Rmu_sc0000507.1_g000001
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000507.1
OG0005362
Physical Location & Seq
Reverse (-)
1038 .. 5792
4755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000507.1_g000001.1.cds

Sequence Viewer

Length: 1038 bp
atggaaagaatacacgtcaccgtgcgggctcggccgctctcagccgacgacgccaaaaccagcccttggcgtatttccggcaactccattttcatccccaactcctcctccaagttcgaattcgatcgggttttcggtgaagactgtaagaccagcgaggtctatcagtctcggaccaaagatttagtcgaggctgctgttcgcggtttcaatggaacagtgtttgcttatggccaaactaatagtggaaagacttacacaattcgtggttcggctaccgagcctggagtgattcgacttgctgtgcgtgatatgttcgaccttattcaacaggatgtggatcgggagtttcttctgcggatgtcttatatggagatctacaatgaggaaataaatgatttattggctcccgagcatcgaaaattgcagatccatgaaagtatagagcggggaatttttgttgctgggttgcgagaagaaattgttgcctctcctgagcaagtccttgctctcatggagtttggagagtccgacgacgccaaaaccagcccttggcgtatttccggcaactccattttcatccccaactcctcctccaagttcgaattcgatcgggttttcggtgaagactgtaagaccagcgaggtctatcagtctcggaccaaagatttagtcgaggctgctgttcgcggtttcaatggaacagtgtttgcttatggccaaactaatagtggaaagacttacacaattcgtggttcggctaccgagcctggagtgattcgacttgctgtgcgtgatatgttcgaccttattcaacaggatgtggatcgggagtttcttctgcggatgtcttatatggagatctacaatgaggaaataaatgatttattggctcccgagcatcgaaaattgcagatccatgaaagtatagagcggggaatttttgttgctgggttgcgagaagaaattgttgcctctcctgagcaagtccttcatctcatggagtttggagagtgtaattatcttttacacttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000779 GO:0000793 GO:0000819 GO:0001932 GO:0001934 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005828 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005876 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0007079 GO:0007080 GO:0007088 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009893 GO:0009987 GO:0010562 GO:0010564 GO:0010604 GO:0010965 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019220 GO:0019222 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022607 GO:0030071 GO:0030496 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033045 GO:0033047 GO:0033674 GO:0034508 GO:0034622 GO:0042325 GO:0042327 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043515 GO:0043549 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045859 GO:0045860 GO:0045937 GO:0048002 GO:0048193 GO:0048285 GO:0048518 GO:0048522 GO:0050000 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051233 GO:0051234 GO:0051246 GO:0051247 GO:0051276 GO:0051303 GO:0051305 GO:0051310 GO:0051315 GO:0051338 GO:0051347 GO:0051382 GO:0051383 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051726 GO:0051783 GO:0051983 GO:0060255 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070925 GO:0071824 GO:0071840 GO:0072686 GO:0080090 GO:0098687 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099606 GO:0099607 GO:0140014 GO:1901987 GO:1901990 GO:1902099 GO:1902850 GO:1903047 GO:1905818 GO:1990023
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

345

Amino Acids

39.33

Weight (kDa)

5.0

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 66, 552
AccBSI CCGCTC 3 cut(s) 37, 448, 934
AccII CGCG 2 cut(s) 204, 690
AciI CCGC 8 cut(s) 25, 35, 204, 358, 448, 690, 844, 934
AclWI GGATC 4 cut(s) 348, 424, 834, 910
AcoI YGGCCR 3 cut(s) 32, 232, 718
AcsI RAATTY 4 cut(s) 119, 453, 605, 939
AcyI GRCGYC 2 cut(s) 51, 537
AfiI CCNNNNNNNGG 2 cut(s) 66, 552
AflIII ACRYGT 1 cut(s) 13
AgsI TTSAA 4 cut(s) 211, 329, 697, 815
AjiI CACGTC 1 cut(s) 16
AjnI CCWGG 2 cut(s) 283, 769
AjuI GAANNNNNNNTTGG 4 cut(s) 104, 136, 590, 622
Alw26I GTCTC 2 cut(s) 174, 660
AlwI GGATC 4 cut(s) 348, 424, 834, 910
Ama87I CYCGRG 2 cut(s) 410, 896
AoxI GGCC 3 cut(s) 32, 232, 718
ApeKI GCWGC 2 cut(s) 194, 680
ApoI RAATTY 4 cut(s) 119, 453, 605, 939
ArsI GACNNNNNNTTYG 4 cut(s) 171, 203, 657, 689
AspS9I GGNCC 2 cut(s) 174, 660
AsuHPI GGTGA 3 cut(s) 10, 149, 635
AsuII TTCGAA 2 cut(s) 117, 603
AvaI CYCGRG 2 cut(s) 410, 896
AvaII GGWCC 2 cut(s) 174, 660
BalI TGGCCA 2 cut(s) 234, 720
BanII GRGCYC 1 cut(s) 31
BbsI GAAGAC 2 cut(s) 147, 633
BbvI GCAGC 2 cut(s) 181, 667
BciT130I CCWGG 2 cut(s) 285, 771
BcoDI GTCTC 2 cut(s) 174, 660
BglII AGATCT 2 cut(s) 375, 861
BisI GCNGC 3 cut(s) 35, 195, 681
BlsI GCNGC 3 cut(s) 36, 196, 682
Bme1390I CCNGG 2 cut(s) 285, 771
Bme18I GGWCC 2 cut(s) 174, 660
BmeT110I CYCGRG 2 cut(s) 410, 896
BmgBI CACGTC 1 cut(s) 16
BmgT120I GGNCC 2 cut(s) 174, 660
BmiI GGNNCC 2 cut(s) 408, 894
BmrFI CCNGG 2 cut(s) 285, 771
BmsI GCATC 2 cut(s) 424, 910
BpiI GAAGAC 2 cut(s) 147, 633
BpmI CTGGAG 2 cut(s) 306, 792
Bpu10I CCTNAGC 2 cut(s) 495, 981
Bpu14I TTCGAA 2 cut(s) 117, 603
BsaBI GATNNNNATC 2 cut(s) 339, 825
BsaHI GRCGYC 2 cut(s) 51, 537
BsaJI CCNNGG 2 cut(s) 65, 551
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 578, 608
Bsc4I CCNNNNNNNGG 2 cut(s) 66, 552
Bse8I GATNNNNATC 2 cut(s) 339, 825
BseBI CCWGG 2 cut(s) 285, 771
BseDI CCNNGG 2 cut(s) 65, 551
BseGI GGATG 6 cut(s) 93, 340, 366, 579, 826, 852
BseJI GATNNNNATC 2 cut(s) 339, 825
BseLI CCNNNNNNNGG 2 cut(s) 66, 552
BseMII CTCAG 3 cut(s) 54, 486, 972
BseRI GAGGAG 4 cut(s) 94, 97, 580, 583
BseX3I CGGCCG 1 cut(s) 32
BseXI GCAGC 2 cut(s) 181, 667
BseYI CCCAGC 2 cut(s) 464, 950
Bsh1236I CGCG 2 cut(s) 204, 690
Bsh1285I CGRYCG 3 cut(s) 35, 127, 613
BshFI GGCC 3 cut(s) 34, 234, 720
BsiEI CGRYCG 3 cut(s) 35, 127, 613
BsiHKCI CYCGRG 2 cut(s) 410, 896
BsiSI CCGG 2 cut(s) 78, 564
BslI CCNNNNNNNGG 2 cut(s) 66, 552
BsmAI GTCTC 2 cut(s) 174, 660
BsnI GGCC 3 cut(s) 34, 234, 720
BsoBI CYCGRG 2 cut(s) 410, 896
Bsp119I TTCGAA 2 cut(s) 117, 603
Bsp1286I GDGCHC 1 cut(s) 31
Bsp143I GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
BspACI CCGC 8 cut(s) 25, 35, 204, 358, 448, 690, 844, 934
BspANI GGCC 3 cut(s) 34, 234, 720
BspCNI CTCAG 3 cut(s) 53, 487, 973
BspFNI CGCG 2 cut(s) 204, 690
BspLI GGNNCC 2 cut(s) 408, 894
BspPI GGATC 4 cut(s) 348, 424, 834, 910
BspT104I TTCGAA 2 cut(s) 117, 603
BsrBI CCGCTC 3 cut(s) 37, 448, 934
BssECI CCNNGG 2 cut(s) 65, 551
BssMI GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
BssNI GRCGYC 2 cut(s) 51, 537
BssT1I CCWWGG 2 cut(s) 65, 551
Bst2UI CCWGG 2 cut(s) 285, 771
Bst4CI ACNGT 5 cut(s) 22, 146, 220, 632, 706
BstACI GRCGYC 2 cut(s) 51, 537
BstBI TTCGAA 2 cut(s) 117, 603
BstC8I GCNNGC 1 cut(s) 27
BstDEI CTNAG 3 cut(s) 40, 495, 981
BstF5I GGATG 6 cut(s) 93, 340, 366, 579, 826, 852
BstFNI CGCG 2 cut(s) 204, 690
BstKTI GATC 8 cut(s) 127, 343, 378, 432, 613, 829, 864, 918
BstMAI GTCTC 2 cut(s) 174, 660
BstMBI GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
BstMCI CGRYCG 3 cut(s) 35, 127, 613
BstMWI GCNNNNNNNGC 2 cut(s) 31, 50
BstNI CCWGG 2 cut(s) 285, 771
BstSCI CCNGG 2 cut(s) 283, 769
BstUI CGCG 2 cut(s) 204, 690
BstV1I GCAGC 2 cut(s) 181, 667
BstV2I GAAGAC 2 cut(s) 147, 633
BstX2I RGATCY 4 cut(s) 375, 429, 861, 915
BstYI RGATCY 4 cut(s) 375, 429, 861, 915
BstZI CGGCCG 1 cut(s) 32
BsuRI GGCC 3 cut(s) 34, 234, 720
BtrI CACGTC 1 cut(s) 16
BtsCI GGATG 6 cut(s) 93, 340, 366, 579, 826, 852
BtsIMutI CAGTG 2 cut(s) 225, 711
Cac8I GCNNGC 1 cut(s) 27
Cfr13I GGNCC 2 cut(s) 174, 660
CseI GACGC 2 cut(s) 59, 545
CviAII CATG 4 cut(s) 434, 514, 920, 1000
DdeI CTNAG 3 cut(s) 40, 495, 981
DpnI GATC 8 cut(s) 126, 342, 377, 431, 612, 828, 863, 917
DpnII GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
EaeI YGGCCR 3 cut(s) 32, 232, 718
EagI CGGCCG 1 cut(s) 32
EclXI CGGCCG 1 cut(s) 32
Eco130I CCWWGG 2 cut(s) 65, 551
Eco24I GRGCYC 1 cut(s) 31
Eco47I GGWCC 2 cut(s) 174, 660
Eco52I CGGCCG 1 cut(s) 32
Eco88I CYCGRG 2 cut(s) 410, 896
EcoRI GAATTC 2 cut(s) 119, 605
EcoRII CCWGG 2 cut(s) 283, 769
EcoT14I CCWWGG 2 cut(s) 65, 551
EcoT38I GRGCYC 1 cut(s) 31
ErhI CCWWGG 2 cut(s) 65, 551
FaeI CATG 4 cut(s) 437, 517, 923, 1003
FatI CATG 4 cut(s) 433, 513, 919, 999
FauI CCCGC 3 cut(s) 18, 441, 927
Fnu4HI GCNGC 3 cut(s) 35, 195, 681
FokI GGATG 6 cut(s) 80, 347, 373, 566, 833, 859
FriOI GRGCYC 1 cut(s) 31
Fsp4HI GCNGC 3 cut(s) 35, 195, 681
GluI GCNGC 3 cut(s) 35, 195, 681
GsaI CCCAGC 2 cut(s) 468, 954
GsuI CTGGAG 2 cut(s) 306, 792
HaeIII GGCC 3 cut(s) 34, 234, 720
HapII CCGG 2 cut(s) 78, 564
HgaI GACGC 2 cut(s) 59, 545
Hin1I GRCGYC 2 cut(s) 51, 537
Hin1II CATG 4 cut(s) 437, 517, 923, 1003
HinfI GANTC 3 cut(s) 292, 527, 778
HpaII CCGG 2 cut(s) 78, 564
HphI GGTGA 3 cut(s) 10, 149, 635
Hpy188I TCNGA 4 cut(s) 174, 532, 660, 1037
Hpy188III TCNNGA 6 cut(s) 344, 410, 494, 830, 896, 980
Hpy99I CGWCG 4 cut(s) 50, 53, 536, 539
HpyAV CCTTC 1 cut(s) 1001
HpyCH4III ACNGT 5 cut(s) 22, 146, 220, 632, 706
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 2 cut(s) 427, 913
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 50
HpyF3I CTNAG 3 cut(s) 40, 495, 981
HpySE526I ACGT 1 cut(s) 15
Hsp92I GRCGYC 2 cut(s) 51, 537
Hsp92II CATG 4 cut(s) 437, 517, 923, 1003
Kzo9I GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
LmnI GCTCC 2 cut(s) 412, 898
Lsp1109I GCAGC 2 cut(s) 181, 667
LweI GCATC 2 cut(s) 424, 910
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 1 cut(s) 16
MalI GATC 8 cut(s) 126, 342, 377, 431, 612, 828, 863, 917
MbiI CCGCTC 3 cut(s) 37, 448, 934
MboI GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
MboII GAAGA 6 cut(s) 152, 344, 488, 638, 830, 974
MflI RGATCY 4 cut(s) 375, 429, 861, 915
MhlI GDGCHC 1 cut(s) 31
MlsI TGGCCA 2 cut(s) 234, 720
MluNI TGGCCA 2 cut(s) 234, 720
MlyI GAGTC 1 cut(s) 536
MmeI TCCRAC 1 cut(s) 555
Mox20I TGGCCA 2 cut(s) 234, 720
MscI TGGCCA 2 cut(s) 234, 720
Msp20I TGGCCA 2 cut(s) 234, 720
MspI CCGG 2 cut(s) 78, 564
MspR9I CCNGG 2 cut(s) 285, 771
MvaI CCWGG 2 cut(s) 285, 771
MvnI CGCG 2 cut(s) 204, 690
MwoI GCNNNNNNNGC 2 cut(s) 31, 50
NdeII GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
NlaIII CATG 4 cut(s) 437, 517, 923, 1003
NlaIV GGNNCC 2 cut(s) 408, 894
NmeAIII GCCGAG 1 cut(s) 10
NmuCI GTSAC 1 cut(s) 16
NspV TTCGAA 2 cut(s) 117, 603
PfeI GAWTC 2 cut(s) 292, 778
PflMI CCANNNNNTGG 2 cut(s) 66, 552
PkrI GCNGC 3 cut(s) 36, 196, 682
Ple19I CGATCG 2 cut(s) 127, 613
PleI GAGTC 1 cut(s) 535
PpsI GAGTC 1 cut(s) 535
Psp6I CCWGG 2 cut(s) 283, 769
PspFI CCCAGC 2 cut(s) 464, 950
PspGI CCWGG 2 cut(s) 283, 769
PspN4I GGNNCC 2 cut(s) 408, 894
PspPI GGNCC 2 cut(s) 174, 660
PsuI RGATCY 4 cut(s) 375, 429, 861, 915
PvuI CGATCG 2 cut(s) 127, 613
SatI GCNGC 3 cut(s) 35, 195, 681
Sau3AI GATC 8 cut(s) 124, 340, 375, 429, 610, 826, 861, 915
Sau96I GGNCC 2 cut(s) 174, 660
SchI GAGTC 1 cut(s) 536
ScrFI CCNGG 2 cut(s) 285, 771
SduI GDGCHC 1 cut(s) 31
SetI ASST 5 cut(s) 18, 162, 324, 648, 810
SfaNI GCATC 2 cut(s) 424, 910
SfuI TTCGAA 2 cut(s) 117, 603
SinI GGWCC 2 cut(s) 174, 660
SsiI CCGC 8 cut(s) 25, 35, 204, 358, 448, 690, 844, 934
StyD4I CCNGG 2 cut(s) 283, 769
StyI CCWWGG 2 cut(s) 65, 551
TaaI ACNGT 5 cut(s) 22, 146, 220, 632, 706
TaiI ACGT 1 cut(s) 18
TauI GCSGC 1 cut(s) 37
TfiI GAWTC 2 cut(s) 292, 778
TscAI CASTG 2 cut(s) 225, 711
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 2 cut(s) 194, 680
Tsp45I GTSAC 1 cut(s) 16
TspDTI ATGAA 5 cut(s) 82, 450, 568, 936, 983
TspRI CASTG 2 cut(s) 225, 711
Van91I CCANNNNNTGG 2 cut(s) 66, 552
VpaK11BI GGWCC 2 cut(s) 174, 660
XapI RAATTY 4 cut(s) 119, 453, 605, 939
XcmI CCANNNNNNNNNTGG 2 cut(s) 242, 728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.