Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0009990

Physical Location & Seq

Genomic Coordinates Forward (+)

10066068 .. 10070592

Gene Structure 4525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGTCAGTCTTATCAATTTCATCATCGTCGTCGTCGTCGTCCGCAGCCGTTGGATTCTGTCCTTCCCACAAACACGCCCTTCCCAATGCCTCATTTCTCACCCCACTCCATCTCGTTGGGGCCCACCCAGCAAGTGACCAGAAGAATACTAAGAAGCAGAAGAGGAGAGCCGCCGCCGTTGGAGGAGGAGGAGTCATGGCCACCAAGCTCACAGTCCTCAGGACCCACCATACCCTTTTCTGTGATGAATTGTTTAAGGACAGGAGCTTCCAAGCAAAAACTAGAGATCCTCTGTGTTTCCGGGCACAATATATCTTATCCACTACAGCGCGTTCAACATCAACAGCAACAACTACAGTGCTTGATATGGAGAAGCTCAGACTACCTTCCTTAGAATTTAATTCCGATTCTTTGGCTTCAAGTAGACCGTGGACATACACAGGGGCAATTGATCCTTCCACTGAGGCGAACTTTGGATCAACTTTAGCTACAGAAACTCTTCTTACGAGTGAAGAGGCTGTAATAGCAGCTGCTGCGGCTGAAGCTGTTACTCTTGCAAAAGCAGCTCTGAAGGTTGCAAAGGATGTGGCTATGCTGGTTAGCACTAATCACTCTGCTAAACCAGAAATTTCATCTCCAGTTTCTCCAGAGACTAATGCTTTGCATTTCAATTGGGCTCAGCATATAGAAACTAAACCGGTTAGAGTAGGAGCTTCCATGGGAGCTGAAACTGCATTTTTGGAAGACCATTTCATTCAATCTGCAGATAAAGAGTCAGAAGAAGTGGAGCGAACAAATGAAGAATTTGAACTTCTGCAGGAGCAACTTTCCAAGGGTATAACGGCAAAATCGAGTCGTCAAACCGAAAGGAAGGCCAGAAGATCAAAAGCAGCAGAAAAGGCTGCTGCAAGTGTTGTGTCTGTGAAGTCTGGTTCAACCAGTAGAAAAAAGCGTTCTTCAGTACAAGAAATAGACCACTCTGATCCCTTGCGTTACTTGAGATCTACTACCCACACATCTCGGCTTCTTACGGCGAACGAAGAAATTGAGCTTTCTGCAGGAATTCAGGTACTACTAGAACTACTGAAACTGGAAAAGCTGCAGGAGGAGCTTGCGCAAAGATGTGGCAGGCAGCCCACCATTGCACAATGGGCTGCAGCAGCAGGAGTTGATCAGAAGACTTTGAGGAAGCGTGTAAACTATGGTATTCTGTGCAAAGACAAAATGATCAAGAGCAACATAAGGCTTGTTATATCAATTGCAAAAAATTATCAGGGATCTGGGATGAATCTTCAAGATCTTGTGCAGCAAGGATGTCGAGGCCTTGTAAGAGGTGCAGAGAAATTTGACGCTTCAAAGGGTTTTAAGTTCTCAACCTATGCACACTGGTGGATTAAACAGGCTGTTCGAAAATCTCTTTCCGACCAGTCCAGAACAATTCGCTTACCCTTTCACATGGTGGAGGCGACGTATAGAGTTAAAGAGGCCAAAAAGCAATTGTATAGTTTAAATGGAAGACATCCTAATGATGAAGAAGTTGCAGAGGCAACAGGGCTATCAATGAAAAGGCTTTCTGCTGTATTACTGACTCCAAAAGCCCCTAGATCTCTGGACCAGAAAATTGGAATTAACCTGAATCTTAAACCTTCGGAAGTAATCTCAGATCCCGACGCAGAAACAGCAGAAGATCTGCTGATGAAAAAGTTTATGAAACAGGATTTGGAGAAGGTACTAGATAGTCTCAATCCTAGAGAGAAGCAGGTTGTCAGATGGAGGTTTGGATTGGAGGATGGAAGGATGAAGACATTGCAAGAGATAGGGGAGCTGATGGGTGTTAGTAGGGAGAGAATTAGACAAATAGAGTCATGTGCGTTTCGAAAACTGAAGAACAAGAAAAGAACTAAACATTTACAGCAATATGCAGTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000988 GO:0000990 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006399 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009639 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010114 GO:0010467 GO:0010468 GO:0010556 GO:0016043 GO:0016070 GO:0016987 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043254 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097659 GO:0104004 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2000142 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sigma70_r1_2 Sigma70_r2 Sigma70_r3 Sigma70_r4

Protein Analysis

644

Amino Acids

71.23

Weight (kDa)

9.61

Isoelectric Point (pI)

47.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sigma70_r2	PF04542	409 - 479	7.2e-20	Sigma-70 region 2
Sigma70_r3	PF04539	488 - 563	1.9e-16	Sigma-70 region 3
Sigma70_r4	PF04545	577 - 629	1.3e-18	Sigma-70, region 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009990)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08540
fragaria_vesca	FvH4_1g29160 FvH4_1g29160
malus_domestica	MD12G1111900.v1.1 MD14G1100900.v1.1
prunus_persica	Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1 Prupe.7G021900_v2.0.a1
pyrus_communis	pycom12g09170 pycom14g08810
rosa_chinensis	RchiOBHm_Chr3g0494351 RchiOBHm_Chr3g0494481
rosa_laevigata	RLG00000022672
rosa_multiflora	Rmu_sc0000152.1_g000008
rosa_roxburghii	Rroxscaffold_6G00391100
rosa_rugosa	Rorug03G0265600
rosa_samantha	Rh3BG350900 Rh3CG347600 Rh3DG350200
rosa_wichuraiana	Rw3G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1116
Acc36I	ACCTGC	1 cut(s)	1750
AccI	GTMKAC	1 cut(s)	424
AccII	CGCG	1 cut(s)	331
AciI	CCGC	4 cut(s)	42, 171, 174, 536
AclWI	GGATC	6 cut(s)	281, 446, 484, 977, 1285, 1658
AcoI	YGGCCR	1 cut(s)	198
AcsI	RAATTY	5 cut(s)	395, 627, 803, 1062, 1343
AcuI	CTGAAG	4 cut(s)	561, 590, 942, 1904
AdeI	CACNNNGTG	1 cut(s)	1459
AfaI	GTAC	3 cut(s)	963, 1071, 1731
AgeI	ACCGGT	1 cut(s)	697
AgsI	TTSAA	8 cut(s)	336, 420, 670, 758, 809, 936, 1295, 1356
AjuI	GAANNNNNNNTTGG	2 cut(s)	1703, 1735
AleI	CACNNNNGTG	1 cut(s)	1387
Alw26I	GTCTC	2 cut(s)	644, 1745
AlwI	GGATC	6 cut(s)	281, 446, 484, 977, 1285, 1658
AlwNI	CAGNNNCTG	1 cut(s)	533
AoxI	GGCC	5 cut(s)	120, 198, 873, 1321, 1485
ApaI	GGGCCC	1 cut(s)	124
ApoI	RAATTY	5 cut(s)	395, 627, 803, 1062, 1343
ArsI	GACNNNNNNTTYG	2 cut(s)	643, 675
AsiGI	ACCGGT	1 cut(s)	697
Asp700I	GAANNNNTTC	1 cut(s)	498
AspLEI	GCGC	2 cut(s)	331, 1117
AspS9I	GGNCC	4 cut(s)	120, 121, 222, 1612
AsuC2I	CCSGG	1 cut(s)	302
AsuHPI	GGTGA	1 cut(s)	91
AsuII	TTCGAA	2 cut(s)	1408, 1876
AvaII	GGWCC	2 cut(s)	222, 1612
AxyI	CCTNAGG	1 cut(s)	218
BaeGI	GKGCMC	2 cut(s)	124, 307
BalI	TGGCCA	1 cut(s)	200
BanII	GRGCYC	2 cut(s)	124, 679
BbsI	GAAGAC	4 cut(s)	750, 1184, 1522, 1808
BccI	CCATC	4 cut(s)	117, 1764, 1784, 1822
BceAI	ACGGC	4 cut(s)	32, 161, 858, 1047
BcgI	CGANNNNNNTGC	2 cut(s)	1298, 1332
BclI	TGATCA	2 cut(s)	1171, 1227
BcnI	CCSGG	1 cut(s)	302
BcoDI	GTCTC	2 cut(s)	644, 1745
BfaI	CTAG	5 cut(s)	282, 1076, 1602, 1733, 1749
BfmI	CTRYAG	8 cut(s)	324, 354, 489, 762, 815, 1056, 1100, 1155
BfuAI	ACCTGC	1 cut(s)	1750
BglII	AGATCT	4 cut(s)	1001, 1297, 1604, 1687
BlpI	GCTNAGC	1 cut(s)	678
Bme1390I	CCNGG	1 cut(s)	302
Bme18I	GGWCC	2 cut(s)	222, 1612
BmgT120I	GGNCC	4 cut(s)	120, 121, 222, 1612
BmiI	GGNNCC	3 cut(s)	121, 122, 224
BmrFI	CCNGG	1 cut(s)	302
BpiI	GAAGAC	4 cut(s)	750, 1184, 1522, 1808
BpmI	CTGGAG	2 cut(s)	621, 630
Bpu1102I	GCTNAGC	1 cut(s)	678
Bpu14I	TTCGAA	2 cut(s)	1408, 1876
BpuEI	CTTGAG	1 cut(s)	1018
BpuMI	CCSGG	1 cut(s)	302
BsaJI	CCNNGG	3 cut(s)	428, 717, 831
BsaWI	WCCGGW	1 cut(s)	697
BsaXI	ACNNNNNCTCC	4 cut(s)	177, 207, 1454, 1484
Bse118I	RCCGGY	1 cut(s)	697
Bse1I	ACTGG	5 cut(s)	638, 939, 1095, 1391, 1426
Bse21I	CCTNAGG	1 cut(s)	218
Bse3DI	GCAATG	2 cut(s)	1140, 1805
BseDI	CCNNGG	3 cut(s)	428, 717, 831
BseGI	GGATG	6 cut(s)	589, 1290, 1319, 1519, 1795, 1803
BseMI	GCAATG	2 cut(s)	1140, 1805
BseMII	CTCAG	5 cut(s)	232, 391, 453, 692, 1674
BseNI	ACTGG	5 cut(s)	638, 939, 1095, 1391, 1426
BseRI	GAGGAG	5 cut(s)	178, 198, 201, 204, 1121
BseSI	GKGCMC	2 cut(s)	124, 307
BseYI	CCCAGC	1 cut(s)	127
BsgI	GTGCAG	2 cut(s)	1325, 1356
Bsh1236I	CGCG	1 cut(s)	331
BshFI	GGCC	5 cut(s)	122, 200, 875, 1323, 1487
BshTI	ACCGGT	1 cut(s)	697
BsiSI	CCGG	2 cut(s)	301, 698
BsmAI	GTCTC	2 cut(s)	644, 1745
BsnI	GGCC	5 cut(s)	122, 200, 875, 1323, 1487
Bsp119I	TTCGAA	2 cut(s)	1408, 1876
Bsp120I	GGGCCC	1 cut(s)	120
Bsp1286I	GDGCHC	3 cut(s)	124, 307, 679
Bsp1720I	GCTNAGC	1 cut(s)	678
Bsp19I	CCATGG	1 cut(s)	717
BspACI	CCGC	4 cut(s)	42, 171, 174, 536
BspANI	GGCC	5 cut(s)	122, 200, 875, 1323, 1487
BspCNI	CTCAG	5 cut(s)	231, 390, 454, 691, 1673
BspFNI	CGCG	1 cut(s)	331
BspLI	GGNNCC	3 cut(s)	121, 122, 224
BspMAI	CTGCAG	5 cut(s)	766, 819, 1060, 1104, 1159
BspMI	ACCTGC	1 cut(s)	1750
BspPI	GGATC	6 cut(s)	281, 446, 484, 977, 1285, 1658
BspT104I	TTCGAA	2 cut(s)	1408, 1876
BsrDI	GCAATG	2 cut(s)	1140, 1805
BsrFI	RCCGGY	1 cut(s)	697
BsrI	ACTGG	5 cut(s)	638, 939, 1095, 1391, 1426
BssAI	RCCGGY	1 cut(s)	697
BssECI	CCNNGG	3 cut(s)	428, 717, 831
BssT1I	CCWWGG	2 cut(s)	717, 831
Bst4CI	ACNGT	3 cut(s)	214, 358, 429
Bst6I	CTCTTC	3 cut(s)	155, 504, 507
BstAPI	GCANNNNNTGC	1 cut(s)	533
BstBI	TTCGAA	2 cut(s)	1408, 1876
BstC8I	GCNNGC	2 cut(s)	1113, 1130
BstDEI	CTNAG	7 cut(s)	150, 218, 377, 391, 462, 678, 1660
BstDSI	CCRYGG	2 cut(s)	428, 717
BstF5I	GGATG	6 cut(s)	589, 1290, 1319, 1519, 1795, 1803
BstFNI	CGCG	1 cut(s)	331
BstHHI	GCGC	2 cut(s)	331, 1117
BstMAI	GTCTC	2 cut(s)	644, 1745
BstSCI	CCNGG	1 cut(s)	300
BstSFI	CTRYAG	8 cut(s)	324, 354, 489, 762, 815, 1056, 1100, 1155
BstSLI	GKGCMC	2 cut(s)	124, 307
BstUI	CGCG	1 cut(s)	331
BstV2I	GAAGAC	4 cut(s)	750, 1184, 1522, 1808
BstX2I	RGATCY	7 cut(s)	286, 1001, 1277, 1297, 1604, 1663, 1687
BstXI	CCANNNNNNTGG	2 cut(s)	116, 1622
BstYI	RGATCY	7 cut(s)	286, 1001, 1277, 1297, 1604, 1663, 1687
Bsu36I	CCTNAGG	1 cut(s)	218
BsuRI	GGCC	5 cut(s)	122, 200, 875, 1323, 1487
BtgI	CCRYGG	2 cut(s)	428, 717
BtsCI	GGATG	6 cut(s)	589, 1290, 1319, 1519, 1795, 1803
BtsIMutI	CAGTG	3 cut(s)	363, 459, 1384
BveI	ACCTGC	1 cut(s)	1750
Cac8I	GCNNGC	2 cut(s)	1113, 1130
CaiI	CAGNNNCTG	1 cut(s)	533
CfoI	GCGC	2 cut(s)	331, 1117
Cfr10I	RCCGGY	1 cut(s)	697
Cfr13I	GGNCC	4 cut(s)	120, 121, 222, 1612
CseI	GACGC	2 cut(s)	1358, 1679
Csp6I	GTAC	3 cut(s)	962, 1070, 1730
CspAI	ACCGGT	1 cut(s)	697
CspCI	CAANNNNNGTGG	2 cut(s)	567, 602
CviAII	CATG	4 cut(s)	196, 718, 1456, 1866
CviQI	GTAC	3 cut(s)	962, 1070, 1730
DdeI	CTNAG	7 cut(s)	150, 218, 377, 391, 462, 678, 1660
DraI	TTTAAA	1 cut(s)	1509
DraIII	CACNNNGTG	1 cut(s)	1459
EaeI	YGGCCR	1 cut(s)	198
Eam1104I	CTCTTC	3 cut(s)	155, 504, 507
EarI	CTCTTC	3 cut(s)	155, 504, 507
Eco130I	CCWWGG	2 cut(s)	717, 831
Eco147I	AGGCCT	1 cut(s)	1323
Eco24I	GRGCYC	2 cut(s)	124, 679
Eco47I	GGWCC	2 cut(s)	222, 1612
Eco57I	CTGAAG	4 cut(s)	561, 590, 942, 1904
Eco81I	CCTNAGG	1 cut(s)	218
EcoO109I	RGGNCCY	2 cut(s)	120, 222
EcoRI	GAATTC	1 cut(s)	1062
EcoT14I	CCWWGG	2 cut(s)	717, 831
EcoT38I	GRGCYC	2 cut(s)	124, 679
ErhI	CCWWGG	2 cut(s)	717, 831
FaeI	CATG	4 cut(s)	199, 721, 1459, 1869
FatI	CATG	4 cut(s)	195, 717, 1455, 1865
FbaI	TGATCA	2 cut(s)	1171, 1227
FblI	GTMKAC	1 cut(s)	424
FokI	GGATG	6 cut(s)	596, 1297, 1326, 1506, 1802, 1810
FriOI	GRGCYC	2 cut(s)	124, 679
FspBI	CTAG	5 cut(s)	282, 1076, 1602, 1733, 1749
FspI	TGCGCA	1 cut(s)	1116
GlaI	GCGC	2 cut(s)	330, 1116
GsaI	CCCAGC	1 cut(s)	131
GsuI	CTGGAG	2 cut(s)	621, 630
HaeIII	GGCC	5 cut(s)	122, 200, 875, 1323, 1487
HapII	CCGG	2 cut(s)	301, 698
HgaI	GACGC	2 cut(s)	1358, 1679
HhaI	GCGC	2 cut(s)	331, 1117
Hin1II	CATG	4 cut(s)	199, 721, 1459, 1869
Hin6I	GCGC	2 cut(s)	329, 1115
HinP1I	GCGC	2 cut(s)	329, 1115
HinfI	GANTC	9 cut(s)	54, 192, 407, 773, 853, 1288, 1588, 1636, 1862
HpaII	CCGG	2 cut(s)	301, 698
HphI	GGTGA	1 cut(s)	91
Hpy166II	GTNNAC	3 cut(s)	425, 432, 1198
Hpy188III	TCNNGA	7 cut(s)	220, 647, 1231, 1295, 1431, 1610, 1667
Hpy8I	GTNNAC	3 cut(s)	425, 432, 1198
Hpy99I	CGWCG	6 cut(s)	31, 34, 37, 40, 1471, 1673
HpyAV	CCTTC	9 cut(s)	72, 89, 396, 465, 565, 865, 1656, 1720, 1788
HpyCH4III	ACNGT	3 cut(s)	214, 358, 429
HpyCH4IV	ACGT	1 cut(s)	1469
HpyF3I	CTNAG	7 cut(s)	150, 218, 377, 391, 462, 678, 1660
HpySE526I	ACGT	1 cut(s)	1469
Hsp92II	CATG	4 cut(s)	199, 721, 1459, 1869
HspAI	GCGC	2 cut(s)	329, 1115
Ksp22I	TGATCA	2 cut(s)	1171, 1227
LmnI	GCTCC	7 cut(s)	264, 710, 722, 787, 820, 1108, 1822
MaeI	CTAG	5 cut(s)	282, 1076, 1602, 1733, 1749
MaeII	ACGT	1 cut(s)	1469
MaeIII	GTNAC	3 cut(s)	134, 547, 992
MfeI	CAATTG	4 cut(s)	447, 670, 1257, 1496
MflI	RGATCY	7 cut(s)	286, 1001, 1277, 1297, 1604, 1663, 1687
MhlI	GDGCHC	3 cut(s)	124, 307, 679
MlsI	TGGCCA	1 cut(s)	200
MluNI	TGGCCA	1 cut(s)	200
MlyI	GAGTC	5 cut(s)	201, 782, 862, 1582, 1871
MmeI	TCCRAC	3 cut(s)	31, 160, 1446
Mox20I	TGGCCA	1 cut(s)	200
MroXI	GAANNNNTTC	1 cut(s)	498
MscI	TGGCCA	1 cut(s)	200
MseI	TTAA	8 cut(s)	255, 399, 1365, 1395, 1479, 1508, 1629, 1641
MslI	CAYNNNNRTG	2 cut(s)	1387, 1524
Msp20I	TGGCCA	1 cut(s)	200
MspA1I	CMGCKG	1 cut(s)	530
MspI	CCGG	2 cut(s)	301, 698
MspR9I	CCNGG	1 cut(s)	302
MunI	CAATTG	4 cut(s)	447, 670, 1257, 1496
MvnI	CGCG	1 cut(s)	331
NciI	CCSGG	1 cut(s)	302
NcoI	CCATGG	1 cut(s)	717
NlaIII	CATG	4 cut(s)	199, 721, 1459, 1869
NlaIV	GGNNCC	3 cut(s)	121, 122, 224
NmeAIII	GCCGAG	1 cut(s)	1000
NmuCI	GTSAC	1 cut(s)	134
NsbI	TGCGCA	1 cut(s)	1116
NspV	TTCGAA	2 cut(s)	1408, 1876
OliI	CACNNNNGTG	1 cut(s)	1387
PceI	AGGCCT	1 cut(s)	1323
PcsI	WCGNNNNNNNCGW	3 cut(s)	32, 35, 848
PdmI	GAANNNNTTC	1 cut(s)	498
PfeI	GAWTC	4 cut(s)	54, 407, 1288, 1636
PinAI	ACCGGT	1 cut(s)	697
PleI	GAGTC	5 cut(s)	200, 781, 861, 1582, 1870
PpsI	GAGTC	5 cut(s)	200, 781, 861, 1582, 1870
PpuMI	RGGWCCY	1 cut(s)	222
Psp5II	RGGWCCY	1 cut(s)	222
PspFI	CCCAGC	1 cut(s)	127
PspN4I	GGNNCC	3 cut(s)	121, 122, 224
PspOMI	GGGCCC	1 cut(s)	120
PspPI	GGNCC	4 cut(s)	120, 121, 222, 1612
PspPPI	RGGWCCY	1 cut(s)	222
PstI	CTGCAG	5 cut(s)	766, 819, 1060, 1104, 1159
PstNI	CAGNNNCTG	1 cut(s)	533
PsuI	RGATCY	7 cut(s)	286, 1001, 1277, 1297, 1604, 1663, 1687
PvuII	CAGCTG	1 cut(s)	530
RsaI	GTAC	3 cut(s)	963, 1071, 1731
RsaNI	GTAC	3 cut(s)	962, 1070, 1730
RseI	CAYNNNNRTG	2 cut(s)	1387, 1524
SaqAI	TTAA	8 cut(s)	255, 399, 1365, 1395, 1479, 1508, 1629, 1641
Sau96I	GGNCC	4 cut(s)	120, 121, 222, 1612
SchI	GAGTC	5 cut(s)	201, 782, 862, 1582, 1871
ScrFI	CCNGG	1 cut(s)	302
SduI	GDGCHC	3 cut(s)	124, 307, 679
SfcI	CTRYAG	8 cut(s)	324, 354, 489, 762, 815, 1056, 1100, 1155
SfuI	TTCGAA	2 cut(s)	1408, 1876
SinI	GGWCC	2 cut(s)	222, 1612
SmiMI	CAYNNNNRTG	2 cut(s)	1387, 1524
SmlI	CTYRAG	1 cut(s)	997
SmoI	CTYRAG	1 cut(s)	997
SseBI	AGGCCT	1 cut(s)	1323
SsiI	CCGC	4 cut(s)	42, 171, 174, 536
SspMI	CTAG	5 cut(s)	282, 1076, 1602, 1733, 1749
StuI	AGGCCT	1 cut(s)	1323
StyD4I	CCNGG	1 cut(s)	300
StyI	CCWWGG	2 cut(s)	717, 831
TaaI	ACNGT	3 cut(s)	214, 358, 429
TaiI	ACGT	1 cut(s)	1472
TaqI	TCGA	4 cut(s)	851, 1318, 1408, 1876
TatI	WGTACW	1 cut(s)	961
TauI	GCSGC	3 cut(s)	173, 176, 539
TfiI	GAWTC	4 cut(s)	54, 407, 1288, 1636
Tru1I	TTAA	8 cut(s)	255, 399, 1365, 1395, 1479, 1508, 1629, 1641
Tru9I	TTAA	8 cut(s)	255, 399, 1365, 1395, 1479, 1508, 1629, 1641
TscAI	CASTG	3 cut(s)	363, 466, 1391
TseFI	GTSAC	1 cut(s)	134
Tsp45I	GTSAC	1 cut(s)	134
TspRI	CASTG	3 cut(s)	363, 466, 1391
VpaK11BI	GGWCC	2 cut(s)	222, 1612
XapI	RAATTY	5 cut(s)	395, 627, 803, 1062, 1343
XmiI	GTMKAC	1 cut(s)	424
XmnI	GAANNNNTTC	1 cut(s)	498
XspI	CTAG	5 cut(s)	282, 1076, 1602, 1733, 1749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.