCTC 2 cut(s) 70, 1204
Eco130I CCWWGG 1 cut(s) 82
Eco147I AGGCCT 1 cut(s) 1348
Eco24I GRGCYC 3 cut(s) 72, 966, 1206
Eco53kI GAGCTC 2 cut(s) 70, 1204
Eco57I CTGAAG 1 cut(s) 1194
Eco88I CYCGRG 1 cut(s) 965
Eco91I GGTNACC 1 cut(s) 98
EcoICRI GAGCTC 2 cut(s) 70, 1204
EcoNI CCTNNNNNAGG 2 cut(s) 86, 878
EcoO109I RGGNCCY 1 cut(s) 980
EcoO65I GGTNACC 1 cut(s) 98
EcoRII CCWGG 1 cut(s) 1304
EcoT14I CCWWGG 1 cut(s) 82
EcoT22I ATGCAT 1 cut(s) 49
EcoT38I GRGCYC 3 cut(s) 72, 966, 1206
ErhI CCWWGG 1 cut(s) 82
Esp3I CGTCTC 1 cut(s) 395
FaeI CATG 4 cut(s) 397, 818, 826, 1337
FalI AAGNNNNNCTT 2 cut(s) 1254, 1286
FaqI GGGAC 1 cut(s) 806
FatI CATG 4 cut(s) 393, 814, 822, 1333
FauI CCCGC 2 cut(s) 121, 606
FauNDI CATATG 1 cut(s) 1000
FbaI TGATCA 2 cut(s) 264, 297
FblI GTMKAC 1 cut(s) 906
Fnu4HI GCNGC 5 cut(s) 79, 153, 407, 582, 870
FokI GGATG 4 cut(s) 467, 874, 1155, 1298
FriOI GRGCYC 3 cut(s) 72, 966, 1206
Fsp4HI GCNGC 5 cut(s) 79, 153, 407, 582, 870
FspBI CTAG 2 cut(s) 432, 1374
GluI GCNGC 5 cut(s) 79, 153, 407, 582, 870
HaeIII GGCC 5 cut(s) 581, 675, 982, 992, 1348
HapII CCGG 4 cut(s) 73, 219, 639, 1066
HgaI GACGC 2 cut(s) 412, 1231
Hin1I GRCGYC 1 cut(s) 404
Hin1II CATG 4 cut(s) 397, 818, 826, 1337
HincII GTYRAC 1 cut(s) 954
HindII GTYRAC 1 cut(s) 954
HindIII AAGCTT 1 cut(s) 59
HinfI GANTC 3 cut(s) 537, 625, 1102
HpaII CCGG 4 cut(s) 73, 219, 639, 1066
HphI GGTGA 3 cut(s) 110, 481, 1088
Hpy166II GTNNAC 4 cut(s) 34, 644, 907, 954
Hpy188I TCNGA 4 cut(s) 691, 928, 1361, 1382
Hpy188III TCNNGA 5 cut(s) 73, 185, 757, 1172, 1216
Hpy8I GTNNAC 4 cut(s) 34, 644, 907, 954
HpyAV CCTTC 2 cut(s) 415, 1359
HpyF10VI GCNNNNNNNGC 5 cut(s) 67, 598, 854, 1124, 1258
HpyF3I CTNAG 3 cut(s) 688, 925, 1142
Hsp92I GRCGYC 1 cut(s) 404
Hsp92II CATG 4 cut(s) 397, 818, 826, 1337
Kpn2I TCCGGA 1 cut(s) 72
Ksp22I TGATCA 2 cut(s) 264, 297
Kzo9I GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
LguI GCTCTTC 2 cut(s) 217, 954
LmnI GCTCC 5 cut(s) 75, 75, 731, 854, 1198
Lsp1109I GCAGC 2 cut(s) 139, 881
LweI GCATC 2 cut(s) 445, 1177
MaeI CTAG 2 cut(s) 432, 1374
MaeIII GTNAC 4 cut(s) 98, 427, 808, 1003
MalI GATC 8 cut(s) 6, 266, 299, 345, 546, 804, 1298, 1302
MboI GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
MboII GAAGA 9 cut(s) 225, 234, 290, 521, 971, 1187, 1231, 1262, 1330
MflI RGATCY 1 cut(s) 544
MhlI GDGCHC 4 cut(s) 72, 416, 966, 1206
MluCI AATT 5 cut(s) 10, 111, 179, 268, 520
MmeI TCCRAC 1 cut(s) 1405
Mph1103I ATGCAT 1 cut(s) 49
MroI TCCGGA 1 cut(s) 72
MseI TTAA 4 cut(s) 42, 767, 833, 1122
MslI CAYNNNNRTG 2 cut(s) 620, 1332
MspA1I CMGCKG 1 cut(s) 409
MspCI CTTAAG 1 cut(s) 766
MspI CCGG 4 cut(s) 73, 219, 639, 1066
MspR9I CCNGG 3 cut(s) 219, 1067, 1306
MvaI CCWGG 1 cut(s) 1306
MvnI CGCG 1 cut(s) 758
MwoI GCNNNNNNNGC 5 cut(s) 67, 598, 854, 1124, 1258
NciI CCSGG 2 cut(s) 219, 1067
NdeI CATATG 1 cut(s) 1000
NdeII GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
NlaIII CATG 4 cut(s) 397, 818, 826, 1337
NlaIV GGNNCC 1 cut(s) 77
NmuCI GTSAC 2 cut(s) 98, 427
NruI TCGCGA 1 cut(s) 758
NsiI ATGCAT 1 cut(s) 49
PasI CCCWGGG 1 cut(s) 1305
PceI AGGCCT 1 cut(s) 1348
PciSI GCTCTTC 2 cut(s) 217, 954
PfeI GAWTC 3 cut(s) 537, 625, 1102
PinAI ACCGGT 1 cut(s) 638
PkrI GCNGC 5 cut(s) 80, 154, 408, 583, 871
Psp124BI GAGCTC 2 cut(s) 72, 1206
Psp6I CCWGG 1 cut(s) 1304
PspEI GGTNACC 1 cut(s) 98
PspGI CCWGG 1 cut(s) 1304
PspN4I GGNNCC 1 cut(s) 77
PspPI GGNCC 2 cut(s) 674, 980
PstI CTGCAG 1 cut(s) 1120
PsuI RGATCY 1 cut(s) 544
RruI TCGCGA 1 cut(s) 758
RsaI GTAC 3 cut(s) 17, 645, 922
RsaNI GTAC 3 cut(s) 16, 644, 921
RseI CAYNNNNRTG 2 cut(s) 620, 1332
SacI GAGCTC 2 cut(s) 72, 1206
SapI GCTCTTC 2 cut(s) 217, 954
SaqAI TTAA 4 cut(s) 42, 767, 833, 1122
SatI GCNGC 5 cut(s) 79, 153, 407, 582, 870
Sau3AI GATC 8 cut(s) 4, 264, 297, 343, 544, 802, 1296, 1300
Sau96I GGNCC 2 cut(s) 674, 980
ScrFI CCNGG 3 cut(s) 219, 1067, 1306
SduI GDGCHC 4 cut(s) 72, 416, 966, 1206
SfaNI GCATC 2 cut(s) 445, 1177
SfcI CTRYAG 4 cut(s) 648, 1116, 1197, 1342
SmiMI CAYNNNNRTG 2 cut(s) 620, 1332
SmlI CTYRAG 2 cut(s) 587, 766
SmoI CTYRAG 2 cut(s) 587, 766
SpeI ACTAGT 2 cut(s) 431, 1373
Sse9I AATT 5 cut(s) 10, 111, 179, 268, 520
SseBI AGGCCT 1 cut(s) 1348
SsiI CCGC 6 cut(s) 79, 128, 407, 582, 599, 729
SspMI CTAG 2 cut(s) 432, 1374
SstI GAGCTC 2 cut(s) 72, 1206
StuI AGGCCT 1 cut(s) 1348
StyD4I CCNGG 3 cut(s) 217, 1065, 1304
StyI CCWWGG 1 cut(s) 82
TaqI TCGA 8 cut(s) 20, 184, 272, 346, 576, 721, 1151, 1299
TasI AATT 5 cut(s) 10, 111, 179, 268, 520
TatI WGTACW 1 cut(s) 15
TauI GCSGC 3 cut(s) 81, 409, 584
TfiI GAWTC 3 cut(s) 537, 625, 1102
Tru1I TTAA 4 cut(s) 42, 767, 833, 1122
Tru9I TTAA 4 cut(s) 42, 767, 833, 1122
TscAI CASTG 2 cut(s) 148, 1093
TseFI GTSAC 2 cut(s) 98, 427
TseI GCWGC 2 cut(s) 152, 869
Tsp45I GTSAC 2 cut(s) 98, 427
TspDTI ATGAA 5 cut(s) 546, 617, 831, 1149, 1302
TspGWI ACGGA 4 cut(s) 503, 892, 971, 1261
TspRI CASTG 2 cut(s) 148, 1093
Vha464I CTTAAG 1 cut(s) 766
XagI CCTNNNNNAGG 2 cut(s) 86, 878
XmiI GTMKAC 1 cut(s) 906
XspI CTAG 2 cut(s) 432, 1374
Zsp2I ATGCAT 1 cut(s) 49
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.