Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0010367

Physical Location & Seq

Genomic Coordinates Forward (+)

16203206 .. 16208528

Gene Structure 5323 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGCGGATCCAATCGCAGCGCCGCACAGATCCGCCGCGAACCTCTTCTCGGACCCGCTCGACTCCCACCCTCTCTGGTTCAAGCCCGCGCTCTTCCTCTCGCCGGAGTTCGATTCCGAGTTGTACATCTCCGACCTCCGCACCTTCGTCCCCTTCGACACGCTCCGATCCGAGCTCCAATCCTACCTGGCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGAGACTACGCCGACTTCGTCAACCTCAGCACCAAGCTTGTCGACGTCGACTCCGCCGTCGTCCGCATGCGGGCCCCGCTCGTCGAGCTGAGGGAGAAGATCGAGCAGTTCAGAGGCTCAGTGCAGAACTCGCTCGTGGCCTTGACGAACGGATTGAAGCAGAGATTAGAGGCGGCCGAGGCCAGAGAGGTCTTGGAGCTCCTGCTTGATACGTTTCATGTCGTTTCTAAGGTTGAAAAACTAATAAAAGAGCTGCCGAGTGTGCCGGCTGATTGGTCGAACGGAGATGTAAATTTGGCAGAGAAGAATTCTTTTAGCAATGGAACTTCCTTACAACATGCTGAGAATGGAACAAATCTCAGAGACACTCAAAGCATGCTTTTGGAGAGAATTGCTAGTGAGATGAACCGGCTAAAGTTCTATATCGCTCACGCAAAGAACCTGCCTTTCATTGAAAACATGGAGAAGAGGATTCAGGGTGCCAGCCTATTACTAGATGCTAGCTTGGGACATTGTTTTGTAGATGGACTGGAACATCGAGATGCAAATGCAATCTACAATTGCTTACGTGCATATGCTGCAATAGATAACACTAGGAGTGCAGAAGAACTTTTTCGCACGACTATAGTAGCTCCATTGATACAAAAAATTATTCCCCATGGAACATCAGGGGCTGCTACAAGACCCTCTGGAGATGACCTTGAGAATGATTACAAGCAAATCAAGACATGTATTGAAAATGACTGCAAATTTTTGTTGGAAATTTCTTTCGAAGAGAATTCTGGTTTGCACGTGTTTGACTTCTTGGCAAATTCAATCCTCAAAGAGGTTCTCTCAGCAATCCAAAAGGGGAAACCCGGTGCTTTTTCTCCTGGAAGACCAACAGAATTTTTGAAAAATTACAAATCAAGCCTGAAGTTCTTGGCTCATCTAGAAGGCTATTGTCCATCCAGATCAGCTGTTTCCAAATTTCGAGCCGAAGCTGTTTATATTGACTTCATGAAGCAATGGAACCTTGGGGTTTATTTCTCTTTGAGGTTTCAGGAAATTGCAGGGGCTCTAGATTCTATACTTGTGGAGACTAGTCTTCTCCCTGTGCATAATGTACCTTCTGGTCAAGGAAATTCCCCAGATTTAACATTAAAACAAAGTGTCACTTTGTTAGAGTGCTTGGAATCCTGTTGGAGAGAAGATGTTATTGTTCTTTCTTGCGCTGATAAGTTTCTTCGCTTATCTTTGCAGCTTCTTTCAAGATATTCAAGTTGGCTGTCATCTGGACTGGCTGCTTGCAAGATGGGTCAAACCGGCTCCAAATCTGGTTCTGAATGGGCTACTTCAGCTGTTCCTGATGATTTTATATATATTATTCATGACACAGACCGGCTGTACAAGGTGGTTTGTGGTGACTTCCTCGGGCATGTACTTAAGCTTCTTTCTTCTTGTCCTGCCGATGTTCTTGATCTCGTAAAACAGAGCCTTTTACAAGGAGGAAAATCATTGAATGATTTAGTGCCTCAAGTTATCAACACAATTGTAGAGGCACTAGTTGAAAAATCTGCTGCGGAATTGGCACAGCTAAAGGGAATAACTGCAACGTACAGGATGACAAATAAGCCTCTTCCCGTCAGACATTCACCCTATGTGGCAGGAGTATCGCGTCCCTTGAGGGCCTTTTTGGAAGGAGAACGAGCTACAAAGTATCTTACAAGGGATGCTATCAACGAAGTGCTGCTCAATGCCGCAACTGAGATTACTGGTCGTTATTATGAGCAAGCTTCCAATGTCGTCAGCGTGCGGGCTAGGAAAACGGAGACTTCACTCCAGAGAATAAGGCAAGGTGCACAAAGACGAGGCGGAGCAAGTTCAGATGTTTCTGATCACAATGTGTCGGACACTGACAAGATATGCATGCAAATTTTCCTCGACATTCAGGAGTATGGCCGTAACCTTGCTGCCCTCGGTGTTGACGTTTCCAATATTGAGACATATCGTTCCTTGTGGGAATGTGTTGCTCCTCCAGAGAGGAAAATTGTGATTGATTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005795 GO:0005829 GO:0006810 GO:0006891 GO:0006996 GO:0007030 GO:0008104 GO:0008150 GO:0008565 GO:0009987 GO:0010256 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0016192 GO:0017119 GO:0031984 GO:0032991 GO:0033036 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0048193 GO:0051179 GO:0051234 GO:0071702 GO:0071705 GO:0071840 GO:0098791 GO:0099023

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG2 DUF3510

Protein Analysis

757

Amino Acids

84.1

Weight (kDa)

5.71

Isoelectric Point (pI)

41.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COG2_N	PF06148	25 - 99	1.4e-24	COG2 N-terminal
COG2_C	PF12022	410 - 718	3.4e-94	COG complex component, COG2, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24840
fragaria_vesca	FvH4_5g08050 FvH4_5g08050 FvH4_5g08050
malus_domestica	MD06G1143400.v1.1 MD14G1158600.v1.1
prunus_persica	Prupe.5G152600_v2.0.a1
pyrus_communis	pycom06g13310 pycom14g13230
rosa_chinensis	RchiOBHm_Chr7g0190411
rosa_laevigata	RLG00000004535
rosa_multiflora	Rmu_sc0014718.1_g000002 Rmu_sc0017751.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264650
rosa_rugosa	Rorug06G0504500 Rorug06G0504600
rosa_samantha	Rh7AG110300 Rh7BG112800 Rh7CG115100 Rh7DG113400
rosa_wichuraiana	Rw7G009570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	281
AatII	GACGTC	1 cut(s)	273
Acc36I	ACCTGC	1 cut(s)	675
AccB1I	GGYRCC	1 cut(s)	704
AccBSI	CCGCTC	2 cut(s)	58, 304
AccI	GTMKAC	2 cut(s)	267, 273
AccII	CGCG	3 cut(s)	38, 89, 1882
AclWI	GGATC	4 cut(s)	2, 15, 24, 162
AcoI	YGGCCR	2 cut(s)	399, 2164
AcuI	CTGAAG	2 cut(s)	1160, 1545
AcvI	CACGTG	1 cut(s)	1018
AcyI	GRCGYC	1 cut(s)	270
AdeI	CACNNNGTG	1 cut(s)	2110
AfaI	GTAC	5 cut(s)	125, 1332, 1613, 1647, 1823
AfiI	CCNNNNNNNGG	4 cut(s)	49, 103, 295, 1051
AflII	CTTAAG	1 cut(s)	1649
AflIII	ACRYGT	2 cut(s)	953, 1017
AhlI	ACTAGT	2 cut(s)	1307, 1768
AjnI	CCWGG	2 cut(s)	186, 1096
Alw21I	GWGCWC	4 cut(s)	177, 210, 426, 2068
Alw26I	GTCTC	5 cut(s)	222, 582, 1298, 2030, 2201
Alw44I	GTGCAC	1 cut(s)	2064
AlwI	GGATC	4 cut(s)	2, 15, 24, 162
AlwNI	CAGNNNCTG	1 cut(s)	899
Ama87I	CYCGRG	1 cut(s)	1637
AoxI	GGCC	7 cut(s)	189, 297, 363, 399, 405, 1893, 2164
ApaI	GGGCCC	1 cut(s)	301
ApaLI	GTGCAC	1 cut(s)	2064
ApeKI	GCWGC	9 cut(s)	17, 478, 803, 899, 1465, 1508, 1784, 1954, 2177
Asp700I	GAANNNNTTC	2 cut(s)	44, 837
AspLEI	GCGC	3 cut(s)	22, 91, 1439
AspS9I	GGNCC	4 cut(s)	52, 297, 298, 1893
AsuC2I	CCSGG	1 cut(s)	1083
AsuHPI	GGTGA	2 cut(s)	1640, 1851
AsuII	TTCGAA	1 cut(s)	996
AsuNHI	GCTAGC	1 cut(s)	725
AvaI	CYCGRG	1 cut(s)	1637
AvaII	GGWCC	1 cut(s)	52
BaeGI	GKGCMC	2 cut(s)	301, 2068
BamHI	GGATCC	1 cut(s)	7
BanI	GGYRCC	1 cut(s)	704
BanII	GRGCYC	5 cut(s)	177, 210, 301, 426, 1285
BarI	GAAGNNNNNNTAC	2 cut(s)	1638, 1670
BauI	CACGAG	2 cut(s)	203, 359
BbrPI	CACGTG	1 cut(s)	1018
BbsI	GAAGAC	2 cut(s)	1108, 1304
Bbv12I	GWGCWC	4 cut(s)	177, 210, 426, 2068
BbvCI	CCTCAGC	2 cut(s)	251, 314
BbvI	GCAGC	9 cut(s)	29, 465, 790, 886, 1477, 1495, 1771, 1941, 2164
BccI	CCATC	3 cut(s)	743, 1180, 1513
BceAI	ACGGC	2 cut(s)	266, 2151
BcgI	CGANNNNNNTGC	2 cut(s)	1860, 1894
BciT130I	CCWGG	2 cut(s)	188, 1098
BclI	TGATCA	1 cut(s)	2101
BcnI	CCSGG	1 cut(s)	1083
BcoDI	GTCTC	5 cut(s)	222, 582, 1298, 2030, 2201
BcuI	ACTAGT	2 cut(s)	1307, 1768
BfaI	CTAG	9 cut(s)	621, 719, 726, 819, 1157, 1286, 1308, 1769, 2025
BfmI	CTRYAG	1 cut(s)	849
BfoI	RGCGCY	1 cut(s)	23
BfrI	CTTAAG	1 cut(s)	1649
BfuAI	ACCTGC	1 cut(s)	675
Bme1390I	CCNGG	3 cut(s)	188, 1083, 1098
Bme18I	GGWCC	1 cut(s)	52
BmeT110I	CYCGRG	1 cut(s)	1637
BmgT120I	GGNCC	4 cut(s)	52, 297, 298, 1893
BmiI	GGNNCC	7 cut(s)	9, 54, 299, 300, 706, 1238, 1534
BmrFI	CCNGG	3 cut(s)	188, 1083, 1098
BmsI	GCATC	3 cut(s)	712, 757, 1927
BmtI	GCTAGC	1 cut(s)	729
BpiI	GAAGAC	2 cut(s)	1108, 1304
BplI	GAGNNNNNCTC	2 cut(s)	1043, 1075
BpmI	CTGGAG	3 cut(s)	936, 2030, 2226
Bpu10I	CCTNAGC	2 cut(s)	251, 314
Bpu14I	TTCGAA	1 cut(s)	996
BpuEI	CTTGAG	3 cut(s)	947, 1725, 1909
BpuMI	CCSGG	1 cut(s)	1083
BsaAI	YACGTR	2 cut(s)	794, 1018
BsaHI	GRCGYC	1 cut(s)	270
BsaJI	CCNNGG	5 cut(s)	402, 883, 1240, 1636, 2182
BsaXI	ACNNNNNCTCC	4 cut(s)	176, 206, 260, 290
Bsc4I	CCNNNNNNNGG	4 cut(s)	49, 103, 295, 1051
Bse118I	RCCGGY	4 cut(s)	490, 633, 1529, 1605
Bse1I	ACTGG	3 cut(s)	759, 1509, 1984
Bse3DI	GCAATG	2 cut(s)	550, 1238
BseBI	CCWGG	2 cut(s)	188, 1098
BseDI	CCNNGG	5 cut(s)	402, 883, 1240, 1636, 2182
BseGI	GGATG	3 cut(s)	1172, 1833, 1942
BseLI	CCNNNNNNNGG	4 cut(s)	49, 103, 295, 1051
BseMI	GCAATG	2 cut(s)	550, 1238
BseMII	CTCAG	7 cut(s)	265, 305, 357, 558, 598, 1074, 1962
BseNI	ACTGG	3 cut(s)	759, 1509, 1984
BseRI	GAGGAG	1 cut(s)	2229
BseSI	GKGCMC	2 cut(s)	301, 2068
BseX3I	CGGCCG	1 cut(s)	399
BseXI	GCAGC	9 cut(s)	29, 465, 790, 886, 1477, 1495, 1771, 1941, 2164
BsgI	GTGCAG	2 cut(s)	368, 846
Bsh1236I	CGCG	3 cut(s)	38, 89, 1882
Bsh1285I	CGRYCG	1 cut(s)	402
BshFI	GGCC	7 cut(s)	191, 299, 365, 401, 407, 1895, 2166
BshNI	GGYRCC	1 cut(s)	704
BsiEI	CGRYCG	1 cut(s)	402
BsiHKAI	GWGCWC	4 cut(s)	177, 210, 426, 2068
BsiHKCI	CYCGRG	1 cut(s)	1637
BsiSI	CCGG	6 cut(s)	104, 491, 634, 1083, 1530, 1606
BslFI	GGGAC	3 cut(s)	134, 747, 1869
BslI	CCNNNNNNNGG	4 cut(s)	49, 103, 295, 1051
BsmAI	GTCTC	5 cut(s)	222, 582, 1298, 2030, 2201
BsmFI	GGGAC	3 cut(s)	134, 747, 1869
BsnI	GGCC	7 cut(s)	191, 299, 365, 401, 407, 1895, 2166
BsoBI	CYCGRG	1 cut(s)	1637
Bsp119I	TTCGAA	1 cut(s)	996
Bsp120I	GGGCCC	1 cut(s)	297
Bsp1286I	GDGCHC	6 cut(s)	177, 210, 301, 426, 1285, 2068
Bsp1407I	TGTACA	2 cut(s)	123, 1611
Bsp143I	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
Bsp19I	CCATGG	1 cut(s)	883
BspANI	GGCC	7 cut(s)	191, 299, 365, 401, 407, 1895, 2166
BspCNI	CTCAG	7 cut(s)	264, 306, 356, 559, 597, 1073, 1963
BspFNI	CGCG	3 cut(s)	38, 89, 1882
BspHI	TCATGA	2 cut(s)	1224, 1594
BspLI	GGNNCC	7 cut(s)	9, 54, 299, 300, 706, 1238, 1534
BspMI	ACCTGC	1 cut(s)	675
BspOI	GCTAGC	1 cut(s)	729
BspPI	GGATC	4 cut(s)	2, 15, 24, 162
BspQI	GCTCTTC	1 cut(s)	98
BspT104I	TTCGAA	1 cut(s)	996
BspT107I	GGYRCC	1 cut(s)	704
BspTI	CTTAAG	1 cut(s)	1649
BsrBI	CCGCTC	2 cut(s)	58, 304
BsrDI	GCAATG	2 cut(s)	550, 1238
BsrFI	RCCGGY	4 cut(s)	490, 633, 1529, 1605
BsrGI	TGTACA	2 cut(s)	123, 1611
BsrI	ACTGG	3 cut(s)	759, 1509, 1984
BssAI	RCCGGY	4 cut(s)	490, 633, 1529, 1605
BssECI	CCNNGG	5 cut(s)	402, 883, 1240, 1636, 2182
BssMI	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
BssNI	GRCGYC	1 cut(s)	270
BssSI	CACGAG	2 cut(s)	203, 359
BssT1I	CCWWGG	2 cut(s)	883, 1240
Bst2BI	CACGAG	2 cut(s)	203, 359
Bst2UI	CCWGG	2 cut(s)	188, 1098
Bst6I	CTCTTC	5 cut(s)	50, 98, 686, 993, 1848
BstACI	GRCGYC	1 cut(s)	270
BstAFI	CTTAAG	1 cut(s)	1649
BstAPI	GCANNNNNTGC	1 cut(s)	803
BstAUI	TGTACA	2 cut(s)	123, 1611
BstBAI	YACGTR	2 cut(s)	794, 1018
BstBI	TTCGAA	1 cut(s)	996
BstDEI	CTNAG	8 cut(s)	251, 314, 343, 453, 567, 584, 1060, 1971
BstDSI	CCRYGG	1 cut(s)	883
BstENI	CCTNNNNNAGG	1 cut(s)	1049
BstF5I	GGATG	3 cut(s)	1172, 1833, 1942
BstFNI	CGCG	3 cut(s)	38, 89, 1882
BstH2I	RGCGCY	1 cut(s)	23
BstHHI	GCGC	3 cut(s)	22, 91, 1439
BstKTI	GATC	7 cut(s)	10, 32, 170, 327, 1181, 1687, 2104
BstMAI	GTCTC	5 cut(s)	222, 582, 1298, 2030, 2201
BstMBI	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
BstMCI	CGRYCG	1 cut(s)	402
BstMWI	GCNNNNNNNGC	8 cut(s)	301, 310, 355, 404, 487, 803, 1562, 1793
BstNI	CCWGG	2 cut(s)	188, 1098
BstNSI	RCATGY	6 cut(s)	295, 566, 604, 957, 1646, 2137
BstSCI	CCNGG	3 cut(s)	186, 1081, 1096
BstSFI	CTRYAG	1 cut(s)	849
BstSLI	GKGCMC	2 cut(s)	301, 2068
BstUI	CGCG	3 cut(s)	38, 89, 1882
BstV1I	GCAGC	9 cut(s)	29, 465, 790, 886, 1477, 1495, 1771, 1941, 2164
BstV2I	GAAGAC	2 cut(s)	1108, 1304
BstX2I	RGATCY	2 cut(s)	7, 29
BstYI	RGATCY	2 cut(s)	7, 29
BstZI	CGGCCG	1 cut(s)	399
BsuRI	GGCC	7 cut(s)	191, 299, 365, 401, 407, 1895, 2166
BtgI	CCRYGG	1 cut(s)	883
BtsCI	GGATG	3 cut(s)	1172, 1833, 1942
BtsIMutI	CAGTG	2 cut(s)	351, 2118
BveI	ACCTGC	1 cut(s)	675
CaiI	CAGNNNCTG	1 cut(s)	899
CciI	TCATGA	2 cut(s)	1224, 1594
CfoI	GCGC	3 cut(s)	22, 91, 1439
Cfr10I	RCCGGY	4 cut(s)	490, 633, 1529, 1605
Cfr13I	GGNCC	4 cut(s)	52, 297, 298, 1893
CseI	GACGC	1 cut(s)	1871
Csp6I	GTAC	5 cut(s)	124, 1331, 1612, 1646, 1822
CviQI	GTAC	5 cut(s)	124, 1331, 1612, 1646, 1822
DdeI	CTNAG	8 cut(s)	251, 314, 343, 453, 567, 584, 1060, 1971
DpnI	GATC	7 cut(s)	9, 31, 169, 326, 1180, 1686, 2103
DpnII	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
DraIII	CACNNNGTG	1 cut(s)	2110
DrdI	GACNNNNNNGTC	1 cut(s)	281
DseDI	GACNNNNNNGTC	1 cut(s)	281
EaeI	YGGCCR	2 cut(s)	399, 2164
EagI	CGGCCG	1 cut(s)	399
Eam1104I	CTCTTC	5 cut(s)	50, 98, 686, 993, 1848
EarI	CTCTTC	5 cut(s)	50, 98, 686, 993, 1848
EciI	GGCGGA	4 cut(s)	20, 22, 268, 2094
Ecl136II	GAGCTC	3 cut(s)	175, 208, 424
EclXI	CGGCCG	1 cut(s)	399
Eco130I	CCWWGG	2 cut(s)	883, 1240
Eco24I	GRGCYC	5 cut(s)	177, 210, 301, 426, 1285
Eco47I	GGWCC	1 cut(s)	52
Eco52I	CGGCCG	1 cut(s)	399
Eco53kI	GAGCTC	3 cut(s)	175, 208, 424
Eco57I	CTGAAG	2 cut(s)	1160, 1545
Eco72I	CACGTG	1 cut(s)	1018
Eco88I	CYCGRG	1 cut(s)	1637
EcoICRI	GAGCTC	3 cut(s)	175, 208, 424
EcoNI	CCTNNNNNAGG	1 cut(s)	1049
EcoO109I	RGGNCCY	2 cut(s)	298, 1893
EcoRI	GAATTC	2 cut(s)	532, 1003
EcoRII	CCWGG	2 cut(s)	186, 1096
EcoT14I	CCWWGG	2 cut(s)	883, 1240
EcoT22I	ATGCAT	1 cut(s)	2135
EcoT38I	GRGCYC	5 cut(s)	177, 210, 301, 426, 1285
ErhI	CCWWGG	2 cut(s)	883, 1240
FalI	AAGNNNNNCTT	2 cut(s)	1366, 1398
FaqI	GGGAC	3 cut(s)	134, 747, 1869
FauI	CCCGC	5 cut(s)	63, 94, 288, 309, 2013
FauNDI	CATATG	1 cut(s)	799
FbaI	TGATCA	1 cut(s)	2101
FblI	GTMKAC	2 cut(s)	267, 273
FokI	GGATG	3 cut(s)	1159, 1840, 1949
FriOI	GRGCYC	5 cut(s)	177, 210, 301, 426, 1285
FspBI	CTAG	9 cut(s)	621, 719, 726, 819, 1157, 1286, 1308, 1769, 2025
GlaI	GCGC	3 cut(s)	21, 90, 1438
GsuI	CTGGAG	3 cut(s)	936, 2030, 2226
HaeII	RGCGCY	1 cut(s)	23
HaeIII	GGCC	7 cut(s)	191, 299, 365, 401, 407, 1895, 2166
HapII	CCGG	6 cut(s)	104, 491, 634, 1083, 1530, 1606
HgaI	GACGC	1 cut(s)	1871
HhaI	GCGC	3 cut(s)	22, 91, 1439
Hin1I	GRCGYC	1 cut(s)	270
Hin6I	GCGC	3 cut(s)	20, 89, 1437
HinP1I	GCGC	3 cut(s)	20, 89, 1437
HincII	GTYRAC	4 cut(s)	247, 268, 274, 2191
HindII	GTYRAC	4 cut(s)	247, 268, 274, 2191
HindIII	AAGCTT	3 cut(s)	260, 1652, 1998
HinfI	GANTC	6 cut(s)	62, 113, 275, 697, 1289, 1400
HpaII	CCGG	6 cut(s)	104, 491, 634, 1083, 1530, 1606
HphI	GGTGA	2 cut(s)	1640, 1851
Hpy166II	GTNNAC	5 cut(s)	247, 268, 274, 2066, 2191
Hpy8I	GTNNAC	5 cut(s)	247, 268, 274, 2066, 2191
Hpy99I	CGWCG	4 cut(s)	272, 275, 287, 311
HpyAV	CCTTC	5 cut(s)	154, 163, 1154, 1344, 1898
HpyCH4IV	ACGT	6 cut(s)	270, 437, 793, 1017, 1820, 2193
HpyF10VI	GCNNNNNNNGC	8 cut(s)	301, 310, 355, 404, 487, 803, 1562, 1793
HpyF3I	CTNAG	8 cut(s)	251, 314, 343, 453, 567, 584, 1060, 1971
HpySE526I	ACGT	6 cut(s)	270, 437, 793, 1017, 1820, 2193
Hsp92I	GRCGYC	1 cut(s)	270
HspAI	GCGC	3 cut(s)	20, 89, 1437
KroI	GCCGGC	1 cut(s)	490
KroNI	GCCGGC	1 cut(s)	492
Ksp22I	TGATCA	1 cut(s)	2101
Kzo9I	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
LguI	GCTCTTC	1 cut(s)	98
LmnI	GCTCC	8 cut(s)	168, 180, 421, 429, 862, 1538, 2081, 2242
Lsp1109I	GCAGC	9 cut(s)	29, 465, 790, 886, 1477, 1495, 1771, 1941, 2164
LweI	GCATC	3 cut(s)	712, 757, 1927
MaeI	CTAG	9 cut(s)	621, 719, 726, 819, 1157, 1286, 1308, 1769, 2025
MaeII	ACGT	6 cut(s)	270, 437, 793, 1017, 1820, 2193
MaeIII	GTNAC	3 cut(s)	1378, 1628, 2168
MalI	GATC	7 cut(s)	9, 31, 169, 326, 1180, 1686, 2103
MbiI	CCGCTC	2 cut(s)	58, 304
MboI	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
MfeI	CAATTG	2 cut(s)	784, 1755
MflI	RGATCY	2 cut(s)	7, 29
MhlI	GDGCHC	6 cut(s)	177, 210, 301, 426, 1285, 2068
MlyI	GAGTC	2 cut(s)	56, 269
MmeI	TCCRAC	4 cut(s)	156, 963, 1388, 2094
Mph1103I	ATGCAT	1 cut(s)	2135
MroNI	GCCGGC	1 cut(s)	490
MroXI	GAANNNNTTC	2 cut(s)	44, 837
MseI	TTAA	3 cut(s)	1361, 1367, 1650
MslI	CAYNNNNRTG	1 cut(s)	765
MspA1I	CMGCKG	2 cut(s)	1184, 1565
MspCI	CTTAAG	1 cut(s)	1649
MspI	CCGG	6 cut(s)	104, 491, 634, 1083, 1530, 1606
MspR9I	CCNGG	3 cut(s)	188, 1083, 1098
MunI	CAATTG	2 cut(s)	784, 1755
MvaI	CCWGG	2 cut(s)	188, 1098
MvnI	CGCG	3 cut(s)	38, 89, 1882
MwoI	GCNNNNNNNGC	8 cut(s)	301, 310, 355, 404, 487, 803, 1562, 1793
NaeI	GCCGGC	1 cut(s)	492
NciI	CCSGG	1 cut(s)	1083
NcoI	CCATGG	1 cut(s)	883
NdeI	CATATG	1 cut(s)	799
NdeII	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
NgoMIV	GCCGGC	1 cut(s)	490
NheI	GCTAGC	1 cut(s)	725
NlaIV	GGNNCC	7 cut(s)	9, 54, 299, 300, 706, 1238, 1534
NmeAIII	GCCGAG	2 cut(s)	427, 507
NmuCI	GTSAC	2 cut(s)	1378, 1628
NsiI	ATGCAT	1 cut(s)	2135
NspI	RCATGY	6 cut(s)	295, 566, 604, 957, 1646, 2137
NspV	TTCGAA	1 cut(s)	996
PaeI	GCATGC	3 cut(s)	295, 604, 2137
PagI	TCATGA	2 cut(s)	1224, 1594
PciI	ACATGT	1 cut(s)	953
PciSI	GCTCTTC	1 cut(s)	98
PcsI	WCGNNNNNNNCGW	5 cut(s)	153, 210, 240, 279, 2190
PdiI	GCCGGC	1 cut(s)	492
PdmI	GAANNNNTTC	2 cut(s)	44, 837
PfeI	GAWTC	4 cut(s)	113, 697, 1289, 1400
PflFI	GACNNNGTC	1 cut(s)	242
PfoI	TCCNGGA	1 cut(s)	1096
PleI	GAGTC	2 cut(s)	56, 269
PmaCI	CACGTG	1 cut(s)	1018
PmlI	CACGTG	1 cut(s)	1018
PpsI	GAGTC	2 cut(s)	56, 269
Ppu21I	YACGTR	2 cut(s)	794, 1018
PscI	ACATGT	1 cut(s)	953
Psp124BI	GAGCTC	3 cut(s)	177, 210, 426
Psp6I	CCWGG	2 cut(s)	186, 1096
PspCI	CACGTG	1 cut(s)	1018
PspGI	CCWGG	2 cut(s)	186, 1096
PspN4I	GGNNCC	7 cut(s)	9, 54, 299, 300, 706, 1238, 1534
PspOMI	GGGCCC	1 cut(s)	297
PspPI	GGNCC	4 cut(s)	52, 297, 298, 1893
PstNI	CAGNNNCTG	1 cut(s)	899
PsuI	RGATCY	2 cut(s)	7, 29
PsyI	GACNNNGTC	1 cut(s)	242
PvuII	CAGCTG	2 cut(s)	1184, 1565
RsaI	GTAC	5 cut(s)	125, 1332, 1613, 1647, 1823
RsaNI	GTAC	5 cut(s)	124, 1331, 1612, 1646, 1822
RseI	CAYNNNNRTG	1 cut(s)	765
SacI	GAGCTC	3 cut(s)	177, 210, 426
SalI	GTCGAC	2 cut(s)	266, 272
SapI	GCTCTTC	1 cut(s)	98
SaqAI	TTAA	3 cut(s)	1361, 1367, 1650
Sau3AI	GATC	7 cut(s)	7, 29, 167, 324, 1178, 1684, 2101
Sau96I	GGNCC	4 cut(s)	52, 297, 298, 1893
SchI	GAGTC	2 cut(s)	56, 269
ScrFI	CCNGG	3 cut(s)	188, 1083, 1098
SduI	GDGCHC	6 cut(s)	177, 210, 301, 426, 1285, 2068
SfaNI	GCATC	3 cut(s)	712, 757, 1927
SfcI	CTRYAG	1 cut(s)	849
SfuI	TTCGAA	1 cut(s)	996
SinI	GGWCC	1 cut(s)	52
SmiMI	CAYNNNNRTG	1 cut(s)	765
SmlI	CTYRAG	4 cut(s)	926, 1649, 1740, 1888
SmoI	CTYRAG	4 cut(s)	926, 1649, 1740, 1888
SpeI	ACTAGT	2 cut(s)	1307, 1768
SphI	GCATGC	3 cut(s)	295, 604, 2137
SspI	AATATT	1 cut(s)	2203
SspMI	CTAG	9 cut(s)	621, 719, 726, 819, 1157, 1286, 1308, 1769, 2025
SstI	GAGCTC	3 cut(s)	177, 210, 426
StyD4I	CCNGG	3 cut(s)	186, 1081, 1096
StyI	CCWWGG	2 cut(s)	883, 1240
TaiI	ACGT	6 cut(s)	273, 440, 796, 1020, 1823, 2196
TatI	WGTACW	3 cut(s)	123, 1611, 1645
TauI	GCSGC	4 cut(s)	25, 38, 401, 1967
TfiI	GAWTC	4 cut(s)	113, 697, 1289, 1400
Tru1I	TTAA	3 cut(s)	1361, 1367, 1650
Tru9I	TTAA	3 cut(s)	1361, 1367, 1650
TscAI	CASTG	2 cut(s)	351, 2125
TseFI	GTSAC	2 cut(s)	1378, 1628
TseI	GCWGC	9 cut(s)	17, 478, 803, 899, 1465, 1508, 1784, 1954, 2177
Tsp45I	GTSAC	2 cut(s)	1378, 1628
TspDTI	ATGAA	6 cut(s)	431, 644, 664, 1213, 1241, 1583
TspGWI	ACGGA	3 cut(s)	390, 522, 2048
TspRI	CASTG	2 cut(s)	351, 2125
Tth111I	GACNNNGTC	1 cut(s)	242
Vha464I	CTTAAG	1 cut(s)	1649
VneI	GTGCAC	1 cut(s)	2064
VpaK11BI	GGWCC	1 cut(s)	52
XagI	CCTNNNNNAGG	1 cut(s)	1049
XbaI	TCTAGA	2 cut(s)	1156, 1285
XceI	RCATGY	6 cut(s)	295, 566, 604, 957, 1646, 2137
XcmI	CCANNNNNNNNNTGG	1 cut(s)	415
XmiI	GTMKAC	2 cut(s)	267, 273
XmnI	GAANNNNTTC	2 cut(s)	44, 837
XspI	CTAG	9 cut(s)	621, 719, 726, 819, 1157, 1286, 1308, 1769, 2025
ZraI	GACGTC	1 cut(s)	271
Zsp2I	ATGCAT	1 cut(s)	2135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.