Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007650

Physical Location & Seq

Genomic Coordinates Reverse (-)

4107481 .. 4112005

Gene Structure 4525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGTCGAACCGAAACACTCACCCCCGGCCCGCCGGAAGCAAGGGTTTCCCAAAACCCCAAAAGGTCTTCGTCCCCAAGAATCCAGACCACAACAATCCAATCCCTCAAGAACCCAATCCCAACCCCACGCTCTCCACCTCACTCCGGCAATCGCTCTCCAAGCAGCAATCCAATCCCGAAACTTCCCCCGCTGCTTCGGCACCGCCGTCGGGGAGCAGGATTCGGATGGGGGAGAAAGGAGAGTGGGTGCCGAGCAGAGCTCAGGGTGGCAATTTCGTAAGTTACTTACCTCAGGACGAGGCGGTGGCGGCTGGGCTGGGCGCCAACGAAGGTGGTTTGGACGCCCTGGAATCGCAAAGAGTGGTGGATCTTCTTAACAGAGAGCTCTCTCGCTTGCTGAAGTTAAACCCAAAGGAGTTTTGGCGACAAGTGGCTAGTGATGCATCGTTGCATGAATTTCTGGATAGCTTCCTACAGTTTAGGAGCAGGTGGTATGATTTCCCTCATCGCGGCGCCAAGGAATTGGTGGCGGGGGTCATTGTTGGGGAGTTCGAATTGAGCCGGCGTGTTTTTATGGTGTTATATCGAATATCTTCTAATAGGGATCCTGGCGCTCGTCTTGCTGATAGTCTCAGTCCAAAAGATCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTGGACTTGCCTACGTTGTTAGACATATGTGCTATATATGGCCATGAAAATGAAGATTTGACCAGAGTGCTGGTTGGCAATGCAGTGAAAGCTCATACTAGGATCCATGACAGTTTGACTGCAGTTGCATCACATTTCCTTAGCATTGTCCAAACAATGTACCAACGTAGCAGCTCAGCCTTGGAGACCCTTTTTTCCTCTAGAAACTCTGGAGTACATGGATCCAGCCGTCTTCTTGCTGATTTATTGGAGGTTATGGACTTCATTAACGATGCAATTGTATCCATGGATGCTTTCCTAACTGCATACGAACCATCCGCTGTCTTCTTTTTGTGCCCTGTTGAAACCAGTCATGGGAACGAGGGATTATTAAGTACTCTAGCAAGGTTGCATGATTCATTGCTTCCATCTTTGCAGCGTGGGTTTCGAATAATTTCAGAAGATGGAGAAGATAAAATGGTGTCTAATATTACTAATATTGCTTTCAGTTTGAAGATGTTATCAATGAGAATTGTCAGATTTGGTTGGAAACTATTGGATTTATGCTATCTAAGTGACGACGCCTTCAAAGATAACCTCCCCATTCCGGCTGCTGCAGAGATGTTTCCAGCCAAAGTGGAGGATCTTTTCATTAGAGCAGATATACTGGTTCAAACCTTAAGAGAGATTAATGGAAATTCCGTATGTGCTCAAGAGAACCAGAATAGGCAAACATTTCTTCAAAACATTGAAAAGAACTTCAACATTATGAGCAAAATGGAGAATTTACAAAATACTGGATGGATAATCATGGATGATGAGCAGCTGGGCTATGTATATGTAATACTTACGTCTACTCAGAAACTCATAGTTAAGCAGCAGCCCAGTACGAAAGCCGCTTTGACGAACAAAAAGGTGCAGATAGATGAAGATGTTGCAGTTGTGGAGTCGCGAATCAGTCAAATAAAGGACCTCTTCCCTGATTATGGAAAAGGTTTTTTAGCTGCTTGTCTTGAAGCCTATAACCAAAATCCTGAGGAGGTTATTCAGAGGATTCTTGAAGGAACTCTTCATGAAGATCTGCTGTCCTTGGATACGTCATTAGAAACATTGCCAACACCCAAGACTGTTACTGTTAGTAAGAACGATAAAGGGAAAGGAAAGCTAGTTGAGTTTACAGCACCACACGCTGGTGTGAGGGATAAACAAAATGGTGGCCCTTTGGTTTCATCATCCTCATCACAAGGAAGGTTTGTTAGGAAGTCTAAAGCAGACGTACCTGATACTGATACACTGGATGACAGAAATGAGAAATACATTGCAAAAACTGCTGCTCTTATTTCACAGTTTGAGTATGACGATGAGTATGATGACTCTTTCGATGATCTGGGTCTGAGTGTTGCAGATTCAGGAGTGGGGGAAAGTGAGATATTTAGTGAAAAAAGGAGCTCAATTACAGGTAGGCCGTGGGAAACACAAACTGGAAGTTCATCTCAGGATGCAGCTAATTCCAAATGGGGCTCCAGAAAGAAGCCCCAATATTATGTCAAGGATGGTAAGAATTACAGTTACAAAGTTGCAGGTTCGGTTGCAGTTGCAAATGCTGGTGAAGCATCATTAATTACTGACGCACAACAAGAAATGATTCACGGCCTTGGTCGTGGCGGCAATCTTCCTCTTGGCGCGGTTAAGAAGCTGACAGAATACTCGGAGGAGCAAGACAAACAATTTGACCATTCTCAGGCCGAAGAGAGGGGTCGGATGGATGGGAGAGGGTTTAGTGGGAATGCTAGGGGCAGAGGAAGGAGAGGAGGAAGGCAAGGGGAGTCCAATGAGGAGCAAGATAATAGACAAAATGATAACGGTGATGGTGAAGACCGAGAGAATGCCGGAAATCAAAGGGGGAGGGGGGGAAGGAGAGGAGGAGGCAGAGGGGGAGGGGGAAGAAATCATTTCAGAAAGGACCGGGCCATGAATAAGCACTTTTCTGGTATAGGTGGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006307 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0099053 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CUE

Protein Analysis

887

Amino Acids

97.92

Weight (kDa)

6.0

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CUE	PF02845	537 - 574	7.5e-11	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27752 AT1G27752
fragaria_vesca	FvH4_2g33210 FvH4_2g33210 FvH4_2g33210 FvH4_2g33210
malus_domestica	MD03G1160700.v1.1 MD08G1085900.v1.1 MD15G1071100.v1.1
prunus_persica	Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1
pyrus_communis	pycom08g07060 pycom15g06690
rosa_chinensis	RchiOBHm_Chr6g0309461
rosa_laevigata	RLG00000013072
rosa_multiflora	Rmu_sc0014034.1_g000003
rosa_rugosa	Rorug06G0372200
rosa_samantha	Rh6AG485300 Rh6BG494600 Rh6CG499600 Rh6DG485700
rosa_wichuraiana	Rw6G042270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	477
Acc36I	ACCTGC	2 cut(s)	477, 2225
AccB1I	GGYRCC	4 cut(s)	199, 247, 320, 512
AccB7I	CCANNNNNTGG	1 cut(s)	1844
AccI	GTMKAC	1 cut(s)	1508
AccII	CGCG	3 cut(s)	510, 1606, 2339
AclWI	GGATC	8 cut(s)	375, 599, 612, 772, 785, 891, 904, 1305
AcoI	YGGCCR	1 cut(s)	715
AcsI	RAATTY	3 cut(s)	455, 1351, 1438
AcuI	CTGAAG	1 cut(s)	419
AcyI	GRCGYC	4 cut(s)	321, 342, 513, 1236
AfaI	GTAC	5 cut(s)	836, 891, 1051, 1543, 1932
AfiI	CCNNNNNNNGG	9 cut(s)	144, 209, 509, 1029, 1261, 1640, 1844, 2395, 2406
AflII	CTTAAG	1 cut(s)	1333
AgsI	TTSAA	9 cut(s)	1019, 1168, 1243, 1328, 1397, 1406, 1417, 1670, 1715
AjnI	CCWGG	2 cut(s)	345, 607
AleI	CACNNNNGTG	1 cut(s)	1845
Alw21I	GWGCWC	4 cut(s)	262, 387, 1366, 2105
Alw26I	GTCTC	2 cut(s)	635, 854
AlwI	GGATC	8 cut(s)	375, 599, 612, 772, 785, 891, 904, 1305
AoxI	GGCC	7 cut(s)	26, 715, 1870, 2117, 2305, 2397, 2622
ApoI	RAATTY	3 cut(s)	455, 1351, 1438
ArsI	GACNNNNNNTTYG	2 cut(s)	2366, 2398
AseI	ATTAAT	2 cut(s)	1344, 2273
Asp700I	GAANNNNTTC	3 cut(s)	592, 1108, 2298
AspLEI	GCGC	4 cut(s)	323, 515, 614, 2339
AspS9I	GGNCC	5 cut(s)	27, 1624, 1871, 2617, 2622
AsuC2I	CCSGG	2 cut(s)	25, 2621
AsuHPI	GGTGA	4 cut(s)	11, 2273, 2531, 2537
AsuII	TTCGAA	2 cut(s)	552, 1102
AvaII	GGWCC	2 cut(s)	1624, 2617
AxyI	CCTNAGG	2 cut(s)	291, 1689
BaeGI	GKGCMC	1 cut(s)	1013
BalI	TGGCCA	1 cut(s)	717
BamHI	GGATCC	3 cut(s)	604, 777, 896
BanI	GGYRCC	4 cut(s)	199, 247, 320, 512
BanII	GRGCYC	4 cut(s)	262, 387, 2105, 2177
BbsI	GAAGAC	4 cut(s)	58, 899, 991, 2535
Bbv12I	GWGCWC	4 cut(s)	262, 387, 1366, 2105
BccI	CCATC	9 cut(s)	220, 997, 1090, 1112, 1449, 2201, 2410, 2414, 2516
BceAI	ACGGC	4 cut(s)	190, 888, 2104, 2320
BcgI	CGANNNNNNTGC	2 cut(s)	189, 223
BciT130I	CCWGG	2 cut(s)	347, 609
BciVI	GTATCC	2 cut(s)	967, 1741
BcnI	CCSGG	2 cut(s)	25, 2621
BcoDI	GTCTC	2 cut(s)	635, 854
BfaI	CTAG	6 cut(s)	435, 774, 876, 1055, 1820, 2445
BfmI	CTRYAG	3 cut(s)	473, 795, 1269
BfoI	RGCGCY	3 cut(s)	324, 516, 615
BfrI	CTTAAG	1 cut(s)	1333
BfuAI	ACCTGC	2 cut(s)	477, 2225
BfuI	GTATCC	2 cut(s)	967, 1741
BglII	AGATCT	1 cut(s)	1732
BlpI	GCTNAGC	1 cut(s)	850
BmcAI	AGTACT	1 cut(s)	1051
Bme1390I	CCNGG	4 cut(s)	25, 347, 609, 2621
Bme18I	GGWCC	2 cut(s)	1624, 2617
BmgT120I	GGNCC	5 cut(s)	27, 1624, 1871, 2617, 2622
BmiI	GGNNCC	8 cut(s)	201, 249, 322, 514, 606, 779, 898, 2176
BmrFI	CCNGG	4 cut(s)	25, 347, 609, 2621
BmrI	ACTGGG	1 cut(s)	1533
BmsI	GCATC	7 cut(s)	430, 452, 812, 937, 955, 2143, 2276
BmuI	ACTGGG	1 cut(s)	1533
BpiI	GAAGAC	4 cut(s)	58, 899, 991, 2535
BplI	GAGNNNNNCTC	2 cut(s)	244, 276
BpmI	CTGGAG	2 cut(s)	906, 2161
Bpu10I	CCTNAGC	2 cut(s)	261, 815
Bpu1102I	GCTNAGC	1 cut(s)	850
Bpu14I	TTCGAA	2 cut(s)	552, 1102
BpuEI	CTTGAG	2 cut(s)	90, 1350
BpuMI	CCSGG	2 cut(s)	25, 2621
BsaHI	GRCGYC	4 cut(s)	321, 342, 513, 1236
BsaI	GGTCTC	1 cut(s)	854
BsaJI	CCNNGG	8 cut(s)	23, 345, 516, 855, 960, 1743, 2120, 2308
BsaXI	ACNNNNNCTCC	4 cut(s)	231, 261, 656, 686
Bsc4I	CCNNNNNNNGG	9 cut(s)	144, 209, 509, 1029, 1261, 1640, 1844, 2395, 2406
Bse118I	RCCGGY	1 cut(s)	561
Bse1I	ACTGG	6 cut(s)	1023, 1326, 1456, 1539, 1953, 2140
Bse21I	CCTNAGG	2 cut(s)	291, 1689
Bse3DI	GCAATG	4 cut(s)	760, 1073, 1763, 1971
BseBI	CCWGG	2 cut(s)	347, 609
BseDI	CCNNGG	8 cut(s)	23, 345, 516, 855, 960, 1743, 2120, 2308
BseLI	CCNNNNNNNGG	9 cut(s)	144, 209, 509, 1029, 1261, 1640, 1844, 2395, 2406
BseMI	GCAATG	4 cut(s)	760, 1073, 1763, 1971
BseMII	CTCAG	9 cut(s)	275, 305, 646, 864, 1526, 1680, 2039, 2162, 2408
BseNI	ACTGG	6 cut(s)	1023, 1326, 1456, 1539, 1953, 2140
BseRI	GAGGAG	6 cut(s)	1706, 2381, 2478, 2504, 2589, 2592
BseSI	GKGCMC	1 cut(s)	1013
BseYI	CCCAGC	3 cut(s)	311, 316, 1480
BsgI	GTGCAG	1 cut(s)	1592
Bsh1236I	CGCG	3 cut(s)	510, 1606, 2339
BshFI	GGCC	7 cut(s)	28, 717, 1872, 2119, 2307, 2399, 2624
BshNI	GGYRCC	4 cut(s)	199, 247, 320, 512
BsiHKAI	GWGCWC	4 cut(s)	262, 387, 1366, 2105
BsiSI	CCGG	7 cut(s)	25, 33, 145, 562, 1262, 2544, 2620
BslFI	GGGAC	1 cut(s)	56
BslI	CCNNNNNNNGG	9 cut(s)	144, 209, 509, 1029, 1261, 1640, 1844, 2395, 2406
BsmAI	GTCTC	2 cut(s)	635, 854
BsmFI	GGGAC	1 cut(s)	56
BsmI	GAATGC	2 cut(s)	2446, 2545
BsnI	GGCC	7 cut(s)	28, 717, 1872, 2119, 2307, 2399, 2624
Bso31I	GGTCTC	1 cut(s)	854
Bsp119I	TTCGAA	2 cut(s)	552, 1102
Bsp1286I	GDGCHC	6 cut(s)	262, 387, 1013, 1366, 2105, 2177
Bsp143I	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
Bsp1720I	GCTNAGC	1 cut(s)	850
Bsp19I	CCATGG	1 cut(s)	960
Bsp68I	TCGCGA	1 cut(s)	1606
BspANI	GGCC	7 cut(s)	28, 717, 1872, 2119, 2307, 2399, 2624
BspCNI	CTCAG	9 cut(s)	274, 304, 645, 863, 1525, 1681, 2040, 2161, 2407
BspFNI	CGCG	3 cut(s)	510, 1606, 2339
BspHI	TCATGA	2 cut(s)	646, 1726
BspLI	GGNNCC	8 cut(s)	201, 249, 322, 514, 606, 779, 898, 2176
BspMAI	CTGCAG	2 cut(s)	799, 1273
BspMI	ACCTGC	2 cut(s)	477, 2225
BspPI	GGATC	8 cut(s)	375, 599, 612, 772, 785, 891, 904, 1305
BspT104I	TTCGAA	2 cut(s)	552, 1102
BspT107I	GGYRCC	4 cut(s)	199, 247, 320, 512
BspTI	CTTAAG	1 cut(s)	1333
BspTNI	GGTCTC	1 cut(s)	854
BsrDI	GCAATG	4 cut(s)	760, 1073, 1763, 1971
BsrFI	RCCGGY	1 cut(s)	561
BsrI	ACTGG	6 cut(s)	1023, 1326, 1456, 1539, 1953, 2140
BssAI	RCCGGY	1 cut(s)	561
BssECI	CCNNGG	8 cut(s)	23, 345, 516, 855, 960, 1743, 2120, 2308
BssMI	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
BssNI	GRCGYC	4 cut(s)	321, 342, 513, 1236
BssT1I	CCWWGG	5 cut(s)	516, 855, 960, 1743, 2308
Bst2UI	CCWGG	2 cut(s)	347, 609
Bst4CI	ACNGT	7 cut(s)	477, 788, 1783, 1789, 2001, 2222, 2519
Bst6I	CTCTTC	3 cut(s)	1634, 1728, 2397
BstACI	GRCGYC	4 cut(s)	321, 342, 513, 1236
BstAFI	CTTAAG	1 cut(s)	1333
BstAPI	GCANNNNNTGC	1 cut(s)	1982
BstBI	TTCGAA	2 cut(s)	552, 1102
BstC8I	GCNNGC	3 cut(s)	30, 395, 563
BstDSI	CCRYGG	2 cut(s)	960, 2120
BstFNI	CGCG	3 cut(s)	510, 1606, 2339
BstH2I	RGCGCY	3 cut(s)	324, 516, 615
BstHHI	GCGC	4 cut(s)	323, 515, 614, 2339
BstKTI	GATC	8 cut(s)	370, 607, 646, 780, 899, 1300, 1735, 2041
BstMAI	GTCTC	2 cut(s)	635, 854
BstMBI	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
BstNI	CCWGG	2 cut(s)	347, 609
BstSCI	CCNGG	4 cut(s)	23, 345, 607, 2619
BstSFI	CTRYAG	3 cut(s)	473, 795, 1269
BstSLI	GKGCMC	1 cut(s)	1013
BstUI	CGCG	3 cut(s)	510, 1606, 2339
BstV2I	GAAGAC	4 cut(s)	58, 899, 991, 2535
BstX2I	RGATCY	6 cut(s)	367, 604, 777, 896, 1297, 1732
BstXI	CCANNNNNNTGG	2 cut(s)	523, 745
BstYI	RGATCY	6 cut(s)	367, 604, 777, 896, 1297, 1732
Bsu36I	CCTNAGG	2 cut(s)	291, 1689
BsuI	GTATCC	2 cut(s)	967, 1741
BsuRI	GGCC	7 cut(s)	28, 717, 1872, 2119, 2307, 2399, 2624
BtgI	CCRYGG	2 cut(s)	960, 2120
BtgZI	GCGATG	1 cut(s)	491
BtsI	GCAGTG	1 cut(s)	765
BtsIMutI	CAGTG	2 cut(s)	765, 1946
BtuMI	TCGCGA	1 cut(s)	1606
BveI	ACCTGC	2 cut(s)	477, 2225
Cac8I	GCNNGC	3 cut(s)	30, 395, 563
CciI	TCATGA	2 cut(s)	646, 1726
CfoI	GCGC	4 cut(s)	323, 515, 614, 2339
Cfr10I	RCCGGY	1 cut(s)	561
Cfr13I	GGNCC	5 cut(s)	27, 1624, 1871, 2617, 2622
CseI	GACGC	3 cut(s)	350, 1244, 2291
Csp6I	GTAC	5 cut(s)	835, 890, 1050, 1542, 1931
CspCI	CAANNNNNGTGG	2 cut(s)	313, 348
CviQI	GTAC	5 cut(s)	835, 890, 1050, 1542, 1931
DinI	GGCGCC	2 cut(s)	322, 514
DpnI	GATC	8 cut(s)	369, 606, 645, 779, 898, 1299, 1734, 2040
DpnII	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
EaeI	YGGCCR	1 cut(s)	715
Eam1104I	CTCTTC	3 cut(s)	1634, 1728, 2397
EarI	CTCTTC	3 cut(s)	1634, 1728, 2397
Ecl136II	GAGCTC	3 cut(s)	260, 385, 2103
Eco130I	CCWWGG	5 cut(s)	516, 855, 960, 1743, 2308
Eco24I	GRGCYC	4 cut(s)	262, 387, 2105, 2177
Eco31I	GGTCTC	1 cut(s)	854
Eco47I	GGWCC	2 cut(s)	1624, 2617
Eco53kI	GAGCTC	3 cut(s)	260, 385, 2103
Eco57I	CTGAAG	1 cut(s)	419
Eco81I	CCTNAGG	2 cut(s)	291, 1689
EcoICRI	GAGCTC	3 cut(s)	260, 385, 2103
EcoO109I	RGGNCCY	1 cut(s)	1624
EcoRII	CCWGG	2 cut(s)	345, 607
EcoT14I	CCWWGG	5 cut(s)	516, 855, 960, 1743, 2308
EcoT22I	ATGCAT	1 cut(s)	445
EcoT38I	GRGCYC	4 cut(s)	262, 387, 2105, 2177
EgeI	GGCGCC	2 cut(s)	322, 514
EheI	GGCGCC	2 cut(s)	322, 514
ErhI	CCWWGG	5 cut(s)	516, 855, 960, 1743, 2308
FalI	AAGNNNNNCTT	4 cut(s)	1613, 1645, 1707, 1739
FaqI	GGGAC	1 cut(s)	56
FauI	CCCGC	3 cut(s)	37, 196, 523
FauNDI	CATATG	1 cut(s)	701
FblI	GTMKAC	1 cut(s)	1508
FriOI	GRGCYC	4 cut(s)	262, 387, 2105, 2177
FspBI	CTAG	6 cut(s)	435, 774, 876, 1055, 1820, 2445
GlaI	GCGC	4 cut(s)	322, 514, 613, 2338
GsaI	CCCAGC	3 cut(s)	315, 320, 1484
GsuI	CTGGAG	2 cut(s)	906, 2161
HaeII	RGCGCY	3 cut(s)	324, 516, 615
HaeIII	GGCC	7 cut(s)	28, 717, 1872, 2119, 2307, 2399, 2624
HapII	CCGG	7 cut(s)	25, 33, 145, 562, 1262, 2544, 2620
HgaI	GACGC	3 cut(s)	350, 1244, 2291
HhaI	GCGC	4 cut(s)	323, 515, 614, 2339
Hin1I	GRCGYC	4 cut(s)	321, 342, 513, 1236
Hin6I	GCGC	4 cut(s)	321, 513, 612, 2337
HinP1I	GCGC	4 cut(s)	321, 513, 612, 2337
HpaII	CCGG	7 cut(s)	25, 33, 145, 562, 1262, 2544, 2620
HphI	GGTGA	4 cut(s)	11, 2273, 2531, 2537
Hpy166II	GTNNAC	2 cut(s)	1509, 1830
Hpy188I	TCNGA	9 cut(s)	225, 1114, 1193, 1515, 1704, 2049, 2365, 2415, 2612
Hpy8I	GTNNAC	2 cut(s)	1509, 1830
Hpy99I	CGWCG	2 cut(s)	211, 1238
HpyAV	CCTTC	7 cut(s)	323, 1249, 1709, 1896, 2451, 2463, 2562
HpyCH4III	ACNGT	7 cut(s)	477, 788, 1783, 1789, 2001, 2222, 2519
HpyCH4IV	ACGT	5 cut(s)	689, 841, 1505, 1751, 1929
HpySE526I	ACGT	5 cut(s)	689, 841, 1505, 1751, 1929
Hsp92I	GRCGYC	4 cut(s)	321, 342, 513, 1236
HspAI	GCGC	4 cut(s)	321, 513, 612, 2337
KasI	GGCGCC	2 cut(s)	320, 512
KroI	GCCGGC	1 cut(s)	561
KroNI	GCCGGC	1 cut(s)	563
Kzo9I	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
LmnI	GCTCC	6 cut(s)	213, 483, 2100, 2180, 2368, 2491
LweI	GCATC	7 cut(s)	430, 452, 812, 937, 955, 2143, 2276
MaeI	CTAG	6 cut(s)	435, 774, 876, 1055, 1820, 2445
MaeII	ACGT	5 cut(s)	689, 841, 1505, 1751, 1929
MaeIII	GTNAC	4 cut(s)	281, 1229, 1783, 2222
MalI	GATC	8 cut(s)	369, 606, 645, 779, 898, 1299, 1734, 2040
MboI	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
MfeI	CAATTG	1 cut(s)	951
MflI	RGATCY	6 cut(s)	367, 604, 777, 896, 1297, 1732
MhlI	GDGCHC	6 cut(s)	262, 387, 1013, 1366, 2105, 2177
MlsI	TGGCCA	1 cut(s)	717
MluNI	TGGCCA	1 cut(s)	717
Mly113I	GGCGCC	2 cut(s)	321, 513
MlyI	GAGTC	3 cut(s)	1610, 2021, 2489
MmeI	TCCRAC	2 cut(s)	1181, 2393
Mox20I	TGGCCA	1 cut(s)	717
Mph1103I	ATGCAT	1 cut(s)	445
MroNI	GCCGGC	1 cut(s)	561
MroXI	GAANNNNTTC	3 cut(s)	592, 1108, 2298
MscI	TGGCCA	1 cut(s)	717
MseI	TTAA	9 cut(s)	375, 404, 942, 1046, 1334, 1344, 1527, 2273, 2343
MslI	CAYNNNNRTG	2 cut(s)	723, 1845
Msp20I	TGGCCA	1 cut(s)	717
MspA1I	CMGCKG	3 cut(s)	191, 995, 1480
MspCI	CTTAAG	1 cut(s)	1333
MspI	CCGG	7 cut(s)	25, 33, 145, 562, 1262, 2544, 2620
MspR9I	CCNGG	4 cut(s)	25, 347, 609, 2621
MunI	CAATTG	1 cut(s)	951
Mva1269I	GAATGC	2 cut(s)	2446, 2545
MvaI	CCWGG	2 cut(s)	347, 609
MvnI	CGCG	3 cut(s)	510, 1606, 2339
NaeI	GCCGGC	1 cut(s)	563
NarI	GGCGCC	2 cut(s)	321, 513
NciI	CCSGG	2 cut(s)	25, 2621
NcoI	CCATGG	1 cut(s)	960
NdeI	CATATG	1 cut(s)	701
NdeII	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
NgoMIV	GCCGGC	1 cut(s)	561
NlaIV	GGNNCC	8 cut(s)	201, 249, 322, 514, 606, 779, 898, 2176
NmeAIII	GCCGAG	1 cut(s)	276
NmuCI	GTSAC	1 cut(s)	1229
NruI	TCGCGA	1 cut(s)	1606
NsiI	ATGCAT	1 cut(s)	445
NspV	TTCGAA	2 cut(s)	552, 1102
OliI	CACNNNNGTG	1 cut(s)	1845
PagI	TCATGA	2 cut(s)	646, 1726
PaqCI	CACCTGC	1 cut(s)	477
PcsI	WCGNNNNNNNCGW	1 cut(s)	203
PctI	GAATGC	2 cut(s)	2446, 2545
PdiI	GCCGGC	1 cut(s)	563
PdmI	GAANNNNTTC	3 cut(s)	592, 1108, 2298
PfeI	GAWTC	8 cut(s)	79, 220, 350, 1070, 1608, 1708, 2060, 2299
PflMI	CCANNNNNTGG	1 cut(s)	1844
PleI	GAGTC	3 cut(s)	1609, 2021, 2488
PluTI	GGCGCC	2 cut(s)	324, 516
PpsI	GAGTC	3 cut(s)	1609, 2021, 2488
PpuMI	RGGWCCY	1 cut(s)	1624
PshBI	ATTAAT	2 cut(s)	1344, 2273
Psp124BI	GAGCTC	3 cut(s)	262, 387, 2105
Psp5II	RGGWCCY	1 cut(s)	1624
Psp6I	CCWGG	2 cut(s)	345, 607
PspFI	CCCAGC	3 cut(s)	311, 316, 1480
PspGI	CCWGG	2 cut(s)	345, 607
PspN4I	GGNNCC	8 cut(s)	201, 249, 322, 514, 606, 779, 898, 2176
PspPI	GGNCC	5 cut(s)	27, 1624, 1871, 2617, 2622
PspPPI	RGGWCCY	1 cut(s)	1624
PstI	CTGCAG	2 cut(s)	799, 1273
PsuI	RGATCY	6 cut(s)	367, 604, 777, 896, 1297, 1732
PvuII	CAGCTG	1 cut(s)	1480
RruI	TCGCGA	1 cut(s)	1606
RsaI	GTAC	5 cut(s)	836, 891, 1051, 1543, 1932
RsaNI	GTAC	5 cut(s)	835, 890, 1050, 1542, 1931
RseI	CAYNNNNRTG	2 cut(s)	723, 1845
SacI	GAGCTC	3 cut(s)	262, 387, 2105
SaqAI	TTAA	9 cut(s)	375, 404, 942, 1046, 1334, 1344, 1527, 2273, 2343
Sau3AI	GATC	8 cut(s)	367, 604, 643, 777, 896, 1297, 1732, 2038
Sau96I	GGNCC	5 cut(s)	27, 1624, 1871, 2617, 2622
ScaI	AGTACT	1 cut(s)	1051
SchI	GAGTC	3 cut(s)	1610, 2021, 2489
ScrFI	CCNGG	4 cut(s)	25, 347, 609, 2621
SduI	GDGCHC	6 cut(s)	262, 387, 1013, 1366, 2105, 2177
SfaNI	GCATC	7 cut(s)	430, 452, 812, 937, 955, 2143, 2276
SfcI	CTRYAG	3 cut(s)	473, 795, 1269
SfoI	GGCGCC	2 cut(s)	322, 514
SfuI	TTCGAA	2 cut(s)	552, 1102
SinI	GGWCC	2 cut(s)	1624, 2617
SmiMI	CAYNNNNRTG	2 cut(s)	723, 1845
SmlI	CTYRAG	3 cut(s)	105, 1333, 1365
SmoI	CTYRAG	3 cut(s)	105, 1333, 1365
SspDI	GGCGCC	2 cut(s)	320, 512
SspI	AATATT	3 cut(s)	1144, 1153, 2195
SspMI	CTAG	6 cut(s)	435, 774, 876, 1055, 1820, 2445
SstI	GAGCTC	3 cut(s)	262, 387, 2105
StyD4I	CCNGG	4 cut(s)	23, 345, 607, 2619
StyI	CCWWGG	5 cut(s)	516, 855, 960, 1743, 2308
TaaI	ACNGT	7 cut(s)	477, 788, 1783, 1789, 2001, 2222, 2519
TaiI	ACGT	5 cut(s)	692, 844, 1508, 1754, 1932
TaqI	TCGA	5 cut(s)	5, 552, 586, 1102, 2034
TaqII	GACCGA	1 cut(s)	2547
TatI	WGTACW	2 cut(s)	889, 1049
TauI	GCSGC	4 cut(s)	311, 513, 1553, 2322
TfiI	GAWTC	8 cut(s)	79, 220, 350, 1070, 1608, 1708, 2060, 2299
Tru1I	TTAA	9 cut(s)	375, 404, 942, 1046, 1334, 1344, 1527, 2273, 2343
Tru9I	TTAA	9 cut(s)	375, 404, 942, 1046, 1334, 1344, 1527, 2273, 2343
TscAI	CASTG	2 cut(s)	765, 1953
TseFI	GTSAC	1 cut(s)	1229
Tsp45I	GTSAC	1 cut(s)	1229
TspGWI	ACGGA	1 cut(s)	1345
TspRI	CASTG	2 cut(s)	765, 1953
Van91I	CCANNNNNTGG	1 cut(s)	1844
Vha464I	CTTAAG	1 cut(s)	1333
VpaK11BI	GGWCC	2 cut(s)	1624, 2617
VspI	ATTAAT	2 cut(s)	1344, 2273
XapI	RAATTY	3 cut(s)	455, 1351, 1438
XbaI	TCTAGA	1 cut(s)	875
XcmI	CCANNNNNNNNNTGG	2 cut(s)	417, 523
XmiI	GTMKAC	1 cut(s)	1508
XmnI	GAANNNNTTC	3 cut(s)	592, 1108, 2298
XspI	CTAG	6 cut(s)	435, 774, 876, 1055, 1820, 2445
ZrmI	AGTACT	1 cut(s)	1051
Zsp2I	ATGCAT	1 cut(s)	445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.