pycom15g07700

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0006308
Physical Location & Seq
Forward (+)
4754152 .. 4756853
2702 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1179 bp
ATGGACGGCGGCGATGGGACAATGAGGCTCGGTGCTCTTAACTTGAAACCGGATCGGGTCGGCGGCTTCGAGTCGGGTCCCGACGTGTCGGTTTCGTCGCCGGTCACGAGGCAGAAGGCTGTGGCGGCAAAGCAGTTCATTGAGAATCACTACAAGAACTACCTTCAAGGTCTGCAGGATCGCAAAGAGAGACGTCGAGCGCTTCAAAGGAAAGTACAAGAAGATCAGATACCGAGTGAGGAACAAGAGGAGATGATGAGGAATTTGGAACGCCGAGAAACAGAATATATGAGGATGCAAAGACGTAAAATTGGCATTGATGATTTTGAGCAATTAACTGTGATTGGCAAAGGTGCATTTGGTGAGGTAAGGTTATGTCGTGCTAAAGGTACAGGAGAGATTTATGCCATGAAGAAACTGAAGAAATCAGAGATGCTTAGTCGCGGACAGGTTGAGCATGTGCGTTCTGAGAGGAACTTGCTTGCGGAGGTTGATAGTCGGTGCATTGTAAAACTTCATTATTCGTTTCAAGATTCTGATTTCTTGTACCTTATCATGGAGTACTTACCTGGTGGTGATATTATGACATTACTAATGAGAGAAGATGCTCTTTCTGAAGATGTTGCTCGTTTCTACATGGCAGAGAGTATTCTGGCTATTCACTCAATCCATCAACACAACTACATTCATAGGGACATAAAACCAGATAACCTGATACTGGATAAAAATGGCCATTTGAAGCTTTCAGATTTTGGCTTGTGTAAACCTCTGGATGACAAGTATTCAACATTGTTGCTGGAAAATGATGATTTGACCTCCCAGGAATCCATATCTGAAACTGAAGGACAGTCTGGTTGTGATAAGGTTCCTTGGTTGATGCCAAAAGAACAGTTACAACAATGGAAACGAAATCGCCGTGCCTTGGCTTTTTCAACCGTTGGAACTCTTGACTATATGGCACCTGAGGTGTTGCTCAAGAAAGGCTATGGAATAGAGTGTGATTGGTGGTCCTTAGGGGCAATTATGTATGAGATGCTTGTAGGCTATCCTCCCTTCTACTCTGATGACCCAAGGATCACATGCCGCAAGATAATCAATTGGAGGACATACCTGAAATTCCCTGACGAACCCAAAATCTCGGAAGAAGCAAAGCGATCTGATCTGTCACTTGTTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000902 GO:0000904 GO:0002009 GO:0002165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0007423 GO:0007444 GO:0007455 GO:0007469 GO:0007472 GO:0007476 GO:0007552 GO:0007560 GO:0008037 GO:0008038 GO:0008144 GO:0008150 GO:0008152 GO:0008544 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009913 GO:0009987 GO:0010769 GO:0010975 GO:0016043 GO:0016301 GO:0016310 GO:0016358 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022008 GO:0022416 GO:0022603 GO:0022604 GO:0023052 GO:0030030 GO:0030154 GO:0030182 GO:0030424 GO:0030425 GO:0030554 GO:0030855 GO:0031175 GO:0031344 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032990 GO:0035107 GO:0035114 GO:0035120 GO:0035214 GO:0035220 GO:0035239 GO:0035295 GO:0035315 GO:0035316 GO:0035317 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0036477 GO:0042995 GO:0043005 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044297 GO:0044424 GO:0044444 GO:0044463 GO:0044464 GO:0045595 GO:0045664 GO:0048468 GO:0048513 GO:0048563 GO:0048569 GO:0048666 GO:0048667 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048800 GO:0048812 GO:0048813 GO:0048814 GO:0048856 GO:0048858 GO:0048869 GO:0050767 GO:0050773 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051128 GO:0051239 GO:0051716 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0065007 GO:0070451 GO:0070593 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0097447 GO:0097458 GO:0099568 GO:0120025 GO:0120035 GO:0120036 GO:0120038 GO:0120039 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_C

Protein Analysis

393

Amino Acids

45.38

Weight (kDa)

6.14

Isoelectric Point (pI)

55.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 109 - 262 3.4e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 112 - 262 6e-22 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 183 - 265 2.4e-07 ABC1 atypical kinase-like domain
Pkinase PF00069 309 - 384 1.3e-15 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 196
AccB1I GGYRCC 1 cut(s) 958
AccII CGCG 1 cut(s) 444
AciI CCGC 6 cut(s) 9, 63, 125, 444, 485, 1084
AclWI GGATC 3 cut(s) 60, 186, 1082
AcoI YGGCCR 1 cut(s) 730
AcsI RAATTY 2 cut(s) 262, 1115
AcuI CTGAAG 3 cut(s) 440, 636, 861
AcyI GRCGYC 1 cut(s) 193
AfaI GTAC 4 cut(s) 216, 391, 548, 563
AfeI AGCGCT 1 cut(s) 201
AfiI CCNNNNNNNGG 3 cut(s) 556, 718, 922
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 7 cut(s) 46, 167, 206, 530, 739, 786, 933
AjiI CACGTC 1 cut(s) 85
AjnI CCWGG 2 cut(s) 568, 819
AluBI AGCT 1 cut(s) 742
AluI AGCT 1 cut(s) 742
Alw21I GWGCWC 1 cut(s) 37
Alw26I GTCTC 1 cut(s) 184
AlwI GGATC 3 cut(s) 60, 186, 1082
Aor51HI AGCGCT 1 cut(s) 201
AoxI GGCC 1 cut(s) 730
ApoI RAATTY 2 cut(s) 262, 1115
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 2 cut(s) 77, 1008
AsuHPI GGTGA 2 cut(s) 374, 587
AvaII GGWCC 2 cut(s) 77, 1008
AxyI CCTNAGG 2 cut(s) 963, 1012
BalI TGGCCA 1 cut(s) 732
BanI GGYRCC 1 cut(s) 958
BarI GAAGNNNNNNTAC 2 cut(s) 213, 245
BauI CACGAG 1 cut(s) 106
Bbv12I GWGCWC 1 cut(s) 37
BccI CCATC 2 cut(s) 8, 678
BceAI ACGGC 2 cut(s) 22, 900
BciT130I CCWGG 2 cut(s) 570, 821
BcoDI GTCTC 1 cut(s) 184
BfmI CTRYAG 1 cut(s) 173
BfoI RGCGCY 1 cut(s) 203
BisI GCNGC 4 cut(s) 10, 64, 126, 1084
BlsI GCNGC 4 cut(s) 11, 65, 127, 1085
BmcAI AGTACT 1 cut(s) 563
Bme1390I CCNGG 2 cut(s) 570, 821
Bme18I GGWCC 2 cut(s) 77, 1008
BmgBI CACGTC 1 cut(s) 85
BmgT120I GGNCC 2 cut(s) 77, 1008
BmiI GGNNCC 4 cut(s) 78, 79, 867, 960
BmrFI CCNGG 2 cut(s) 570, 821
BmsI GCATC 5 cut(s) 285, 423, 595, 867, 1023
BpuEI CTTGAG 1 cut(s) 959
BsaHI GRCGYC 1 cut(s) 193
BsaJI CCNNGG 4 cut(s) 819, 869, 921, 1070
BsaWI WCCGGW 1 cut(s) 49
Bsc4I CCNNNNNNNGG 3 cut(s) 556, 718, 922
Bse118I RCCGGY 1 cut(s) 100
Bse1I ACTGG 1 cut(s) 723
Bse21I CCTNAGG 2 cut(s) 963, 1012
BseBI CCWGG 2 cut(s) 570, 821
BseDI CCNNGG 4 cut(s) 819, 869, 921, 1070
BseGI GGATG 2 cut(s) 300, 778
BseLI CCNNNNNNNGG 3 cut(s) 556, 718, 922
BseMII CTCAG 2 cut(s) 459, 954
BseNI ACTGG 1 cut(s) 723
BseRI GAGGAG 1 cut(s) 263
Bsh1236I CGCG 1 cut(s) 444
BshFI GGCC 1 cut(s) 732
BshNI GGYRCC 1 cut(s) 958
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 2 cut(s) 50, 101
BslFI GGGAC 3 cut(s) 31, 63, 707
BslI CCNNNNNNNGG 3 cut(s) 556, 718, 922
BsmAI GTCTC 1 cut(s) 184
BsmBI CGTCTC 1 cut(s) 184
BsmFI GGGAC 3 cut(s) 31, 63, 707
BsnI GGCC 1 cut(s) 732
Bsp1286I GDGCHC 1 cut(s) 37
Bsp143I GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
BspACI CCGC 6 cut(s) 9, 63, 125, 444, 485, 1084
BspANI GGCC 1 cut(s) 732
BspCNI CTCAG 2 cut(s) 460, 955
BspFNI CGCG 1 cut(s) 444
BspLI GGNNCC 4 cut(s) 78, 79, 867, 960
BspMAI CTGCAG 1 cut(s) 177
BspPI GGATC 3 cut(s) 60, 186, 1082
BspT107I GGYRCC 1 cut(s) 958
BsrFI RCCGGY 1 cut(s) 100
BsrI ACTGG 1 cut(s) 723
BssAI RCCGGY 1 cut(s) 100
BssECI CCNNGG 4 cut(s) 819, 869, 921, 1070
BssMI GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
BssNI GRCGYC 1 cut(s) 193
BssSI CACGAG 1 cut(s) 106
BssT1I CCWWGG 3 cut(s) 869, 921, 1070
Bst2BI CACGAG 1 cut(s) 106
Bst2UI CCWGG 2 cut(s) 570, 821
Bst4CI ACNGT 4 cut(s) 340, 849, 891, 937
BstACI GRCGYC 1 cut(s) 193
BstC8I GCNNGC 1 cut(s) 483
BstDEI CTNAG 4 cut(s) 437, 468, 963, 1012
BstF5I GGATG 2 cut(s) 300, 778
BstFNI CGCG 1 cut(s) 444
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 1 cut(s) 202
BstKTI GATC 6 cut(s) 55, 181, 226, 1077, 1157, 1162
BstMAI GTCTC 1 cut(s) 184
BstMBI GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
BstMWI GCNNNNNNNGC 1 cut(s) 125
BstNI CCWGG 2 cut(s) 570, 821
BstNSI RCATGY 2 cut(s) 461, 1083
BstSCI CCNGG 2 cut(s) 568, 819
BstSFI CTRYAG 1 cut(s) 173
BstUI CGCG 1 cut(s) 444
Bsu36I CCTNAGG 2 cut(s) 963, 1012
BsuRI GGCC 1 cut(s) 732
BtgZI GCGATG 1 cut(s) 27
BtrI CACGTC 1 cut(s) 85
BtsCI GGATG 2 cut(s) 300, 778
Cac8I GCNNGC 1 cut(s) 483
CfoI GCGC 1 cut(s) 202
Cfr10I RCCGGY 1 cut(s) 100
Cfr13I GGNCC 2 cut(s) 77, 1008
CsiI ACCWGGT 1 cut(s) 568
Csp6I GTAC 4 cut(s) 215, 390, 547, 562
CviAII CATG 5 cut(s) 409, 458, 556, 637, 1080
CviQI GTAC 4 cut(s) 215, 390, 547, 562
DdeI CTNAG 4 cut(s) 437, 468, 963, 1012
DpnI GATC 6 cut(s) 54, 180, 225, 1076, 1156, 1161
DpnII GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
EaeI YGGCCR 1 cut(s) 730
Eco130I CCWWGG 3 cut(s) 869, 921, 1070
Eco47I GGWCC 2 cut(s) 77, 1008
Eco47III AGCGCT 1 cut(s) 201
Eco57I CTGAAG 3 cut(s) 440, 636, 861
Eco81I CCTNAGG 2 cut(s) 963, 1012
EcoO109I RGGNCCY 1 cut(s) 77
EcoRII CCWGG 2 cut(s) 568, 819
EcoT14I CCWWGG 3 cut(s) 869, 921, 1070
ErhI CCWWGG 3 cut(s) 869, 921, 1070
Esp3I CGTCTC 1 cut(s) 184
FaeI CATG 5 cut(s) 412, 461, 559, 640, 1083
FalI AAGNNNNNCTT 2 cut(s) 594, 626
FaqI GGGAC 3 cut(s) 31, 63, 707
FatI CATG 5 cut(s) 408, 457, 555, 636, 1079
Fnu4HI GCNGC 4 cut(s) 10, 64, 126, 1084
FokI GGATG 2 cut(s) 307, 785
Fsp4HI GCNGC 4 cut(s) 10, 64, 126, 1084
GlaI GCGC 1 cut(s) 201
GluI GCNGC 4 cut(s) 10, 64, 126, 1084
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 1 cut(s) 732
HapII CCGG 2 cut(s) 50, 101
HhaI GCGC 1 cut(s) 202
Hin1I GRCGYC 1 cut(s) 193
Hin1II CATG 5 cut(s) 412, 461, 559, 640, 1083
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HindIII AAGCTT 1 cut(s) 740
HinfI GANTC 4 cut(s) 71, 145, 533, 824
HpaII CCGG 2 cut(s) 50, 101
HphI GGTGA 2 cut(s) 374, 587
Hpy166II GTNNAC 1 cut(s) 764
Hpy188III TCNNGA 6 cut(s) 80, 106, 530, 770, 947, 976
Hpy8I GTNNAC 1 cut(s) 764
Hpy99I CGWCG 3 cut(s) 86, 100, 198
HpyAV CCTTC 4 cut(s) 109, 173, 836, 1063
HpyCH4III ACNGT 4 cut(s) 340, 849, 891, 937
HpyCH4IV ACGT 3 cut(s) 84, 193, 304
HpyCH4V TGCA 4 cut(s) 175, 298, 356, 504
HpyF10VI GCNNNNNNNGC 1 cut(s) 125
HpyF3I CTNAG 4 cut(s) 437, 468, 963, 1012
HpySE526I ACGT 3 cut(s) 84, 193, 304
Hsp92I GRCGYC 1 cut(s) 193
Hsp92II CATG 5 cut(s) 412, 461, 559, 640, 1083
HspAI GCGC 1 cut(s) 200
KflI GGGWCCC 1 cut(s) 77
Kzo9I GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
LweI GCATC 5 cut(s) 285, 423, 595, 867, 1023
MabI ACCWGGT 1 cut(s) 568
MaeII ACGT 3 cut(s) 84, 193, 304
MaeIII GTNAC 3 cut(s) 103, 891, 1164
MalI GATC 6 cut(s) 54, 180, 225, 1076, 1156, 1161
MboI GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
MboII GAAGA 6 cut(s) 233, 424, 433, 614, 629, 1154
MfeI CAATTG 1 cut(s) 1096
MhlI GDGCHC 1 cut(s) 37
MlsI TGGCCA 1 cut(s) 732
MluCI AATT 6 cut(s) 262, 309, 332, 1020, 1096, 1115
MluNI TGGCCA 1 cut(s) 732
MlyI GAGTC 1 cut(s) 80
MmeI TCCRAC 1 cut(s) 919
Mox20I TGGCCA 1 cut(s) 732
MscI TGGCCA 1 cut(s) 732
MseI TTAA 2 cut(s) 39, 335
Msp20I TGGCCA 1 cut(s) 732
MspI CCGG 2 cut(s) 50, 101
MspR9I CCNGG 2 cut(s) 570, 821
MunI CAATTG 1 cut(s) 1096
MvaI CCWGG 2 cut(s) 570, 821
MvnI CGCG 1 cut(s) 444
MwoI GCNNNNNNNGC 1 cut(s) 125
NdeII GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
NlaIII CATG 5 cut(s) 412, 461, 559, 640, 1083
NlaIV GGNNCC 4 cut(s) 78, 79, 867, 960
NmeAIII GCCGAG 1 cut(s) 299
NmuCI GTSAC 2 cut(s) 103, 1164
NspI RCATGY 2 cut(s) 461, 1083
PcsI WCGNNNNNNNCGW 3 cut(s) 66, 104, 913
PfeI GAWTC 3 cut(s) 145, 533, 824
PkrI GCNGC 4 cut(s) 11, 65, 127, 1085
PleI GAGTC 1 cut(s) 79
PpsI GAGTC 1 cut(s) 79
PpuMI RGGWCCY 1 cut(s) 77
Psp5II RGGWCCY 1 cut(s) 77
Psp6I CCWGG 2 cut(s) 568, 819
PspGI CCWGG 2 cut(s) 568, 819
PspN4I GGNNCC 4 cut(s) 78, 79, 867, 960
PspPI GGNCC 2 cut(s) 77, 1008
PspPPI RGGWCCY 1 cut(s) 77
PstI CTGCAG 1 cut(s) 177
RsaI GTAC 4 cut(s) 216, 391, 548, 563
RsaNI GTAC 4 cut(s) 215, 390, 547, 562
SaqAI TTAA 2 cut(s) 39, 335
SatI GCNGC 4 cut(s) 10, 64, 126, 1084
Sau3AI GATC 6 cut(s) 52, 178, 223, 1074, 1154, 1159
Sau96I GGNCC 2 cut(s) 77, 1008
ScaI AGTACT 1 cut(s) 563
SchI GAGTC 1 cut(s) 80
ScrFI CCNGG 2 cut(s) 570, 821
SduI GDGCHC 1 cut(s) 37
SexAI ACCWGGT 1 cut(s) 568
SfaNI GCATC 5 cut(s) 285, 423, 595, 867, 1023
SfcI CTRYAG 1 cut(s) 173
SinI GGWCC 2 cut(s) 77, 1008
SmlI CTYRAG 1 cut(s) 974
SmoI CTYRAG 1 cut(s) 974
Sse9I AATT 6 cut(s) 262, 309, 332, 1020, 1096, 1115
SsiI CCGC 6 cut(s) 9, 63, 125, 444, 485, 1084
StyD4I CCNGG 2 cut(s) 568, 819
StyI CCWWGG 3 cut(s) 869, 921, 1070
TaaI ACNGT 4 cut(s) 340, 849, 891, 937
TaiI ACGT 3 cut(s) 87, 196, 307
TaqI TCGA 2 cut(s) 69, 196
TasI AATT 6 cut(s) 262, 309, 332, 1020, 1096, 1115
TatI WGTACW 2 cut(s) 214, 561
TauI GCSGC 4 cut(s) 12, 66, 128, 1086
TfiI GAWTC 3 cut(s) 145, 533, 824
Tru1I TTAA 2 cut(s) 39, 335
Tru9I TTAA 2 cut(s) 39, 335
TseFI GTSAC 2 cut(s) 103, 1164
Tsp45I GTSAC 2 cut(s) 103, 1164
TspDTI ATGAA 4 cut(s) 127, 425, 506, 677
VpaK11BI GGWCC 2 cut(s) 77, 1008
XapI RAATTY 2 cut(s) 262, 1115
XceI RCATGY 2 cut(s) 461, 1083
ZraI GACGTC 1 cut(s) 194
ZrmI AGTACT 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.