Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0007650

Physical Location & Seq

Genomic Coordinates Forward (+)

64783522 .. 64788729

Gene Structure 5208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG485700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

ATGTCGAGTCACCGGAACCCTCAGGGCAACACTAATAGGCAAGCCGGAGGAAGCAAGGGTTTCACCAAAACCCAAAAGGTCTTCGTCCCCAAAAATCAAGACCAGAATCGTCCCAGAAGCCCTAAATCCCCAAATCCCACGCTCTCCGCCTCCCTCCGGCAATCGCTGTCCCAGCCGTCCAATGCCGAAGCTTCAAGCGTCGCTGCTTCTGCGCCGCCGGCGAGTAGCAGTAGTACTAGTAGGGTTCGGATGGGAGAGAGAGGCGAGTGGGTGTCGACCAAGGGCAATTTCGTGAATTACTTGCCCCAAGATGAGGCTGTTGCCGCTGGCCTCGGCGCCGACGAAGGTGGATTGGACGCCGTGGAGTCTCAGAGAGTCGTCGATCTTCTCAATAGAGAGCTTTCTCGATTGCTCAAGCTAAACCCTAAGGAATTTTGGAGACAAGTGGCTAGTGATACTTCCCTGCATGAATTTTTGGAGAGCTTCCTACAGTTTCGTAGCAGGTGGTATGATTTCCCTCATCGCGGAGCCAAGGACATGGTGGCAGGGGTCATTGTAGGGGAATTAGAACTGAGCCGCCGCGTTTTTATGGTATTGTATCGAATATCTTCTAACAGGGATCCTGGTGCTCGGGCTGCTGATAGTCTCAGTCCTAAAGACCATGAAGCTCTTTTGCAGGAGAAGAAGTTGCTTGACTTGCCTAAGTTGCTCGACATATGTGCTATATATAGTCATGAAAATGAAGATTTGACGAGAGTGCTGGTTGGCAATGCAGTGACAGCCCATGCTACAATCCGTGACAATTTGACTGCTGTGGCATCACATTTTCTGAGCATTGTACAAACAATGTATCAACGTAGTAGCACGGCATTAGAGGCCCTTTTTCTCTCTGGAAATCCTGGAGAACACGGATCCAGCCGTCTTCTTGCTGATTTACTGGAGGTTATGGACTTCATAAACGATGCAATTGTATCCATGGATGCTTTTCTAACTGCATACAAGCCATCCGCAATATTCTTCTTGTGCCCTGTTGAGAAAAGTTATGGGAACGAGGAATTACTAAGCACTCTAGCAAGGTTGCATGATTCATTACTTCCATCTTTGCAGCGTGGGTTCCGAATAATTTTGGCAGCAGGAGAAGATAAAATGGTGTCAAATGTTGCTATAAGTTTGAAGATGTTATCAATGAGAATTGTCAAGTTTGGATGGAAACTGTTGGACTCATGCTATCTAAGTGATGAGGTATTCAAAGATAATCTCTCCATTCCTGCTGCTGCAGAGATGTTCCCAGCTAAACTAGAGGATCCTTATATTAGAGCGGACATTTTGGTTCAACTGTTGAGAGAGATTAATGGAATTTCAGTATGTGCTCAAGAAAACCAGAATAGGGAAACATTTCTTCAAAATGTTGAGAAGAACTTCAATATTATGGGCAAAGTGGAGAATTTACAAAATCACGGATGGATAATCATGGATGATGAGCAGTTGGGGTATGTATCTGGAATACTGATGTGTACTCAGAAGGTCATTGGTAAGTTGCACACCAATGCAACAACCCCTTTAACAAACAAGGTAGCGGTGGATGAAGATGTTGCAATTAAGGAGTCCAAGATTAGTCAAGTGAAGGATCTCTTCCCTGATTATGGAAAAGGGTTCTTAGCTGCCTGTCTTGAAGCATACAACCAGAATCCCGAGGAAGTGATTCAAAGGATTCTTGAAGGAACTCTTCATGAAGACCTGCTGTCCTTAGATACTAAATTAGAGACAATGCCAAAACCCAGAAGTGCTACTGTTAGTAGGAATGATAAAGGGAAAGGAATACTAGTTGAACCTACAGTATCCACCACTACTAATACAGTGGCTGCCATTAGGGTTCAACAAAATGGGGTCCCTTCAGTTTCATCATCATCTTCACAGGGAAGATTTGTTAGGAAGTCTAAAGCTGACTTGCCTGATTCTGATACACTTGATGACAAAAACGAAAAGTATTCAGCAAAAACTGCTGCCCTTGTTTCGCAATTTGAGTATGAAGATGAGTATGATGACTCTTTTGATGATCTAGGACTGAGTGTTGCGGATTCAGGAGCAGGGGAAATTGAGTCGTTCGGTGAAAAAAGCAGTTCAAATATTGGGAAACCTTGGGAGACGCGAACTGAAAGTTCATCTCAGAATGCTACTAGTTCAAAATGGGGTTCCAGACGGAATCCCCAATATTATGTCAAAGATGGCAAGAATTATAGTTACAAAGTAGCAGGTTCAGTTGCAGTTGCAAATGTGGGTGAGGCATCGTTAATTACTGAAGCACAAAAAGAATTGATTCATGGTCTTGGTCGTGGCGGGAATCTTCCACTTGGTGCAGTTAAGAAGCTGACAGAGTACTCTGAGCAGCAAGATAGTCATGTAGATATTTCTCAGACTGAAGGGAGAGGGAGAGGGTATAATCAGAATTCCAGGGGCTGGGGCAGAGGAGGAGGAGGAGAAAGGAGAATTGAGGAGCAAGATAAGCACTTTGATAATTCTCAGACAGAAGGCAGAGGGAGAGGGTACATTCGGAATTCCAGAGGCCAGGGAAGAGGAGGAGAAAGAAGTCAAGGCGACTCAAGTGAGGATCAAGATAAGCACTTTGATAATTCTCGGACAGAAGGGAGAGGGAGAGGGAGAGGGTACATTCGGAATTCCAGAGGCCGGGGAAGAGGAGGAGGAGAAAGAAGTCAAGGTGACTCAGGTGAGGAGCAAGATAACAAGCAAACTAGTGTTTCTGAAGTAGAAGGAAGAGAAAATGCAGGGAATCAGAGGGGAAGAGGGAGGAGAGGTGGGGGAGGAGGGAGGAGTAATAATTACAGGAAGGACCGAGCCATGAATAAACACTTTTCTAGTTTGGGTGGTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006307 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0035510 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0099053 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CUE

Protein Analysis

963

Amino Acids

105.87

Weight (kDa)

6.55

Isoelectric Point (pI)

40.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CUE	PF02845	535 - 575	5.9e-12	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27752 AT1G27752
fragaria_vesca	FvH4_2g33210 FvH4_2g33210 FvH4_2g33210 FvH4_2g33210
malus_domestica	MD03G1160700.v1.1 MD08G1085900.v1.1 MD15G1071100.v1.1
prunus_persica	Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1 Prupe.1G423800_v2.0.a1
pyrus_communis	pycom08g07060 pycom15g06690
rosa_chinensis	RchiOBHm_Chr6g0309461
rosa_laevigata	RLG00000013072
rosa_multiflora	Rmu_sc0014034.1_g000003
rosa_rugosa	Rorug06G0372200
rosa_samantha	Rh6AG485300 Rh6BG494600 Rh6CG499600 Rh6DG485700
rosa_wichuraiana	Rw6G042270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	492
Acc36I	ACCTGC	3 cut(s)	492, 1746, 2243
AccB1I	GGYRCC	1 cut(s)	335
AccB7I	CCANNNNNTGG	1 cut(s)	2457
AccBSI	CCGCTC	1 cut(s)	1319
AccI	GTMKAC	1 cut(s)	275
AccII	CGCG	3 cut(s)	525, 582, 2149
AclWI	GGATC	8 cut(s)	614, 627, 906, 919, 1298, 1311, 1635, 2616
AcsI	RAATTY	7 cut(s)	431, 470, 1356, 1444, 2446, 2554, 2674
AcuI	CTGAAG	4 cut(s)	1878, 2319, 2439, 2781
AcyI	GRCGYC	2 cut(s)	336, 357
AdeI	CACNNNGTG	1 cut(s)	2354
AfaI	GTAC	6 cut(s)	235, 840, 1516, 2378, 2546, 2666
AfiI	CCNNNNNNNGG	7 cut(s)	156, 313, 524, 1387, 1643, 2457, 2685
AhdI	GACNNNNNGTC	1 cut(s)	1741
AhlI	ACTAGT	4 cut(s)	236, 1822, 2177, 2750
AjnI	CCWGG	4 cut(s)	622, 898, 2450, 2565
AjuI	GAANNNNNNNTTGG	2 cut(s)	272, 304
AluBI	AGCT	9 cut(s)	191, 400, 418, 483, 668, 1292, 1661, 1943, 2368
AluI	AGCT	9 cut(s)	191, 400, 418, 483, 668, 1292, 1661, 1943, 2368
Alw21I	GWGCWC	2 cut(s)	631, 1372
Alw26I	GTCTC	5 cut(s)	372, 433, 650, 1757, 2138
AlwI	GGATC	8 cut(s)	614, 627, 906, 919, 1298, 1311, 1635, 2616
AlwNI	CAGNNNCTG	2 cut(s)	1862, 2457
Ama87I	CYCGRG	2 cut(s)	630, 1691
AoxI	GGCC	4 cut(s)	328, 876, 2563, 2683
ApoI	RAATTY	7 cut(s)	431, 470, 1356, 1444, 2446, 2554, 2674
AseI	ATTAAT	1 cut(s)	1350
Asp700I	GAANNNNTTC	5 cut(s)	607, 1395, 1418, 1701, 2316
AspLEI	GCGC	2 cut(s)	214, 338
AspS9I	GGNCC	3 cut(s)	877, 1888, 2848
AsuC2I	CCSGG	1 cut(s)	2687
AsuHPI	GGTGA	5 cut(s)	55, 2120, 2291, 2729, 2738
AvaI	CYCGRG	2 cut(s)	630, 1691
AvaII	GGWCC	2 cut(s)	1888, 2848
AxyI	CCTNAGG	2 cut(s)	21, 426
BaeGI	GKGCMC	1 cut(s)	1028
BamHI	GGATCC	3 cut(s)	619, 911, 1303
BanI	GGYRCC	1 cut(s)	335
BbsI	GAAGAC	3 cut(s)	73, 914, 1740
Bbv12I	GWGCWC	2 cut(s)	631, 1372
BccI	CCATC	6 cut(s)	244, 1012, 1105, 1200, 1455, 2219
BceAI	ACGGC	4 cut(s)	160, 344, 882, 903
BcgI	CGANNNNNNTGC	2 cut(s)	701, 735
BciT130I	CCWGG	4 cut(s)	624, 900, 2452, 2567
BciVI	GTATCC	2 cut(s)	982, 1849
BcnI	CCSGG	1 cut(s)	2687
BcoDI	GTCTC	5 cut(s)	372, 433, 650, 1757, 2138
BcuI	ACTAGT	4 cut(s)	236, 1822, 2177, 2750
BfmI	CTRYAG	3 cut(s)	488, 1275, 1833
BfoI	RGCGCY	1 cut(s)	339
BfuAI	ACCTGC	3 cut(s)	492, 1746, 2243
BfuI	GTATCC	2 cut(s)	982, 1849
BmcAI	AGTACT	2 cut(s)	235, 2378
Bme1390I	CCNGG	5 cut(s)	624, 900, 2452, 2567, 2687
Bme18I	GGWCC	2 cut(s)	1888, 2848
BmeRI	GACNNNNNGTC	1 cut(s)	1741
BmeT110I	CYCGRG	2 cut(s)	630, 1691
BmgT120I	GGNCC	3 cut(s)	877, 1888, 2848
BmrFI	CCNGG	5 cut(s)	624, 900, 2452, 2567, 2687
BmsI	GCATC	4 cut(s)	827, 952, 970, 2294
BpiI	GAAGAC	3 cut(s)	73, 914, 1740
BpmI	CTGGAG	2 cut(s)	921, 959
BpuEI	CTTGAG	3 cut(s)	398, 1356, 2584
BpuMI	CCSGG	1 cut(s)	2687
BsaHI	GRCGYC	2 cut(s)	336, 357
BsaWI	WCCGGW	1 cut(s)	12
BsaXI	ACNNNNNCTCC	4 cut(s)	671, 701, 2797, 2827
Bsc4I	CCNNNNNNNGG	7 cut(s)	156, 313, 524, 1387, 1643, 2457, 2685
Bse118I	RCCGGY	1 cut(s)	217
Bse1I	ACTGG	1 cut(s)	942
Bse21I	CCTNAGG	2 cut(s)	21, 426
Bse3DI	GCAATG	1 cut(s)	775
BseBI	CCWGG	4 cut(s)	624, 900, 2452, 2567
BseGI	GGATG	7 cut(s)	255, 985, 1004, 1211, 1466, 1480, 1588
BseLI	CCNNNNNNNGG	7 cut(s)	156, 313, 524, 1387, 1643, 2457, 2685
BseMI	GCAATG	1 cut(s)	775
BseNI	ACTGG	1 cut(s)	942
BseSI	GKGCMC	1 cut(s)	1028
BseYI	CCCAGC	3 cut(s)	171, 1288, 2457
BsgI	GTGCAG	1 cut(s)	2376
Bsh1236I	CGCG	3 cut(s)	525, 582, 2149
BshFI	GGCC	4 cut(s)	330, 878, 2565, 2685
BshNI	GGYRCC	1 cut(s)	335
BsiHKAI	GWGCWC	2 cut(s)	631, 1372
BsiHKCI	CYCGRG	2 cut(s)	630, 1691
BsiSI	CCGG	5 cut(s)	13, 45, 157, 218, 2686
BslFI	GGGAC	4 cut(s)	71, 96, 154, 1874
BslI	CCNNNNNNNGG	7 cut(s)	156, 313, 524, 1387, 1643, 2457, 2685
BsmAI	GTCTC	5 cut(s)	372, 433, 650, 1757, 2138
BsmBI	CGTCTC	1 cut(s)	2138
BsmFI	GGGAC	4 cut(s)	71, 96, 154, 1874
BsmI	GAATGC	1 cut(s)	2176
BsnI	GGCC	4 cut(s)	330, 878, 2565, 2685
BsoBI	CYCGRG	2 cut(s)	630, 1691
Bsp1286I	GDGCHC	3 cut(s)	631, 1028, 1372
Bsp1407I	TGTACA	1 cut(s)	838
Bsp143I	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
Bsp19I	CCATGG	1 cut(s)	975
BspANI	GGCC	4 cut(s)	330, 878, 2565, 2685
BspFNI	CGCG	3 cut(s)	525, 582, 2149
BspHI	TCATGA	2 cut(s)	733, 1729
BspMAI	CTGCAG	1 cut(s)	1279
BspMI	ACCTGC	3 cut(s)	492, 1746, 2243
BspPI	GGATC	8 cut(s)	614, 627, 906, 919, 1298, 1311, 1635, 2616
BspT107I	GGYRCC	1 cut(s)	335
BsrBI	CCGCTC	1 cut(s)	1319
BsrDI	GCAATG	1 cut(s)	775
BsrFI	RCCGGY	1 cut(s)	217
BsrGI	TGTACA	1 cut(s)	838
BsrI	ACTGG	1 cut(s)	942
BssAI	RCCGGY	1 cut(s)	217
BssMI	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
BssNI	GRCGYC	2 cut(s)	336, 357
BssT1I	CCWWGG	4 cut(s)	279, 531, 975, 2138
Bst2UI	CCWGG	4 cut(s)	624, 900, 2452, 2567
Bst4CI	ACNGT	6 cut(s)	492, 1215, 1338, 1792, 1837, 1858
Bst6I	CTCTTC	6 cut(s)	1637, 1731, 2566, 2686, 2767, 2794
BstACI	GRCGYC	2 cut(s)	336, 357
BstAPI	GCANNNNNTGC	1 cut(s)	2000
BstAUI	TGTACA	1 cut(s)	838
BstC8I	GCNNGC	3 cut(s)	42, 219, 328
BstDSI	CCRYGG	2 cut(s)	360, 975
BstF5I	GGATG	7 cut(s)	255, 985, 1004, 1211, 1466, 1480, 1588
BstFNI	CGCG	3 cut(s)	525, 582, 2149
BstH2I	RGCGCY	1 cut(s)	339
BstHHI	GCGC	2 cut(s)	214, 338
BstKTI	GATC	7 cut(s)	385, 622, 914, 1306, 1630, 2059, 2611
BstMAI	GTCTC	5 cut(s)	372, 433, 650, 1757, 2138
BstMBI	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
BstNI	CCWGG	4 cut(s)	624, 900, 2452, 2567
BstSCI	CCNGG	5 cut(s)	622, 898, 2450, 2565, 2685
BstSFI	CTRYAG	3 cut(s)	488, 1275, 1833
BstSLI	GKGCMC	1 cut(s)	1028
BstUI	CGCG	3 cut(s)	525, 582, 2149
BstV2I	GAAGAC	3 cut(s)	73, 914, 1740
BstX2I	RGATCY	4 cut(s)	619, 911, 1303, 1627
BstXI	CCANNNNNNTGG	1 cut(s)	538
BstYI	RGATCY	4 cut(s)	619, 911, 1303, 1627
Bsu36I	CCTNAGG	2 cut(s)	21, 426
BsuI	GTATCC	2 cut(s)	982, 1849
BsuRI	GGCC	4 cut(s)	330, 878, 2565, 2685
BtgI	CCRYGG	2 cut(s)	360, 975
BtgZI	GCGATG	1 cut(s)	506
BtsCI	GGATG	7 cut(s)	255, 985, 1004, 1211, 1466, 1480, 1588
BtsI	GCAGTG	1 cut(s)	780
BtsIMutI	CAGTG	2 cut(s)	780, 1863
BveI	ACCTGC	3 cut(s)	492, 1746, 2243
Cac8I	GCNNGC	3 cut(s)	42, 219, 328
CaiI	CAGNNNCTG	2 cut(s)	1862, 2457
CciI	TCATGA	2 cut(s)	733, 1729
CfoI	GCGC	2 cut(s)	214, 338
Cfr10I	RCCGGY	1 cut(s)	217
Cfr13I	GGNCC	3 cut(s)	877, 1888, 2848
CseI	GACGC	3 cut(s)	187, 365, 2155
Csp6I	GTAC	6 cut(s)	234, 839, 1515, 2377, 2545, 2665
CviQI	GTAC	6 cut(s)	234, 839, 1515, 2377, 2545, 2665
DinI	GGCGCC	1 cut(s)	337
DpnI	GATC	7 cut(s)	384, 621, 913, 1305, 1629, 2058, 2610
DpnII	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
DraIII	CACNNNGTG	1 cut(s)	2354
DriI	GACNNNNNGTC	1 cut(s)	1741
Eam1104I	CTCTTC	6 cut(s)	1637, 1731, 2566, 2686, 2767, 2794
Eam1105I	GACNNNNNGTC	1 cut(s)	1741
EarI	CTCTTC	6 cut(s)	1637, 1731, 2566, 2686, 2767, 2794
EciI	GGCGGA	1 cut(s)	136
Eco130I	CCWWGG	4 cut(s)	279, 531, 975, 2138
Eco47I	GGWCC	2 cut(s)	1888, 2848
Eco57I	CTGAAG	4 cut(s)	1878, 2319, 2439, 2781
Eco81I	CCTNAGG	2 cut(s)	21, 426
Eco88I	CYCGRG	2 cut(s)	630, 1691
EcoO109I	RGGNCCY	2 cut(s)	877, 1888
EcoRI	GAATTC	3 cut(s)	2446, 2554, 2674
EcoRII	CCWGG	4 cut(s)	622, 898, 2450, 2565
EcoT14I	CCWWGG	4 cut(s)	279, 531, 975, 2138
EgeI	GGCGCC	1 cut(s)	337
EheI	GGCGCC	1 cut(s)	337
ErhI	CCWWGG	4 cut(s)	279, 531, 975, 2138
Esp3I	CGTCTC	1 cut(s)	2138
FalI	AAGNNNNNCTT	4 cut(s)	1616, 1648, 1710, 1742
FaqI	GGGAC	4 cut(s)	71, 96, 154, 1874
FauI	CCCGC	1 cut(s)	2330
FauNDI	CATATG	1 cut(s)	716
FblI	GTMKAC	1 cut(s)	275
FokI	GGATG	7 cut(s)	262, 991, 992, 1218, 1473, 1487, 1595
GlaI	GCGC	2 cut(s)	213, 337
GsaI	CCCAGC	3 cut(s)	175, 1292, 2461
GsuI	CTGGAG	2 cut(s)	921, 959
HaeII	RGCGCY	1 cut(s)	339
HaeIII	GGCC	4 cut(s)	330, 878, 2565, 2685
HapII	CCGG	5 cut(s)	13, 45, 157, 218, 2686
HgaI	GACGC	3 cut(s)	187, 365, 2155
HhaI	GCGC	2 cut(s)	214, 338
Hin1I	GRCGYC	2 cut(s)	336, 357
Hin6I	GCGC	2 cut(s)	212, 336
HinP1I	GCGC	2 cut(s)	212, 336
HincII	GTYRAC	1 cut(s)	276
HindII	GTYRAC	1 cut(s)	276
HindIII	AAGCTT	1 cut(s)	189
HpaII	CCGG	5 cut(s)	13, 45, 157, 218, 2686
HphI	GGTGA	5 cut(s)	55, 2120, 2291, 2729, 2738
Hpy166II	GTNNAC	2 cut(s)	276, 1515
Hpy8I	GTNNAC	2 cut(s)	276, 1515
Hpy99I	CGWCG	3 cut(s)	203, 344, 383
HpyCH4III	ACNGT	6 cut(s)	492, 1215, 1338, 1792, 1837, 1858
HpyCH4IV	ACGT	1 cut(s)	856
HpySE526I	ACGT	1 cut(s)	856
Hsp92I	GRCGYC	2 cut(s)	336, 357
HspAI	GCGC	2 cut(s)	212, 336
KasI	GGCGCC	1 cut(s)	335
KflI	GGGWCCC	1 cut(s)	1888
KroI	GCCGGC	1 cut(s)	217
KroNI	GCCGGC	1 cut(s)	219
Kzo9I	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
LmnI	GCTCC	4 cut(s)	527, 2084, 2494, 2731
LweI	GCATC	4 cut(s)	827, 952, 970, 2294
MaeII	ACGT	1 cut(s)	856
MaeIII	GTNAC	5 cut(s)	8, 775, 797, 2240, 2717
MalI	GATC	7 cut(s)	384, 621, 913, 1305, 1629, 2058, 2610
MbiI	CCGCTC	1 cut(s)	1319
MboI	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
MfeI	CAATTG	1 cut(s)	966
MflI	RGATCY	4 cut(s)	619, 911, 1303, 1627
MhlI	GDGCHC	3 cut(s)	631, 1028, 1372
Mly113I	GGCGCC	1 cut(s)	336
MlyI	GAGTC	9 cut(s)	16, 374, 384, 1214, 1613, 2039, 2108, 2591, 2714
MmeI	TCCRAC	1 cut(s)	1197
MreI	CGCCGGCG	1 cut(s)	217
MroNI	GCCGGC	1 cut(s)	217
MroXI	GAANNNNTTC	5 cut(s)	607, 1395, 1418, 1701, 2316
MseI	TTAA	5 cut(s)	1350, 1562, 1599, 2291, 2361
MslI	CAYNNNNRTG	2 cut(s)	738, 1545
MspA1I	CMGCKG	1 cut(s)	326
MspI	CCGG	5 cut(s)	13, 45, 157, 218, 2686
MspR9I	CCNGG	5 cut(s)	624, 900, 2452, 2567, 2687
MunI	CAATTG	1 cut(s)	966
Mva1269I	GAATGC	1 cut(s)	2176
MvaI	CCWGG	4 cut(s)	624, 900, 2452, 2567
MvnI	CGCG	3 cut(s)	525, 582, 2149
NaeI	GCCGGC	1 cut(s)	219
NarI	GGCGCC	1 cut(s)	336
NciI	CCSGG	1 cut(s)	2687
NcoI	CCATGG	1 cut(s)	975
NdeI	CATATG	1 cut(s)	716
NdeII	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
NgoMIV	GCCGGC	1 cut(s)	217
NmeAIII	GCCGAG	1 cut(s)	312
NmuCI	GTSAC	4 cut(s)	8, 775, 797, 2717
PagI	TCATGA	2 cut(s)	733, 1729
PaqCI	CACCTGC	1 cut(s)	492
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PctI	GAATGC	1 cut(s)	2176
PdiI	GCCGGC	1 cut(s)	219
PdmI	GAANNNNTTC	5 cut(s)	607, 1395, 1418, 1701, 2316
PflMI	CCANNNNNTGG	1 cut(s)	2457
PfoI	TCCNGGA	1 cut(s)	898
PleI	GAGTC	9 cut(s)	15, 373, 383, 1214, 1612, 2039, 2107, 2591, 2714
PluTI	GGCGCC	1 cut(s)	339
PpsI	GAGTC	9 cut(s)	15, 373, 383, 1214, 1612, 2039, 2107, 2591, 2714
PpuMI	RGGWCCY	1 cut(s)	1888
PshBI	ATTAAT	1 cut(s)	1350
Psp5II	RGGWCCY	1 cut(s)	1888
Psp6I	CCWGG	4 cut(s)	622, 898, 2450, 2565
PspFI	CCCAGC	3 cut(s)	171, 1288, 2457
PspGI	CCWGG	4 cut(s)	622, 898, 2450, 2565
PspPI	GGNCC	3 cut(s)	877, 1888, 2848
PspPPI	RGGWCCY	1 cut(s)	1888
PstI	CTGCAG	1 cut(s)	1279
PstNI	CAGNNNCTG	2 cut(s)	1862, 2457
PsuI	RGATCY	4 cut(s)	619, 911, 1303, 1627
RsaI	GTAC	6 cut(s)	235, 840, 1516, 2378, 2546, 2666
RsaNI	GTAC	6 cut(s)	234, 839, 1515, 2377, 2545, 2665
RseI	CAYNNNNRTG	2 cut(s)	738, 1545
SalI	GTCGAC	1 cut(s)	274
SaqAI	TTAA	5 cut(s)	1350, 1562, 1599, 2291, 2361
Sau3AI	GATC	7 cut(s)	382, 619, 911, 1303, 1627, 2056, 2608
Sau96I	GGNCC	3 cut(s)	877, 1888, 2848
ScaI	AGTACT	2 cut(s)	235, 2378
SchI	GAGTC	9 cut(s)	16, 374, 384, 1214, 1613, 2039, 2108, 2591, 2714
ScrFI	CCNGG	5 cut(s)	624, 900, 2452, 2567, 2687
SduI	GDGCHC	3 cut(s)	631, 1028, 1372
SfaNI	GCATC	4 cut(s)	827, 952, 970, 2294
SfcI	CTRYAG	3 cut(s)	488, 1275, 1833
SfoI	GGCGCC	1 cut(s)	337
SgrAI	CRCCGGYG	1 cut(s)	217
SinI	GGWCC	2 cut(s)	1888, 2848
SmiMI	CAYNNNNRTG	2 cut(s)	738, 1545
SmlI	CTYRAG	3 cut(s)	413, 1371, 2599
SmoI	CTYRAG	3 cut(s)	413, 1371, 2599
SpeI	ACTAGT	4 cut(s)	236, 1822, 2177, 2750
SspDI	GGCGCC	1 cut(s)	335
SspI	AATATT	4 cut(s)	1014, 1426, 2128, 2213
StyD4I	CCNGG	5 cut(s)	622, 898, 2450, 2565, 2685
StyI	CCWWGG	4 cut(s)	279, 531, 975, 2138
TaaI	ACNGT	6 cut(s)	492, 1215, 1338, 1792, 1837, 1858
TaiI	ACGT	1 cut(s)	859
TaqI	TCGA	6 cut(s)	5, 275, 381, 406, 601, 711
TaqII	GACCGA	1 cut(s)	2865
TatI	WGTACW	4 cut(s)	233, 838, 1514, 2376
TauI	GCSGC	4 cut(s)	217, 326, 579, 582
Tru1I	TTAA	5 cut(s)	1350, 1562, 1599, 2291, 2361
Tru9I	TTAA	5 cut(s)	1350, 1562, 1599, 2291, 2361
TscAI	CASTG	2 cut(s)	780, 1863
TseFI	GTSAC	4 cut(s)	8, 775, 797, 2717
Tsp45I	GTSAC	4 cut(s)	8, 775, 797, 2717
TspGWI	ACGGA	4 cut(s)	785, 924, 1473, 2215
TspRI	CASTG	2 cut(s)	780, 1863
Van91I	CCANNNNNTGG	1 cut(s)	2457
VpaK11BI	GGWCC	2 cut(s)	1888, 2848
VspI	ATTAAT	1 cut(s)	1350
XapI	RAATTY	7 cut(s)	431, 470, 1356, 1444, 2446, 2554, 2674
XcmI	CCANNNNNNNNNTGG	1 cut(s)	538
XmiI	GTMKAC	1 cut(s)	275
XmnI	GAANNNNTTC	5 cut(s)	607, 1395, 1418, 1701, 2316
ZrmI	AGTACT	2 cut(s)	235, 2378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.