Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0007650

Physical Location & Seq

Genomic Coordinates Forward (+)

66373858 .. 66378734

Gene Structure 4877 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG499600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGTCGAGTCACCGGAACCCTCAGGGCAACACTAATAGGCAAGCCGGAGGAAGCAAGGGTTTCACCAAAACCCAAAAGGTCTTCGTCCCCAAAAATCAAGACCAGAATCGTCCCAGAAGCCCTAAATCCCCAAATCCCACGCTCTCCGCCTCCCTCCGGCAATCGCTGTCCCACCCGTCCAATGCCGAAGCTTCAAGCGTCGCTGCTTCTGCGCCGCCGGCGACTAGCAGTAGTACTAGTAGTAGTAGGGTTCGGATGGGAGAGAGAGGCGAGTGGGTGTCGACCAAGGGCAATTTCGTGAATTACTTGCCCCAAGATGAGGCTGTTGCCGCTGGCCTCGGCGCCGACGAAGGTGGATTGGACGCCGTGGAGTCTCAGAGAGTCGTCGATCTTCTCAATAGAGAGCTTTCTCGATTGCTCAAGCTAAACCCTAAGGTATTTTGGAGACAAGTGGCTAGTGATACTTCCCTGCATGAATTTTTGGAGAGCTTCCTACAGTTTCGTAGCAGGTGGTATGATTTCCCTCATCGCGGAGCCAAGGACATGGTGGCAGGGGTCATTGTAGGGGAATTAGAACTGAGCCGCCGCGTTTTTATGGTATTGTATCGAATATCTTCTAACAGGGATCCTGGTGCTCGGGCTGCTGATAGTCTCAGTCCTAAAGACCATGAAGCTCTTTTGCAGGAGAAGAAGTTGCTTGACTTGCCTAAGTTGCTCGACATATGTGCTATATATAGTCATGAAAATGAAGATTTGACGAGAGTGCTGGTTGGCAATGCAGTGACAGCCCATGCTACAATCCGTGACAATTTGACTGCTGTGGCATCACATTTTCTGAGCATTGTACAAACAATGTATCAACGTAGTAGCACGGCATTAGAGGCCCTTTTTCTCTCTGGAAATCCTGGAGAACACGGATCCAGCCGTCTTCTTGCTGATTTACTGGAGGTTATGGACTTCATAAACGATGCAATTGTATCCATGGATGCTTTTCTAACTGCATACAAACCATCCGCAATATTCTTCTTGTGCCCTGTTGAGAAAAGTTATGGGAACGAGGAATTACTAAGCACTCTAGCAAGGTTGCATGATTCATTACTTCCATCTTTGCAGCGTGGGTTCCGAATAATTTTGGCAGCTGGAGAAGATAAAATGGTGTCAAATGTTGCTATCAGTTTGAAGATGTTATCAATGAGAATTGTCAAGTTTGGATGGAAACTGTTGGACTCATGCTATCTAAGTGATGAGGTATTCAAAGATAATCTCTCCATTCCTGCTGCTGCAGAGATGTTCCCAGCTAAACTAGAGGATCCTTATATTAGAGCGGACATTTTGGTTCAACTGTTGAGAGAGATTAATGGAATTTCAGTATGTGCTCAAGAAAACCAGAATAGGGAAACATTTCTTCAAAATGTTGAGAAGAACTTCAATATTATGGGCAAAGTGGAGAATTTACAAAATCACGGATGGATAATCATGGATGATGAGCAGTTGGGGTATGTATCTGGAATACTGATGTGTACTCAGAAGGTCATTGGTAAGTTGCACACCAATGCAACAACCCCTTTAACAAACAAGGTAGCGGTGGATGAAGATGTTGCAATTAAGGAGTCCAAGATTAGTCAAGTGAAGGATCTCTTCCCTGATTATGGAAAAGGGTTCTTAGCTGCCTGTCTTGAAGCATACAACCAGAATCCCGAGGAAGTGATTCAAAGGATTCTTGAAGGAACTCTTCACGAAGACCTGCTGTCCTTAGATACTAAATTAGAGACAATGCCAAAACCCAGAAGTGCTACTGTTAGTAGGAATGATAAAGGGAAAGGAATACTAGTTGAACCTACAGCATCCACCACTACTAATACAGTGGCTGCCATTAGGGTTCAACAAAATGGGGTCCCTTCAGTTTCATCATCATCTTCACAGGGAAGATTTGTTAGGAAGTCTAAAGCTGACTTGCCTGATTCTGATACACTTGATGACAAAAACGAAAAGTATTCAGCAAAAACTGCTGCCCTTGTTTCGCAATTTGAGTATGAAGATGAGTATGATGACTCTTTTGATGATCTAGGACTGAGTGTTGCGGATTCAGGAGCAGGGGAAATTGAGTCGTTCGGTGAAAAAAGCAGTTCAAATATTGGGAAACCTTGGGAGACACGAACTGAAAGTTCATCTCAGAATGCTACTAGTTCAAAATGGGGTTCCAGACGGAATCCCCAATATTATGTCAAAGATGGCAAGAATTATAGTTACAAAGTAGCAGGTTCAGTTGCAGTTGCAAATGTTGGTGAGGCATCGTTAATTACTGAAGCACAAAAAGAATTGATTCATGGTCTTGGTCGTGGCGGGAATCTTCCACTTGGTGCAGTTAAGAAGCTGACAGAGTACTCTGAGCAGCAAGATAGTCATGTAGATATTTCTCAGACTGAAGGGAGAGGGAGAGGGTATAATCAGAATTCCAGGGGCTGGGGCAGAGGAGGAGGAGGAGAAAGGAGAATTGAGGAGCAAGATAAGCACTTTGATAATTCTCAGACAGAAGGCAGAGGGAGAGGGTACATTCGGAATTCCAGAGGCCAGGGAAGAGGAGGAGAAAGAAGTCAAGGTGACTCAGGTGAGGAGCAAGATAACAAGCAAACTAGTGTTTCTGAAGTAGAAGGAAGAGAAAATGCAGGGAATCAGAGGGGAAGAGGGAGGAGAGGTGGGGGAGGAGGGAGGAGTAATAATTACAGGAAGGACCGAGCCATGAATAAACACTTTTCTAGTTTGGGTGGTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006307 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0099053 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CUE

Protein Analysis

924

Amino Acids

101.47

Weight (kDa)

6.35

Isoelectric Point (pI)

39.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CUE	PF02845	537 - 577	5.6e-12	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27752 AT1G27752
fragaria_vesca	FvH4_2g33210 FvH4_2g33210 FvH4_2g33210 FvH4_2g33210
malus_domestica	MD03G1160700.v1.1 MD08G1085900.v1.1 MD15G1071100.v1.1
prunus_persica	Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1
pyrus_communis	pycom08g07060 pycom15g06690
rosa_chinensis	RchiOBHm_Chr6g0309461
rosa_laevigata	RLG00000013072
rosa_multiflora	Rmu_sc0014034.1_g000003
rosa_rugosa	Rorug06G0372200
rosa_samantha	Rh6AG485300 Rh6BG494600 Rh6CG499600 Rh6DG485700
rosa_wichuraiana	Rw6G042270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	498
Acc36I	ACCTGC	3 cut(s)	498, 1752, 2249
AccB1I	GGYRCC	1 cut(s)	341
AccB7I	CCANNNNNTGG	1 cut(s)	2463
AccBSI	CCGCTC	1 cut(s)	1325
AccI	GTMKAC	1 cut(s)	281
AccII	CGCG	2 cut(s)	531, 588
AclWI	GGATC	7 cut(s)	620, 633, 912, 925, 1304, 1317, 1641
AcsI	RAATTY	5 cut(s)	476, 1362, 1450, 2452, 2560
AcuI	CTGAAG	4 cut(s)	1884, 2325, 2445, 2664
AcyI	GRCGYC	2 cut(s)	342, 363
AdeI	CACNNNGTG	1 cut(s)	2360
AfaI	GTAC	5 cut(s)	235, 846, 1522, 2384, 2552
AfiI	CCNNNNNNNGG	6 cut(s)	156, 319, 530, 1393, 1649, 2463
AhdI	GACNNNNNGTC	1 cut(s)	1747
AhlI	ACTAGT	4 cut(s)	236, 1828, 2183, 2633
AjnI	CCWGG	4 cut(s)	628, 904, 2456, 2571
AjuI	GAANNNNNNNTTGG	2 cut(s)	278, 310
Alw21I	GWGCWC	2 cut(s)	637, 1378
Alw26I	GTCTC	5 cut(s)	378, 439, 656, 1763, 2144
AlwI	GGATC	7 cut(s)	620, 633, 912, 925, 1304, 1317, 1641
AlwNI	CAGNNNCTG	2 cut(s)	1868, 2463
Ama87I	CYCGRG	2 cut(s)	636, 1697
AoxI	GGCC	3 cut(s)	334, 882, 2569
ApoI	RAATTY	5 cut(s)	476, 1362, 1450, 2452, 2560
AseI	ATTAAT	1 cut(s)	1356
Asp700I	GAANNNNTTC	5 cut(s)	613, 1401, 1424, 1707, 2322
AspLEI	GCGC	2 cut(s)	214, 344
AspS9I	GGNCC	3 cut(s)	883, 1894, 2731
AsuHPI	GGTGA	5 cut(s)	55, 2126, 2297, 2612, 2621
AvaI	CYCGRG	2 cut(s)	636, 1697
AvaII	GGWCC	2 cut(s)	1894, 2731
AxyI	CCTNAGG	2 cut(s)	21, 432
BaeGI	GKGCMC	1 cut(s)	1034
BamHI	GGATCC	3 cut(s)	625, 917, 1309
BanI	GGYRCC	1 cut(s)	341
BbsI	GAAGAC	3 cut(s)	73, 920, 1746
Bbv12I	GWGCWC	2 cut(s)	637, 1378
BccI	CCATC	6 cut(s)	250, 1018, 1111, 1206, 1461, 2225
BceAI	ACGGC	3 cut(s)	350, 888, 909
BcgI	CGANNNNNNTGC	2 cut(s)	707, 741
BciT130I	CCWGG	4 cut(s)	630, 906, 2458, 2573
BciVI	GTATCC	1 cut(s)	988
BcoDI	GTCTC	5 cut(s)	378, 439, 656, 1763, 2144
BcuI	ACTAGT	4 cut(s)	236, 1828, 2183, 2633
BfmI	CTRYAG	3 cut(s)	494, 1281, 1839
BfoI	RGCGCY	1 cut(s)	345
BfuAI	ACCTGC	3 cut(s)	498, 1752, 2249
BfuI	GTATCC	1 cut(s)	988
BmcAI	AGTACT	2 cut(s)	235, 2384
Bme1390I	CCNGG	4 cut(s)	630, 906, 2458, 2573
Bme18I	GGWCC	2 cut(s)	1894, 2731
BmeRI	GACNNNNNGTC	1 cut(s)	1747
BmeT110I	CYCGRG	2 cut(s)	636, 1697
BmgT120I	GGNCC	3 cut(s)	883, 1894, 2731
BmrFI	CCNGG	4 cut(s)	630, 906, 2458, 2573
BmsI	GCATC	5 cut(s)	833, 958, 976, 1853, 2300
BpiI	GAAGAC	3 cut(s)	73, 920, 1746
BpmI	CTGGAG	3 cut(s)	927, 965, 1161
BpuEI	CTTGAG	2 cut(s)	404, 1362
BsaHI	GRCGYC	2 cut(s)	342, 363
BsaJI	CCNNGG	9 cut(s)	285, 337, 366, 537, 981, 1698, 2144, 2457, 2572
BsaWI	WCCGGW	1 cut(s)	12
BsaXI	ACNNNNNCTCC	4 cut(s)	677, 707, 2680, 2710
Bsc4I	CCNNNNNNNGG	6 cut(s)	156, 319, 530, 1393, 1649, 2463
Bse118I	RCCGGY	1 cut(s)	217
Bse1I	ACTGG	1 cut(s)	948
Bse21I	CCTNAGG	2 cut(s)	21, 432
Bse3DI	GCAATG	1 cut(s)	781
BseBI	CCWGG	4 cut(s)	630, 906, 2458, 2573
BseDI	CCNNGG	9 cut(s)	285, 337, 366, 537, 981, 1698, 2144, 2457, 2572
BseGI	GGATG	8 cut(s)	261, 991, 1010, 1217, 1472, 1486, 1594, 1844
BseLI	CCNNNNNNNGG	6 cut(s)	156, 319, 530, 1393, 1649, 2463
BseMI	GCAATG	1 cut(s)	781
BseNI	ACTGG	1 cut(s)	948
BseSI	GKGCMC	1 cut(s)	1034
BseYI	CCCAGC	2 cut(s)	1294, 2463
BsgI	GTGCAG	1 cut(s)	2382
Bsh1236I	CGCG	2 cut(s)	531, 588
BshFI	GGCC	3 cut(s)	336, 884, 2571
BshNI	GGYRCC	1 cut(s)	341
BsiHKAI	GWGCWC	2 cut(s)	637, 1378
BsiHKCI	CYCGRG	2 cut(s)	636, 1697
BsiSI	CCGG	4 cut(s)	13, 45, 157, 218
BslFI	GGGAC	4 cut(s)	71, 96, 154, 1880
BslI	CCNNNNNNNGG	6 cut(s)	156, 319, 530, 1393, 1649, 2463
BsmAI	GTCTC	5 cut(s)	378, 439, 656, 1763, 2144
BsmFI	GGGAC	4 cut(s)	71, 96, 154, 1880
BsmI	GAATGC	1 cut(s)	2182
BsnI	GGCC	3 cut(s)	336, 884, 2571
BsoBI	CYCGRG	2 cut(s)	636, 1697
Bsp1286I	GDGCHC	3 cut(s)	637, 1034, 1378
Bsp1407I	TGTACA	1 cut(s)	844
Bsp143I	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
Bsp19I	CCATGG	1 cut(s)	981
BspANI	GGCC	3 cut(s)	336, 884, 2571
BspFNI	CGCG	2 cut(s)	531, 588
BspHI	TCATGA	1 cut(s)	739
BspMAI	CTGCAG	1 cut(s)	1285
BspMI	ACCTGC	3 cut(s)	498, 1752, 2249
BspPI	GGATC	7 cut(s)	620, 633, 912, 925, 1304, 1317, 1641
BspT107I	GGYRCC	1 cut(s)	341
BsrBI	CCGCTC	1 cut(s)	1325
BsrDI	GCAATG	1 cut(s)	781
BsrFI	RCCGGY	1 cut(s)	217
BsrGI	TGTACA	1 cut(s)	844
BsrI	ACTGG	1 cut(s)	948
BssAI	RCCGGY	1 cut(s)	217
BssECI	CCNNGG	9 cut(s)	285, 337, 366, 537, 981, 1698, 2144, 2457, 2572
BssMI	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
BssNI	GRCGYC	2 cut(s)	342, 363
BssT1I	CCWWGG	4 cut(s)	285, 537, 981, 2144
Bst2UI	CCWGG	4 cut(s)	630, 906, 2458, 2573
Bst4CI	ACNGT	5 cut(s)	498, 1221, 1344, 1798, 1864
Bst6I	CTCTTC	5 cut(s)	1643, 1737, 2572, 2650, 2677
BstACI	GRCGYC	2 cut(s)	342, 363
BstAPI	GCANNNNNTGC	1 cut(s)	2006
BstAUI	TGTACA	1 cut(s)	844
BstC8I	GCNNGC	3 cut(s)	42, 219, 334
BstDSI	CCRYGG	2 cut(s)	366, 981
BstF5I	GGATG	8 cut(s)	261, 991, 1010, 1217, 1472, 1486, 1594, 1844
BstFNI	CGCG	2 cut(s)	531, 588
BstH2I	RGCGCY	1 cut(s)	345
BstHHI	GCGC	2 cut(s)	214, 344
BstKTI	GATC	6 cut(s)	391, 628, 920, 1312, 1636, 2065
BstMAI	GTCTC	5 cut(s)	378, 439, 656, 1763, 2144
BstMBI	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
BstNI	CCWGG	4 cut(s)	630, 906, 2458, 2573
BstSCI	CCNGG	4 cut(s)	628, 904, 2456, 2571
BstSFI	CTRYAG	3 cut(s)	494, 1281, 1839
BstSLI	GKGCMC	1 cut(s)	1034
BstUI	CGCG	2 cut(s)	531, 588
BstV2I	GAAGAC	3 cut(s)	73, 920, 1746
BstX2I	RGATCY	4 cut(s)	625, 917, 1309, 1633
BstXI	CCANNNNNNTGG	1 cut(s)	544
BstYI	RGATCY	4 cut(s)	625, 917, 1309, 1633
Bsu36I	CCTNAGG	2 cut(s)	21, 432
BsuI	GTATCC	1 cut(s)	988
BsuRI	GGCC	3 cut(s)	336, 884, 2571
BtgI	CCRYGG	2 cut(s)	366, 981
BtgZI	GCGATG	1 cut(s)	512
BtsCI	GGATG	8 cut(s)	261, 991, 1010, 1217, 1472, 1486, 1594, 1844
BtsI	GCAGTG	1 cut(s)	786
BtsIMutI	CAGTG	2 cut(s)	786, 1869
BveI	ACCTGC	3 cut(s)	498, 1752, 2249
Cac8I	GCNNGC	3 cut(s)	42, 219, 334
CaiI	CAGNNNCTG	2 cut(s)	1868, 2463
CciI	TCATGA	1 cut(s)	739
CfoI	GCGC	2 cut(s)	214, 344
Cfr10I	RCCGGY	1 cut(s)	217
Cfr13I	GGNCC	3 cut(s)	883, 1894, 2731
CseI	GACGC	2 cut(s)	187, 371
Csp6I	GTAC	5 cut(s)	234, 845, 1521, 2383, 2551
CviQI	GTAC	5 cut(s)	234, 845, 1521, 2383, 2551
DinI	GGCGCC	1 cut(s)	343
DpnI	GATC	6 cut(s)	390, 627, 919, 1311, 1635, 2064
DpnII	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
DraIII	CACNNNGTG	1 cut(s)	2360
DriI	GACNNNNNGTC	1 cut(s)	1747
Eam1104I	CTCTTC	5 cut(s)	1643, 1737, 2572, 2650, 2677
Eam1105I	GACNNNNNGTC	1 cut(s)	1747
EarI	CTCTTC	5 cut(s)	1643, 1737, 2572, 2650, 2677
EciI	GGCGGA	1 cut(s)	136
Eco130I	CCWWGG	4 cut(s)	285, 537, 981, 2144
Eco47I	GGWCC	2 cut(s)	1894, 2731
Eco57I	CTGAAG	4 cut(s)	1884, 2325, 2445, 2664
Eco81I	CCTNAGG	2 cut(s)	21, 432
Eco88I	CYCGRG	2 cut(s)	636, 1697
EcoO109I	RGGNCCY	2 cut(s)	883, 1894
EcoRI	GAATTC	2 cut(s)	2452, 2560
EcoRII	CCWGG	4 cut(s)	628, 904, 2456, 2571
EcoT14I	CCWWGG	4 cut(s)	285, 537, 981, 2144
EgeI	GGCGCC	1 cut(s)	343
EheI	GGCGCC	1 cut(s)	343
ErhI	CCWWGG	4 cut(s)	285, 537, 981, 2144
FalI	AAGNNNNNCTT	4 cut(s)	1622, 1654, 1716, 1748
FaqI	GGGAC	4 cut(s)	71, 96, 154, 1880
FauI	CCCGC	1 cut(s)	2336
FauNDI	CATATG	1 cut(s)	722
FblI	GTMKAC	1 cut(s)	281
FokI	GGATG	8 cut(s)	268, 997, 998, 1224, 1479, 1493, 1601, 1831
GlaI	GCGC	2 cut(s)	213, 343
GsaI	CCCAGC	2 cut(s)	1298, 2467
GsuI	CTGGAG	3 cut(s)	927, 965, 1161
HaeII	RGCGCY	1 cut(s)	345
HaeIII	GGCC	3 cut(s)	336, 884, 2571
HapII	CCGG	4 cut(s)	13, 45, 157, 218
HgaI	GACGC	2 cut(s)	187, 371
HhaI	GCGC	2 cut(s)	214, 344
Hin1I	GRCGYC	2 cut(s)	342, 363
Hin6I	GCGC	2 cut(s)	212, 342
HinP1I	GCGC	2 cut(s)	212, 342
HincII	GTYRAC	1 cut(s)	282
HindII	GTYRAC	1 cut(s)	282
HindIII	AAGCTT	1 cut(s)	189
HpaII	CCGG	4 cut(s)	13, 45, 157, 218
HphI	GGTGA	5 cut(s)	55, 2126, 2297, 2612, 2621
Hpy166II	GTNNAC	2 cut(s)	282, 1521
Hpy8I	GTNNAC	2 cut(s)	282, 1521
Hpy99I	CGWCG	3 cut(s)	203, 350, 389
HpyAV	CCTTC	9 cut(s)	344, 1522, 1624, 1718, 1908, 2420, 2528, 2645, 2722
HpyCH4III	ACNGT	5 cut(s)	498, 1221, 1344, 1798, 1864
HpyCH4IV	ACGT	1 cut(s)	862
HpySE526I	ACGT	1 cut(s)	862
Hsp92I	GRCGYC	2 cut(s)	342, 363
HspAI	GCGC	2 cut(s)	212, 342
KasI	GGCGCC	1 cut(s)	341
KflI	GGGWCCC	1 cut(s)	1894
KroI	GCCGGC	1 cut(s)	217
KroNI	GCCGGC	1 cut(s)	219
Kzo9I	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
LmnI	GCTCC	4 cut(s)	533, 2090, 2500, 2614
LweI	GCATC	5 cut(s)	833, 958, 976, 1853, 2300
MaeII	ACGT	1 cut(s)	862
MaeIII	GTNAC	5 cut(s)	8, 781, 803, 2246, 2600
MalI	GATC	6 cut(s)	390, 627, 919, 1311, 1635, 2064
MbiI	CCGCTC	1 cut(s)	1325
MboI	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	4 cut(s)	625, 917, 1309, 1633
MhlI	GDGCHC	3 cut(s)	637, 1034, 1378
Mly113I	GGCGCC	1 cut(s)	342
MlyI	GAGTC	8 cut(s)	16, 380, 390, 1220, 1619, 2045, 2114, 2597
MmeI	TCCRAC	1 cut(s)	1203
MreI	CGCCGGCG	1 cut(s)	217
MroNI	GCCGGC	1 cut(s)	217
MroXI	GAANNNNTTC	5 cut(s)	613, 1401, 1424, 1707, 2322
MseI	TTAA	5 cut(s)	1356, 1568, 1605, 2297, 2367
MslI	CAYNNNNRTG	2 cut(s)	744, 1551
MspA1I	CMGCKG	2 cut(s)	332, 1139
MspI	CCGG	4 cut(s)	13, 45, 157, 218
MspR9I	CCNGG	4 cut(s)	630, 906, 2458, 2573
MunI	CAATTG	1 cut(s)	972
Mva1269I	GAATGC	1 cut(s)	2182
MvaI	CCWGG	4 cut(s)	630, 906, 2458, 2573
MvnI	CGCG	2 cut(s)	531, 588
NaeI	GCCGGC	1 cut(s)	219
NarI	GGCGCC	1 cut(s)	342
NcoI	CCATGG	1 cut(s)	981
NdeI	CATATG	1 cut(s)	722
NdeII	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
NgoMIV	GCCGGC	1 cut(s)	217
NmeAIII	GCCGAG	1 cut(s)	318
NmuCI	GTSAC	4 cut(s)	8, 781, 803, 2600
PagI	TCATGA	1 cut(s)	739
PaqCI	CACCTGC	1 cut(s)	498
PcsI	WCGNNNNNNNCGW	1 cut(s)	345
PctI	GAATGC	1 cut(s)	2182
PdiI	GCCGGC	1 cut(s)	219
PdmI	GAANNNNTTC	5 cut(s)	613, 1401, 1424, 1707, 2322
PflMI	CCANNNNNTGG	1 cut(s)	2463
PfoI	TCCNGGA	1 cut(s)	904
PleI	GAGTC	8 cut(s)	15, 379, 389, 1220, 1618, 2045, 2113, 2597
PluTI	GGCGCC	1 cut(s)	345
PpsI	GAGTC	8 cut(s)	15, 379, 389, 1220, 1618, 2045, 2113, 2597
PpuMI	RGGWCCY	1 cut(s)	1894
PshBI	ATTAAT	1 cut(s)	1356
Psp5II	RGGWCCY	1 cut(s)	1894
Psp6I	CCWGG	4 cut(s)	628, 904, 2456, 2571
PspFI	CCCAGC	2 cut(s)	1294, 2463
PspGI	CCWGG	4 cut(s)	628, 904, 2456, 2571
PspPI	GGNCC	3 cut(s)	883, 1894, 2731
PspPPI	RGGWCCY	1 cut(s)	1894
PstI	CTGCAG	1 cut(s)	1285
PstNI	CAGNNNCTG	2 cut(s)	1868, 2463
PsuI	RGATCY	4 cut(s)	625, 917, 1309, 1633
PvuII	CAGCTG	1 cut(s)	1139
RsaI	GTAC	5 cut(s)	235, 846, 1522, 2384, 2552
RsaNI	GTAC	5 cut(s)	234, 845, 1521, 2383, 2551
RseI	CAYNNNNRTG	2 cut(s)	744, 1551
SalI	GTCGAC	1 cut(s)	280
SaqAI	TTAA	5 cut(s)	1356, 1568, 1605, 2297, 2367
Sau3AI	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
Sau96I	GGNCC	3 cut(s)	883, 1894, 2731
ScaI	AGTACT	2 cut(s)	235, 2384
SchI	GAGTC	8 cut(s)	16, 380, 390, 1220, 1619, 2045, 2114, 2597
ScrFI	CCNGG	4 cut(s)	630, 906, 2458, 2573
SduI	GDGCHC	3 cut(s)	637, 1034, 1378
SfaNI	GCATC	5 cut(s)	833, 958, 976, 1853, 2300
SfcI	CTRYAG	3 cut(s)	494, 1281, 1839
SfoI	GGCGCC	1 cut(s)	343
SgrAI	CRCCGGYG	1 cut(s)	217
SinI	GGWCC	2 cut(s)	1894, 2731
SmiMI	CAYNNNNRTG	2 cut(s)	744, 1551
SmlI	CTYRAG	2 cut(s)	419, 1377
SmoI	CTYRAG	2 cut(s)	419, 1377
SpeI	ACTAGT	4 cut(s)	236, 1828, 2183, 2633
SspDI	GGCGCC	1 cut(s)	341
SspI	AATATT	4 cut(s)	1020, 1432, 2134, 2219
StyD4I	CCNGG	4 cut(s)	628, 904, 2456, 2571
StyI	CCWWGG	4 cut(s)	285, 537, 981, 2144
TaaI	ACNGT	5 cut(s)	498, 1221, 1344, 1798, 1864
TaiI	ACGT	1 cut(s)	865
TaqI	TCGA	6 cut(s)	5, 281, 387, 412, 607, 717
TaqII	GACCGA	1 cut(s)	2748
TatI	WGTACW	4 cut(s)	233, 844, 1520, 2382
TauI	GCSGC	4 cut(s)	217, 332, 585, 588
Tru1I	TTAA	5 cut(s)	1356, 1568, 1605, 2297, 2367
Tru9I	TTAA	5 cut(s)	1356, 1568, 1605, 2297, 2367
TscAI	CASTG	2 cut(s)	786, 1869
TseFI	GTSAC	4 cut(s)	8, 781, 803, 2600
Tsp45I	GTSAC	4 cut(s)	8, 781, 803, 2600
TspGWI	ACGGA	4 cut(s)	791, 930, 1479, 2221
TspRI	CASTG	2 cut(s)	786, 1869
Van91I	CCANNNNNTGG	1 cut(s)	2463
VpaK11BI	GGWCC	2 cut(s)	1894, 2731
VspI	ATTAAT	1 cut(s)	1356
XapI	RAATTY	5 cut(s)	476, 1362, 1450, 2452, 2560
XcmI	CCANNNNNNNNNTGG	1 cut(s)	544
XmiI	GTMKAC	1 cut(s)	281
XmnI	GAANNNNTTC	5 cut(s)	613, 1401, 1424, 1707, 2322
ZrmI	AGTACT	2 cut(s)	235, 2384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.