Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0007650

Physical Location & Seq

Genomic Coordinates Forward (+)

69626811 .. 69631688

Gene Structure 4878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG494600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2781 bp

ATGTCGAGTCACCGGAACCCTCAGGGCAACACTAATAGGCAAGCCGGAGGAAGCAAGGGTTTCACCAAAACCCAAAAGGTCTTCGTCCCCAAAAATCAAGACCAGAATCGTCCCAGAAGCCCTAAATCCCCAAATCCCACGCTCTCCGCCTCCCTCCGGCAATCGCTGTCCCAGCCGTCCAATGCCGAAGCTTCAAGCGTCGCTGCTTCTGCGCCGCCGGCGACTAGTAGCAGTAGTACTAGTAGTAGTAGTAGGGTTCGGATGGGAGAGAGAGGCGAGTGGGTGTCGACCAAGGGCAATTTCGTGAATTACTTGCCCCAAGATGAGGCTGTTGCCGCTGGCCTCGGCGCCGACGAAGGTGGATTGGACGCCGTGGAGTCTCAGAGAGTCGTCGATCTTCTCAATAGAGAGCTTTCTCGATTGCTCAAGCTAAACCCTAAGGAATTTTGGAGACAAGTGGCTAGTGATACTTCCCTGCATGAATTTTTGGAGAGCTTCCTACAGTTTCGTAGCAGGTGGTATGATTTCCCTCATCGCGGAGCCATGGACATGGTGGCAGGGGTCATTGTAGGGGAATTAGAACTGAGCCGCCGCGTTTTTATGGTATTGTATCGAATATCTTCTAACAGGGATCCTGGTGCTCGGGCTGCTGATAGTCTCAGTCCTAAAGACCATGAAGCTCTTTTGCAGGAGAAGAAGTTGCTTGACTTGCCTAAGTTGCTCGACATATGTGCTATATATAGTCATGAAAATGAAGATTTGACGAGAGTGCTGGTTGGCAATGCAGTGACAGCCCATGCTACAATCCGTGACAATTTGACTGCTGTGGCATCACATTTTCTGAGCATTGTACAAACAATGTATCAACGTAGTAGCACGGCATTAGAGGCCCTTTTTCTCTCTGGAAATCCTGGAGAACACGGATCCAGCCGTCTTCTTGCTGATTTACTGGAGGTTATGGACTTCATAAACGATGCAATTGTATCCATGGATGCTTTTCTAACTGCATACAAACCATCCGCAATATTCTTCTTGTGCCCTGTTGAGAAAAGTTATGGGAACGAGGAATTACTAAGCACTCTAGCAAGGTTGCATGATTCATTACTTCCATCTTTGCAGCGTGGGTTCCGAATAATTTTGGCAGCTGGAGAAGATAAAATGGTGTCAAATGTTGCTATCAGTTTGAAGATGTTATCAATGAGAATTGTCAAGTTTGGATGGAAACTGTTGGACTCATGCTATCTAAGTGATGAGGTATTCAAAGATAATCTCTCCATTCCTGCTGCTGCAGAGATGTTCCCAGCTAAACTAGAGGATCCTTATATTAGAGCGGACATTTTGGTTCAACTGTTGAGAGAGATTAATGGAATTTCAGTATGTGCTCAAGAAAACCAGAATAGGGAAACATTTCTTCAAAATGTTGAGAAGAACTTCAATATTATGGGCAAAGTGGAGAATTTACAAAATCACGGATGGATAATCATGGATGATGAGCAGTTGGGGTATGTATCTGGAATACTGATGTGTACTCAGAAGGTCATTGGTAAGTTGCACACCAATGCAACAACCCCTTTAACAAACAAGGTAGCGGTGGATGAAGATGTTGCAATTAAGGAGTCCAAGATTAGTCAAGTGAAGGATCTCTTCCCTGATTATGGAAAAGGGTTCTTAGCTGCCTGTCTTGAAGCATACAACCAGAATCCCGAGGAAGTGATTCAAAGGATTCTTGAAGGAACTCTTCACGAAGACCTGCTGTCCTTAGATACTAAATTAGAGACAATGCCAAAACCCAGAAGTGCTACTGTTAGTAGGAATGATAAAGGGAAAGGAATACTAGTTGAACCTACAGCATCCACCACTACTAATACAGTGGCTGCCATTAGGGTTCAACAAAATGGGGTCCCTTCAGTTTCATCATCATCTTCACAGGGAAGATTTGTTAGGAAGTCTAAAGCTGACTTGCCTGATTCTGATACACTTGATGACAAAAACGAAAAGTATTCAGCAAAAACTGCTGCCCTTGTTTCGCAATTTGAGTATGAAGATGAGTATGATGACTCTTTTGATGATCTAGGACTGAGTGTTGCGGATTCAGGAGCAGGGGAAATTGAGTCGTTCGGTGAAAAAAGCAGTTCAAATATTGGGAAACCTTGGGAGACACGAACTGAAAGTTCATCTCAGAATGCTACTAGTTCAAAATGGGGTTCCAGACGGAATCCCCAATATTATGTCAAAGATGGCAAGAATTATAGTTACAAAGTAGCAGGTTCAGTTGCAGTTGCAAATGTTGGTGAGGCATCGTTAATTACTGAAGCACAAAAAGAATTGATTCATGGTCTTGGTCGTGGCGGGAATCTTCCACTTGGTGCAGTTAAGAAGCTGACAGAGTACTCTGAGCAGCAAGATAGTCATGTAGATATTTCTCAGACTGAAGGGAGAGGGAGAGGGTATAATCAGAATTCCAGGGGCTGGGGCAGAGGAGGAGGAGGAGAAAGGAGAATTGAGGAGCAAGATAAGCACTTTGATAATTCTCAGACAGAAGGCAGAGGGAGAGGGTACATTCGGAATTCCAGAGGCCAGGGAAGAGGAGGAGAAAGAAGTCAAGGTGACTCAGGTGAGGAGCAAGATAACAAGCAAACTAGTGTTTCTGAAGTAGAAGGAAGAGAAAATGCAGGGAATCAGAGGGGAAGAGGGAGGAGAGGTGGGGGAGGAGGGAGGAGTAATAATTACAGGAAGGACCGAGCCATGAATAAACACTTTTCTAGTTTGGGTGGTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006307 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0099053 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CUE

Protein Analysis

926

Amino Acids

101.67

Weight (kDa)

6.15

Isoelectric Point (pI)

40.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CUE	PF02845	539 - 579	5.6e-12	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0007650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27752 AT1G27752
fragaria_vesca	FvH4_2g33210 FvH4_2g33210 FvH4_2g33210 FvH4_2g33210
malus_domestica	MD03G1160700.v1.1 MD08G1085900.v1.1 MD15G1071100.v1.1
prunus_persica	Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1
pyrus_communis	pycom08g07060 pycom15g06690
rosa_chinensis	RchiOBHm_Chr6g0309461
rosa_laevigata	RLG00000013072
rosa_multiflora	Rmu_sc0014034.1_g000003
rosa_rugosa	Rorug06G0372200
rosa_samantha	Rh6AG485300 Rh6BG494600 Rh6CG499600 Rh6DG485700
rosa_wichuraiana	Rw6G042270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	504
Acc36I	ACCTGC	3 cut(s)	504, 1758, 2255
AccB1I	GGYRCC	1 cut(s)	347
AccB7I	CCANNNNNTGG	1 cut(s)	2469
AccBSI	CCGCTC	1 cut(s)	1331
AccI	GTMKAC	1 cut(s)	287
AccII	CGCG	2 cut(s)	537, 594
AclWI	GGATC	7 cut(s)	626, 639, 918, 931, 1310, 1323, 1647
AcsI	RAATTY	6 cut(s)	443, 482, 1368, 1456, 2458, 2566
AcuI	CTGAAG	4 cut(s)	1890, 2331, 2451, 2670
AcyI	GRCGYC	2 cut(s)	348, 369
AdeI	CACNNNGTG	1 cut(s)	2366
AfaI	GTAC	5 cut(s)	238, 852, 1528, 2390, 2558
AfiI	CCNNNNNNNGG	6 cut(s)	156, 325, 536, 1399, 1655, 2469
AhdI	GACNNNNNGTC	1 cut(s)	1753
AhlI	ACTAGT	5 cut(s)	224, 239, 1834, 2189, 2639
AjnI	CCWGG	4 cut(s)	634, 910, 2462, 2577
AjuI	GAANNNNNNNTTGG	2 cut(s)	284, 316
Alw21I	GWGCWC	2 cut(s)	643, 1384
Alw26I	GTCTC	5 cut(s)	384, 445, 662, 1769, 2150
AlwI	GGATC	7 cut(s)	626, 639, 918, 931, 1310, 1323, 1647
AlwNI	CAGNNNCTG	2 cut(s)	1874, 2469
Ama87I	CYCGRG	2 cut(s)	642, 1703
AoxI	GGCC	3 cut(s)	340, 888, 2575
ApoI	RAATTY	6 cut(s)	443, 482, 1368, 1456, 2458, 2566
AseI	ATTAAT	1 cut(s)	1362
Asp700I	GAANNNNTTC	5 cut(s)	619, 1407, 1430, 1713, 2328
AspLEI	GCGC	2 cut(s)	214, 350
AspS9I	GGNCC	3 cut(s)	889, 1900, 2737
AsuHPI	GGTGA	5 cut(s)	55, 2132, 2303, 2618, 2627
AvaI	CYCGRG	2 cut(s)	642, 1703
AvaII	GGWCC	2 cut(s)	1900, 2737
AxyI	CCTNAGG	2 cut(s)	21, 438
BaeGI	GKGCMC	1 cut(s)	1040
BamHI	GGATCC	3 cut(s)	631, 923, 1315
BanI	GGYRCC	1 cut(s)	347
BbsI	GAAGAC	3 cut(s)	73, 926, 1752
Bbv12I	GWGCWC	2 cut(s)	643, 1384
BccI	CCATC	6 cut(s)	256, 1024, 1117, 1212, 1467, 2231
BceAI	ACGGC	4 cut(s)	160, 356, 894, 915
BcgI	CGANNNNNNTGC	2 cut(s)	713, 747
BciT130I	CCWGG	4 cut(s)	636, 912, 2464, 2579
BciVI	GTATCC	1 cut(s)	994
BcoDI	GTCTC	5 cut(s)	384, 445, 662, 1769, 2150
BcuI	ACTAGT	5 cut(s)	224, 239, 1834, 2189, 2639
BfmI	CTRYAG	3 cut(s)	500, 1287, 1845
BfoI	RGCGCY	1 cut(s)	351
BfuAI	ACCTGC	3 cut(s)	504, 1758, 2255
BfuI	GTATCC	1 cut(s)	994
BmcAI	AGTACT	2 cut(s)	238, 2390
Bme1390I	CCNGG	4 cut(s)	636, 912, 2464, 2579
Bme18I	GGWCC	2 cut(s)	1900, 2737
BmeRI	GACNNNNNGTC	1 cut(s)	1753
BmeT110I	CYCGRG	2 cut(s)	642, 1703
BmgT120I	GGNCC	3 cut(s)	889, 1900, 2737
BmrFI	CCNGG	4 cut(s)	636, 912, 2464, 2579
BmsI	GCATC	5 cut(s)	839, 964, 982, 1859, 2306
BpiI	GAAGAC	3 cut(s)	73, 926, 1752
BpmI	CTGGAG	3 cut(s)	933, 971, 1167
BpuEI	CTTGAG	2 cut(s)	410, 1368
BsaHI	GRCGYC	2 cut(s)	348, 369
BsaJI	CCNNGG	9 cut(s)	291, 343, 372, 543, 987, 1704, 2150, 2463, 2578
BsaWI	WCCGGW	1 cut(s)	12
BsaXI	ACNNNNNCTCC	4 cut(s)	683, 713, 2686, 2716
Bsc4I	CCNNNNNNNGG	6 cut(s)	156, 325, 536, 1399, 1655, 2469
Bse118I	RCCGGY	1 cut(s)	217
Bse1I	ACTGG	1 cut(s)	954
Bse21I	CCTNAGG	2 cut(s)	21, 438
Bse3DI	GCAATG	1 cut(s)	787
BseBI	CCWGG	4 cut(s)	636, 912, 2464, 2579
BseDI	CCNNGG	9 cut(s)	291, 343, 372, 543, 987, 1704, 2150, 2463, 2578
BseGI	GGATG	8 cut(s)	267, 997, 1016, 1223, 1478, 1492, 1600, 1850
BseLI	CCNNNNNNNGG	6 cut(s)	156, 325, 536, 1399, 1655, 2469
BseMI	GCAATG	1 cut(s)	787
BseNI	ACTGG	1 cut(s)	954
BseSI	GKGCMC	1 cut(s)	1040
BseYI	CCCAGC	3 cut(s)	171, 1300, 2469
BsgI	GTGCAG	1 cut(s)	2388
Bsh1236I	CGCG	2 cut(s)	537, 594
BshFI	GGCC	3 cut(s)	342, 890, 2577
BshNI	GGYRCC	1 cut(s)	347
BsiHKAI	GWGCWC	2 cut(s)	643, 1384
BsiHKCI	CYCGRG	2 cut(s)	642, 1703
BsiSI	CCGG	4 cut(s)	13, 45, 157, 218
BslFI	GGGAC	4 cut(s)	71, 96, 154, 1886
BslI	CCNNNNNNNGG	6 cut(s)	156, 325, 536, 1399, 1655, 2469
BsmAI	GTCTC	5 cut(s)	384, 445, 662, 1769, 2150
BsmFI	GGGAC	4 cut(s)	71, 96, 154, 1886
BsmI	GAATGC	1 cut(s)	2188
BsnI	GGCC	3 cut(s)	342, 890, 2577
BsoBI	CYCGRG	2 cut(s)	642, 1703
Bsp1286I	GDGCHC	3 cut(s)	643, 1040, 1384
Bsp1407I	TGTACA	1 cut(s)	850
Bsp143I	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
Bsp19I	CCATGG	2 cut(s)	543, 987
BspANI	GGCC	3 cut(s)	342, 890, 2577
BspFNI	CGCG	2 cut(s)	537, 594
BspHI	TCATGA	1 cut(s)	745
BspMAI	CTGCAG	1 cut(s)	1291
BspMI	ACCTGC	3 cut(s)	504, 1758, 2255
BspPI	GGATC	7 cut(s)	626, 639, 918, 931, 1310, 1323, 1647
BspT107I	GGYRCC	1 cut(s)	347
BsrBI	CCGCTC	1 cut(s)	1331
BsrDI	GCAATG	1 cut(s)	787
BsrFI	RCCGGY	1 cut(s)	217
BsrGI	TGTACA	1 cut(s)	850
BsrI	ACTGG	1 cut(s)	954
BssAI	RCCGGY	1 cut(s)	217
BssECI	CCNNGG	9 cut(s)	291, 343, 372, 543, 987, 1704, 2150, 2463, 2578
BssMI	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
BssNI	GRCGYC	2 cut(s)	348, 369
BssT1I	CCWWGG	4 cut(s)	291, 543, 987, 2150
Bst2UI	CCWGG	4 cut(s)	636, 912, 2464, 2579
Bst4CI	ACNGT	5 cut(s)	504, 1227, 1350, 1804, 1870
Bst6I	CTCTTC	5 cut(s)	1649, 1743, 2578, 2656, 2683
BstACI	GRCGYC	2 cut(s)	348, 369
BstAPI	GCANNNNNTGC	1 cut(s)	2012
BstAUI	TGTACA	1 cut(s)	850
BstC8I	GCNNGC	3 cut(s)	42, 219, 340
BstDSI	CCRYGG	3 cut(s)	372, 543, 987
BstF5I	GGATG	8 cut(s)	267, 997, 1016, 1223, 1478, 1492, 1600, 1850
BstFNI	CGCG	2 cut(s)	537, 594
BstH2I	RGCGCY	1 cut(s)	351
BstHHI	GCGC	2 cut(s)	214, 350
BstKTI	GATC	6 cut(s)	397, 634, 926, 1318, 1642, 2071
BstMAI	GTCTC	5 cut(s)	384, 445, 662, 1769, 2150
BstMBI	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
BstNI	CCWGG	4 cut(s)	636, 912, 2464, 2579
BstSCI	CCNGG	4 cut(s)	634, 910, 2462, 2577
BstSFI	CTRYAG	3 cut(s)	500, 1287, 1845
BstSLI	GKGCMC	1 cut(s)	1040
BstUI	CGCG	2 cut(s)	537, 594
BstV2I	GAAGAC	3 cut(s)	73, 926, 1752
BstX2I	RGATCY	4 cut(s)	631, 923, 1315, 1639
BstXI	CCANNNNNNTGG	1 cut(s)	550
BstYI	RGATCY	4 cut(s)	631, 923, 1315, 1639
Bsu36I	CCTNAGG	2 cut(s)	21, 438
BsuI	GTATCC	1 cut(s)	994
BsuRI	GGCC	3 cut(s)	342, 890, 2577
BtgI	CCRYGG	3 cut(s)	372, 543, 987
BtgZI	GCGATG	1 cut(s)	518
BtsCI	GGATG	8 cut(s)	267, 997, 1016, 1223, 1478, 1492, 1600, 1850
BtsI	GCAGTG	1 cut(s)	792
BtsIMutI	CAGTG	2 cut(s)	792, 1875
BveI	ACCTGC	3 cut(s)	504, 1758, 2255
Cac8I	GCNNGC	3 cut(s)	42, 219, 340
CaiI	CAGNNNCTG	2 cut(s)	1874, 2469
CciI	TCATGA	1 cut(s)	745
CfoI	GCGC	2 cut(s)	214, 350
Cfr10I	RCCGGY	1 cut(s)	217
Cfr13I	GGNCC	3 cut(s)	889, 1900, 2737
CseI	GACGC	2 cut(s)	187, 377
Csp6I	GTAC	5 cut(s)	237, 851, 1527, 2389, 2557
CviQI	GTAC	5 cut(s)	237, 851, 1527, 2389, 2557
DinI	GGCGCC	1 cut(s)	349
DpnI	GATC	6 cut(s)	396, 633, 925, 1317, 1641, 2070
DpnII	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
DraIII	CACNNNGTG	1 cut(s)	2366
DriI	GACNNNNNGTC	1 cut(s)	1753
Eam1104I	CTCTTC	5 cut(s)	1649, 1743, 2578, 2656, 2683
Eam1105I	GACNNNNNGTC	1 cut(s)	1753
EarI	CTCTTC	5 cut(s)	1649, 1743, 2578, 2656, 2683
EciI	GGCGGA	1 cut(s)	136
Eco130I	CCWWGG	4 cut(s)	291, 543, 987, 2150
Eco47I	GGWCC	2 cut(s)	1900, 2737
Eco57I	CTGAAG	4 cut(s)	1890, 2331, 2451, 2670
Eco81I	CCTNAGG	2 cut(s)	21, 438
Eco88I	CYCGRG	2 cut(s)	642, 1703
EcoO109I	RGGNCCY	2 cut(s)	889, 1900
EcoRI	GAATTC	2 cut(s)	2458, 2566
EcoRII	CCWGG	4 cut(s)	634, 910, 2462, 2577
EcoT14I	CCWWGG	4 cut(s)	291, 543, 987, 2150
EgeI	GGCGCC	1 cut(s)	349
EheI	GGCGCC	1 cut(s)	349
ErhI	CCWWGG	4 cut(s)	291, 543, 987, 2150
FalI	AAGNNNNNCTT	4 cut(s)	1628, 1660, 1722, 1754
FaqI	GGGAC	4 cut(s)	71, 96, 154, 1886
FauI	CCCGC	1 cut(s)	2342
FauNDI	CATATG	1 cut(s)	728
FblI	GTMKAC	1 cut(s)	287
FokI	GGATG	8 cut(s)	274, 1003, 1004, 1230, 1485, 1499, 1607, 1837
GlaI	GCGC	2 cut(s)	213, 349
GsaI	CCCAGC	3 cut(s)	175, 1304, 2473
GsuI	CTGGAG	3 cut(s)	933, 971, 1167
HaeII	RGCGCY	1 cut(s)	351
HaeIII	GGCC	3 cut(s)	342, 890, 2577
HapII	CCGG	4 cut(s)	13, 45, 157, 218
HgaI	GACGC	2 cut(s)	187, 377
HhaI	GCGC	2 cut(s)	214, 350
Hin1I	GRCGYC	2 cut(s)	348, 369
Hin6I	GCGC	2 cut(s)	212, 348
HinP1I	GCGC	2 cut(s)	212, 348
HincII	GTYRAC	1 cut(s)	288
HindII	GTYRAC	1 cut(s)	288
HindIII	AAGCTT	1 cut(s)	189
HpaII	CCGG	4 cut(s)	13, 45, 157, 218
HphI	GGTGA	5 cut(s)	55, 2132, 2303, 2618, 2627
Hpy166II	GTNNAC	2 cut(s)	288, 1527
Hpy8I	GTNNAC	2 cut(s)	288, 1527
Hpy99I	CGWCG	3 cut(s)	203, 356, 395
HpyAV	CCTTC	9 cut(s)	350, 1528, 1630, 1724, 1914, 2426, 2534, 2651, 2728
HpyCH4III	ACNGT	5 cut(s)	504, 1227, 1350, 1804, 1870
HpyCH4IV	ACGT	1 cut(s)	868
HpySE526I	ACGT	1 cut(s)	868
Hsp92I	GRCGYC	2 cut(s)	348, 369
HspAI	GCGC	2 cut(s)	212, 348
KasI	GGCGCC	1 cut(s)	347
KflI	GGGWCCC	1 cut(s)	1900
KroI	GCCGGC	1 cut(s)	217
KroNI	GCCGGC	1 cut(s)	219
Kzo9I	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
LmnI	GCTCC	4 cut(s)	539, 2096, 2506, 2620
LweI	GCATC	5 cut(s)	839, 964, 982, 1859, 2306
MaeII	ACGT	1 cut(s)	868
MaeIII	GTNAC	5 cut(s)	8, 787, 809, 2252, 2606
MalI	GATC	6 cut(s)	396, 633, 925, 1317, 1641, 2070
MbiI	CCGCTC	1 cut(s)	1331
MboI	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
MfeI	CAATTG	1 cut(s)	978
MflI	RGATCY	4 cut(s)	631, 923, 1315, 1639
MhlI	GDGCHC	3 cut(s)	643, 1040, 1384
Mly113I	GGCGCC	1 cut(s)	348
MlyI	GAGTC	8 cut(s)	16, 386, 396, 1226, 1625, 2051, 2120, 2603
MmeI	TCCRAC	1 cut(s)	1209
MreI	CGCCGGCG	1 cut(s)	217
MroNI	GCCGGC	1 cut(s)	217
MroXI	GAANNNNTTC	5 cut(s)	619, 1407, 1430, 1713, 2328
MseI	TTAA	5 cut(s)	1362, 1574, 1611, 2303, 2373
MslI	CAYNNNNRTG	3 cut(s)	548, 750, 1557
MspA1I	CMGCKG	2 cut(s)	338, 1145
MspI	CCGG	4 cut(s)	13, 45, 157, 218
MspR9I	CCNGG	4 cut(s)	636, 912, 2464, 2579
MunI	CAATTG	1 cut(s)	978
Mva1269I	GAATGC	1 cut(s)	2188
MvaI	CCWGG	4 cut(s)	636, 912, 2464, 2579
MvnI	CGCG	2 cut(s)	537, 594
NaeI	GCCGGC	1 cut(s)	219
NarI	GGCGCC	1 cut(s)	348
NcoI	CCATGG	2 cut(s)	543, 987
NdeI	CATATG	1 cut(s)	728
NdeII	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
NgoMIV	GCCGGC	1 cut(s)	217
NmeAIII	GCCGAG	1 cut(s)	324
NmuCI	GTSAC	4 cut(s)	8, 787, 809, 2606
PagI	TCATGA	1 cut(s)	745
PaqCI	CACCTGC	1 cut(s)	504
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PctI	GAATGC	1 cut(s)	2188
PdiI	GCCGGC	1 cut(s)	219
PdmI	GAANNNNTTC	5 cut(s)	619, 1407, 1430, 1713, 2328
PflMI	CCANNNNNTGG	1 cut(s)	2469
PfoI	TCCNGGA	1 cut(s)	910
PleI	GAGTC	8 cut(s)	15, 385, 395, 1226, 1624, 2051, 2119, 2603
PluTI	GGCGCC	1 cut(s)	351
PpsI	GAGTC	8 cut(s)	15, 385, 395, 1226, 1624, 2051, 2119, 2603
PpuMI	RGGWCCY	1 cut(s)	1900
PshBI	ATTAAT	1 cut(s)	1362
Psp5II	RGGWCCY	1 cut(s)	1900
Psp6I	CCWGG	4 cut(s)	634, 910, 2462, 2577
PspFI	CCCAGC	3 cut(s)	171, 1300, 2469
PspGI	CCWGG	4 cut(s)	634, 910, 2462, 2577
PspPI	GGNCC	3 cut(s)	889, 1900, 2737
PspPPI	RGGWCCY	1 cut(s)	1900
PstI	CTGCAG	1 cut(s)	1291
PstNI	CAGNNNCTG	2 cut(s)	1874, 2469
PsuI	RGATCY	4 cut(s)	631, 923, 1315, 1639
PvuII	CAGCTG	1 cut(s)	1145
RsaI	GTAC	5 cut(s)	238, 852, 1528, 2390, 2558
RsaNI	GTAC	5 cut(s)	237, 851, 1527, 2389, 2557
RseI	CAYNNNNRTG	3 cut(s)	548, 750, 1557
SalI	GTCGAC	1 cut(s)	286
SaqAI	TTAA	5 cut(s)	1362, 1574, 1611, 2303, 2373
Sau3AI	GATC	6 cut(s)	394, 631, 923, 1315, 1639, 2068
Sau96I	GGNCC	3 cut(s)	889, 1900, 2737
ScaI	AGTACT	2 cut(s)	238, 2390
SchI	GAGTC	8 cut(s)	16, 386, 396, 1226, 1625, 2051, 2120, 2603
ScrFI	CCNGG	4 cut(s)	636, 912, 2464, 2579
SduI	GDGCHC	3 cut(s)	643, 1040, 1384
SfaNI	GCATC	5 cut(s)	839, 964, 982, 1859, 2306
SfcI	CTRYAG	3 cut(s)	500, 1287, 1845
SfoI	GGCGCC	1 cut(s)	349
SgrAI	CRCCGGYG	1 cut(s)	217
SinI	GGWCC	2 cut(s)	1900, 2737
SmiMI	CAYNNNNRTG	3 cut(s)	548, 750, 1557
SmlI	CTYRAG	2 cut(s)	425, 1383
SmoI	CTYRAG	2 cut(s)	425, 1383
SpeI	ACTAGT	5 cut(s)	224, 239, 1834, 2189, 2639
SspDI	GGCGCC	1 cut(s)	347
SspI	AATATT	4 cut(s)	1026, 1438, 2140, 2225
StyD4I	CCNGG	4 cut(s)	634, 910, 2462, 2577
StyI	CCWWGG	4 cut(s)	291, 543, 987, 2150
TaaI	ACNGT	5 cut(s)	504, 1227, 1350, 1804, 1870
TaiI	ACGT	1 cut(s)	871
TaqI	TCGA	6 cut(s)	5, 287, 393, 418, 613, 723
TaqII	GACCGA	1 cut(s)	2754
TatI	WGTACW	4 cut(s)	236, 850, 1526, 2388
TauI	GCSGC	4 cut(s)	217, 338, 591, 594
Tru1I	TTAA	5 cut(s)	1362, 1574, 1611, 2303, 2373
Tru9I	TTAA	5 cut(s)	1362, 1574, 1611, 2303, 2373
TscAI	CASTG	2 cut(s)	792, 1875
TseFI	GTSAC	4 cut(s)	8, 787, 809, 2606
Tsp45I	GTSAC	4 cut(s)	8, 787, 809, 2606
TspGWI	ACGGA	4 cut(s)	797, 936, 1485, 2227
TspRI	CASTG	2 cut(s)	792, 1875
Van91I	CCANNNNNTGG	1 cut(s)	2469
VpaK11BI	GGWCC	2 cut(s)	1900, 2737
VspI	ATTAAT	1 cut(s)	1362
XapI	RAATTY	6 cut(s)	443, 482, 1368, 1456, 2458, 2566
XcmI	CCANNNNNNNNNTGG	1 cut(s)	550
XmiI	GTMKAC	1 cut(s)	287
XmnI	GAANNNNTTC	5 cut(s)	619, 1407, 1430, 1713, 2328
ZrmI	AGTACT	2 cut(s)	238, 2390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.