Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007645

Physical Location & Seq

Genomic Coordinates Reverse (-)

8175892 .. 8179797

Gene Structure 3906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g12030.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGCCATCTATAACTAAAACTTGGGAGAAGTTTTTTATTGTGTTCGGATGTGTTAATTTACAATATAATTATTTAATTTTTTATATAATAACACGCAATGTACAATTTCGTGTGACGAGTGCTGCTGAAAAATCTCTCCAAAACCGTAGTCTCTTGCCGAAAAAGCCATTAAACAATAATAACACATGGTTAAAACAGCTCCATCAGACACCGGCAACGGAACAGCAGAGCTGCCAGAAGCTAACCCAGATACCAAAACTACCCCGTTTGGACTCCCCTACATTGCACTGCTTGAAAATGGTGCAAGACGGCTGTGGCGGAGGACATGCAGAGGCGGACAGCTGCGGAGGCCGCTCGGTTGTGGTGGGGGTGAAGCTGGACTCGAAGAGTAGAGAGCTGCTGACATGGGCTCTGGTTAAGGTTGCTCAGCCTGGTGATCGCGTGATTGCCCTCCATGTGCTCGGTAAAAATGAAATTGTTGATCGAGATGGGAAGTCGTCGCTTCTTTCTCTTGTCAAAGCGTTTGACTCTGTTCTTGCAGTCTATGATGGTTTCTGCAACTTGAAGCAGGTGGATCTCAAGCTTAAAATCTGCAGAGGAACATCAGTCAAGAAAATTTTAGTTCGGGAAGCGAATTCATATACTGCAAGTAAGGTTATAGTGGGAACTGCCCAGAACCACCATAAGATCCGGTCATCGACCACCGTGGCCAAGTACTGTGCCAAGAAACTGTCTAAGGATTGTGGGGTTCTTGCTGTAAATAATGGGAAGGTTTTGTTTAACCGAGAAGGCTCTCAAACAACTTACTGTGACCCCCAAGGAAGTGAAGAGCATCGCCGGAACAGTTTGCTCAGCGCATTTCACCGATCAGTGTATAAGTCTTCCAAAGTACTAAATGAAGGCAGTGACAGTGTGACCTTAAAGGACACATATGGTCAGGTTAATTGTCAAAACTTGGAGCAGGGATTAGCTAAAGTCTTTCTGGAATGTTCGGAGAGTGTTGAGAAACAGAAATGCTCAGTTTGTTCCCGGCCCTCGGTAGATAGTTCTTGTCACCAATCTGCAGAAGAGTCCTCGGATGACGGTGATAATAAATATATGGCTATAGTGCCAGTGCAGAAAGAAGAGGCACTAGCAGCGAGCTCAATTTCTACGTTGATCAAAGAATTACCGGAAGTGAGACCTGGTTGGCCACTGCTTCGACGGGCTGTATTACCAGACCGACAATCTCCAGAGAGGTCTTGGGTCCGGAAGATCTCAGTAGTTCAATGGGCAATGCAGTTGCCCAGTAGACAGCATTCAACTGCCAGCAATTTCGATGAAGGGAAAAATAGTTGTGATTCAGATCAAACTTCCTGTTTGAATGGAGAAAGTGGCGCAATTGTTGCGGTGGGTGGTGAGGCAATGACTGCCCCACCTTCACCGGACTACAATTCAAAAAGCCTGCCCAAAGTATTGGAGGGACTGCATGAAAAGTACTCTGCTACTTGCAGATTGTTCAACTACCAGGAACTTCAGTCAGCTACATCATACTTCTTGGCTGAAAACTTCATTGGGAGAGGCGGTAGCAGTCAAGTTTATAGAGGCTGCCTTCCAGACGGCAAGGAACTTGCTGTTAAAATCTTAAAACCATCTGAAGATGTGTTGAAGGAGTTTGTTTTGGAAATAGAGATCATTACTACCTTAAATCACAAGAACATTATTTCCCTTCTGGGGTTTTGTTTTGAGGATAACAATCTCCTCTTGGTTTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAATCTCCATGGAACTAAGAAGGATCCCCTTGCATTTGGTTGGAACGAGAGATATAAGGTGGCCGTGGGGGTAGCTGAGGCCTTGGATTATCTGCACACCGGCAGCGCACAACCTGTAATCCACAGGGATGTCAAATCATCCAATATTCTACTATCTGATGATTTTGAGCCGCAGCTCTCTGATTTTGGACTAGCAAAATGGGCATCAACCTCATCTTCACATATAACATGCACTGATGTTGCAGGCACCTTTGGCTATTTGGCTCCTGAATACTTCATGTATGGCAAAGTAAACGACAAAATTGACGTGTATGCATTTGGTGTTGTACTCCTCGAGCTTCTTTCAGGAAGAAAGCCTATAAGCAGTGACCATCCAAAAGGCCATGAGAGCCTAGTCATGTGGGCCAAGCCAATTCTAAACAGTGGGAAGGTGTCCCAACTATTAGATCCGCATTTGGGCGATAACTATGACCAGGGCCAGATAGAGAGAATGGTTTTAGCAGCCACTCTTTGTATCAGACATGCTTCACGAGCTAGGCCCCAGATGAGCTTTATCGTGAAGCTTCTTCAAGGCGATGCAGATGTGACTAAGTGGTCCAGGCTGCAAGTTCATGCCATGGAGGAATCTGAAGTGCTCGAAAACGAAACATGTCCACGTTCAAATCTGCAGTCTCACCTTAACCTTGCGCTGCTTGATGTGGAGGATGACTCACTCTCCATGAGCAGCATTGAGCAAACTGTCTCCTTAGAGGACTACCTGAAGGGGCGGTGGAGCCGCTCATCAAGCTTCGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Usp

Protein Analysis

859

Amino Acids

95.08

Weight (kDa)

7.06

Isoelectric Point (pI)

47.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77280 AT1G77280
fragaria_vesca	FvH4_2g27940 FvH4_2g27940 FvH4_2g27940 FvH4_2g27940
malus_domestica	MD08G1160300.v1.1 MD08G1160400.v1.1 MD15G1133500.v1.1
prunus_persica	Prupe.1G489100_v2.0.a1 Prupe.1G489100_v2.0.a1
pyrus_communis	pycom08g13520 pycom15g12030
rosa_chinensis	RchiOBHm_Chr6g0296761
rosa_laevigata	RLG00000011661
rosa_multiflora	Rmu_ssc0000192.1_g000010
rosa_roxburghii	Rroxscaffold_7G00171190
rosa_rugosa	Rorug06G0265700 Rorug06G0265800
rosa_samantha	Rh6AG376800 Rh6BG385100 Rh6CG390400 Rh6DG377500
rosa_wichuraiana	Rw6G032940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	559
AasI	GACNNNNNNGTC	1 cut(s)	2374
Acc36I	ACCTGC	1 cut(s)	559
AccB1I	GGYRCC	1 cut(s)	2027
AccBSI	CCGCTC	2 cut(s)	354, 2559
AccI	GTMKAC	1 cut(s)	1291
AccII	CGCG	1 cut(s)	441
AccIII	TCCGGA	1 cut(s)	1248
AclWI	GGATC	5 cut(s)	582, 682, 1799, 1812, 2222
AcoI	YGGCCR	3 cut(s)	708, 1190, 1842
AcsI	RAATTY	2 cut(s)	615, 634
AcuI	CTGAAG	4 cut(s)	1499, 1656, 2430, 2561
AfaI	GTAC	5 cut(s)	102, 716, 891, 1478, 2109
AfiI	CCNNNNNNNGG	3 cut(s)	1036, 1713, 2237
AflIII	ACRYGT	2 cut(s)	2088, 2429
AjiI	CACGTC	1 cut(s)	2089
AjnI	CCWGG	5 cut(s)	430, 1183, 1506, 2253, 2378
AjuI	GAANNNNNNNTTGG	2 cut(s)	1536, 1568
AloI	GAACNNNNNNTCC	2 cut(s)	1688, 1720
Alw21I	GWGCWC	3 cut(s)	462, 1145, 2418
Alw26I	GTCTC	4 cut(s)	155, 1174, 2457, 2527
AlwI	GGATC	5 cut(s)	582, 682, 1799, 1812, 2222
Ama87I	CYCGRG	1 cut(s)	2114
Aor13HI	TCCGGA	1 cut(s)	1248
ApoI	RAATTY	2 cut(s)	615, 634
ArsI	GACNNNNNNTTYG	4 cut(s)	133, 165, 2435, 2467
AspLEI	GCGC	4 cut(s)	857, 1379, 1889, 2470
AspS9I	GGNCC	6 cut(s)	1032, 1246, 2184, 2257, 2319, 2376
AsuC2I	CCSGG	1 cut(s)	1030
AsuHPI	GGTGA	8 cut(s)	382, 446, 854, 1046, 1097, 1409, 1413, 2447
AvaI	CYCGRG	1 cut(s)	2114
AvaII	GGWCC	2 cut(s)	1246, 2376
BalI	TGGCCA	2 cut(s)	710, 1192
BamHI	GGATCC	1 cut(s)	1804
BanI	GGYRCC	1 cut(s)	2027
BanII	GRGCYC	2 cut(s)	412, 1145
BauI	CACGAG	1 cut(s)	2310
BbsI	GAAGAC	1 cut(s)	873
Bbv12I	GWGCWC	3 cut(s)	462, 1145, 2418
BbvCI	CCTCAGC	1 cut(s)	1857
BccI	CCATC	6 cut(s)	13, 210, 482, 542, 1639, 2160
BceAI	ACGGC	3 cut(s)	325, 1615, 1829
BciT130I	CCWGG	5 cut(s)	432, 1185, 1508, 2255, 2380
BclI	TGATCA	1 cut(s)	1158
BcnI	CCSGG	1 cut(s)	1030
BcoDI	GTCTC	4 cut(s)	155, 1174, 2457, 2527
BfaI	CTAG	4 cut(s)	1133, 1973, 2174, 2316
BfmI	CTRYAG	4 cut(s)	592, 1062, 1104, 2447
BfuAI	ACCTGC	1 cut(s)	559
BglII	AGATCT	1 cut(s)	1254
BlpI	GCTNAGC	2 cut(s)	426, 851
BmcAI	AGTACT	3 cut(s)	716, 891, 1478
Bme1390I	CCNGG	6 cut(s)	432, 1030, 1185, 1508, 2255, 2380
Bme18I	GGWCC	2 cut(s)	1246, 2376
BmeT110I	CYCGRG	1 cut(s)	2114
BmgBI	CACGTC	1 cut(s)	2089
BmgT120I	GGNCC	6 cut(s)	1032, 1246, 2184, 2257, 2319, 2376
BmiI	GGNNCC	6 cut(s)	1247, 1806, 2029, 2046, 2321, 2555
BmrFI	CCNGG	6 cut(s)	432, 1030, 1185, 1508, 2255, 2380
BmrI	ACTGGG	1 cut(s)	1281
BmsI	GCATC	3 cut(s)	841, 1994, 2347
BmuI	ACTGGG	1 cut(s)	1281
BpiI	GAAGAC	1 cut(s)	873
BplI	GAGNNNNNCTC	2 cut(s)	2474, 2506
BpmI	CTGGAG	1 cut(s)	1215
Bpu10I	CCTNAGC	1 cut(s)	1857
Bpu1102I	GCTNAGC	2 cut(s)	426, 851
BpuEI	CTTGAG	1 cut(s)	563
BpuMI	CCSGG	1 cut(s)	1030
BsaBI	GATNNNNATC	2 cut(s)	1344, 1734
BsaI	GGTCTC	1 cut(s)	1174
BsaJI	CCNNGG	9 cut(s)	705, 817, 1035, 1074, 1789, 1845, 1863, 2254, 2397
BsaWI	WCCGGW	4 cut(s)	690, 1171, 1248, 1423
BsaXI	ACNNNNNCTCC	4 cut(s)	1549, 1579, 2480, 2510
Bsc4I	CCNNNNNNNGG	3 cut(s)	1036, 1713, 2237
Bse118I	RCCGGY	2 cut(s)	211, 1880
Bse1I	ACTGG	2 cut(s)	1112, 1287
Bse3DI	GCAATG	4 cut(s)	103, 281, 1281, 1410
Bse8I	GATNNNNATC	2 cut(s)	1344, 1734
BseAI	TCCGGA	1 cut(s)	1248
BseBI	CCWGG	5 cut(s)	432, 1185, 1508, 2255, 2380
BseDI	CCNNGG	9 cut(s)	705, 817, 1035, 1074, 1789, 1845, 1863, 2254, 2397
BseGI	GGATG	6 cut(s)	53, 1084, 1915, 1919, 2152, 2491
BseJI	GATNNNNATC	2 cut(s)	1344, 1734
BseLI	CCNNNNNNNGG	3 cut(s)	1036, 1713, 2237
BseMI	GCAATG	4 cut(s)	103, 281, 1281, 1410
BseMII	CTCAG	5 cut(s)	440, 865, 1032, 1272, 1848
BseNI	ACTGG	2 cut(s)	1112, 1287
BseRI	GAGGAG	2 cut(s)	1730, 2102
BsgI	GTGCAG	2 cut(s)	1136, 1859
Bsh1236I	CGCG	1 cut(s)	441
BshNI	GGYRCC	1 cut(s)	2027
BsiHKAI	GWGCWC	3 cut(s)	462, 1145, 2418
BsiHKCI	CYCGRG	1 cut(s)	2114
BsiSI	CCGG	8 cut(s)	212, 691, 838, 1030, 1172, 1249, 1424, 1881
BslFI	GGGAC	2 cut(s)	1476, 2200
BslI	CCNNNNNNNGG	3 cut(s)	1036, 1713, 2237
BsmAI	GTCTC	4 cut(s)	155, 1174, 2457, 2527
BsmFI	GGGAC	2 cut(s)	1476, 2200
BsmI	GAATGC	1 cut(s)	1297
Bso31I	GGTCTC	1 cut(s)	1174
BsoBI	CYCGRG	1 cut(s)	2114
Bsp1286I	GDGCHC	4 cut(s)	412, 462, 1145, 2418
Bsp13I	TCCGGA	1 cut(s)	1248
Bsp1407I	TGTACA	1 cut(s)	100
Bsp1720I	GCTNAGC	2 cut(s)	426, 851
Bsp19I	CCATGG	2 cut(s)	1789, 2397
BspCNI	CTCAG	5 cut(s)	439, 864, 1031, 1271, 1849
BspEI	TCCGGA	1 cut(s)	1248
BspFNI	CGCG	1 cut(s)	441
BspLI	GGNNCC	6 cut(s)	1247, 1806, 2029, 2046, 2321, 2555
BspMAI	CTGCAG	3 cut(s)	596, 1066, 2451
BspMI	ACCTGC	1 cut(s)	559
BspPI	GGATC	5 cut(s)	582, 682, 1799, 1812, 2222
BspQI	GCTCTTC	1 cut(s)	822
BspT107I	GGYRCC	1 cut(s)	2027
BspTNI	GGTCTC	1 cut(s)	1174
BsrBI	CCGCTC	2 cut(s)	354, 2559
BsrDI	GCAATG	4 cut(s)	103, 281, 1281, 1410
BsrFI	RCCGGY	2 cut(s)	211, 1880
BsrGI	TGTACA	1 cut(s)	100
BsrI	ACTGG	2 cut(s)	1112, 1287
BssAI	RCCGGY	2 cut(s)	211, 1880
BssECI	CCNNGG	9 cut(s)	705, 817, 1035, 1074, 1789, 1845, 1863, 2254, 2397
BssSI	CACGAG	1 cut(s)	2310
BssT1I	CCWWGG	4 cut(s)	817, 1789, 1863, 2397
Bst2BI	CACGAG	1 cut(s)	2310
Bst2UI	CCWGG	5 cut(s)	432, 1185, 1508, 2255, 2380
Bst6I	CTCTTC	5 cut(s)	380, 822, 1062, 1119, 1773
BstAPI	GCANNNNNTGC	2 cut(s)	1385, 1409
BstAUI	TGTACA	1 cut(s)	100
BstC8I	GCNNGC	4 cut(s)	1141, 1309, 1445, 2026
BstDEI	CTNAG	9 cut(s)	426, 735, 851, 1018, 1258, 1797, 1857, 2370, 2527
BstDSI	CCRYGG	4 cut(s)	705, 1789, 1845, 2397
BstF5I	GGATG	6 cut(s)	53, 1084, 1915, 1919, 2152, 2491
BstFNI	CGCG	1 cut(s)	441
BstHHI	GCGC	4 cut(s)	857, 1379, 1889, 2470
BstMAI	GTCTC	4 cut(s)	155, 1174, 2457, 2527
BstNI	CCWGG	5 cut(s)	432, 1185, 1508, 2255, 2380
BstNSI	RCATGY	4 cut(s)	329, 2013, 2306, 2433
BstSCI	CCNGG	6 cut(s)	430, 1028, 1183, 1506, 2253, 2378
BstSFI	CTRYAG	4 cut(s)	592, 1062, 1104, 2447
BstUI	CGCG	1 cut(s)	441
BstV2I	GAAGAC	1 cut(s)	873
BstX2I	RGATCY	5 cut(s)	574, 687, 1254, 1804, 2227
BstXI	CCANNNNNNTGG	1 cut(s)	1456
BstYI	RGATCY	5 cut(s)	574, 687, 1254, 1804, 2227
BtgI	CCRYGG	4 cut(s)	705, 1789, 1845, 2397
BtgZI	GCGATG	2 cut(s)	818, 2370
BtrI	CACGTC	1 cut(s)	2089
BtsCI	GGATG	6 cut(s)	53, 1084, 1915, 1919, 2152, 2491
BtsI	GCAGTG	4 cut(s)	286, 910, 1193, 2152
BtsIMutI	CAGTG	9 cut(s)	286, 876, 910, 916, 1119, 1193, 2013, 2152, 2209
BveI	ACCTGC	1 cut(s)	559
Cac8I	GCNNGC	4 cut(s)	1141, 1309, 1445, 2026
CfoI	GCGC	4 cut(s)	857, 1379, 1889, 2470
Cfr10I	RCCGGY	2 cut(s)	211, 1880
Cfr13I	GGNCC	6 cut(s)	1032, 1246, 2184, 2257, 2319, 2376
CsiI	ACCWGGT	1 cut(s)	1183
Csp6I	GTAC	5 cut(s)	101, 715, 890, 1477, 2108
CviQI	GTAC	5 cut(s)	101, 715, 890, 1477, 2108
DdeI	CTNAG	9 cut(s)	426, 735, 851, 1018, 1258, 1797, 1857, 2370, 2527
DrdI	GACNNNNNNGTC	1 cut(s)	2374
DseDI	GACNNNNNNGTC	1 cut(s)	2374
EaeI	YGGCCR	3 cut(s)	708, 1190, 1842
Eam1104I	CTCTTC	5 cut(s)	380, 822, 1062, 1119, 1773
EarI	CTCTTC	5 cut(s)	380, 822, 1062, 1119, 1773
EciI	GGCGGA	2 cut(s)	333, 350
Ecl136II	GAGCTC	1 cut(s)	1143
Eco130I	CCWWGG	4 cut(s)	817, 1789, 1863, 2397
Eco147I	AGGCCT	1 cut(s)	1862
Eco24I	GRGCYC	2 cut(s)	412, 1145
Eco31I	GGTCTC	1 cut(s)	1174
Eco47I	GGWCC	2 cut(s)	1246, 2376
Eco53kI	GAGCTC	1 cut(s)	1143
Eco57I	CTGAAG	4 cut(s)	1499, 1656, 2430, 2561
Eco88I	CYCGRG	1 cut(s)	2114
EcoICRI	GAGCTC	1 cut(s)	1143
EcoO109I	RGGNCCY	1 cut(s)	2319
EcoRI	GAATTC	1 cut(s)	634
EcoRII	CCWGG	5 cut(s)	430, 1183, 1506, 2253, 2378
EcoT14I	CCWWGG	4 cut(s)	817, 1789, 1863, 2397
EcoT22I	ATGCAT	1 cut(s)	2098
EcoT38I	GRGCYC	2 cut(s)	412, 1145
ErhI	CCWWGG	4 cut(s)	817, 1789, 1863, 2397
FaqI	GGGAC	2 cut(s)	1476, 2200
FauNDI	CATATG	1 cut(s)	931
FbaI	TGATCA	1 cut(s)	1158
FblI	GTMKAC	1 cut(s)	1291
FokI	GGATG	6 cut(s)	60, 1091, 1906, 1922, 2139, 2498
FriOI	GRGCYC	2 cut(s)	412, 1145
FspBI	CTAG	4 cut(s)	1133, 1973, 2174, 2316
GlaI	GCGC	4 cut(s)	856, 1378, 1888, 2469
GsuI	CTGGAG	1 cut(s)	1215
HapII	CCGG	8 cut(s)	212, 691, 838, 1030, 1172, 1249, 1424, 1881
HhaI	GCGC	4 cut(s)	857, 1379, 1889, 2470
Hin6I	GCGC	4 cut(s)	855, 1377, 1887, 2468
HinP1I	GCGC	4 cut(s)	855, 1377, 1887, 2468
HindIII	AAGCTT	3 cut(s)	581, 2342, 2566
HinfI	GANTC	8 cut(s)	272, 380, 527, 1070, 1340, 1783, 2405, 2489
HpaII	CCGG	8 cut(s)	212, 691, 838, 1030, 1172, 1249, 1424, 1881
HphI	GGTGA	8 cut(s)	382, 446, 854, 1046, 1097, 1409, 1413, 2447
Hpy166II	GTNNAC	3 cut(s)	1292, 2074, 2435
Hpy8I	GTNNAC	3 cut(s)	1292, 2074, 2435
Hpy99I	CGWCG	2 cut(s)	502, 1206
HpyCH4IV	ACGT	3 cut(s)	1154, 2088, 2437
HpyF3I	CTNAG	9 cut(s)	426, 735, 851, 1018, 1258, 1797, 1857, 2370, 2527
HpySE526I	ACGT	3 cut(s)	1154, 2088, 2437
HspAI	GCGC	4 cut(s)	855, 1377, 1887, 2468
Kpn2I	TCCGGA	1 cut(s)	1248
Ksp22I	TGATCA	1 cut(s)	1158
LguI	GCTCTTC	1 cut(s)	822
LmnI	GCTCC	4 cut(s)	204, 958, 2050, 2553
LweI	GCATC	3 cut(s)	841, 1994, 2347
MabI	ACCWGGT	1 cut(s)	1183
MaeI	CTAG	4 cut(s)	1133, 1973, 2174, 2316
MaeII	ACGT	3 cut(s)	1154, 2088, 2437
MaeIII	GTNAC	7 cut(s)	112, 809, 905, 913, 1052, 2147, 2365
MbiI	CCGCTC	2 cut(s)	354, 2559
MfeI	CAATTG	1 cut(s)	1380
MflI	RGATCY	5 cut(s)	574, 687, 1254, 1804, 2227
MhlI	GDGCHC	4 cut(s)	412, 462, 1145, 2418
MlsI	TGGCCA	2 cut(s)	710, 1192
MluNI	TGGCCA	2 cut(s)	710, 1192
MlyI	GAGTC	5 cut(s)	266, 374, 521, 1079, 2483
MmeI	TCCRAC	1 cut(s)	1802
Mox20I	TGGCCA	2 cut(s)	710, 1192
Mph1103I	ATGCAT	1 cut(s)	2098
MroI	TCCGGA	1 cut(s)	1248
MscI	TGGCCA	2 cut(s)	710, 1192
MslI	CAYNNNNRTG	1 cut(s)	1908
Msp20I	TGGCCA	2 cut(s)	710, 1192
MspA1I	CMGCKG	1 cut(s)	342
MspI	CCGG	8 cut(s)	212, 691, 838, 1030, 1172, 1249, 1424, 1881
MspR9I	CCNGG	6 cut(s)	432, 1030, 1185, 1508, 2255, 2380
MunI	CAATTG	1 cut(s)	1380
Mva1269I	GAATGC	1 cut(s)	1297
MvaI	CCWGG	5 cut(s)	432, 1185, 1508, 2255, 2380
MvnI	CGCG	1 cut(s)	441
NciI	CCSGG	1 cut(s)	1030
NcoI	CCATGG	2 cut(s)	1789, 2397
NdeI	CATATG	1 cut(s)	931
NlaIV	GGNNCC	6 cut(s)	1247, 1806, 2029, 2046, 2321, 2555
NmuCI	GTSAC	7 cut(s)	112, 809, 905, 913, 1052, 2147, 2365
NsiI	ATGCAT	1 cut(s)	2098
NspI	RCATGY	4 cut(s)	329, 2013, 2306, 2433
PaeR7I	CTCGAG	1 cut(s)	2114
PaqCI	CACCTGC	1 cut(s)	559
PceI	AGGCCT	1 cut(s)	1862
PciI	ACATGT	1 cut(s)	2429
PciSI	GCTCTTC	1 cut(s)	822
PctI	GAATGC	1 cut(s)	1297
PfeI	GAWTC	3 cut(s)	1340, 1783, 2405
PleI	GAGTC	5 cut(s)	266, 374, 521, 1078, 2483
PpsI	GAGTC	5 cut(s)	266, 374, 521, 1078, 2483
PscI	ACATGT	1 cut(s)	2429
Psp124BI	GAGCTC	1 cut(s)	1145
Psp6I	CCWGG	5 cut(s)	430, 1183, 1506, 2253, 2378
PspGI	CCWGG	5 cut(s)	430, 1183, 1506, 2253, 2378
PspN4I	GGNNCC	6 cut(s)	1247, 1806, 2029, 2046, 2321, 2555
PspPI	GGNCC	6 cut(s)	1032, 1246, 2184, 2257, 2319, 2376
PspXI	VCTCGAGB	1 cut(s)	2114
PstI	CTGCAG	3 cut(s)	596, 1066, 2451
PsuI	RGATCY	5 cut(s)	574, 687, 1254, 1804, 2227
PvuII	CAGCTG	1 cut(s)	342
RsaI	GTAC	5 cut(s)	102, 716, 891, 1478, 2109
RsaNI	GTAC	5 cut(s)	101, 715, 890, 1477, 2108
RseI	CAYNNNNRTG	1 cut(s)	1908
SacI	GAGCTC	1 cut(s)	1145
SapI	GCTCTTC	1 cut(s)	822
Sau96I	GGNCC	6 cut(s)	1032, 1246, 2184, 2257, 2319, 2376
ScaI	AGTACT	3 cut(s)	716, 891, 1478
SchI	GAGTC	5 cut(s)	266, 374, 521, 1079, 2483
ScrFI	CCNGG	6 cut(s)	432, 1030, 1185, 1508, 2255, 2380
SduI	GDGCHC	4 cut(s)	412, 462, 1145, 2418
SexAI	ACCWGGT	1 cut(s)	1183
SfaNI	GCATC	3 cut(s)	841, 1994, 2347
SfcI	CTRYAG	4 cut(s)	592, 1062, 1104, 2447
Sfr274I	CTCGAG	1 cut(s)	2114
SinI	GGWCC	2 cut(s)	1246, 2376
SlaI	CTCGAG	1 cut(s)	2114
SmiMI	CAYNNNNRTG	1 cut(s)	1908
SmlI	CTYRAG	2 cut(s)	578, 2114
SmoI	CTYRAG	2 cut(s)	578, 2114
SseBI	AGGCCT	1 cut(s)	1862
SspI	AATATT	1 cut(s)	1927
SspMI	CTAG	4 cut(s)	1133, 1973, 2174, 2316
SstI	GAGCTC	1 cut(s)	1145
StuI	AGGCCT	1 cut(s)	1862
StyD4I	CCNGG	6 cut(s)	430, 1028, 1183, 1506, 2253, 2378
StyI	CCWWGG	4 cut(s)	817, 1789, 1863, 2397
TaiI	ACGT	3 cut(s)	1157, 2091, 2440
TaqI	TCGA	8 cut(s)	383, 484, 698, 1201, 1317, 2115, 2418, 2571
TaqII	GACCGA	1 cut(s)	1236
TatI	WGTACW	5 cut(s)	100, 714, 889, 1476, 2107
TauI	GCSGC	3 cut(s)	354, 1954, 2559
TfiI	GAWTC	3 cut(s)	1340, 1783, 2405
TscAI	CASTG	9 cut(s)	293, 876, 910, 916, 1119, 1200, 2020, 2152, 2209
TseFI	GTSAC	7 cut(s)	112, 809, 905, 913, 1052, 2147, 2365
Tsp45I	GTSAC	7 cut(s)	112, 809, 905, 913, 1052, 2147, 2365
TspDTI	ATGAA	8 cut(s)	486, 627, 912, 1335, 1485, 1540, 2047, 2381
TspGWI	ACGGA	1 cut(s)	233
TspRI	CASTG	9 cut(s)	293, 876, 910, 916, 1119, 1200, 2020, 2152, 2209
VpaK11BI	GGWCC	2 cut(s)	1246, 2376
XapI	RAATTY	2 cut(s)	615, 634
XceI	RCATGY	4 cut(s)	329, 2013, 2306, 2433
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1239
XhoI	CTCGAG	1 cut(s)	2114
XmiI	GTMKAC	1 cut(s)	1291
XspI	CTAG	4 cut(s)	1133, 1973, 2174, 2316
ZrmI	AGTACT	3 cut(s)	716, 891, 1478
Zsp2I	ATGCAT	1 cut(s)	2098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.