pycom15g01140

zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0012409
Physical Location & Seq
Reverse (-)
607318 .. 609874
2557 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1296 bp
ATGGCTCTCTTCACTTTTGCACCAGAGGCCACAGAGCCCAAGAAGAAGGCAAGGCCACCACCAAACCGCAGGCAAAAGCAGCCGTCTTCCAACAATAAAAAGCAACAAAAACCACCACCACGGTCCTCCTCCTCCTCATGGGACCACATCAAGAACCTCCTGACCTGCAAACAGATCGAAGGGTCGAGAGTACACGACCCATCGAAAAATAATATTGTCGGTGGCGCTGCAGCCGGCCAAAGTGGAGGCTACTCGAAGCTGGGGTCGTCCTGCAGCTCCATATGCAGCTTCAGAGATGTCGCTCATGGCAACACTAGGGTCGTTCACAGAGCTGACAACTCGTCGCCCGAGAGTAGCACGCTGGGTCAGGAAACCGGGTTGCTGTCTAGGAAACCTGCGACTCGGTCAGCTAGATCCAACGGTTCTGGTTCCTTCGCTGCTTATCATACGTCATCATCGTCCAGAGGAATGCAATTCCGGAAGCTCTCTGGGTGTTACGAGTGCCACATGATCGTTGACCCTAGCAGGTGCCCAGTTCCTAGGTCTACTATTTGTGCTTGCTCTCAGTGTGGAGAGATCTTCCCAAAGATGGAGAGTTTGGAGCATCACCAAGCAATTCGCCATGCTGTATCGGAGCTGGGGGTCGAAGACTCCGGCCGAAACATCGTGGAAATAATCTTCAAATCCAGCTGGCTCAAGAAAGACATCCCGTTCTGCAAGATCGAGCGGATACTAAAGGTTCAAAACACGCAGCGCACGATCCAACGGTTCGAAGACTGCAGAGACGCAGTGAAGAACCGTGCGCTGAGCAGCACGCGGAAGGACCCCAGGTGCGCGGCAGACGGGAACGAGCTGCTGCGGTTCCACTGCGCCAGCATCTCGTGCACGCTCGGCGCACGTGGCTCGTCCAGCCTTTGTGGCTCCGTACCGGGCTGTGGAGTGTGCACGGTCATCCGTCACGGTTTTCAAGGCAAAGCCGTGGCGGGAGGTGATCAAGGTGGGAGCAAGGGAGTGCGGACAACCGCCAGCAGCGGTAGGGCCCATGATTCGTTGAATTGTACGGACGGGCGCAGGGCAATGCTGGTGTGCCGTGTCATTGCTGGCAGGGTGCGGCGCATTGCAGACGGTGGGCCGCCGGAGGAGGATGGCTTGTCCCAACTGTCGGCAGCTGCTGGCTCTTACGATTCTGTAGCCGGATTCGCCGGAATCTATTCCAATCTCGAGGAACTTCTTGTTTATAATCCGAGGGCCATCCTCCCATGTTTCGTGGTCATTTACAAGGCTATAGAGTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

432

Amino Acids

46.35

Weight (kDa)

9.47

Isoelectric Point (pI)

60.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75710
fragaria_vesca FvH4_2g38560
malus_domestica MD08G1013600.v1.1 MD15G1013200.v1.1
prunus_persica Prupe.1G366300_v2.0.a1
pyrus_communis pycom08g01220 pycom15g01140
rosa_chinensis RchiOBHm_Chr6g0302741
rosa_laevigata RLG00000011142
rosa_multiflora Rmu_sc0009897.1_g000007 Rmu_sc0017617.1_g000001 Rmu_ssc0000460.1_g000001
rosa_roxburghii Rroxscaffold_7G00165360
rosa_rugosa Rorug06G0316700
rosa_samantha Rh6AG430000 Rh6BG472500 Rh6CG442500 Rh6DG429200
rosa_wichuraiana Rw6G037240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1239
AarI CACCTGC 1 cut(s) 516
Acc36I ACCTGC 3 cut(s) 173, 403, 516
AccB1I GGYRCC 1 cut(s) 528
AccBSI CCGCTC 1 cut(s) 727
AccI GTMKAC 1 cut(s) 545
AccII CGCG 2 cut(s) 817, 836
AccIII TCCGGA 1 cut(s) 477
AclWI GGATC 2 cut(s) 408, 754
AcoI YGGCCR 2 cut(s) 235, 655
AcuI CTGAAG 1 cut(s) 274
AcvI CACGTG 1 cut(s) 899
AfaI GTAC 3 cut(s) 192, 927, 1060
AfiI CCNNNNNNNGG 4 cut(s) 138, 589, 935, 1162
AgsI TTSAA 4 cut(s) 682, 743, 968, 1054
AhdI GACNNNNNGTC 1 cut(s) 340
AjnI CCWGG 1 cut(s) 827
Alw21I GWGCWC 2 cut(s) 887, 947
Alw26I GTCTC 1 cut(s) 777
Alw44I GTGCAC 2 cut(s) 883, 943
AlwI GGATC 2 cut(s) 408, 754
AlwNI CAGNNNCTG 1 cut(s) 1172
Ama87I CYCGRG 2 cut(s) 347, 1220
Aor13HI TCCGGA 1 cut(s) 477
AoxI GGCC 7 cut(s) 27, 53, 235, 655, 1038, 1130, 1248
ApaI GGGCCC 1 cut(s) 1042
ApaLI GTGCAC 2 cut(s) 883, 943
ArsI GACNNNNNNTTYG 2 cut(s) 248, 280
Asp700I GAANNNNTTC 1 cut(s) 1210
AspA2I CCTAGG 1 cut(s) 539
AspLEI GCGC 8 cut(s) 227, 756, 805, 836, 872, 896, 1071, 1116
AspS9I GGNCC 7 cut(s) 123, 142, 823, 1038, 1039, 1130, 1248
AsuC2I CCSGG 2 cut(s) 376, 930
AsuHPI GGTGA 2 cut(s) 599, 1001
AsuII TTCGAA 1 cut(s) 771
AvaI CYCGRG 2 cut(s) 347, 1220
AvaII GGWCC 3 cut(s) 123, 142, 823
AvrII CCTAGG 1 cut(s) 539
BaeGI GKGCMC 4 cut(s) 533, 887, 947, 1042
BanI GGYRCC 1 cut(s) 528
BanII GRGCYC 2 cut(s) 39, 1042
BauI CACGAG 1 cut(s) 880
BbrPI CACGTG 1 cut(s) 899
BbsI GAAGAC 3 cut(s) 78, 654, 780
Bbv12I GWGCWC 2 cut(s) 887, 947
BccI CCATC 4 cut(s) 208, 583, 1139, 1259
BceAI ACGGC 3 cut(s) 67, 962, 1074
BcgI CGANNNNNNTGC 4 cut(s) 157, 191, 885, 919
BciT130I CCWGG 1 cut(s) 829
BciVI GTATCC 1 cut(s) 723
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 2 cut(s) 376, 930
BcoDI GTCTC 1 cut(s) 777
BfaI CTAG 5 cut(s) 315, 387, 411, 522, 540
BfmI CTRYAG 5 cut(s) 228, 271, 778, 1188, 1284
BfoI RGCGCY 1 cut(s) 228
BfuAI ACCTGC 3 cut(s) 173, 403, 516
BfuI GTATCC 1 cut(s) 723
BglI GCCNNNNNGGC 1 cut(s) 918
BglII AGATCT 1 cut(s) 576
BlnI CCTAGG 1 cut(s) 539
BlpI GCTNAGC 1 cut(s) 806
Bme1390I CCNGG 3 cut(s) 376, 829, 930
Bme18I GGWCC 3 cut(s) 123, 142, 823
BmeRI GACNNNNNGTC 1 cut(s) 340
BmeT110I CYCGRG 2 cut(s) 347, 1220
BmgT120I GGNCC 7 cut(s) 123, 142, 823, 1038, 1039, 1130, 1248
BmiI GGNNCC 7 cut(s) 143, 430, 530, 825, 863, 922, 1040
BmrFI CCNGG 3 cut(s) 376, 829, 930
BmrI ACTGGG 1 cut(s) 527
BmsI GCATC 2 cut(s) 613, 885
BmuI ACTGGG 1 cut(s) 527
BpiI GAAGAC 3 cut(s) 78, 654, 780
Bpu1102I GCTNAGC 1 cut(s) 806
Bpu14I TTCGAA 1 cut(s) 771
BpuEI CTTGAG 1 cut(s) 680
BpuMI CCSGG 2 cut(s) 376, 930
BsaAI YACGTR 1 cut(s) 899
BsaJI CCNNGG 5 cut(s) 119, 539, 827, 978, 1244
BsaWI WCCGGW 1 cut(s) 477
Bsc4I CCNNNNNNNGG 4 cut(s) 138, 589, 935, 1162
Bse118I RCCGGY 1 cut(s) 233
Bse1I ACTGG 1 cut(s) 533
Bse3DI GCAATG 3 cut(s) 1083, 1095, 1116
BseAI TCCGGA 1 cut(s) 477
BseBI CCWGG 1 cut(s) 829
BseDI CCNNGG 5 cut(s) 119, 539, 827, 978, 1244
BseGI GGATG 4 cut(s) 705, 951, 1150, 1251
BseLI CCNNNNNNNGG 4 cut(s) 138, 589, 935, 1162
BseMI GCAATG 3 cut(s) 1083, 1095, 1116
BseMII CTCAG 2 cut(s) 578, 797
BseNI ACTGG 1 cut(s) 533
BseRI GAGGAG 4 cut(s) 118, 121, 124, 1154
BseSI GKGCMC 4 cut(s) 533, 887, 947, 1042
BseX3I CGGCCG 1 cut(s) 655
BseYI CCCAGC 3 cut(s) 259, 361, 637
Bsh1236I CGCG 2 cut(s) 817, 836
Bsh1285I CGRYCG 1 cut(s) 658
BshFI GGCC 7 cut(s) 29, 55, 237, 657, 1040, 1132, 1250
BshNI GGYRCC 1 cut(s) 528
BsiEI CGRYCG 1 cut(s) 658
BsiHKAI GWGCWC 2 cut(s) 887, 947
BsiHKCI CYCGRG 2 cut(s) 347, 1220
BsiSI CCGG 8 cut(s) 234, 375, 478, 654, 929, 1136, 1194, 1203
BslFI GGGAC 2 cut(s) 155, 1138
BslI CCNNNNNNNGG 4 cut(s) 138, 589, 935, 1162
BsmAI GTCTC 1 cut(s) 777
BsmBI CGTCTC 1 cut(s) 777
BsmFI GGGAC 2 cut(s) 155, 1138
BsmI GAATGC 1 cut(s) 474
BsnI GGCC 7 cut(s) 29, 55, 237, 657, 1040, 1132, 1250
BsoBI CYCGRG 2 cut(s) 347, 1220
Bsp119I TTCGAA 1 cut(s) 771
Bsp120I GGGCCC 1 cut(s) 1038
Bsp1286I GDGCHC 5 cut(s) 39, 533, 887, 947, 1042
Bsp13I TCCGGA 1 cut(s) 477
Bsp143I GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
Bsp1720I GCTNAGC 1 cut(s) 806
BspANI GGCC 7 cut(s) 29, 55, 237, 657, 1040, 1132, 1250
BspCNI CTCAG 2 cut(s) 577, 798
BspEI TCCGGA 1 cut(s) 477
BspFNI CGCG 2 cut(s) 817, 836
BspLI GGNNCC 7 cut(s) 143, 430, 530, 825, 863, 922, 1040
BspMAI CTGCAG 3 cut(s) 232, 275, 782
BspMI ACCTGC 3 cut(s) 173, 403, 516
BspPI GGATC 2 cut(s) 408, 754
BspT104I TTCGAA 1 cut(s) 771
BspT107I GGYRCC 1 cut(s) 528
BsrBI CCGCTC 1 cut(s) 727
BsrDI GCAATG 3 cut(s) 1083, 1095, 1116
BsrFI RCCGGY 1 cut(s) 233
BsrI ACTGG 1 cut(s) 533
BssAI RCCGGY 1 cut(s) 233
BssECI CCNNGG 5 cut(s) 119, 539, 827, 978, 1244
BssMI GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
BssSI CACGAG 1 cut(s) 880
BssT1I CCWWGG 1 cut(s) 539
Bst2BI CACGAG 1 cut(s) 880
Bst2UI CCWGG 1 cut(s) 829
Bst4CI ACNGT 8 cut(s) 123, 422, 768, 800, 949, 962, 1127, 1161
Bst6I CTCTTC 1 cut(s) 14
BstAPI GCANNNNNTGC 1 cut(s) 882
BstBAI YACGTR 1 cut(s) 899
BstBI TTCGAA 1 cut(s) 771
BstDEI CTNAG 2 cut(s) 564, 806
BstDSI CCRYGG 2 cut(s) 119, 978
BstF5I GGATG 4 cut(s) 705, 951, 1150, 1251
BstFNI CGCG 2 cut(s) 817, 836
BstH2I RGCGCY 1 cut(s) 228
BstHHI GCGC 8 cut(s) 227, 756, 805, 836, 872, 896, 1071, 1116
BstKTI GATC 7 cut(s) 177, 416, 513, 579, 723, 762, 994
BstMAI GTCTC 1 cut(s) 777
BstMBI GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
BstMCI CGRYCG 1 cut(s) 658
BstMWI GCNNNNNNNGC 9 cut(s) 26, 79, 282, 882, 891, 900, 909, 918, 1199
BstNI CCWGG 1 cut(s) 829
BstSCI CCNGG 3 cut(s) 374, 827, 928
BstSFI CTRYAG 5 cut(s) 228, 271, 778, 1188, 1284
BstSLI GKGCMC 4 cut(s) 533, 887, 947, 1042
BstUI CGCG 2 cut(s) 817, 836
BstV2I GAAGAC 3 cut(s) 78, 654, 780
BstX2I RGATCY 2 cut(s) 413, 576
BstYI RGATCY 2 cut(s) 413, 576
BstZI CGGCCG 1 cut(s) 655
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 7 cut(s) 29, 55, 237, 657, 1040, 1132, 1250
BtgI CCRYGG 2 cut(s) 119, 978
BtsCI GGATG 4 cut(s) 705, 951, 1150, 1251
BtsI GCAGTG 2 cut(s) 795, 865
BtsIMutI CAGTG 3 cut(s) 572, 795, 865
BveI ACCTGC 3 cut(s) 173, 403, 516
CaiI CAGNNNCTG 1 cut(s) 1172
CfoI GCGC 8 cut(s) 227, 756, 805, 836, 872, 896, 1071, 1116
Cfr10I RCCGGY 1 cut(s) 233
Cfr13I GGNCC 7 cut(s) 123, 142, 823, 1038, 1039, 1130, 1248
CseI GACGC 1 cut(s) 794
Csp6I GTAC 3 cut(s) 191, 926, 1059
CviAII CATG 6 cut(s) 138, 305, 508, 623, 1043, 1260
CviQI GTAC 3 cut(s) 191, 926, 1059
DdeI CTNAG 2 cut(s) 564, 806
DpnI GATC 7 cut(s) 176, 415, 512, 578, 722, 761, 993
DpnII GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
DriI GACNNNNNGTC 1 cut(s) 340
EaeI YGGCCR 2 cut(s) 235, 655
EagI CGGCCG 1 cut(s) 655
Eam1104I CTCTTC 1 cut(s) 14
Eam1105I GACNNNNNGTC 1 cut(s) 340
EarI CTCTTC 1 cut(s) 14
EclXI CGGCCG 1 cut(s) 655
Eco130I CCWWGG 1 cut(s) 539
Eco24I GRGCYC 2 cut(s) 39, 1042
Eco47I GGWCC 3 cut(s) 123, 142, 823
Eco52I CGGCCG 1 cut(s) 655
Eco57I CTGAAG 1 cut(s) 274
Eco72I CACGTG 1 cut(s) 899
Eco88I CYCGRG 2 cut(s) 347, 1220
EcoO109I RGGNCCY 2 cut(s) 823, 1038
EcoRII CCWGG 1 cut(s) 827
EcoT14I CCWWGG 1 cut(s) 539
EcoT38I GRGCYC 2 cut(s) 39, 1042
ErhI CCWWGG 1 cut(s) 539
Esp3I CGTCTC 1 cut(s) 777
FaeI CATG 6 cut(s) 141, 308, 511, 626, 1046, 1263
FaqI GGGAC 2 cut(s) 155, 1138
FatI CATG 6 cut(s) 137, 304, 507, 622, 1042, 1259
FauI CCCGC 1 cut(s) 976
FauNDI CATATG 1 cut(s) 281
FbaI TGATCA 1 cut(s) 991
FblI GTMKAC 1 cut(s) 545
FokI GGATG 4 cut(s) 692, 938, 1157, 1238
FriOI GRGCYC 2 cut(s) 39, 1042
FspBI CTAG 5 cut(s) 315, 387, 411, 522, 540
GlaI GCGC 8 cut(s) 226, 755, 804, 835, 871, 895, 1070, 1115
GsaI CCCAGC 3 cut(s) 263, 365, 641
HaeII RGCGCY 1 cut(s) 228
HaeIII GGCC 7 cut(s) 29, 55, 237, 657, 1040, 1132, 1250
HapII CCGG 8 cut(s) 234, 375, 478, 654, 929, 1136, 1194, 1203
HgaI GACGC 1 cut(s) 794
HhaI GCGC 8 cut(s) 227, 756, 805, 836, 872, 896, 1071, 1116
Hin1II CATG 6 cut(s) 141, 308, 511, 626, 1046, 1263
Hin6I GCGC 8 cut(s) 225, 754, 803, 834, 870, 894, 1069, 1114
HinP1I GCGC 8 cut(s) 225, 754, 803, 834, 870, 894, 1069, 1114
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HinfI GANTC 7 cut(s) 400, 650, 1046, 1184, 1197, 1206, 1289
HpaII CCGG 8 cut(s) 234, 375, 478, 654, 929, 1136, 1194, 1203
HphI GGTGA 2 cut(s) 599, 1001
Hpy166II GTNNAC 6 cut(s) 193, 325, 517, 546, 885, 945
Hpy188I TCNGA 3 cut(s) 293, 634, 1245
Hpy188III TCNNGA 9 cut(s) 151, 160, 186, 368, 462, 478, 697, 1220, 1293
Hpy8I GTNNAC 6 cut(s) 193, 325, 517, 546, 885, 945
Hpy99I CGWCG 1 cut(s) 346
HpyAV CCTTC 4 cut(s) 40, 173, 442, 814
HpyCH4III ACNGT 8 cut(s) 123, 422, 768, 800, 949, 962, 1127, 1161
HpyCH4IV ACGT 2 cut(s) 449, 898
HpyF10VI GCNNNNNNNGC 9 cut(s) 26, 79, 282, 882, 891, 900, 909, 918, 1199
HpyF3I CTNAG 2 cut(s) 564, 806
HpySE526I ACGT 2 cut(s) 449, 898
Hsp92II CATG 6 cut(s) 141, 308, 511, 626, 1046, 1263
HspAI GCGC 8 cut(s) 225, 754, 803, 834, 870, 894, 1069, 1114
Kpn2I TCCGGA 1 cut(s) 477
KroI GCCGGC 1 cut(s) 233
KroNI GCCGGC 1 cut(s) 235
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
LmnI GCTCC 5 cut(s) 281, 601, 634, 926, 1002
LweI GCATC 2 cut(s) 613, 885
MaeI CTAG 5 cut(s) 315, 387, 411, 522, 540
MaeII ACGT 2 cut(s) 449, 898
MaeIII GTNAC 2 cut(s) 494, 956
MalI GATC 7 cut(s) 176, 415, 512, 578, 722, 761, 993
MbiI CCGCTC 1 cut(s) 727
MboI GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
MboII GAAGA 7 cut(s) 55, 78, 571, 659, 670, 785, 805
MflI RGATCY 2 cut(s) 413, 576
MhlI GDGCHC 5 cut(s) 39, 533, 887, 947, 1042
MluCI AATT 3 cut(s) 473, 615, 1054
MlyI GAGTC 2 cut(s) 394, 644
MmeI TCCRAC 3 cut(s) 114, 441, 787
MroI TCCGGA 1 cut(s) 477
MroNI GCCGGC 1 cut(s) 233
MroXI GAANNNNTTC 1 cut(s) 1210
MspA1I CMGCKG 3 cut(s) 690, 1032, 1169
MspI CCGG 8 cut(s) 234, 375, 478, 654, 929, 1136, 1194, 1203
MspR9I CCNGG 3 cut(s) 376, 829, 930
Mva1269I GAATGC 1 cut(s) 474
MvaI CCWGG 1 cut(s) 829
MvnI CGCG 2 cut(s) 817, 836
MwoI GCNNNNNNNGC 9 cut(s) 26, 79, 282, 882, 891, 900, 909, 918, 1199
NaeI GCCGGC 1 cut(s) 235
NciI CCSGG 2 cut(s) 376, 930
NdeI CATATG 1 cut(s) 281
NdeII GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
NgoMIV GCCGGC 1 cut(s) 233
NlaIII CATG 6 cut(s) 141, 308, 511, 626, 1046, 1263
NlaIV GGNNCC 7 cut(s) 143, 430, 530, 825, 863, 922, 1040
NmeAIII GCCGAG 1 cut(s) 870
NmuCI GTSAC 1 cut(s) 956
NspV TTCGAA 1 cut(s) 771
PaeR7I CTCGAG 1 cut(s) 1220
PaqCI CACCTGC 1 cut(s) 516
PcsI WCGNNNNNNNCGW 2 cut(s) 455, 755
PctI GAATGC 1 cut(s) 474
PdiI GCCGGC 1 cut(s) 235
PdmI GAANNNNTTC 1 cut(s) 1210
PfeI GAWTC 4 cut(s) 1046, 1184, 1197, 1206
PflFI GACNNNGTC 1 cut(s) 403
PleI GAGTC 2 cut(s) 394, 644
PmaCI CACGTG 1 cut(s) 899
PmlI CACGTG 1 cut(s) 899
PpsI GAGTC 2 cut(s) 394, 644
Ppu21I YACGTR 1 cut(s) 899
PpuMI RGGWCCY 1 cut(s) 823
PsiI TTATAA 1 cut(s) 1239
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 1 cut(s) 827
PspCI CACGTG 1 cut(s) 899
PspFI CCCAGC 3 cut(s) 259, 361, 637
PspGI CCWGG 1 cut(s) 827
PspN4I GGNNCC 7 cut(s) 143, 430, 530, 825, 863, 922, 1040
PspOMI GGGCCC 1 cut(s) 1038
PspPI GGNCC 7 cut(s) 123, 142, 823, 1038, 1039, 1130, 1248
PspPPI RGGWCCY 1 cut(s) 823
PstI CTGCAG 3 cut(s) 232, 275, 782
PstNI CAGNNNCTG 1 cut(s) 1172
PsuI RGATCY 2 cut(s) 413, 576
PsyI GACNNNGTC 1 cut(s) 403
PvuII CAGCTG 2 cut(s) 690, 1169
RsaI GTAC 3 cut(s) 192, 927, 1060
RsaNI GTAC 3 cut(s) 191, 926, 1059
Sau3AI GATC 7 cut(s) 174, 413, 510, 576, 720, 759, 991
Sau96I GGNCC 7 cut(s) 123, 142, 823, 1038, 1039, 1130, 1248
SchI GAGTC 2 cut(s) 394, 644
ScrFI CCNGG 3 cut(s) 376, 829, 930
SduI GDGCHC 5 cut(s) 39, 533, 887, 947, 1042
SfaNI GCATC 2 cut(s) 613, 885
SfcI CTRYAG 5 cut(s) 228, 271, 778, 1188, 1284
Sfr274I CTCGAG 1 cut(s) 1220
SfuI TTCGAA 1 cut(s) 771
SinI GGWCC 3 cut(s) 123, 142, 823
SlaI CTCGAG 1 cut(s) 1220
SmlI CTYRAG 2 cut(s) 695, 1220
SmoI CTYRAG 2 cut(s) 695, 1220
Sse9I AATT 3 cut(s) 473, 615, 1054
SspI AATATT 1 cut(s) 214
SspMI CTAG 5 cut(s) 315, 387, 411, 522, 540
StyD4I CCNGG 3 cut(s) 374, 827, 928
StyI CCWWGG 1 cut(s) 539
TaaI ACNGT 8 cut(s) 123, 422, 768, 800, 949, 962, 1127, 1161
TaiI ACGT 2 cut(s) 452, 901
TaqI TCGA 8 cut(s) 177, 185, 203, 254, 645, 723, 771, 1221
TaqII GACCGA 1 cut(s) 393
TasI AATT 3 cut(s) 473, 615, 1054
TatI WGTACW 1 cut(s) 190
TauI GCSGC 3 cut(s) 839, 1114, 1135
TfiI GAWTC 4 cut(s) 1046, 1184, 1197, 1206
TscAI CASTG 3 cut(s) 572, 795, 872
TseFI GTSAC 1 cut(s) 956
Tsp45I GTSAC 1 cut(s) 956
TspGWI ACGGA 3 cut(s) 913, 944, 1076
TspRI CASTG 3 cut(s) 572, 795, 872
Tth111I GACNNNGTC 1 cut(s) 403
VneI GTGCAC 2 cut(s) 883, 943
VpaK11BI GGWCC 3 cut(s) 123, 142, 823
XhoI CTCGAG 1 cut(s) 1220
XmaJI CCTAGG 1 cut(s) 539
XmiI GTMKAC 1 cut(s) 545
XmnI GAANNNNTTC 1 cut(s) 1210
XspI CTAG 5 cut(s) 315, 387, 411, 522, 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.