two-component response regulator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25180 AT4G31920 |
| fragaria_vesca | FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 FvH4_2g40890 |
| malus_domestica | MD08G1059000.v1.1 MD15G1037400.v1.1 |
| prunus_persica | Prupe.1G391400_v2.0.a1 Prupe.1G391400_v2.0.a1 |
| pyrus_communis | pycom08g04890 pycom15g03450 pycom15g03460 |
| rosa_chinensis | RchiOBHm_Chr6g0299681 |
| rosa_laevigata | RLG00000011397 |
| rosa_multiflora | Rmu_co8516769.1_g000001 Rmu_sc0002895.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00168450 |
| rosa_rugosa | Rorug06G0291500 |
| rosa_samantha | Rh6AG402300 Rh6BG410800 Rh6CG416600 Rh6DG403700 |
| rosa_wichuraiana | Rw6G035220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1410 |
| Acc65I | GGTACC | 1 cut(s) | 846 |
| AccB1I | GGYRCC | 1 cut(s) | 846 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 727 |
| AccI | GTMKAC | 1 cut(s) | 1176 |
| AccII | CGCG | 1 cut(s) | 1192 |
| AciI | CCGC | 5 cut(s) | 132, 366, 652, 876, 1192 |
| AclWI | GGATC | 3 cut(s) | 197, 342, 553 |
| AcoI | YGGCCR | 1 cut(s) | 359 |
| AcsI | RAATTY | 5 cut(s) | 394, 514, 724, 787, 1090 |
| AcuI | CTGAAG | 1 cut(s) | 273 |
| AfaI | GTAC | 2 cut(s) | 848, 1059 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 616, 727, 875 |
| AgsI | TTSAA | 9 cut(s) | 8, 349, 519, 543, 769, 829, 835, 1082, 1162 |
| AjnI | CCWGG | 2 cut(s) | 64, 1279 |
| AleI | CACNNNNGTG | 1 cut(s) | 1002 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1142, 1174 |
| AluBI | AGCT | 7 cut(s) | 489, 672, 710, 741, 921, 1012, 1362 |
| AluI | AGCT | 7 cut(s) | 489, 672, 710, 741, 921, 1012, 1362 |
| Alw21I | GWGCWC | 2 cut(s) | 491, 923 |
| AlwI | GGATC | 3 cut(s) | 197, 342, 553 |
| AoxI | GGCC | 5 cut(s) | 359, 590, 689, 1268, 1282 |
| ApeKI | GCWGC | 4 cut(s) | 368, 838, 1009, 1331 |
| ApoI | RAATTY | 5 cut(s) | 394, 514, 724, 787, 1090 |
| AseI | ATTAAT | 2 cut(s) | 42, 1227 |
| Asp718I | GGTACC | 1 cut(s) | 846 |
| AspLEI | GCGC | 1 cut(s) | 1197 |
| AspS9I | GGNCC | 3 cut(s) | 590, 856, 1283 |
| AsuC2I | CCSGG | 1 cut(s) | 563 |
| AsuHPI | GGTGA | 1 cut(s) | 1137 |
| AvaII | GGWCC | 1 cut(s) | 856 |
| AxyI | CCTNAGG | 1 cut(s) | 449 |
| BalI | TGGCCA | 1 cut(s) | 361 |
| BanI | GGYRCC | 1 cut(s) | 846 |
| BanII | GRGCYC | 2 cut(s) | 491, 923 |
| BbsI | GAAGAC | 2 cut(s) | 276, 1206 |
| Bbv12I | GWGCWC | 2 cut(s) | 491, 923 |
| BbvI | GCAGC | 4 cut(s) | 355, 850, 1021, 1343 |
| BccI | CCATC | 1 cut(s) | 170 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1363, 1397 |
| BciT130I | CCWGG | 2 cut(s) | 66, 1281 |
| BciVI | GTATCC | 1 cut(s) | 936 |
| BclI | TGATCA | 2 cut(s) | 46, 109 |
| BcnI | CCSGG | 1 cut(s) | 563 |
| BfaI | CTAG | 3 cut(s) | 735, 1055, 1385 |
| BfmI | CTRYAG | 1 cut(s) | 1085 |
| BfoI | RGCGCY | 1 cut(s) | 1198 |
| BfuI | GTATCC | 1 cut(s) | 936 |
| BisI | GCNGC | 5 cut(s) | 369, 839, 1010, 1193, 1332 |
| BlpI | GCTNAGC | 1 cut(s) | 742 |
| BlsI | GCNGC | 5 cut(s) | 370, 840, 1011, 1194, 1333 |
| Bme1390I | CCNGG | 3 cut(s) | 66, 563, 1281 |
| Bme18I | GGWCC | 1 cut(s) | 856 |
| BmgT120I | GGNCC | 3 cut(s) | 590, 856, 1283 |
| BmiI | GGNNCC | 3 cut(s) | 130, 848, 1285 |
| BmrFI | CCNGG | 3 cut(s) | 66, 563, 1281 |
| BmsI | GCATC | 2 cut(s) | 575, 808 |
| BpiI | GAAGAC | 2 cut(s) | 276, 1206 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 742 |
| BpuEI | CTTGAG | 2 cut(s) | 706, 1217 |
| BpuMI | CCSGG | 1 cut(s) | 563 |
| BsaWI | WCCGGW | 2 cut(s) | 387, 1147 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 616, 727, 875 |
| Bse1I | ACTGG | 3 cut(s) | 53, 162, 362 |
| Bse21I | CCTNAGG | 1 cut(s) | 449 |
| BseBI | CCWGG | 2 cut(s) | 66, 1281 |
| BseGI | GGATG | 4 cut(s) | 631, 823, 913, 1050 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 616, 727, 875 |
| BseMII | CTCAG | 5 cut(s) | 386, 417, 440, 506, 756 |
| BseNI | ACTGG | 3 cut(s) | 53, 162, 362 |
| BseXI | GCAGC | 4 cut(s) | 355, 850, 1021, 1343 |
| BsgI | GTGCAG | 1 cut(s) | 1028 |
| Bsh1236I | CGCG | 1 cut(s) | 1192 |
| BshFI | GGCC | 5 cut(s) | 361, 592, 691, 1270, 1284 |
| BshNI | GGYRCC | 1 cut(s) | 846 |
| BsiHKAI | GWGCWC | 2 cut(s) | 491, 923 |
| BsiSI | CCGG | 4 cut(s) | 92, 388, 563, 1148 |
| BslFI | GGGAC | 1 cut(s) | 467 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 616, 727, 875 |
| BsmFI | GGGAC | 1 cut(s) | 467 |
| BsmI | GAATGC | 1 cut(s) | 383 |
| BsnI | GGCC | 5 cut(s) | 361, 592, 691, 1270, 1284 |
| Bsp1286I | GDGCHC | 2 cut(s) | 491, 923 |
| Bsp143I | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 742 |
| BspACI | CCGC | 5 cut(s) | 132, 366, 652, 876, 1192 |
| BspANI | GGCC | 5 cut(s) | 361, 592, 691, 1270, 1284 |
| BspCNI | CTCAG | 5 cut(s) | 385, 416, 441, 505, 755 |
| BspFNI | CGCG | 1 cut(s) | 1192 |
| BspLI | GGNNCC | 3 cut(s) | 130, 848, 1285 |
| BspMAI | CTGCAG | 1 cut(s) | 1089 |
| BspPI | GGATC | 3 cut(s) | 197, 342, 553 |
| BspT107I | GGYRCC | 1 cut(s) | 846 |
| BsrI | ACTGG | 3 cut(s) | 53, 162, 362 |
| BssMI | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| BssNAI | GTATAC | 1 cut(s) | 1177 |
| Bst1107I | GTATAC | 1 cut(s) | 1177 |
| Bst2UI | CCWGG | 2 cut(s) | 66, 1281 |
| Bst4CI | ACNGT | 4 cut(s) | 74, 318, 345, 954 |
| Bst6I | CTCTTC | 2 cut(s) | 438, 1259 |
| BstDEI | CTNAG | 6 cut(s) | 372, 403, 449, 492, 742, 752 |
| BstF5I | GGATG | 4 cut(s) | 631, 823, 913, 1050 |
| BstFNI | CGCG | 1 cut(s) | 1192 |
| BstH2I | RGCGCY | 1 cut(s) | 1198 |
| BstHHI | GCGC | 1 cut(s) | 1197 |
| BstKTI | GATC | 5 cut(s) | 49, 112, 205, 337, 561 |
| BstMBI | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 140 |
| BstNI | CCWGG | 2 cut(s) | 66, 1281 |
| BstSCI | CCNGG | 3 cut(s) | 64, 561, 1279 |
| BstSFI | CTRYAG | 1 cut(s) | 1085 |
| BstUI | CGCG | 1 cut(s) | 1192 |
| BstV1I | GCAGC | 4 cut(s) | 355, 850, 1021, 1343 |
| BstV2I | GAAGAC | 2 cut(s) | 276, 1206 |
| BstX2I | RGATCY | 1 cut(s) | 558 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 896 |
| BstYI | RGATCY | 1 cut(s) | 558 |
| BstZ17I | GTATAC | 1 cut(s) | 1177 |
| Bsu36I | CCTNAGG | 1 cut(s) | 449 |
| BsuI | GTATCC | 1 cut(s) | 936 |
| BsuRI | GGCC | 5 cut(s) | 361, 592, 691, 1270, 1284 |
| BtsCI | GGATG | 4 cut(s) | 631, 823, 913, 1050 |
| BtsIMutI | CAGTG | 2 cut(s) | 169, 959 |
| CfoI | GCGC | 1 cut(s) | 1197 |
| Cfr13I | GGNCC | 3 cut(s) | 590, 856, 1283 |
| CseI | GACGC | 2 cut(s) | 149, 740 |
| Csp6I | GTAC | 2 cut(s) | 847, 1058 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 145, 180 |
| CviAII | CATG | 5 cut(s) | 17, 58, 269, 664, 978 |
| CviQI | GTAC | 2 cut(s) | 847, 1058 |
| DdeI | CTNAG | 6 cut(s) | 372, 403, 449, 492, 742, 752 |
| DpnI | GATC | 5 cut(s) | 48, 111, 204, 336, 560 |
| DpnII | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| DraI | TTTAAA | 1 cut(s) | 421 |
| EaeI | YGGCCR | 1 cut(s) | 359 |
| Eam1104I | CTCTTC | 2 cut(s) | 438, 1259 |
| EarI | CTCTTC | 2 cut(s) | 438, 1259 |
| EciI | GGCGGA | 2 cut(s) | 121, 641 |
| Ecl136II | GAGCTC | 2 cut(s) | 489, 921 |
| Eco147I | AGGCCT | 2 cut(s) | 691, 1270 |
| Eco24I | GRGCYC | 2 cut(s) | 491, 923 |
| Eco47I | GGWCC | 1 cut(s) | 856 |
| Eco53kI | GAGCTC | 2 cut(s) | 489, 921 |
| Eco57I | CTGAAG | 1 cut(s) | 273 |
| Eco81I | CCTNAGG | 1 cut(s) | 449 |
| EcoICRI | GAGCTC | 2 cut(s) | 489, 921 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1283 |
| EcoRII | CCWGG | 2 cut(s) | 64, 1279 |
| EcoT38I | GRGCYC | 2 cut(s) | 491, 923 |
| FaeI | CATG | 5 cut(s) | 20, 61, 272, 667, 981 |
| FaqI | GGGAC | 1 cut(s) | 467 |
| FatI | CATG | 5 cut(s) | 16, 57, 268, 663, 977 |
| FauNDI | CATATG | 1 cut(s) | 1001 |
| FbaI | TGATCA | 2 cut(s) | 46, 109 |
| FblI | GTMKAC | 1 cut(s) | 1176 |
| Fnu4HI | GCNGC | 5 cut(s) | 369, 839, 1010, 1193, 1332 |
| FokI | GGATG | 4 cut(s) | 638, 830, 920, 1037 |
| FriOI | GRGCYC | 2 cut(s) | 491, 923 |
| Fsp4HI | GCNGC | 5 cut(s) | 369, 839, 1010, 1193, 1332 |
| FspBI | CTAG | 3 cut(s) | 735, 1055, 1385 |
| GlaI | GCGC | 1 cut(s) | 1196 |
| GluI | GCNGC | 5 cut(s) | 369, 839, 1010, 1193, 1332 |
| HaeII | RGCGCY | 1 cut(s) | 1198 |
| HaeIII | GGCC | 5 cut(s) | 361, 592, 691, 1270, 1284 |
| HapII | CCGG | 4 cut(s) | 92, 388, 563, 1148 |
| HgaI | GACGC | 2 cut(s) | 149, 740 |
| HhaI | GCGC | 1 cut(s) | 1197 |
| Hin1II | CATG | 5 cut(s) | 20, 61, 272, 667, 981 |
| Hin6I | GCGC | 1 cut(s) | 1195 |
| HinP1I | GCGC | 1 cut(s) | 1195 |
| HinfI | GANTC | 5 cut(s) | 25, 248, 539, 641, 1106 |
| HpaII | CCGG | 4 cut(s) | 92, 388, 563, 1148 |
| HphI | GGTGA | 1 cut(s) | 1137 |
| Hpy166II | GTNNAC | 2 cut(s) | 990, 1177 |
| Hpy188I | TCNGA | 3 cut(s) | 253, 260, 495 |
| Hpy188III | TCNNGA | 5 cut(s) | 245, 332, 543, 794, 959 |
| Hpy8I | GTNNAC | 2 cut(s) | 990, 1177 |
| HpyAV | CCTTC | 2 cut(s) | 757, 1145 |
| HpyCH4III | ACNGT | 4 cut(s) | 74, 318, 345, 954 |
| HpyCH4IV | ACGT | 1 cut(s) | 705 |
| HpyCH4V | TGCA | 9 cut(s) | 20, 280, 383, 556, 821, 1009, 1043, 1087, 1099 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 140 |
| HpyF3I | CTNAG | 6 cut(s) | 372, 403, 449, 492, 742, 752 |
| HpySE526I | ACGT | 1 cut(s) | 705 |
| Hsp92II | CATG | 5 cut(s) | 20, 61, 272, 667, 981 |
| HspAI | GCGC | 1 cut(s) | 1195 |
| KpnI | GGTACC | 1 cut(s) | 850 |
| Ksp22I | TGATCA | 2 cut(s) | 46, 109 |
| Kzo9I | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| LmnI | GCTCC | 2 cut(s) | 486, 715 |
| Lsp1109I | GCAGC | 4 cut(s) | 355, 850, 1021, 1343 |
| LweI | GCATC | 2 cut(s) | 575, 808 |
| MaeI | CTAG | 3 cut(s) | 735, 1055, 1385 |
| MaeII | ACGT | 1 cut(s) | 705 |
| MaeIII | GTNAC | 2 cut(s) | 443, 995 |
| MalI | GATC | 5 cut(s) | 48, 111, 204, 336, 560 |
| MboI | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| MboII | GAAGA | 7 cut(s) | 273, 276, 425, 1194, 1206, 1276, 1461 |
| MfeI | CAATTG | 1 cut(s) | 8 |
| MflI | RGATCY | 1 cut(s) | 558 |
| MhlI | GDGCHC | 2 cut(s) | 491, 923 |
| MlsI | TGGCCA | 1 cut(s) | 361 |
| MluNI | TGGCCA | 1 cut(s) | 361 |
| MmeI | TCCRAC | 2 cut(s) | 238, 885 |
| MnlI | CCTC | 7 cut(s) | 310, 334, 444, 484, 681, 1179, 1260 |
| Mox20I | TGGCCA | 1 cut(s) | 361 |
| MscI | TGGCCA | 1 cut(s) | 361 |
| MseI | TTAA | 9 cut(s) | 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1002, 1004 |
| Msp20I | TGGCCA | 1 cut(s) | 361 |
| MspA1I | CMGCKG | 1 cut(s) | 368 |
| MspI | CCGG | 4 cut(s) | 92, 388, 563, 1148 |
| MspR9I | CCNGG | 3 cut(s) | 66, 563, 1281 |
| MunI | CAATTG | 1 cut(s) | 8 |
| Mva1269I | GAATGC | 1 cut(s) | 383 |
| MvaI | CCWGG | 2 cut(s) | 66, 1281 |
| MvnI | CGCG | 1 cut(s) | 1192 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 140 |
| NciI | CCSGG | 1 cut(s) | 563 |
| NdeI | CATATG | 1 cut(s) | 1001 |
| NdeII | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| NlaIII | CATG | 5 cut(s) | 20, 61, 272, 667, 981 |
| NlaIV | GGNNCC | 3 cut(s) | 130, 848, 1285 |
| NmuCI | GTSAC | 1 cut(s) | 995 |
| OliI | CACNNNNGTG | 1 cut(s) | 1002 |
| PceI | AGGCCT | 2 cut(s) | 691, 1270 |
| PctI | GAATGC | 1 cut(s) | 383 |
| PfeI | GAWTC | 5 cut(s) | 25, 248, 539, 641, 1106 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 727 |
| PfoI | TCCNGGA | 1 cut(s) | 64 |
| PkrI | GCNGC | 5 cut(s) | 370, 840, 1011, 1194, 1333 |
| PshBI | ATTAAT | 2 cut(s) | 42, 1227 |
| PsiI | TTATAA | 1 cut(s) | 1410 |
| Psp124BI | GAGCTC | 2 cut(s) | 491, 923 |
| Psp6I | CCWGG | 2 cut(s) | 64, 1279 |
| PspGI | CCWGG | 2 cut(s) | 64, 1279 |
| PspN4I | GGNNCC | 3 cut(s) | 130, 848, 1285 |
| PspPI | GGNCC | 3 cut(s) | 590, 856, 1283 |
| PstI | CTGCAG | 1 cut(s) | 1089 |
| PsuI | RGATCY | 1 cut(s) | 558 |
| RsaI | GTAC | 2 cut(s) | 848, 1059 |
| RsaNI | GTAC | 2 cut(s) | 847, 1058 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1002, 1004 |
| SacI | GAGCTC | 2 cut(s) | 491, 923 |
| SaqAI | TTAA | 9 cut(s) | 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299 |
| SatI | GCNGC | 5 cut(s) | 369, 839, 1010, 1193, 1332 |
| Sau3AI | GATC | 5 cut(s) | 46, 109, 202, 334, 558 |
| Sau96I | GGNCC | 3 cut(s) | 590, 856, 1283 |
| ScrFI | CCNGG | 3 cut(s) | 66, 563, 1281 |
| SduI | GDGCHC | 2 cut(s) | 491, 923 |
| SfaNI | GCATC | 2 cut(s) | 575, 808 |
| SfcI | CTRYAG | 1 cut(s) | 1085 |
| SinI | GGWCC | 1 cut(s) | 856 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1002, 1004 |
| SmlI | CTYRAG | 2 cut(s) | 685, 1232 |
| SmoI | CTYRAG | 2 cut(s) | 685, 1232 |
| SseBI | AGGCCT | 2 cut(s) | 691, 1270 |
| SsiI | CCGC | 5 cut(s) | 132, 366, 652, 876, 1192 |
| SspI | AATATT | 2 cut(s) | 276, 1414 |
| SspMI | CTAG | 3 cut(s) | 735, 1055, 1385 |
| SstI | GAGCTC | 2 cut(s) | 491, 923 |
| StuI | AGGCCT | 2 cut(s) | 691, 1270 |
| StyD4I | CCNGG | 3 cut(s) | 64, 561, 1279 |
| TaaI | ACNGT | 4 cut(s) | 74, 318, 345, 954 |
| TaiI | ACGT | 1 cut(s) | 708 |
| TaqI | TCGA | 2 cut(s) | 773, 801 |
| TauI | GCSGC | 1 cut(s) | 1195 |
| TfiI | GAWTC | 5 cut(s) | 25, 248, 539, 641, 1106 |
| Tru1I | TTAA | 9 cut(s) | 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299 |
| Tru9I | TTAA | 9 cut(s) | 42, 233, 305, 420, 600, 1047, 1227, 1250, 1299 |
| TscAI | CASTG | 2 cut(s) | 169, 959 |
| TseFI | GTSAC | 1 cut(s) | 995 |
| TseI | GCWGC | 4 cut(s) | 368, 838, 1009, 1331 |
| Tsp45I | GTSAC | 1 cut(s) | 995 |
| TspDTI | ATGAA | 6 cut(s) | 203, 692, 944, 986, 1277, 1379 |
| TspGWI | ACGGA | 1 cut(s) | 877 |
| TspRI | CASTG | 2 cut(s) | 169, 959 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 727 |
| VpaK11BI | GGWCC | 1 cut(s) | 856 |
| VspI | ATTAAT | 2 cut(s) | 42, 1227 |
| XapI | RAATTY | 5 cut(s) | 394, 514, 724, 787, 1090 |
| XmiI | GTMKAC | 1 cut(s) | 1176 |
| XspI | CTAG | 3 cut(s) | 735, 1055, 1385 |