Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007650

Physical Location & Seq

Genomic Coordinates Forward (+)

65778618 .. 65783760

Gene Structure 5143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G042270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2772 bp

ATGTCGAGTCACCGGAACCCTCAGGGCAACACTAATAGGCAAGCCGGAGGAAGCAAGGGTTTCACCAAAACCCAAAAGGTCTTCGTCCCCAAAAATCAAGACCAGAATCGTCCCAGAAGCCCTAAATCCCTAAACCCCACGCTCTCCGCCTCCCTCCGGCAATCGCTTTCCCAGCCGTCCAATGCCGAAGCTTCAAGCGTCGCTGCTTCTGCGCCGCCGGCGAGTAGCAGTAGTACTAGTAGTAGGGTTCGGATGGGAGAGAGAGGCGAGTGGGTGTCGGCCAAGGGCAATTTCGTGAATTACTTGCCCCAAGATGAGGCTGTTGCCGCTGGCCTCGGCGCCGACGAAGGTGGATTGGACGCCGTGGAGTCTCAGAGAGTCGTCGATCTTCTCAATAGAGAGCTTTCTCGATTGCTCAAGCTAAACCCTAAGGAATTTTGGAGACAAGTGGCTAGTGATACTTCCCTGCATGAATTTTTGGAGAGCTTCCTACAGTTTCGTAGCAGGTGGCATGATTTCCCTCATCGCGGAGCCCAGGACATGGTGGCAGGGGTCATTGTAGGGGAATTAGAACTGAGCCGCCGCGCTTTTATGGTATTGTATCGAATATCTTCTAACAGGGATCCTGGTGCTCGGGCTGCTGATAGTCTCAGTCCTAAAGACCATGAAGCTCTTTTGCAGGAGAAGAAGTTGCTTGACTTGCCCAAGTTGCTCGACATATGTGCTATATATAGTCATGAAAATGAAGATTTGACGAGAGTGCTGGTTGGCAATGCAGTGACAGCCCATGCTACAATCCGTGACAATTTGACTGCTGTGGCATCACATTTTCTGAGCATTGTACAAACAATGTATCAACGTAGTAGCACAGCATTAGAGGCCCTTTTTCTGTCTGGAAATCCTGGAGAACACGGATCCAGCCGTCTTCTTGCTGATTTACTGGAGGTTATGGACTTCATAAACGATGCAATTGTATCCATGGATGCTTTTCTAACTGCATACAAACCATCCGCAATATTCTTCTTGTGCCCTGTTGAGAAAAGTTATGGGAACGAGGAATTACTAAGCACTCTAGCAAGGTTGCATGATTCATTACTTCCATCTTTGCAGCGTGGGTTCCGAATAATTTTGGCAGCTGGAGAACATAAAATGGTGTCAAATGTTTCTATAAGTTTGAAGATGTTATCAATGAGAATTGTCAAGTTTGGATGGAAACTGTTGGACTCATGCTATCTAAGTGATGAGGTATTCAAAGATAATCTCTCCATTCCTGATGCTGCAGAGATGTTCCCAGCTAAACTAGAGGATCCTTATATTAGAGCGGACATTTTGGTTCAACTGTTGAGAGAGATTAATGGAATTTCAGTATGTGCTCAAGAAAACCAGAATAGGGAAACATTTCTTCAAAATGTTGAGAAGAACTTCAATATTATGGGCAAAGTGGAGAATTTACAAAATCACGGATGGATAATCATGGATGATGAGCAGTTGGGGTATGTATCTGGAATACTGATGTGTACTCAGAAGGTCATTGGTAAGTTGCACACCAATGCAACAACCCCTTTAACAAACAAGGTAGCGGTGGATGAAGATGTTGCAATTAAGGAGTCCAAGATTAGTCAAGTGAAGGATCTCTTCCCTGATTATGGAAAAGGGTTCTTAGCTGCCTGTCTTGAAGCATACAACCAGAATCCCGAGGAAGTGATTCAAATGATTCTTGAAGGAACTCTTCATGAAGACCTGCTGTCCTTAGATACTAAATTAGAGACAATGCCAAAACCCAGAAGTGCTACTGTTAGTAGGAATGATAAAGGGAAAGGAATACTAGTTGAACCTACAGCATCCACCACTACTAATACAGTGGCTGCCATTAGGGTTCAACAAAATGGGGTCCCTTCAGTTTCATCATCATCTTCACAGGGAAGATTTGTTAGGAAGTCTAAAGCTGACTTGCCTGATTCTGATACACTTGATGACAAAAACGAAAAGTATTCAGCAAAAACTGCTGCCCTTGTTTCGCAATTTGAGTATGAAGATGAGTATGATGACTCTTTTGATGATCTAGGACTGAGTGTTGCGGATTCAGGAGCAGGGGAAATTGAGTCGTTCGGTGAAAAAAGCAGTTCAAATATTGGGAAACCTTGGGAGACACGAACTGAAAGTTCATCTCAGAATGCTACTAGTTCAAAATGGGGTTCCAGACGGAATCCCCAATATTATGTCAAAGATGGCAAGAATTATAGTTACAAAGTAGCAGGTTCAGTTGCAGTTGCAAATGTGGGTGAGGCATCGTTAATTACTGAAGCACAAAAAGAACTGATTCATGGTCTTGGTCGTGGCGGCAATCTTCCACTTGGTGCAGTTAAGAAGCTGACAGAGTACTCTGAGCAGCAAGATAGTCATGTAGATATTTCTCAGAATGAAGGTAGAGGGAAAGGGTATAATCAGAATTCCAGGGGCTGGGGCAGAGGAGGAGGAGGAGAAAGGAGAATTGAGGAGCAAGATAAGCACTTTGATAATTCTCGGACAGAAGGGAGAGGGAGAGGGTACATTCGGAATTCCAGAGGCCGGGGAAGAGGAGGAGAAAGAAGTCAAGGTGACTCAGGTGAGGAGCAAGATAACAAGCAAACTAGTGTTTCTGAAGTAGAAGGAAGAGAAAATGCAGGGAATCAGAGGGGAAGAGGGAGGAGAGGTGGGGGAGGAGGGAGGAGTAATAATTACAGGAAGGACCGAGCCATGAATAAGCACTTTTCTAGTTTGCGTGGTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006307 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0099053 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CUE

Protein Analysis

923

Amino Acids

101.52

Weight (kDa)

6.37

Isoelectric Point (pI)

39.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CUE	PF02845	536 - 576	1.2e-11	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27752 AT1G27752
fragaria_vesca	FvH4_2g33210 FvH4_2g33210 FvH4_2g33210 FvH4_2g33210
malus_domestica	MD03G1160700.v1.1 MD08G1085900.v1.1 MD15G1071100.v1.1
prunus_persica	Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1
pyrus_communis	pycom08g07060 pycom15g06690
rosa_chinensis	RchiOBHm_Chr6g0309461
rosa_laevigata	RLG00000013072
rosa_multiflora	Rmu_sc0014034.1_g000003
rosa_rugosa	Rorug06G0372200
rosa_samantha	Rh6AG485300 Rh6BG494600 Rh6CG499600 Rh6DG485700
rosa_wichuraiana	Rw6G042270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	495
Acc36I	ACCTGC	3 cut(s)	495, 1749, 2246
AccB1I	GGYRCC	1 cut(s)	338
AccB7I	CCANNNNNTGG	2 cut(s)	541, 2460
AccBSI	CCGCTC	1 cut(s)	1322
AccII	CGCG	2 cut(s)	528, 585
AclWI	GGATC	7 cut(s)	617, 630, 909, 922, 1301, 1314, 1638
AcoI	YGGCCR	1 cut(s)	279
AcsI	RAATTY	6 cut(s)	434, 473, 1359, 1447, 2449, 2557
AcuI	CTGAAG	3 cut(s)	1881, 2322, 2661
AcyI	GRCGYC	2 cut(s)	339, 360
AdeI	CACNNNGTG	1 cut(s)	2357
AfaI	GTAC	5 cut(s)	235, 843, 1519, 2381, 2549
AfiI	CCNNNNNNNGG	8 cut(s)	156, 316, 527, 541, 1390, 1646, 2460, 2568
AhdI	GACNNNNNGTC	1 cut(s)	1744
AhlI	ACTAGT	4 cut(s)	236, 1825, 2180, 2630
AjnI	CCWGG	4 cut(s)	534, 625, 901, 2453
AjuI	GAANNNNNNNTTGG	2 cut(s)	275, 307
Alw21I	GWGCWC	2 cut(s)	634, 1375
Alw26I	GTCTC	5 cut(s)	375, 436, 653, 1760, 2141
AlwI	GGATC	7 cut(s)	617, 630, 909, 922, 1301, 1314, 1638
AlwNI	CAGNNNCTG	2 cut(s)	1865, 2460
Ama87I	CYCGRG	2 cut(s)	633, 1694
AoxI	GGCC	4 cut(s)	279, 331, 879, 2566
ApeKI	GCWGC	9 cut(s)	203, 638, 1108, 1133, 1277, 1664, 1865, 2006, 2389
ApoI	RAATTY	6 cut(s)	434, 473, 1359, 1447, 2449, 2557
AseI	ATTAAT	1 cut(s)	1353
Asp700I	GAANNNNTTC	5 cut(s)	610, 1398, 1421, 1704, 2319
AspLEI	GCGC	3 cut(s)	214, 341, 587
AspS9I	GGNCC	3 cut(s)	880, 1891, 2728
AsuC2I	CCSGG	1 cut(s)	2570
AsuHPI	GGTGA	5 cut(s)	55, 2123, 2294, 2609, 2618
AvaI	CYCGRG	2 cut(s)	633, 1694
AvaII	GGWCC	2 cut(s)	1891, 2728
AxyI	CCTNAGG	2 cut(s)	21, 429
BaeGI	GKGCMC	1 cut(s)	1031
BamHI	GGATCC	3 cut(s)	622, 914, 1306
BanI	GGYRCC	1 cut(s)	338
BanII	GRGCYC	1 cut(s)	535
BbsI	GAAGAC	3 cut(s)	73, 917, 1743
Bbv12I	GWGCWC	2 cut(s)	634, 1375
BbvI	GCAGC	9 cut(s)	190, 625, 1120, 1145, 1264, 1651, 1852, 1993, 2401
BccI	CCATC	6 cut(s)	247, 1015, 1108, 1203, 1458, 2222
BceAI	ACGGC	3 cut(s)	160, 347, 906
BcgI	CGANNNNNNTGC	2 cut(s)	704, 738
BciT130I	CCWGG	4 cut(s)	536, 627, 903, 2455
BciVI	GTATCC	1 cut(s)	985
BcnI	CCSGG	1 cut(s)	2570
BcoDI	GTCTC	5 cut(s)	375, 436, 653, 1760, 2141
BcuI	ACTAGT	4 cut(s)	236, 1825, 2180, 2630
BfmI	CTRYAG	3 cut(s)	491, 1278, 1836
BfoI	RGCGCY	1 cut(s)	342
BfuAI	ACCTGC	3 cut(s)	495, 1749, 2246
BfuI	GTATCC	1 cut(s)	985
BmcAI	AGTACT	2 cut(s)	235, 2381
Bme1390I	CCNGG	5 cut(s)	536, 627, 903, 2455, 2570
Bme18I	GGWCC	2 cut(s)	1891, 2728
BmeRI	GACNNNNNGTC	1 cut(s)	1744
BmeT110I	CYCGRG	2 cut(s)	633, 1694
BmgT120I	GGNCC	3 cut(s)	880, 1891, 2728
BmrFI	CCNGG	5 cut(s)	536, 627, 903, 2455, 2570
BmsI	GCATC	6 cut(s)	830, 955, 973, 1264, 1850, 2297
BpiI	GAAGAC	3 cut(s)	73, 917, 1743
BpmI	CTGGAG	3 cut(s)	924, 962, 1158
BpuEI	CTTGAG	2 cut(s)	401, 1359
BpuMI	CCSGG	1 cut(s)	2570
BsaHI	GRCGYC	2 cut(s)	339, 360
BsaJI	CCNNGG	9 cut(s)	282, 334, 363, 534, 978, 1695, 2141, 2454, 2569
BsaWI	WCCGGW	1 cut(s)	12
BsaXI	ACNNNNNCTCC	4 cut(s)	674, 704, 2677, 2707
Bsc4I	CCNNNNNNNGG	8 cut(s)	156, 316, 527, 541, 1390, 1646, 2460, 2568
Bse118I	RCCGGY	1 cut(s)	217
Bse1I	ACTGG	1 cut(s)	945
Bse21I	CCTNAGG	2 cut(s)	21, 429
Bse3DI	GCAATG	1 cut(s)	778
BseBI	CCWGG	4 cut(s)	536, 627, 903, 2455
BseDI	CCNNGG	9 cut(s)	282, 334, 363, 534, 978, 1695, 2141, 2454, 2569
BseGI	GGATG	8 cut(s)	258, 988, 1007, 1214, 1469, 1483, 1591, 1841
BseLI	CCNNNNNNNGG	8 cut(s)	156, 316, 527, 541, 1390, 1646, 2460, 2568
BseMI	GCAATG	1 cut(s)	778
BseNI	ACTGG	1 cut(s)	945
BseSI	GKGCMC	1 cut(s)	1031
BseXI	GCAGC	9 cut(s)	190, 625, 1120, 1145, 1264, 1651, 1852, 1993, 2401
BseYI	CCCAGC	3 cut(s)	171, 1291, 2460
BsgI	GTGCAG	1 cut(s)	2379
Bsh1236I	CGCG	2 cut(s)	528, 585
BshFI	GGCC	4 cut(s)	281, 333, 881, 2568
BshNI	GGYRCC	1 cut(s)	338
BsiHKAI	GWGCWC	2 cut(s)	634, 1375
BsiHKCI	CYCGRG	2 cut(s)	633, 1694
BsiSI	CCGG	5 cut(s)	13, 45, 157, 218, 2569
BslFI	GGGAC	3 cut(s)	71, 96, 1877
BslI	CCNNNNNNNGG	8 cut(s)	156, 316, 527, 541, 1390, 1646, 2460, 2568
BsmAI	GTCTC	5 cut(s)	375, 436, 653, 1760, 2141
BsmFI	GGGAC	3 cut(s)	71, 96, 1877
BsmI	GAATGC	1 cut(s)	2179
BsnI	GGCC	4 cut(s)	281, 333, 881, 2568
BsoBI	CYCGRG	2 cut(s)	633, 1694
Bsp1286I	GDGCHC	4 cut(s)	535, 634, 1031, 1375
Bsp1407I	TGTACA	1 cut(s)	841
Bsp143I	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
Bsp19I	CCATGG	1 cut(s)	978
BspANI	GGCC	4 cut(s)	281, 333, 881, 2568
BspFNI	CGCG	2 cut(s)	528, 585
BspHI	TCATGA	2 cut(s)	736, 1732
BspMAI	CTGCAG	1 cut(s)	1282
BspMI	ACCTGC	3 cut(s)	495, 1749, 2246
BspPI	GGATC	7 cut(s)	617, 630, 909, 922, 1301, 1314, 1638
BspT107I	GGYRCC	1 cut(s)	338
BsrBI	CCGCTC	1 cut(s)	1322
BsrDI	GCAATG	1 cut(s)	778
BsrFI	RCCGGY	1 cut(s)	217
BsrGI	TGTACA	1 cut(s)	841
BsrI	ACTGG	1 cut(s)	945
BssAI	RCCGGY	1 cut(s)	217
BssECI	CCNNGG	9 cut(s)	282, 334, 363, 534, 978, 1695, 2141, 2454, 2569
BssMI	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
BssNI	GRCGYC	2 cut(s)	339, 360
BssT1I	CCWWGG	3 cut(s)	282, 978, 2141
Bst2UI	CCWGG	4 cut(s)	536, 627, 903, 2455
Bst4CI	ACNGT	5 cut(s)	495, 1218, 1341, 1795, 1861
Bst6I	CTCTTC	5 cut(s)	1640, 1734, 2569, 2647, 2674
BstACI	GRCGYC	2 cut(s)	339, 360
BstAPI	GCANNNNNTGC	1 cut(s)	2003
BstAUI	TGTACA	1 cut(s)	841
BstC8I	GCNNGC	3 cut(s)	42, 219, 331
BstDSI	CCRYGG	2 cut(s)	363, 978
BstF5I	GGATG	8 cut(s)	258, 988, 1007, 1214, 1469, 1483, 1591, 1841
BstFNI	CGCG	2 cut(s)	528, 585
BstH2I	RGCGCY	1 cut(s)	342
BstHHI	GCGC	3 cut(s)	214, 341, 587
BstKTI	GATC	6 cut(s)	388, 625, 917, 1309, 1633, 2062
BstMAI	GTCTC	5 cut(s)	375, 436, 653, 1760, 2141
BstMBI	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
BstNI	CCWGG	4 cut(s)	536, 627, 903, 2455
BstSCI	CCNGG	5 cut(s)	534, 625, 901, 2453, 2568
BstSFI	CTRYAG	3 cut(s)	491, 1278, 1836
BstSLI	GKGCMC	1 cut(s)	1031
BstUI	CGCG	2 cut(s)	528, 585
BstV1I	GCAGC	9 cut(s)	190, 625, 1120, 1145, 1264, 1651, 1852, 1993, 2401
BstV2I	GAAGAC	3 cut(s)	73, 917, 1743
BstX2I	RGATCY	4 cut(s)	622, 914, 1306, 1630
BstYI	RGATCY	4 cut(s)	622, 914, 1306, 1630
Bsu36I	CCTNAGG	2 cut(s)	21, 429
BsuI	GTATCC	1 cut(s)	985
BsuRI	GGCC	4 cut(s)	281, 333, 881, 2568
BtgI	CCRYGG	2 cut(s)	363, 978
BtgZI	GCGATG	1 cut(s)	509
BtsCI	GGATG	8 cut(s)	258, 988, 1007, 1214, 1469, 1483, 1591, 1841
BtsI	GCAGTG	1 cut(s)	783
BtsIMutI	CAGTG	2 cut(s)	783, 1866
BveI	ACCTGC	3 cut(s)	495, 1749, 2246
Cac8I	GCNNGC	3 cut(s)	42, 219, 331
CaiI	CAGNNNCTG	2 cut(s)	1865, 2460
CciI	TCATGA	2 cut(s)	736, 1732
CfoI	GCGC	3 cut(s)	214, 341, 587
Cfr10I	RCCGGY	1 cut(s)	217
Cfr13I	GGNCC	3 cut(s)	880, 1891, 2728
CseI	GACGC	2 cut(s)	187, 368
Csp6I	GTAC	5 cut(s)	234, 842, 1518, 2380, 2548
CviQI	GTAC	5 cut(s)	234, 842, 1518, 2380, 2548
DinI	GGCGCC	1 cut(s)	340
DpnI	GATC	6 cut(s)	387, 624, 916, 1308, 1632, 2061
DpnII	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
DraIII	CACNNNGTG	1 cut(s)	2357
DriI	GACNNNNNGTC	1 cut(s)	1744
EaeI	YGGCCR	1 cut(s)	279
Eam1104I	CTCTTC	5 cut(s)	1640, 1734, 2569, 2647, 2674
Eam1105I	GACNNNNNGTC	1 cut(s)	1744
EarI	CTCTTC	5 cut(s)	1640, 1734, 2569, 2647, 2674
EciI	GGCGGA	1 cut(s)	136
Eco130I	CCWWGG	3 cut(s)	282, 978, 2141
Eco24I	GRGCYC	1 cut(s)	535
Eco47I	GGWCC	2 cut(s)	1891, 2728
Eco57I	CTGAAG	3 cut(s)	1881, 2322, 2661
Eco81I	CCTNAGG	2 cut(s)	21, 429
Eco88I	CYCGRG	2 cut(s)	633, 1694
EcoO109I	RGGNCCY	2 cut(s)	880, 1891
EcoRI	GAATTC	2 cut(s)	2449, 2557
EcoRII	CCWGG	4 cut(s)	534, 625, 901, 2453
EcoT14I	CCWWGG	3 cut(s)	282, 978, 2141
EcoT38I	GRGCYC	1 cut(s)	535
EgeI	GGCGCC	1 cut(s)	340
EheI	GGCGCC	1 cut(s)	340
ErhI	CCWWGG	3 cut(s)	282, 978, 2141
FalI	AAGNNNNNCTT	4 cut(s)	1619, 1651, 1713, 1745
FaqI	GGGAC	3 cut(s)	71, 96, 1877
FauNDI	CATATG	1 cut(s)	719
FokI	GGATG	8 cut(s)	265, 994, 995, 1221, 1476, 1490, 1598, 1828
FriOI	GRGCYC	1 cut(s)	535
GlaI	GCGC	3 cut(s)	213, 340, 586
GsaI	CCCAGC	3 cut(s)	175, 1295, 2464
GsuI	CTGGAG	3 cut(s)	924, 962, 1158
HaeII	RGCGCY	1 cut(s)	342
HaeIII	GGCC	4 cut(s)	281, 333, 881, 2568
HapII	CCGG	5 cut(s)	13, 45, 157, 218, 2569
HgaI	GACGC	2 cut(s)	187, 368
HhaI	GCGC	3 cut(s)	214, 341, 587
Hin1I	GRCGYC	2 cut(s)	339, 360
Hin6I	GCGC	3 cut(s)	212, 339, 585
HinP1I	GCGC	3 cut(s)	212, 339, 585
HindIII	AAGCTT	1 cut(s)	189
HpaII	CCGG	5 cut(s)	13, 45, 157, 218, 2569
HphI	GGTGA	5 cut(s)	55, 2123, 2294, 2609, 2618
Hpy166II	GTNNAC	1 cut(s)	1518
Hpy8I	GTNNAC	1 cut(s)	1518
Hpy99I	CGWCG	3 cut(s)	203, 347, 386
HpyAV	CCTTC	9 cut(s)	341, 1519, 1621, 1715, 1905, 2417, 2525, 2642, 2719
HpyCH4III	ACNGT	5 cut(s)	495, 1218, 1341, 1795, 1861
HpyCH4IV	ACGT	1 cut(s)	859
HpySE526I	ACGT	1 cut(s)	859
Hsp92I	GRCGYC	2 cut(s)	339, 360
HspAI	GCGC	3 cut(s)	212, 339, 585
KasI	GGCGCC	1 cut(s)	338
KflI	GGGWCCC	1 cut(s)	1891
KroI	GCCGGC	1 cut(s)	217
KroNI	GCCGGC	1 cut(s)	219
Kzo9I	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
LmnI	GCTCC	4 cut(s)	530, 2087, 2497, 2611
Lsp1109I	GCAGC	9 cut(s)	190, 625, 1120, 1145, 1264, 1651, 1852, 1993, 2401
LweI	GCATC	6 cut(s)	830, 955, 973, 1264, 1850, 2297
MaeII	ACGT	1 cut(s)	859
MaeIII	GTNAC	5 cut(s)	8, 778, 800, 2243, 2597
MalI	GATC	6 cut(s)	387, 624, 916, 1308, 1632, 2061
MbiI	CCGCTC	1 cut(s)	1322
MboI	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
MfeI	CAATTG	1 cut(s)	969
MflI	RGATCY	4 cut(s)	622, 914, 1306, 1630
MhlI	GDGCHC	4 cut(s)	535, 634, 1031, 1375
Mly113I	GGCGCC	1 cut(s)	339
MlyI	GAGTC	8 cut(s)	16, 377, 387, 1217, 1616, 2042, 2111, 2594
MmeI	TCCRAC	1 cut(s)	1200
MreI	CGCCGGCG	1 cut(s)	217
MroNI	GCCGGC	1 cut(s)	217
MroXI	GAANNNNTTC	5 cut(s)	610, 1398, 1421, 1704, 2319
MseI	TTAA	5 cut(s)	1353, 1565, 1602, 2294, 2364
MslI	CAYNNNNRTG	2 cut(s)	741, 1548
MspA1I	CMGCKG	2 cut(s)	329, 1136
MspI	CCGG	5 cut(s)	13, 45, 157, 218, 2569
MspR9I	CCNGG	5 cut(s)	536, 627, 903, 2455, 2570
MunI	CAATTG	1 cut(s)	969
Mva1269I	GAATGC	1 cut(s)	2179
MvaI	CCWGG	4 cut(s)	536, 627, 903, 2455
MvnI	CGCG	2 cut(s)	528, 585
NaeI	GCCGGC	1 cut(s)	219
NarI	GGCGCC	1 cut(s)	339
NciI	CCSGG	1 cut(s)	2570
NcoI	CCATGG	1 cut(s)	978
NdeI	CATATG	1 cut(s)	719
NdeII	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
NgoMIV	GCCGGC	1 cut(s)	217
NmeAIII	GCCGAG	1 cut(s)	315
NmuCI	GTSAC	4 cut(s)	8, 778, 800, 2597
PagI	TCATGA	2 cut(s)	736, 1732
PaqCI	CACCTGC	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	1 cut(s)	342
PctI	GAATGC	1 cut(s)	2179
PdiI	GCCGGC	1 cut(s)	219
PdmI	GAANNNNTTC	5 cut(s)	610, 1398, 1421, 1704, 2319
PflMI	CCANNNNNTGG	2 cut(s)	541, 2460
PfoI	TCCNGGA	1 cut(s)	901
PleI	GAGTC	8 cut(s)	15, 376, 386, 1217, 1615, 2042, 2110, 2594
PluTI	GGCGCC	1 cut(s)	342
PpsI	GAGTC	8 cut(s)	15, 376, 386, 1217, 1615, 2042, 2110, 2594
PpuMI	RGGWCCY	1 cut(s)	1891
PshBI	ATTAAT	1 cut(s)	1353
Psp5II	RGGWCCY	1 cut(s)	1891
Psp6I	CCWGG	4 cut(s)	534, 625, 901, 2453
PspFI	CCCAGC	3 cut(s)	171, 1291, 2460
PspGI	CCWGG	4 cut(s)	534, 625, 901, 2453
PspPI	GGNCC	3 cut(s)	880, 1891, 2728
PspPPI	RGGWCCY	1 cut(s)	1891
PstI	CTGCAG	1 cut(s)	1282
PstNI	CAGNNNCTG	2 cut(s)	1865, 2460
PsuI	RGATCY	4 cut(s)	622, 914, 1306, 1630
PvuII	CAGCTG	1 cut(s)	1136
RsaI	GTAC	5 cut(s)	235, 843, 1519, 2381, 2549
RsaNI	GTAC	5 cut(s)	234, 842, 1518, 2380, 2548
RseI	CAYNNNNRTG	2 cut(s)	741, 1548
SaqAI	TTAA	5 cut(s)	1353, 1565, 1602, 2294, 2364
Sau3AI	GATC	6 cut(s)	385, 622, 914, 1306, 1630, 2059
Sau96I	GGNCC	3 cut(s)	880, 1891, 2728
ScaI	AGTACT	2 cut(s)	235, 2381
SchI	GAGTC	8 cut(s)	16, 377, 387, 1217, 1616, 2042, 2111, 2594
ScrFI	CCNGG	5 cut(s)	536, 627, 903, 2455, 2570
SduI	GDGCHC	4 cut(s)	535, 634, 1031, 1375
SfaNI	GCATC	6 cut(s)	830, 955, 973, 1264, 1850, 2297
SfcI	CTRYAG	3 cut(s)	491, 1278, 1836
SfoI	GGCGCC	1 cut(s)	340
SgrAI	CRCCGGYG	1 cut(s)	217
SinI	GGWCC	2 cut(s)	1891, 2728
SmiMI	CAYNNNNRTG	2 cut(s)	741, 1548
SmlI	CTYRAG	2 cut(s)	416, 1374
SmoI	CTYRAG	2 cut(s)	416, 1374
SpeI	ACTAGT	4 cut(s)	236, 1825, 2180, 2630
SspDI	GGCGCC	1 cut(s)	338
SspI	AATATT	4 cut(s)	1017, 1429, 2131, 2216
StyD4I	CCNGG	5 cut(s)	534, 625, 901, 2453, 2568
StyI	CCWWGG	3 cut(s)	282, 978, 2141
TaaI	ACNGT	5 cut(s)	495, 1218, 1341, 1795, 1861
TaiI	ACGT	1 cut(s)	862
TaqI	TCGA	5 cut(s)	5, 384, 409, 604, 714
TaqII	GACCGA	1 cut(s)	2745
TatI	WGTACW	4 cut(s)	233, 841, 1517, 2379
TauI	GCSGC	5 cut(s)	217, 329, 582, 585, 2343
Tru1I	TTAA	5 cut(s)	1353, 1565, 1602, 2294, 2364
Tru9I	TTAA	5 cut(s)	1353, 1565, 1602, 2294, 2364
TscAI	CASTG	2 cut(s)	783, 1866
TseFI	GTSAC	4 cut(s)	8, 778, 800, 2597
TseI	GCWGC	9 cut(s)	203, 638, 1108, 1133, 1277, 1664, 1865, 2006, 2389
Tsp45I	GTSAC	4 cut(s)	8, 778, 800, 2597
TspGWI	ACGGA	4 cut(s)	788, 927, 1476, 2218
TspRI	CASTG	2 cut(s)	783, 1866
Van91I	CCANNNNNTGG	2 cut(s)	541, 2460
VpaK11BI	GGWCC	2 cut(s)	1891, 2728
VspI	ATTAAT	1 cut(s)	1353
XapI	RAATTY	6 cut(s)	434, 473, 1359, 1447, 2449, 2557
XmnI	GAANNNNTTC	5 cut(s)	610, 1398, 1421, 1704, 2319
ZrmI	AGTACT	2 cut(s)	235, 2381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.