pycom15g06210
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005362
Physical Location & Seq
Reverse (-)
3818084 .. 3819015
932 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g06210.4

Sequence Viewer

Length: 543 bp
ATGGAGAAGATCTGCATAGCGGTTCCAGTGAGGCCTCCGGTACCTCACAATTCCTCCAACGGAACTCTCTGGAAGGTTGACGACAACCGCATTTCGCTCCACGAGCCCCACGGCAAGCCGATCTCCGGTATCTCTTACGCTTTCGGGTTTATGAGCTGCTCACCAAGGACATTATTCATGCCGCAGTCGAAGGATTCAATGGAACTACGTTTGCTTAATGGGCGGACTAGCAGTGGGAAGACTTTCACCATATTTGGTTCCGAAACAGATCCAGGTATCATTCATCAAGCCGTTAGAGATGTTTTTGACAGAATCCAGATGATGTCACACCGGGAGTTTCTGATTCGAGTATCCTACATGGAATTATACAATGAGGAAATTAACGACCTTTTTGCAGTAGAGAATCAGAAATTGCAGATTCATGAGAGTTTGGAGCGTGGCATATTTGTTGCTGGCCTCAGGGAGGAAATTGTCAGTAATGCTGAACAGGTGTTGAAGCTCATTGAATCTGGAGAAGATTTGCACTTTGAAACCAAAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000779 GO:0000793 GO:0000819 GO:0001932 GO:0001934 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005828 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005876 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007088 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009893 GO:0009987 GO:0010562 GO:0010564 GO:0010604 GO:0010965 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019220 GO:0019222 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022607 GO:0030071 GO:0030496 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0033674 GO:0034508 GO:0034622 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043515 GO:0043549 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045859 GO:0045860 GO:0045937 GO:0048002 GO:0048193 GO:0048285 GO:0048518 GO:0048522 GO:0050000 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051233 GO:0051234 GO:0051246 GO:0051247 GO:0051276 GO:0051303 GO:0051305 GO:0051310 GO:0051315 GO:0051338 GO:0051347 GO:0051382 GO:0051383 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051726 GO:0051783 GO:0051983 GO:0060255 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070925 GO:0071824 GO:0071840 GO:0072686 GO:0080090 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099606 GO:0099607 GO:0140014 GO:1901987 GO:1901990 GO:1902099 GO:1902850 GO:1903047 GO:1905818 GO:1990023
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

181

Amino Acids

20.49

Weight (kDa)

5.64

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 40
AccB1I GGYRCC 1 cut(s) 40
AciI CCGC 4 cut(s) 20, 88, 182, 223
AclWI GGATC 1 cut(s) 263
AfaI GTAC 1 cut(s) 42
AfiI CCNNNNNNNGG 2 cut(s) 125, 463
AgsI TTSAA 4 cut(s) 198, 496, 506, 530
AjnI CCWGG 1 cut(s) 271
AluBI AGCT 2 cut(s) 156, 499
AluI AGCT 2 cut(s) 156, 499
AlwI GGATC 1 cut(s) 263
AoxI GGCC 2 cut(s) 32, 454
ApeKI GCWGC 1 cut(s) 156
Asp700I GAANNNNTTC 1 cut(s) 242
Asp718I GGTACC 1 cut(s) 40
AsuC2I CCSGG 1 cut(s) 332
AsuHPI GGTGA 2 cut(s) 153, 238
AxyI CCTNAGG 1 cut(s) 458
BanI GGYRCC 1 cut(s) 40
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 1 cut(s) 101
BbsI GAAGAC 1 cut(s) 245
BbvI GCAGC 1 cut(s) 143
BceAI ACGGC 2 cut(s) 127, 275
BcgI CGANNNNNNTGC 2 cut(s) 374, 408
BciT130I CCWGG 1 cut(s) 273
BciVI GTATCC 1 cut(s) 361
BcnI CCSGG 1 cut(s) 332
BfaI CTAG 1 cut(s) 228
BfuI GTATCC 1 cut(s) 361
BglII AGATCT 1 cut(s) 9
BisI GCNGC 2 cut(s) 157, 182
BlsI GCNGC 2 cut(s) 158, 183
Bme1390I CCNGG 2 cut(s) 273, 332
BmiI GGNNCC 3 cut(s) 24, 42, 259
BmrFI CCNGG 2 cut(s) 273, 332
BpiI GAAGAC 1 cut(s) 245
BpmI CTGGAG 1 cut(s) 531
BpuMI CCSGG 1 cut(s) 332
BsaJI CCNNGG 2 cut(s) 109, 164
BsaWI WCCGGW 2 cut(s) 37, 125
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
Bsc4I CCNNNNNNNGG 2 cut(s) 125, 463
Bse1I ACTGG 1 cut(s) 26
Bse21I CCTNAGG 1 cut(s) 458
BseBI CCWGG 1 cut(s) 273
BseDI CCNNGG 2 cut(s) 109, 164
BseLI CCNNNNNNNGG 2 cut(s) 125, 463
BseMII CTCAG 1 cut(s) 472
BseNI ACTGG 1 cut(s) 26
BseXI GCAGC 1 cut(s) 143
BshFI GGCC 2 cut(s) 34, 456
BshNI GGYRCC 1 cut(s) 40
BsiSI CCGG 3 cut(s) 38, 126, 331
BslI CCNNNNNNNGG 2 cut(s) 125, 463
BsnI GGCC 2 cut(s) 34, 456
Bsp1286I GDGCHC 1 cut(s) 108
Bsp143I GATC 3 cut(s) 9, 120, 268
BspACI CCGC 4 cut(s) 20, 88, 182, 223
BspANI GGCC 2 cut(s) 34, 456
BspCNI CTCAG 1 cut(s) 471
BspHI TCATGA 1 cut(s) 421
BspLI GGNNCC 3 cut(s) 24, 42, 259
BspPI GGATC 1 cut(s) 263
BspT107I GGYRCC 1 cut(s) 40
BsrI ACTGG 1 cut(s) 26
BssECI CCNNGG 2 cut(s) 109, 164
BssMI GATC 3 cut(s) 9, 120, 268
BssSI CACGAG 1 cut(s) 101
BssT1I CCWWGG 1 cut(s) 164
Bst2BI CACGAG 1 cut(s) 101
Bst2UI CCWGG 1 cut(s) 273
BstC8I GCNNGC 2 cut(s) 116, 454
BstDEI CTNAG 1 cut(s) 458
BstDSI CCRYGG 1 cut(s) 109
BstENI CCTNNNNNAGG 1 cut(s) 461
BstKTI GATC 3 cut(s) 12, 123, 271
BstMBI GATC 3 cut(s) 9, 120, 268
BstMWI GCNNNNNNNGC 2 cut(s) 103, 220
BstNI CCWGG 1 cut(s) 273
BstSCI CCNGG 2 cut(s) 271, 330
BstV1I GCAGC 1 cut(s) 143
BstV2I GAAGAC 1 cut(s) 245
BstX2I RGATCY 2 cut(s) 9, 268
BstYI RGATCY 2 cut(s) 9, 268
Bsu36I CCTNAGG 1 cut(s) 458
BsuI GTATCC 1 cut(s) 361
BsuRI GGCC 2 cut(s) 34, 456
BtgI CCRYGG 1 cut(s) 109
BtsI GCAGTG 1 cut(s) 238
BtsIMutI CAGTG 2 cut(s) 33, 238
Cac8I GCNNGC 2 cut(s) 116, 454
CciI TCATGA 1 cut(s) 421
Csp6I GTAC 1 cut(s) 41
CviAII CATG 3 cut(s) 178, 358, 422
CviJI RGCY 7 cut(s) 34, 106, 118, 156, 290, 456, 499
CviKI_1 RGCY 7 cut(s) 34, 106, 118, 156, 290, 456, 499
CviQI GTAC 1 cut(s) 41
DdeI CTNAG 1 cut(s) 458
DpnI GATC 3 cut(s) 11, 122, 270
DpnII GATC 3 cut(s) 9, 120, 268
EciI GGCGGA 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 164
Eco147I AGGCCT 1 cut(s) 34
Eco24I GRGCYC 1 cut(s) 108
Eco81I CCTNAGG 1 cut(s) 458
EcoNI CCTNNNNNAGG 1 cut(s) 461
EcoRII CCWGG 1 cut(s) 271
EcoT14I CCWWGG 1 cut(s) 164
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 164
FaeI CATG 3 cut(s) 181, 361, 425
FaiI YATR 8 cut(s) 17, 152, 179, 251, 359, 367, 423, 443
FatI CATG 3 cut(s) 177, 357, 421
Fnu4HI GCNGC 2 cut(s) 157, 182
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 2 cut(s) 157, 182
FspBI CTAG 1 cut(s) 228
GluI GCNGC 2 cut(s) 157, 182
GsuI CTGGAG 1 cut(s) 531
HaeIII GGCC 2 cut(s) 34, 456
HapII CCGG 3 cut(s) 38, 126, 331
Hin1II CATG 3 cut(s) 181, 361, 425
HincII GTYRAC 1 cut(s) 79
HindII GTYRAC 1 cut(s) 79
HinfI GANTC 6 cut(s) 194, 312, 343, 403, 418, 506
HpaII CCGG 3 cut(s) 38, 126, 331
HphI GGTGA 2 cut(s) 153, 238
Hpy166II GTNNAC 1 cut(s) 79
Hpy188I TCNGA 3 cut(s) 262, 342, 408
Hpy188III TCNNGA 4 cut(s) 70, 316, 422, 510
Hpy8I GTNNAC 1 cut(s) 79
HpyAV CCTTC 2 cut(s) 67, 184
HpyCH4IV ACGT 1 cut(s) 208
HpyCH4V TGCA 4 cut(s) 15, 395, 415, 523
HpyF10VI GCNNNNNNNGC 2 cut(s) 103, 220
HpyF3I CTNAG 1 cut(s) 458
HpySE526I ACGT 1 cut(s) 208
Hsp92II CATG 3 cut(s) 181, 361, 425
KpnI GGTACC 1 cut(s) 44
Kzo9I GATC 3 cut(s) 9, 120, 268
LmnI GCTCC 2 cut(s) 102, 433
Lsp1109I GCAGC 1 cut(s) 143
MaeI CTAG 1 cut(s) 228
MaeII ACGT 1 cut(s) 208
MaeIII GTNAC 1 cut(s) 324
MalI GATC 3 cut(s) 11, 122, 270
MboI GATC 3 cut(s) 9, 120, 268
MboII GAAGA 3 cut(s) 19, 250, 527
MflI RGATCY 2 cut(s) 9, 268
MhlI GDGCHC 1 cut(s) 108
MluCI AATT 5 cut(s) 49, 362, 378, 410, 468
MmeI TCCRAC 1 cut(s) 81
MnlI CCTC 7 cut(s) 24, 45, 54, 64, 367, 457, 467
MroXI GAANNNNTTC 1 cut(s) 242
MseI TTAA 2 cut(s) 216, 381
MspI CCGG 3 cut(s) 38, 126, 331
MspR9I CCNGG 2 cut(s) 273, 332
MvaI CCWGG 1 cut(s) 273
MwoI GCNNNNNNNGC 2 cut(s) 103, 220
NciI CCSGG 1 cut(s) 332
NdeII GATC 3 cut(s) 9, 120, 268
NlaIII CATG 3 cut(s) 181, 361, 425
NlaIV GGNNCC 3 cut(s) 24, 42, 259
NmuCI GTSAC 1 cut(s) 324
PagI TCATGA 1 cut(s) 421
PceI AGGCCT 1 cut(s) 34
PdmI GAANNNNTTC 1 cut(s) 242
PfeI GAWTC 6 cut(s) 194, 312, 343, 403, 418, 506
PkrI GCNGC 2 cut(s) 158, 183
Psp6I CCWGG 1 cut(s) 271
PspGI CCWGG 1 cut(s) 271
PspN4I GGNNCC 3 cut(s) 24, 42, 259
PsuI RGATCY 2 cut(s) 9, 268
RsaI GTAC 1 cut(s) 42
RsaNI GTAC 1 cut(s) 41
SaqAI TTAA 2 cut(s) 216, 381
SatI GCNGC 2 cut(s) 157, 182
Sau3AI GATC 3 cut(s) 9, 120, 268
ScrFI CCNGG 2 cut(s) 273, 332
SduI GDGCHC 1 cut(s) 108
SetI ASST 8 cut(s) 46, 78, 158, 211, 277, 390, 492, 501
Sse9I AATT 5 cut(s) 49, 362, 378, 410, 468
SseBI AGGCCT 1 cut(s) 34
SsiI CCGC 4 cut(s) 20, 88, 182, 223
SspMI CTAG 1 cut(s) 228
StuI AGGCCT 1 cut(s) 34
StyD4I CCNGG 2 cut(s) 271, 330
StyI CCWWGG 1 cut(s) 164
TaiI ACGT 1 cut(s) 211
TaqI TCGA 2 cut(s) 188, 346
TasI AATT 5 cut(s) 49, 362, 378, 410, 468
TauI GCSGC 1 cut(s) 184
TfiI GAWTC 6 cut(s) 194, 312, 343, 403, 418, 506
Tru1I TTAA 2 cut(s) 216, 381
Tru9I TTAA 2 cut(s) 216, 381
TscAI CASTG 2 cut(s) 33, 238
TseFI GTSAC 1 cut(s) 324
TseI GCWGC 1 cut(s) 156
Tsp45I GTSAC 1 cut(s) 324
TspDTI ATGAA 3 cut(s) 166, 272, 410
TspGWI ACGGA 1 cut(s) 75
TspRI CASTG 2 cut(s) 33, 238
XagI CCTNNNNNAGG 1 cut(s) 461
XmnI GAANNNNTTC 1 cut(s) 242
XspI CTAG 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.