pycom15g10040

Cryptochrome DASH

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0016105
Physical Location & Seq
Forward (+)
6558187 .. 6562066
3880 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1971 bp
ATGAAACTGGATGTTGCCGTAGAATTTAGTTTGCCGCCATTAATAACGGACCTAACGGTAGGTTTGAAAGCAAATGAGGTCAGCGTCTCTCTCCTTCCCTTGGCCTCCAAACCTCCACGTTTCAAATCCAACTCTCTGCACACGTGTCAGCAACCCCACTGCTCAAAACTCTCTCCCCCTGAGCTCAAAACTCGGCAATGGCAGATGGCATATCTTCACTCCTCGCTCGCACCCCCCTGTCTGAAAAAGCTCATCATTCTCCCGTTATTCCCAAATCCAAAACCCACGATTTCAACCCAAAGACTCAATCTTTTCCGACCCATGAGTTCCTCCTCCAGCTCCAAACCTGAATCCCCCGCCTCGGTCTCCCAGGTTCCGGGTCTGGACCCGGTGGAAATGGAGCGAGTTGCGGACCAAACGCTGCAGAGGTACTCGGCCTCCTCCTCTGCCAAGAGAAACGGCAGAGGTGTGGCCGTCGTTTGGTTCAGGAACGACCTCAGAGTGCTGGACAATAAGGCCCTTTACAAAGCTTGGGTTTCGTCCCAGGAGGTTCTGGCCGTCTATTGTGTTGATCCTAGGATTTTTGGTTCTACCCGTTACTTTGGTTTTCCTAAAACTGGAGCGTTGAGAGCACAGTTTCTGATCGAGTGCTTGGCCGATTTGAAGAAGAATTTAATGAAGCGGGGTCTTAACTTGCTCATTCAACATGGGAAGCCCGAGGAGATTCTCCCTGATCTTGCAAAAGCTTTTGGAGCTCACACGGTATATGCCCAAAAAGAAACTTGCAGTGAGGAGCTAAATGTCGAAAGATTGGTCAGCAAAGGTTTGCAACGAGTGGTGTTGCCATCATCTTCGGTGCAATCCTCTAAGCCCGGTTCTGTAAACAATCCTAGGTTACAACTTATTTGGGGCACCACTATGTACCATATAGAGGACCTCCCTTTTGATACCAGCAGCCTACCGGACGTGTATACTCAATTTCGCAAGTCTGTTGAAGCCAAATGCACAGTTCGTGGCTGCATCAAAATTCCAGCTTCTCTTGGTCCACCCCCTAGTGTTGAAGACTGGGGATGTGTTCCTTCATTAGATCAGTTTGGACTTCAATCTTCAATTGTAAGTAAAGGAATGAAGTTTGTCGGGGGCGAAAGTGCTGCATTGGGCAGAGTGCACGAGTATTTCTGGAAGAAGGATTTGGTAAAGATGTATAAACACACCAGAAACGGAATGTTAGGACCTGATTATTCAACAAAATTTTCTCCATGGCTTGCTTCAGGAAGCCTTTCTCCCCGTTTCATATATGAAGAGGTAAAGAGGTATGAAAAAGAAAGGGAAGCAAATGATTCCACATACTGGGTATTGTTTGAACTGATATGGAGGGATTACTTCAGGTTTCTATCAGCAAAATGCGGGAATTCCCTTTTCCATTTAGGTGGCCCGAGAAAGGTGGAGCATAGATGGAGCCAGGAAAAGACTTTATTTGAATCCTGGAGAGATGGTCATACGGGGTATCCACTTATAGACGCTAATATGAAAGAGCTGTCGACCACTGGATTCATGTCAAATCGAGGAAGGCAGATTGTATGTTCCTTTCTAGTTCGTGATATGGGCATTGACTGGCGCATGGGAGCTGAATGGTTCGAGACATGTCTTTTGGATTATGACCCTTGTTCCAATTATGGGAATTGGACCTATGGAGCAGGTGTTGGAAATGACCCCAGAGAAGATCGTTACTTCAGTATTCCGAAACAAGCGCAGAATTATGATCCTGATGGCGAGTATGTGGCATATTGGCTTCCTCAATTACGATCGCTTCCGAAAGATAAACGGAACTTTCCCGGAATGGCATATATCAAGCCGGTTGTACCTCTCAAGTTTGGAAATGCCAGTAGTAGGCACCAAAACCAGGACAGGGGCTCGGCTGCTAGACGCGCAAATTTTGGAGGAAGACAGCCACGGGGGCAAAGGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

657

Amino Acids

74.18

Weight (kDa)

9.44

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 158 - 336 6.4e-36 DNA photolyase
FAD_binding_7 PF03441 453 - 609 5.9e-50 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016105)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24850
fragaria_vesca FvH4_2g30661
malus_domestica MD15G1110200.v1.1
prunus_persica Prupe.1G462400_v2.0.a1
pyrus_communis pycom15g10040
rosa_chinensis RchiOBHm_Chr6g0312231
rosa_laevigata RLG00000010340
rosa_multiflora Rmu_sc0010924.1_g000003
rosa_roxburghii Rroxscaffold_7G00156930
rosa_rugosa Rorug06G0394300
rosa_samantha Rh6AG511200 Rh6BG522200 Rh6CG528000 Rh6DG513400
rosa_wichuraiana Rw6G044460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1688
Acc36I ACCTGC 1 cut(s) 1688
AccB1I GGYRCC 2 cut(s) 911, 1893
AccB7I CCANNNNNTGG 1 cut(s) 1350
AccI GTMKAC 2 cut(s) 971, 1541
AccII CGCG 1 cut(s) 1929
AciI CCGC 5 cut(s) 35, 357, 410, 682, 1407
AclWI GGATC 2 cut(s) 566, 1757
AcoI YGGCCR 3 cut(s) 471, 555, 654
AcsI RAATTY 6 cut(s) 23, 670, 1026, 1250, 1411, 1933
AcuI CTGAAG 3 cut(s) 1254, 1369, 1717
AcvI CACGTG 1 cut(s) 144
AfaI GTAC 3 cut(s) 431, 923, 1863
AflIII ACRYGT 4 cut(s) 141, 143, 966, 1643
AjiI CACGTC 1 cut(s) 967
AjnI CCWGG 5 cut(s) 369, 543, 1461, 1484, 1902
AjuI GAANNNNNNNTTGG 2 cut(s) 1175, 1207
AloI GAACNNNNNNTCC 2 cut(s) 571, 603
Alw21I GWGCWC 4 cut(s) 186, 634, 757, 1170
Alw26I GTCTC 3 cut(s) 91, 370, 1634
Alw44I GTGCAC 1 cut(s) 1166
AlwI GGATC 2 cut(s) 566, 1757
AlwNI CAGNNNCTG 1 cut(s) 640
Ama87I CYCGRG 2 cut(s) 716, 1435
AoxI GGCC 7 cut(s) 102, 435, 471, 516, 555, 654, 1432
ApaLI GTGCAC 1 cut(s) 1166
ApeKI GCWGC 5 cut(s) 421, 954, 1017, 1151, 1919
ApoI RAATTY 6 cut(s) 23, 670, 1026, 1250, 1411, 1933
ArsI GACNNNNNNTTYG 6 cut(s) 798, 830, 926, 958, 1633, 1665
AseI ATTAAT 1 cut(s) 41
Asp700I GAANNNNTTC 1 cut(s) 1279
AspA2I CCTAGG 2 cut(s) 575, 890
AspLEI GCGC 3 cut(s) 1620, 1753, 1931
AspS9I GGNCC 9 cut(s) 49, 385, 412, 517, 934, 1043, 1232, 1433, 1686
AsuC2I CCSGG 4 cut(s) 378, 389, 873, 1836
AvaI CYCGRG 2 cut(s) 716, 1435
AvaII GGWCC 7 cut(s) 49, 385, 412, 934, 1043, 1232, 1686
AvrII CCTAGG 2 cut(s) 575, 890
BaeGI GKGCMC 2 cut(s) 914, 1170
BanI GGYRCC 2 cut(s) 911, 1893
BanII GRGCYC 3 cut(s) 186, 757, 1916
BauI CACGAG 1 cut(s) 1169
BbrPI CACGTG 1 cut(s) 144
BbsI GAAGAC 2 cut(s) 1068, 1951
Bbv12I GWGCWC 4 cut(s) 186, 634, 757, 1170
BbvI GCAGC 5 cut(s) 408, 966, 1004, 1138, 1906
BccI CCATC 5 cut(s) 199, 853, 1449, 1487, 1763
BceAI ACGGC 4 cut(s) 2, 458, 475, 542
BcgI CGANNNNNNTGC 2 cut(s) 1133, 1167
BciT130I CCWGG 5 cut(s) 371, 545, 1463, 1486, 1904
BciVI GTATCC 1 cut(s) 1518
BcnI CCSGG 4 cut(s) 378, 389, 873, 1836
BcoDI GTCTC 3 cut(s) 91, 370, 1634
BfaI CTAG 5 cut(s) 576, 891, 1053, 1592, 1923
BfmI CTRYAG 1 cut(s) 422
BfuAI ACCTGC 1 cut(s) 1688
BfuI GTATCC 1 cut(s) 1518
BglI GCCNNNNNGGC 1 cut(s) 1957
BisI GCNGC 6 cut(s) 35, 422, 955, 1018, 1152, 1920
BlnI CCTAGG 2 cut(s) 575, 890
BlsI GCNGC 6 cut(s) 36, 423, 956, 1019, 1153, 1921
Bme1390I CCNGG 9 cut(s) 371, 378, 389, 545, 873, 1463, 1486, 1836, 1904
Bme18I GGWCC 7 cut(s) 49, 385, 412, 934, 1043, 1232, 1686
BmeT110I CYCGRG 2 cut(s) 716, 1435
BmgBI CACGTC 1 cut(s) 967
BmgT120I GGNCC 9 cut(s) 49, 385, 412, 517, 934, 1043, 1232, 1433, 1686
BmiI GGNNCC 5 cut(s) 375, 387, 913, 1460, 1895
BmrFI CCNGG 9 cut(s) 371, 378, 389, 545, 873, 1463, 1486, 1836, 1904
BmrI ACTGGG 2 cut(s) 1075, 1360
BmsI GCATC 1 cut(s) 1029
BmuI ACTGGG 2 cut(s) 1075, 1360
BpiI GAAGAC 2 cut(s) 1068, 1951
BpmI CTGGAG 3 cut(s) 319, 639, 1507
Bpu10I CCTNAGC 1 cut(s) 180
BpuEI CTTGAG 1 cut(s) 1853
BpuMI CCSGG 4 cut(s) 378, 389, 873, 1836
BsaAI YACGTR 1 cut(s) 144
BsaI GGTCTC 1 cut(s) 370
BsaJI CCNNGG 9 cut(s) 99, 360, 369, 543, 575, 717, 890, 1259, 1952
BsaWI WCCGGW 1 cut(s) 961
BsaXI ACNNNNNCTCC 6 cut(s) 422, 452, 1480, 1510, 1686, 1716
Bse118I RCCGGY 1 cut(s) 1855
Bse1I ACTGG 7 cut(s) 12, 622, 1070, 1355, 1552, 1619, 1884
Bse3DI GCAATG 1 cut(s) 203
BseBI CCWGG 5 cut(s) 371, 545, 1463, 1486, 1904
BseDI CCNNGG 9 cut(s) 99, 360, 369, 543, 575, 717, 890, 1259, 1952
BseGI GGATG 2 cut(s) 16, 1076
BseMI GCAATG 1 cut(s) 203
BseMII CTCAG 2 cut(s) 171, 511
BseNI ACTGG 7 cut(s) 12, 622, 1070, 1355, 1552, 1619, 1884
BseRI GAGGAG 6 cut(s) 211, 322, 430, 433, 734, 806
BseSI GKGCMC 2 cut(s) 914, 1170
BseXI GCAGC 5 cut(s) 408, 966, 1004, 1138, 1906
BsgI GTGCAG 1 cut(s) 122
Bsh1236I CGCG 1 cut(s) 1929
Bsh1285I CGRYCG 1 cut(s) 1808
BshFI GGCC 7 cut(s) 104, 437, 473, 518, 557, 656, 1434
BshNI GGYRCC 2 cut(s) 911, 1893
BsiEI CGRYCG 1 cut(s) 1808
BsiHKAI GWGCWC 4 cut(s) 186, 634, 757, 1170
BsiHKCI CYCGRG 2 cut(s) 716, 1435
BsiSI CCGG 6 cut(s) 377, 389, 873, 962, 1836, 1856
BslFI GGGAC 1 cut(s) 526
BsmAI GTCTC 3 cut(s) 91, 370, 1634
BsmBI CGTCTC 1 cut(s) 91
BsmFI GGGAC 1 cut(s) 526
BsnI GGCC 7 cut(s) 104, 437, 473, 518, 557, 656, 1434
Bso31I GGTCTC 1 cut(s) 370
BsoBI CYCGRG 2 cut(s) 716, 1435
Bsp1286I GDGCHC 6 cut(s) 186, 634, 757, 914, 1170, 1916
Bsp143I GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
Bsp19I CCATGG 1 cut(s) 1259
BspACI CCGC 5 cut(s) 35, 357, 410, 682, 1407
BspANI GGCC 7 cut(s) 104, 437, 473, 518, 557, 656, 1434
BspCNI CTCAG 2 cut(s) 172, 510
BspFNI CGCG 1 cut(s) 1929
BspLI GGNNCC 5 cut(s) 375, 387, 913, 1460, 1895
BspMAI CTGCAG 1 cut(s) 426
BspMI ACCTGC 1 cut(s) 1688
BspPI GGATC 2 cut(s) 566, 1757
BspT107I GGYRCC 2 cut(s) 911, 1893
BspTNI GGTCTC 1 cut(s) 370
BsrDI GCAATG 1 cut(s) 203
BsrFI RCCGGY 1 cut(s) 1855
BsrI ACTGG 7 cut(s) 12, 622, 1070, 1355, 1552, 1619, 1884
BssAI RCCGGY 1 cut(s) 1855
BssECI CCNNGG 9 cut(s) 99, 360, 369, 543, 575, 717, 890, 1259, 1952
BssMI GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
BssNAI GTATAC 1 cut(s) 972
BssSI CACGAG 1 cut(s) 1169
BssT1I CCWWGG 4 cut(s) 99, 575, 890, 1259
Bst1107I GTATAC 1 cut(s) 972
Bst2BI CACGAG 1 cut(s) 1169
Bst2UI CCWGG 5 cut(s) 371, 545, 1463, 1486, 1904
Bst4CI ACNGT 4 cut(s) 58, 636, 763, 1009
Bst6I CTCTTC 1 cut(s) 1296
BstBAI YACGTR 1 cut(s) 144
BstC8I GCNNGC 2 cut(s) 228, 1266
BstDEI CTNAG 3 cut(s) 180, 497, 867
BstDSI CCRYGG 2 cut(s) 1259, 1952
BstF5I GGATG 2 cut(s) 16, 1076
BstFNI CGCG 1 cut(s) 1929
BstHHI GCGC 3 cut(s) 1620, 1753, 1931
BstKTI GATC 7 cut(s) 574, 645, 736, 1090, 1726, 1765, 1808
BstMAI GTCTC 3 cut(s) 91, 370, 1634
BstMBI GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
BstMCI CGRYCG 1 cut(s) 1808
BstMWI GCNNNNNNNGC 4 cut(s) 629, 752, 1928, 1957
BstNI CCWGG 5 cut(s) 371, 545, 1463, 1486, 1904
BstNSI RCATGY 1 cut(s) 1647
BstSCI CCNGG 9 cut(s) 369, 376, 387, 543, 871, 1461, 1484, 1834, 1902
BstSFI CTRYAG 1 cut(s) 422
BstSLI GKGCMC 2 cut(s) 914, 1170
BstUI CGCG 1 cut(s) 1929
BstV1I GCAGC 5 cut(s) 408, 966, 1004, 1138, 1906
BstV2I GAAGAC 2 cut(s) 1068, 1951
BstXI CCANNNNNNTGG 1 cut(s) 1430
BstZ17I GTATAC 1 cut(s) 972
BsuI GTATCC 1 cut(s) 1518
BsuRI GGCC 7 cut(s) 104, 437, 473, 518, 557, 656, 1434
BtgI CCRYGG 2 cut(s) 1259, 1952
BtrI CACGTC 1 cut(s) 967
BtsCI GGATG 2 cut(s) 16, 1076
BtsI GCAGTG 2 cut(s) 157, 793
BtsIMutI CAGTG 3 cut(s) 157, 793, 1545
BveI ACCTGC 1 cut(s) 1688
Cac8I GCNNGC 2 cut(s) 228, 1266
CaiI CAGNNNCTG 1 cut(s) 640
CfoI GCGC 3 cut(s) 1620, 1753, 1931
Cfr10I RCCGGY 1 cut(s) 1855
Cfr13I GGNCC 9 cut(s) 49, 385, 412, 517, 934, 1043, 1232, 1433, 1686
CseI GACGC 3 cut(s) 73, 1529, 1935
Csp6I GTAC 3 cut(s) 430, 922, 1862
CviAII CATG 6 cut(s) 322, 707, 1260, 1555, 1621, 1644
CviQI GTAC 3 cut(s) 430, 922, 1862
DdeI CTNAG 3 cut(s) 180, 497, 867
DpnI GATC 7 cut(s) 573, 644, 735, 1089, 1725, 1764, 1807
DpnII GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
EaeI YGGCCR 3 cut(s) 471, 555, 654
Eam1104I CTCTTC 1 cut(s) 1296
EarI CTCTTC 1 cut(s) 1296
Ecl136II GAGCTC 2 cut(s) 184, 755
Eco130I CCWWGG 4 cut(s) 99, 575, 890, 1259
Eco24I GRGCYC 3 cut(s) 186, 757, 1916
Eco31I GGTCTC 1 cut(s) 370
Eco47I GGWCC 7 cut(s) 49, 385, 412, 934, 1043, 1232, 1686
Eco53kI GAGCTC 2 cut(s) 184, 755
Eco57I CTGAAG 3 cut(s) 1254, 1369, 1717
Eco72I CACGTG 1 cut(s) 144
Eco88I CYCGRG 2 cut(s) 716, 1435
EcoICRI GAGCTC 2 cut(s) 184, 755
EcoO109I RGGNCCY 3 cut(s) 517, 934, 1232
EcoRI GAATTC 1 cut(s) 1411
EcoRII CCWGG 5 cut(s) 369, 543, 1461, 1484, 1902
EcoT14I CCWWGG 4 cut(s) 99, 575, 890, 1259
EcoT38I GRGCYC 3 cut(s) 186, 757, 1916
ErhI CCWWGG 4 cut(s) 99, 575, 890, 1259
Esp3I CGTCTC 1 cut(s) 91
FaeI CATG 6 cut(s) 325, 710, 1263, 1558, 1624, 1647
FaqI GGGAC 1 cut(s) 526
FatI CATG 6 cut(s) 321, 706, 1259, 1554, 1620, 1643
FauI CCCGC 3 cut(s) 364, 675, 1400
FblI GTMKAC 2 cut(s) 971, 1541
Fnu4HI GCNGC 6 cut(s) 35, 422, 955, 1018, 1152, 1920
FokI GGATG 2 cut(s) 23, 1083
FriOI GRGCYC 3 cut(s) 186, 757, 1916
Fsp4HI GCNGC 6 cut(s) 35, 422, 955, 1018, 1152, 1920
FspBI CTAG 5 cut(s) 576, 891, 1053, 1592, 1923
GlaI GCGC 3 cut(s) 1619, 1752, 1930
GluI GCNGC 6 cut(s) 35, 422, 955, 1018, 1152, 1920
GsuI CTGGAG 3 cut(s) 319, 639, 1507
HaeIII GGCC 7 cut(s) 104, 437, 473, 518, 557, 656, 1434
HapII CCGG 6 cut(s) 377, 389, 873, 962, 1836, 1856
HgaI GACGC 3 cut(s) 73, 1529, 1935
HhaI GCGC 3 cut(s) 1620, 1753, 1931
Hin1II CATG 6 cut(s) 325, 710, 1263, 1558, 1624, 1647
Hin6I GCGC 3 cut(s) 1618, 1751, 1929
HinP1I GCGC 3 cut(s) 1618, 1751, 1929
HincII GTYRAC 1 cut(s) 1542
HindII GTYRAC 1 cut(s) 1542
HindIII AAGCTT 2 cut(s) 528, 744
HinfI GANTC 6 cut(s) 303, 350, 724, 1340, 1481, 1551
HpaII CCGG 6 cut(s) 377, 389, 873, 962, 1836, 1856
Hpy166II GTNNAC 5 cut(s) 883, 972, 1046, 1168, 1542
Hpy188I TCNGA 6 cut(s) 243, 317, 500, 642, 1743, 1815
Hpy188III TCNNGA 7 cut(s) 383, 487, 1180, 1272, 1598, 1639, 1766
Hpy8I GTNNAC 5 cut(s) 883, 972, 1046, 1168, 1542
Hpy99I CGWCG 1 cut(s) 479
HpyAV CCTTC 4 cut(s) 104, 1089, 1180, 1563
HpyCH4III ACNGT 4 cut(s) 58, 636, 763, 1009
HpyCH4IV ACGT 3 cut(s) 118, 143, 966
HpyF10VI GCNNNNNNNGC 4 cut(s) 629, 752, 1928, 1957
HpyF3I CTNAG 3 cut(s) 180, 497, 867
HpySE526I ACGT 3 cut(s) 118, 143, 966
Hsp92II CATG 6 cut(s) 325, 710, 1263, 1558, 1624, 1647
HspAI GCGC 3 cut(s) 1618, 1751, 1929
Kzo9I GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
LmnI GCTCC 9 cut(s) 344, 400, 620, 752, 793, 1447, 1458, 1625, 1694
Lsp1109I GCAGC 5 cut(s) 408, 966, 1004, 1138, 1906
LweI GCATC 1 cut(s) 1029
MaeI CTAG 5 cut(s) 576, 891, 1053, 1592, 1923
MaeII ACGT 3 cut(s) 118, 143, 966
MaeIII GTNAC 3 cut(s) 596, 894, 1727
MalI GATC 7 cut(s) 573, 644, 735, 1089, 1725, 1764, 1807
MboI GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
MfeI CAATTG 1 cut(s) 1110
MhlI GDGCHC 6 cut(s) 186, 634, 757, 914, 1170, 1916
MlyI GAGTC 1 cut(s) 297
MmeI TCCRAC 3 cut(s) 153, 340, 1684
MroXI GAANNNNTTC 1 cut(s) 1279
MseI TTAA 3 cut(s) 41, 674, 690
MslI CAYNNNNRTG 2 cut(s) 917, 1428
MspI CCGG 6 cut(s) 377, 389, 873, 962, 1836, 1856
MspR9I CCNGG 9 cut(s) 371, 378, 389, 545, 873, 1463, 1486, 1836, 1904
MunI CAATTG 1 cut(s) 1110
MvaI CCWGG 5 cut(s) 371, 545, 1463, 1486, 1904
MvnI CGCG 1 cut(s) 1929
MwoI GCNNNNNNNGC 4 cut(s) 629, 752, 1928, 1957
NciI CCSGG 4 cut(s) 378, 389, 873, 1836
NcoI CCATGG 1 cut(s) 1259
NdeII GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
NlaIII CATG 6 cut(s) 325, 710, 1263, 1558, 1624, 1647
NlaIV GGNNCC 5 cut(s) 375, 387, 913, 1460, 1895
NmeAIII GCCGAG 3 cut(s) 172, 413, 1895
NspI RCATGY 1 cut(s) 1647
PaqCI CACCTGC 1 cut(s) 1688
PciI ACATGT 1 cut(s) 1643
PdmI GAANNNNTTC 1 cut(s) 1279
PfeI GAWTC 5 cut(s) 350, 724, 1340, 1481, 1551
PflMI CCANNNNNTGG 1 cut(s) 1350
PfoI TCCNGGA 2 cut(s) 1484, 1834
PkrI GCNGC 6 cut(s) 36, 423, 956, 1019, 1153, 1921
Ple19I CGATCG 1 cut(s) 1808
PleI GAGTC 1 cut(s) 297
PmaCI CACGTG 1 cut(s) 144
PmlI CACGTG 1 cut(s) 144
PpsI GAGTC 1 cut(s) 297
Ppu21I YACGTR 1 cut(s) 144
PpuMI RGGWCCY 2 cut(s) 934, 1232
PscI ACATGT 1 cut(s) 1643
PshBI ATTAAT 1 cut(s) 41
Psp124BI GAGCTC 2 cut(s) 186, 757
Psp5II RGGWCCY 2 cut(s) 934, 1232
Psp6I CCWGG 5 cut(s) 369, 543, 1461, 1484, 1902
PspCI CACGTG 1 cut(s) 144
PspGI CCWGG 5 cut(s) 369, 543, 1461, 1484, 1902
PspN4I GGNNCC 5 cut(s) 375, 387, 913, 1460, 1895
PspPI GGNCC 9 cut(s) 49, 385, 412, 517, 934, 1043, 1232, 1433, 1686
PspPPI RGGWCCY 2 cut(s) 934, 1232
PstI CTGCAG 1 cut(s) 426
PstNI CAGNNNCTG 1 cut(s) 640
PvuI CGATCG 1 cut(s) 1808
RsaI GTAC 3 cut(s) 431, 923, 1863
RsaNI GTAC 3 cut(s) 430, 922, 1862
RseI CAYNNNNRTG 2 cut(s) 917, 1428
SacI GAGCTC 2 cut(s) 186, 757
SalI GTCGAC 1 cut(s) 1540
SaqAI TTAA 3 cut(s) 41, 674, 690
SatI GCNGC 6 cut(s) 35, 422, 955, 1018, 1152, 1920
Sau3AI GATC 7 cut(s) 571, 642, 733, 1087, 1723, 1762, 1805
Sau96I GGNCC 9 cut(s) 49, 385, 412, 517, 934, 1043, 1232, 1433, 1686
SchI GAGTC 1 cut(s) 297
ScrFI CCNGG 9 cut(s) 371, 378, 389, 545, 873, 1463, 1486, 1836, 1904
SduI GDGCHC 6 cut(s) 186, 634, 757, 914, 1170, 1916
SfaNI GCATC 1 cut(s) 1029
SfcI CTRYAG 1 cut(s) 422
SinI GGWCC 7 cut(s) 49, 385, 412, 934, 1043, 1232, 1686
SmiMI CAYNNNNRTG 2 cut(s) 917, 1428
SmlI CTYRAG 1 cut(s) 1868
SmoI CTYRAG 1 cut(s) 1868
SsiI CCGC 5 cut(s) 35, 357, 410, 682, 1407
SspMI CTAG 5 cut(s) 576, 891, 1053, 1592, 1923
SstI GAGCTC 2 cut(s) 186, 757
StyD4I CCNGG 9 cut(s) 369, 376, 387, 543, 871, 1461, 1484, 1834, 1902
StyI CCWWGG 4 cut(s) 99, 575, 890, 1259
TaaI ACNGT 4 cut(s) 58, 636, 763, 1009
TaiI ACGT 3 cut(s) 121, 146, 969
TaqI TCGA 5 cut(s) 645, 804, 1541, 1564, 1638
TaqII GACCGA 1 cut(s) 352
TauI GCSGC 1 cut(s) 37
TfiI GAWTC 5 cut(s) 350, 724, 1340, 1481, 1551
Tru1I TTAA 3 cut(s) 41, 674, 690
Tru9I TTAA 3 cut(s) 41, 674, 690
TscAI CASTG 3 cut(s) 164, 793, 1552
TseI GCWGC 5 cut(s) 421, 954, 1017, 1151, 1919
TspDTI ATGAA 9 cut(s) 17, 692, 1071, 1142, 1282, 1314, 1332, 1543, 1544
TspGWI ACGGA 3 cut(s) 62, 1236, 1840
TspRI CASTG 3 cut(s) 164, 793, 1552
Van91I CCANNNNNTGG 1 cut(s) 1350
VneI GTGCAC 1 cut(s) 1166
VpaK11BI GGWCC 7 cut(s) 49, 385, 412, 934, 1043, 1232, 1686
VspI ATTAAT 1 cut(s) 41
XapI RAATTY 6 cut(s) 23, 670, 1026, 1250, 1411, 1933
XceI RCATGY 1 cut(s) 1647
XmaJI CCTAGG 2 cut(s) 575, 890
XmiI GTMKAC 2 cut(s) 971, 1541
XmnI GAANNNNTTC 1 cut(s) 1279
XspI CTAG 5 cut(s) 576, 891, 1053, 1592, 1923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.