pycom15g03460
MYB Family

two-component response regulator

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
2128937 .. 2130742
1806 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1500 bp
ATGTTTCAATTGGGTCATGCACAGAATCCAAGCAACTCCATTAATGATCAGCCAGTCATGTTTCCTGGAAACCGTAGGGGAAATATGCTTCCGGCACACTTGGAACTTGATCAGCAACATAGTAGGGGTTCCGCCTATGACGCACCTATTTATCCCAATTCCAGTGGTTTTACAGATGGAAAAGTGATGAATAGGTCAAATGATCCTTTCAGTCTTACAGACGACACATTGTTAAGACATAATCAAGATTCTGAAGTCGGAAGAAATCATGTAATATTGCAGTCTTCTGTATCAATGACCTCCTTAAAACCAGAACTGTCGCCCTCGTTTCTGGATCACAGACGGTTGAATGACAACTGGCCAACCGCTGCTCAGTCATCTGCATTCCGGTCAAATTCTTTCTCAGCACACGACACTTTTAAACAACCTACTCTTCTTGTAAGTAACCTGAGGGACGATATGCCTATAATGTCCTCACAAATTGGGAGCTCTCAGATTGATGTTTCTTGTATAAATTCAATCTCCTGTCAATCACAGGATTCAAGAATAGAAATGCAGATCCCGGCATCTACAATGAGCAATAATTCTGGGCCAACAATTAACAATGACCTGTTTATGGGTTGGGATGAGCCGAAGCAGGATTCCCCTTTCCGCCCAGATGTCATGTGTAGCTCAATGAACAACTTGAGGCCTGTCAATGATAACGTAGCTCCTTTTGACCAAAATTTGGACGCTAGAAGCTCAGCCTTCCTAAGAAACAGCGACTTCAATTCGATTGGACAACCAAATTTTCTTGATGTCGAAATATCAACTATGGATGCACCATTGAAGTTGAAGCAGCAGGGGTACCTTATGGACCAACGGAAGCCACAGGGCGGTTATGTTCCCCACAATGCTGGTTCGTTGGATGAGTTAGTGAGCTCAATGATGAAACAGGTAAGGATACCTATACAGTGTCTTGATAACCGAATGAAATCATGCTGTTTGTTTACCTGTCACATATGTGTGCAGCTATTAGGAACGCTTCTTGCTCATCTAATTGCAATTAACATCCTAGTACCTTTGCGTAGTCGCTACATTGAACTGCAGAATTTGTTGCATTACGATTCTGGTATTTTTCGCAGGAAAGGAGATAAGGCGAAATCACCGGAAGGTTGGTTCAATCCCTGTGTAGTATACTCTTTGAGGTCGCGGCGCTGTTCTTCGTATTTGTCTTCGTATCTAATTAATCTCAAGTTTTGGCTTTGTTTAATCTGTATGATGAAGAGGCCTTGTCGTCCAGGCCCCGACAAATGTATTAAGGAAATTAGCATACTTTCTAATCCACACGCAGCAGTTTTATTTTCTTTATTTTCTTTGAGCTGTATAAAACCGACTGATATGCTAGTTCATAAAAAGAATAAGAATTATAATATTGTGAGTTTTTACCATTTTATTTATTTTATACGAAGAAAGTTTGGAGATAATGACAACATAGTTGATAGAGAGCAACTTATATAA

Protein Analysis

500

Amino Acids

56.49

Weight (kDa)

8.43

Isoelectric Point (pI)

65.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
Acc65I GGTACC 1 cut(s) 846
AccB1I GGYRCC 1 cut(s) 846
AccB7I CCANNNNNTGG 1 cut(s) 727
AccI GTMKAC 1 cut(s) 1176
AccII CGCG 1 cut(s) 1192
AciI CCGC 5 cut(s) 132, 366, 652, 876, 1192
AclWI GGATC 3 cut(s) 197, 342, 553
AcoI YGGCCR 1 cut(s) 359
AcsI RAATTY 5 cut(s) 394, 514, 724, 787, 1090
AcuI CTGAAG 1 cut(s) 273
AfaI GTAC 2 cut(s) 848, 1059
AfiI CCNNNNNNNGG 3 cut(s) 616, 727, 875
AgsI TTSAA 9 cut(s) 8, 349, 519, 543, 769, 829, 835, 1082, 1162
AjnI CCWGG 2 cut(s) 64, 1279
AleI CACNNNNGTG 1 cut(s) 1002
AloI GAACNNNNNNTCC 2 cut(s) 1142, 1174
AluBI AGCT 7 cut(s) 489, 672, 710, 741, 921, 1012, 1362
AluI AGCT 7 cut(s) 489, 672, 710, 741, 921, 1012, 1362
Alw21I GWGCWC 2 cut(s) 491, 923
AlwI GGATC 3 cut(s) 197, 342, 553
AoxI GGCC 5 cut(s) 359, 590, 689, 1268, 1282
ApeKI GCWGC 4 cut(s) 368, 838, 1009, 1331
ApoI RAATTY 5 cut(s) 394, 514, 724, 787, 1090
AseI ATTAAT 2 cut(s) 42, 1227
Asp718I GGTACC 1 cut(s) 846
AspLEI GCGC 1 cut(s) 1197
AspS9I GGNCC 3 cut(s) 590, 856, 1283
AsuC2I CCSGG 1 cut(s) 563
AsuHPI GGTGA 1 cut(s) 1137
AvaII GGWCC 1 cut(s) 856
AxyI CCTNAGG 1 cut(s) 449
BalI TGGCCA 1 cut(s) 361
BanI GGYRCC 1 cut(s) 846
BanII GRGCYC 2 cut(s) 491, 923
BbsI GAAGAC 2 cut(s) 276, 1206
Bbv12I GWGCWC 2 cut(s) 491, 923
BbvI GCAGC 4 cut(s) 355, 850, 1021, 1343
BccI CCATC 1 cut(s) 170
BcgI CGANNNNNNTGC 2 cut(s) 1363, 1397
BciT130I CCWGG 2 cut(s) 66, 1281
BciVI GTATCC 1 cut(s) 936
BclI TGATCA 2 cut(s) 46, 109
BcnI CCSGG 1 cut(s) 563
BfaI CTAG 3 cut(s) 735, 1055, 1385
BfmI CTRYAG 1 cut(s) 1085
BfoI RGCGCY 1 cut(s) 1198
BfuI GTATCC 1 cut(s) 936
BisI GCNGC 5 cut(s) 369, 839, 1010, 1193, 1332
BlpI GCTNAGC 1 cut(s) 742
BlsI GCNGC 5 cut(s) 370, 840, 1011, 1194, 1333
Bme1390I CCNGG 3 cut(s) 66, 563, 1281
Bme18I GGWCC 1 cut(s) 856
BmgT120I GGNCC 3 cut(s) 590, 856, 1283
BmiI GGNNCC 3 cut(s) 130, 848, 1285
BmrFI CCNGG 3 cut(s) 66, 563, 1281
BmsI GCATC 2 cut(s) 575, 808
BpiI GAAGAC 2 cut(s) 276, 1206
Bpu1102I GCTNAGC 1 cut(s) 742
BpuEI CTTGAG 2 cut(s) 706, 1217
BpuMI CCSGG 1 cut(s) 563
BsaWI WCCGGW 2 cut(s) 387, 1147
Bsc4I CCNNNNNNNGG 3 cut(s) 616, 727, 875
Bse1I ACTGG 3 cut(s) 53, 162, 362
Bse21I CCTNAGG 1 cut(s) 449
BseBI CCWGG 2 cut(s) 66, 1281
BseGI GGATG 4 cut(s) 631, 823, 913, 1050
BseLI CCNNNNNNNGG 3 cut(s) 616, 727, 875
BseMII CTCAG 5 cut(s) 386, 417, 440, 506, 756
BseNI ACTGG 3 cut(s) 53, 162, 362
BseXI GCAGC 4 cut(s) 355, 850, 1021, 1343
BsgI GTGCAG 1 cut(s) 1028
Bsh1236I CGCG 1 cut(s) 1192
BshFI GGCC 5 cut(s) 361, 592, 691, 1270, 1284
BshNI GGYRCC 1 cut(s) 846
BsiHKAI GWGCWC 2 cut(s) 491, 923
BsiSI CCGG 4 cut(s) 92, 388, 563, 1148
BslFI GGGAC 1 cut(s) 467
BslI CCNNNNNNNGG 3 cut(s) 616, 727, 875
BsmFI GGGAC 1 cut(s) 467
BsmI GAATGC 1 cut(s) 383
BsnI GGCC 5 cut(s) 361, 592, 691, 1270, 1284
Bsp1286I GDGCHC 2 cut(s) 491, 923
Bsp143I GATC 5 cut(s) 46, 109, 202, 334, 558
Bsp1720I GCTNAGC 1 cut(s) 742
BspACI CCGC 5 cut(s) 132, 366, 652, 876, 1192
BspANI GGCC 5 cut(s) 361, 592, 691, 1270, 1284
BspCNI CTCAG 5 cut(s) 385, 416, 441, 505, 755
BspFNI CGCG 1 cut(s) 1192
BspLI GGNNCC 3 cut(s) 130, 848, 1285
BspMAI CTGCAG 1 cut(s) 1089
BspPI GGATC 3 cut(s) 197, 342, 553
BspT107I GGYRCC 1 cut(s) 846
BsrI ACTGG 3 cut(s) 53, 162, 362
BssMI GATC 5 cut(s) 46, 109, 202, 334, 558
BssNAI GTATAC 1 cut(s) 1177
Bst1107I GTATAC 1 cut(s) 1177
Bst2UI CCWGG 2 cut(s) 66, 1281
Bst4CI ACNGT 4 cut(s) 74, 318, 345, 954
Bst6I CTCTTC 2 cut(s) 438, 1259
BstDEI CTNAG 6 cut(s) 372, 403, 449, 492, 742, 752
BstF5I GGATG 4 cut(s) 631, 823, 913, 1050
BstFNI CGCG 1 cut(s) 1192
BstH2I RGCGCY 1 cut(s) 1198
BstHHI GCGC 1 cut(s) 1197
BstKTI GATC 5 cut(s) 49, 112, 205, 337, 561
BstMBI GATC 5 cut(s) 46, 109, 202, 334, 558
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstNI CCWGG 2 cut(s) 66, 1281
BstSCI CCNGG 3 cut(s) 64, 561, 1279
BstSFI CTRYAG 1 cut(s) 1085
BstUI CGCG 1 cut(s) 1192
BstV1I GCAGC 4 cut(s) 355, 850, 1021, 1343
BstV2I GAAGAC 2 cut(s) 276, 1206
BstX2I RGATCY 1 cut(s) 558
BstXI CCANNNNNNTGG 1 cut(s) 896
BstYI RGATCY 1 cut(s) 558
BstZ17I GTATAC 1 cut(s) 1177
Bsu36I CCTNAGG 1 cut(s) 449
BsuI GTATCC 1 cut(s) 936
BsuRI GGCC 5 cut(s) 361, 592, 691, 1270, 1284
BtsCI GGATG 4 cut(s) 631, 823, 913, 1050
BtsIMutI CAGTG 2 cut(s) 169, 959
CfoI GCGC 1 cut(s) 1197
Cfr13I GGNCC 3 cut(s) 590, 856, 1283
CseI GACGC 2 cut(s) 149, 740
Csp6I GTAC 2 cut(s) 847, 1058
CspCI CAANNNNNGTGG 2 cut(s) 145, 180
CviAII CATG 5 cut(s) 17, 58, 269, 664, 978
CviQI GTAC 2 cut(s) 847, 1058
DdeI CTNAG 6 cut(s) 372, 403, 449, 492, 742, 752
DpnI GATC 5 cut(s) 48, 111, 204, 336, 560
DpnII GATC 5 cut(s) 46, 109, 202, 334, 558
DraI TTTAAA 1 cut(s) 421
EaeI YGGCCR 1 cut(s) 359
Eam1104I CTCTTC 2 cut(s) 438, 1259
EarI CTCTTC 2 cut(s) 438, 1259
EciI GGCGGA 2 cut(s) 121, 641
Ecl136II GAGCTC 2 cut(s) 489, 921
Eco147I AGGCCT 2 cut(s) 691, 1270
Eco24I GRGCYC 2 cut(s) 491, 923
Eco47I GGWCC 1 cut(s) 856
Eco53kI GAGCTC 2 cut(s) 489, 921
Eco57I CTGAAG 1 cut(s) 273
Eco81I CCTNAGG 1 cut(s) 449
EcoICRI GAGCTC 2 cut(s) 489, 921
EcoO109I RGGNCCY 1 cut(s) 1283
EcoRII CCWGG 2 cut(s) 64, 1279
EcoT38I GRGCYC 2 cut(s) 491, 923
FaeI CATG 5 cut(s) 20, 61, 272, 667, 981
FaqI GGGAC 1 cut(s) 467
FatI CATG 5 cut(s) 16, 57, 268, 663, 977
FauNDI CATATG 1 cut(s) 1001
FbaI TGATCA 2 cut(s) 46, 109
FblI GTMKAC 1 cut(s) 1176
Fnu4HI GCNGC 5 cut(s) 369, 839, 1010, 1193, 1332
FokI GGATG 4 cut(s) 638, 830, 920, 1037
FriOI GRGCYC 2 cut(s) 491, 923
Fsp4HI GCNGC 5 cut(s) 369, 839, 1010, 1193, 1332
FspBI CTAG 3 cut(s) 735, 1055, 1385
GlaI GCGC 1 cut(s) 1196
GluI GCNGC 5 cut(s) 369, 839, 1010, 1193, 1332
HaeII RGCGCY 1 cut(s) 1198
HaeIII GGCC 5 cut(s) 361, 592, 691, 1270, 1284
HapII CCGG 4 cut(s) 92, 388, 563, 1148
HgaI GACGC 2 cut(s) 149, 740
HhaI GCGC 1 cut(s) 1197
Hin1II CATG 5 cut(s) 20, 61, 272, 667, 981
Hin6I GCGC 1 cut(s) 1195
HinP1I GCGC 1 cut(s) 1195
HinfI GANTC 5 cut(s) 25, 248, 539, 641, 1106
HpaII CCGG 4 cut(s) 92, 388, 563, 1148
HphI GGTGA 1 cut(s) 1137
Hpy166II GTNNAC 2 cut(s) 990, 1177
Hpy188I TCNGA 3 cut(s) 253, 260, 495
Hpy188III TCNNGA 5 cut(s) 245, 332, 543, 794, 959
Hpy8I GTNNAC 2 cut(s) 990, 1177
HpyAV CCTTC 2 cut(s) 757, 1145
HpyCH4III ACNGT 4 cut(s) 74, 318, 345, 954
HpyCH4IV ACGT 1 cut(s) 705
HpyCH4V TGCA 9 cut(s) 20, 280, 383, 556, 821, 1009, 1043, 1087, 1099
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpyF3I CTNAG 6 cut(s) 372, 403, 449, 492, 742, 752
HpySE526I ACGT 1 cut(s) 705
Hsp92II CATG 5 cut(s) 20, 61, 272, 667, 981
HspAI GCGC 1 cut(s) 1195
KpnI GGTACC 1 cut(s) 850
Ksp22I TGATCA 2 cut(s) 46, 109
Kzo9I GATC 5 cut(s) 46, 109, 202, 334, 558
LmnI GCTCC 2 cut(s) 486, 715
Lsp1109I GCAGC 4 cut(s) 355, 850, 1021, 1343
LweI GCATC 2 cut(s) 575, 808
MaeI CTAG 3 cut(s) 735, 1055, 1385
MaeII ACGT 1 cut(s) 705
MaeIII GTNAC 2 cut(s) 443, 995
MalI GATC 5 cut(s) 48, 111, 204, 336, 560
MboI GATC 5 cut(s) 46, 109, 202, 334, 558
MboII GAAGA 7 cut(s) 273, 276, 425, 1194, 1206, 1276, 1461
MfeI CAATTG 1 cut(s) 8
MflI RGATCY 1 cut(s) 558
MhlI GDGCHC 2 cut(s) 491, 923
MlsI TGGCCA 1 cut(s) 361
MluNI TGGCCA 1 cut(s) 361
MmeI TCCRAC 2 cut(s) 238, 885
MnlI CCTC 7 cut(s) 310, 334, 444, 484, 681, 1179, 1260
Mox20I TGGCCA 1 cut(s) 361
MscI TGGCCA 1 cut(s) 361
MseI TTAA 9 cut(s) 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299
MslI CAYNNNNRTG 2 cut(s) 1002, 1004
Msp20I TGGCCA 1 cut(s) 361
MspA1I CMGCKG 1 cut(s) 368
MspI CCGG 4 cut(s) 92, 388, 563, 1148
MspR9I CCNGG 3 cut(s) 66, 563, 1281
MunI CAATTG 1 cut(s) 8
Mva1269I GAATGC 1 cut(s) 383
MvaI CCWGG 2 cut(s) 66, 1281
MvnI CGCG 1 cut(s) 1192
MwoI GCNNNNNNNGC 1 cut(s) 140
NciI CCSGG 1 cut(s) 563
NdeI CATATG 1 cut(s) 1001
NdeII GATC 5 cut(s) 46, 109, 202, 334, 558
NlaIII CATG 5 cut(s) 20, 61, 272, 667, 981
NlaIV GGNNCC 3 cut(s) 130, 848, 1285
NmuCI GTSAC 1 cut(s) 995
OliI CACNNNNGTG 1 cut(s) 1002
PceI AGGCCT 2 cut(s) 691, 1270
PctI GAATGC 1 cut(s) 383
PfeI GAWTC 5 cut(s) 25, 248, 539, 641, 1106
PflMI CCANNNNNTGG 1 cut(s) 727
PfoI TCCNGGA 1 cut(s) 64
PkrI GCNGC 5 cut(s) 370, 840, 1011, 1194, 1333
PshBI ATTAAT 2 cut(s) 42, 1227
PsiI TTATAA 1 cut(s) 1410
Psp124BI GAGCTC 2 cut(s) 491, 923
Psp6I CCWGG 2 cut(s) 64, 1279
PspGI CCWGG 2 cut(s) 64, 1279
PspN4I GGNNCC 3 cut(s) 130, 848, 1285
PspPI GGNCC 3 cut(s) 590, 856, 1283
PstI CTGCAG 1 cut(s) 1089
PsuI RGATCY 1 cut(s) 558
RsaI GTAC 2 cut(s) 848, 1059
RsaNI GTAC 2 cut(s) 847, 1058
RseI CAYNNNNRTG 2 cut(s) 1002, 1004
SacI GAGCTC 2 cut(s) 491, 923
SaqAI TTAA 9 cut(s) 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299
SatI GCNGC 5 cut(s) 369, 839, 1010, 1193, 1332
Sau3AI GATC 5 cut(s) 46, 109, 202, 334, 558
Sau96I GGNCC 3 cut(s) 590, 856, 1283
ScrFI CCNGG 3 cut(s) 66, 563, 1281
SduI GDGCHC 2 cut(s) 491, 923
SfaNI GCATC 2 cut(s) 575, 808
SfcI CTRYAG 1 cut(s) 1085
SinI GGWCC 1 cut(s) 856
SmiMI CAYNNNNRTG 2 cut(s) 1002, 1004
SmlI CTYRAG 2 cut(s) 685, 1232
SmoI CTYRAG 2 cut(s) 685, 1232
SseBI AGGCCT 2 cut(s) 691, 1270
SsiI CCGC 5 cut(s) 132, 366, 652, 876, 1192
SspI AATATT 2 cut(s) 276, 1414
SspMI CTAG 3 cut(s) 735, 1055, 1385
SstI GAGCTC 2 cut(s) 491, 923
StuI AGGCCT 2 cut(s) 691, 1270
StyD4I CCNGG 3 cut(s) 64, 561, 1279
TaaI ACNGT 4 cut(s) 74, 318, 345, 954
TaiI ACGT 1 cut(s) 708
TaqI TCGA 2 cut(s) 773, 801
TauI GCSGC 1 cut(s) 1195
TfiI GAWTC 5 cut(s) 25, 248, 539, 641, 1106
Tru1I TTAA 9 cut(s) 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299
Tru9I TTAA 9 cut(s) 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299
TscAI CASTG 2 cut(s) 169, 959
TseFI GTSAC 1 cut(s) 995
TseI GCWGC 4 cut(s) 368, 838, 1009, 1331
Tsp45I GTSAC 1 cut(s) 995
TspDTI ATGAA 6 cut(s) 203, 692, 944, 986, 1277, 1379
TspGWI ACGGA 1 cut(s) 877
TspRI CASTG 2 cut(s) 169, 959
Van91I CCANNNNNTGG 1 cut(s) 727
VpaK11BI GGWCC 1 cut(s) 856
VspI ATTAAT 2 cut(s) 42, 1227
XapI RAATTY 5 cut(s) 394, 514, 724, 787, 1090
XmiI GTMKAC 1 cut(s) 1176
XspI CTAG 3 cut(s) 735, 1055, 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.