Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0007645

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG390400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGCTTCAAGTTGGGTATGGTGGGGGAGAAGCTGAGATGGATAAGGGACGTTCTGTTGTCGTGGGAGTGAAGCTGGACTCCAAGAGCAGAGAGCTGCTGACGTGGGCTCTCGTCAAGGTGGCCGAGCCCGGTGACTCTGTTATTGCTATTCACGTTCTTGAAATTGTGGATCGAGATGGGAAGTCGTCGCTTCTATCACTCGTCAAAGCTTTTGACTCTGTTCTTGCTGTGTATGAAGGCTTCTGTAATTTGAAGCAGGTGGATCTCAAGCTTAAAATTTGCAGAGGAACATCAATAAAGAAGATTCTAGTCCGGGAAGCGAAATCTTATAATGCATGCAAATTTATAGTGGGAACTGCTCAGAGCCACCATAAAATCCGGTCATCCACCACCGTGGCCAAGTACTGTGCGAAGAAACTGTCAAAGGATTGTGGGATACTTGCTGTAAATAATGGGAAAGTTGTGTTTAACAGGGAGGGCTCTCAATCAAGTTGTGACTCTCAAGGAAGTGGAGAGCATCACCGAAATGGTATGCTCAGTGCATTTCACAGATCACTGCATAAGTCTTCAAAAGTACTAAATGAAGGCAGTGACAATCTGGCCTCAAAGAAAGCAAATGATCAGGTCAATTGTAAGAAAATGGAGCAGACATTAGCTAAAATCTTTTTCGAATGTACAGACACGGTTGAGAAACAGAAATGCTCGGCTTGTTCACGGCCCTCTGTGGATAATTCTAGTCACCAATCTGCTGAAGACTCTTCTGCTGACGATGGTGAAGATAAATCCATGGCTATAGTGCCTGTACAAAGAGAAGAGGCAGAAAAAGCAGGTTCAATTACTATGTTGATCAAAGAATTACCTGAAGCAAGACCTGGTTGGCCACTGCTTCGTCGTGCTGTGATACCAGACCCTTCGGAGAGGTCTATGGTTCGGAAGATCTCGGTGGTTCAGTGGGCAATGCAATTGCCTAGTCGGCGTCATAGACAAAATAGTTGTGATCCAGGGGAAGATCAACCTTCTAGTTTGGATGGAGAAACTGGTGCAATTGTTCCAGTGGATAGTGAGGCAATGACTGCCCCATCTTCACCTGATCACTATTCGAAAGGCTTGCCTAGAGAATTGGAGGGTCTGCATGAGAAGTACTCATCTACTTGCAGATTGTTCAATTACCAGGAACTTCAGTCAGCAACATCATATTTCTTGGCTGAAAATCTGATTGGGAGAGGCGGCAGTAGTCAAGTTTATAAAGGCTGCCTTCCTGATGCCAAGGAACTTGCTGTTAAAATCTTAAAACCATCTGAAGATGTATTGAAGGAGTTTGTTCTGGAAATAGAGATTATCACTACCTTAAATCACAAGAACATTATTTCCCTTCTGGGCTTCTGTTTTGAGGATAACAATCTTCTCTTGGTTTATGATTTCTTATCAAGAGGAAGCCTCGAGGAGAATCTCCATGGAAGTAAGAAAGATCCAAATGCATTTGGTTGGAATGAGAGATATAAGGTGGCTGTGGGTGTAGCTGAGGCCTTGGATTATCTGCACAGTGGCAGTGCTCAACCAGTAATCCACAGGGATGTTAAATCATCCAATATACTGTTATCTGATGATTTTGAGCCACAGCTCTCTGATTTTGGACTGGCTAAGTGGGCACCAACCTCCTCATCACATATAACATGCACTGATGTTGCAGGCACATTTGGATACTTGGCTCCTGAGTACTTTATGTATGGCAAAGTAAACGAGAAGATTGACGTGTATGCATTTGGTGTTGTACTCCTTGAACTTCTTTCAGGAAGAAAACCTATAAGCAGTGACTATCTGAAGGGCCATGAGAGCCTAGTCATGTGGGCTAAGCCAATTTTAAATGGTGGGAAGGTGGCCCAACTATTAGATCCGAGCTTGGGAAAGTACGATCAAGTCCAAGTGGAGAGAATGGTTTTAGCAGCTACTCTTTGTATCAGACATGCCCCAAGAGCAAGGCCCCAAATGAGTTCTGTTGTGAAGCTCCTTCAAGGTGATGCAGAAATGATTAAGTGGGCAAGGCTACAAGTCCATGCTTGGGAGGAATCTGATATCCATGACGATGAGCCTTGTCCACGTTCGAATCTGCAGTCTCACCTTAACCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCGTAAGCAGCATTGAGCAAACCGTCTCCTTAGAGGACTACCTCAAAGGCCGGTGGAGCCGCTCATCAAGCTTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Usp

Protein Analysis

745

Amino Acids

82.2

Weight (kDa)

6.13

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	403 - 605	4.6e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	404 - 669	2.4e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77280 AT1G77280
fragaria_vesca	FvH4_2g27940 FvH4_2g27940 FvH4_2g27940 FvH4_2g27940
malus_domestica	MD08G1160300.v1.1 MD08G1160400.v1.1 MD15G1133500.v1.1
prunus_persica	Prupe.1G489100_v2.0.a1 Prupe.1G489100_v2.0.a1
pyrus_communis	pycom08g13520 pycom15g12030
rosa_chinensis	RchiOBHm_Chr6g0296761
rosa_laevigata	RLG00000011661
rosa_multiflora	Rmu_ssc0000192.1_g000010
rosa_roxburghii	Rroxscaffold_7G00171190
rosa_rugosa	Rorug06G0265700 Rorug06G0265800
rosa_samantha	Rh6AG376800 Rh6BG385100 Rh6CG390400 Rh6DG377500
rosa_wichuraiana	Rw6G032940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	330, 1245
AarI	CACCTGC	1 cut(s)	247
AbsI	CCTCGAGG	1 cut(s)	1439
Acc36I	ACCTGC	2 cut(s)	247, 818
AccB1I	GGYRCC	1 cut(s)	1648
AccBSI	CCGCTC	1 cut(s)	2220
AciI	CCGC	2 cut(s)	1227, 2218
AclWI	GGATC	5 cut(s)	177, 270, 992, 1463, 1886
AcoI	YGGCCR	3 cut(s)	120, 396, 878
AcsI	RAATTY	2 cut(s)	276, 341
AcuI	CTGAAG	5 cut(s)	771, 882, 1163, 1320, 1841
AcyI	GRCGYC	1 cut(s)	976
AfaI	GTAC	8 cut(s)	404, 576, 676, 804, 1142, 1718, 1773, 1910
AfiI	CCNNNNNNNGG	2 cut(s)	1901, 2059
AflIII	ACRYGT	1 cut(s)	1752
AgsI	TTSAA	9 cut(s)	8, 161, 253, 570, 834, 1165, 1312, 1781, 2012
AjiI	CACGTC	2 cut(s)	102, 1753
AjnI	CCWGG	3 cut(s)	871, 1000, 1170
AjuI	GAANNNNNNNTTGG	2 cut(s)	1200, 1232
AleI	CACNNNNGTG	1 cut(s)	392
AloI	GAACNNNNNNTCC	2 cut(s)	1352, 1384
Alw21I	GWGCWC	1 cut(s)	1555
Alw26I	GTCTC	2 cut(s)	2118, 2188
AlwI	GGATC	5 cut(s)	177, 270, 992, 1463, 1886
Ama87I	CYCGRG	1 cut(s)	1439
ApeKI	GCWGC	4 cut(s)	94, 1251, 1943, 2166
ApoI	RAATTY	2 cut(s)	276, 341
ArsI	GACNNNNNNTTYG	4 cut(s)	404, 436, 2096, 2128
AspS9I	GGNCC	4 cut(s)	717, 1825, 1879, 1980
AsuC2I	CCSGG	2 cut(s)	129, 314
AsuHPI	GGTGA	7 cut(s)	143, 512, 731, 785, 1077, 2027, 2108
AsuII	TTCGAA	3 cut(s)	669, 1100, 2102
AvaI	CYCGRG	1 cut(s)	1439
BaeGI	GKGCMC	1 cut(s)	1651
BalI	TGGCCA	2 cut(s)	398, 880
BanI	GGYRCC	1 cut(s)	1648
BanII	GRGCYC	3 cut(s)	109, 129, 482
BarI	GAAGNNNNNNTAC	2 cut(s)	224, 256
BbsI	GAAGAC	2 cut(s)	558, 759
Bbv12I	GWGCWC	1 cut(s)	1555
BbvCI	CCTCAGC	1 cut(s)	1521
BbvI	GCAGC	4 cut(s)	81, 1238, 1955, 2178
BccI	CCATC	6 cut(s)	31, 170, 764, 1022, 1087, 1303
BceAI	ACGGC	1 cut(s)	731
BcgI	CGANNNNNNTGC	2 cut(s)	1090, 1124
BciT130I	CCWGG	3 cut(s)	873, 1002, 1172
BciVI	GTATCC	2 cut(s)	429, 1694
BclI	TGATCA	3 cut(s)	619, 846, 1090
BcnI	CCSGG	2 cut(s)	129, 314
BcoDI	GTCTC	2 cut(s)	2118, 2188
BfaI	CTAG	6 cut(s)	308, 735, 969, 1020, 1113, 1838
BfmI	CTRYAG	2 cut(s)	792, 2108
BfuAI	ACCTGC	2 cut(s)	247, 818
BfuI	GTATCC	2 cut(s)	429, 1694
BglI	GCCNNNNNGGC	1 cut(s)	973
BglII	AGATCT	1 cut(s)	936
BisI	GCNGC	6 cut(s)	95, 1228, 1252, 1944, 2167, 2218
BlpI	GCTNAGC	1 cut(s)	1851
BlsI	GCNGC	6 cut(s)	96, 1229, 1253, 1945, 2168, 2219
BmcAI	AGTACT	4 cut(s)	404, 576, 1142, 1718
Bme1390I	CCNGG	5 cut(s)	129, 314, 873, 1002, 1172
BmeT110I	CYCGRG	1 cut(s)	1439
BmgBI	CACGTC	2 cut(s)	102, 1753
BmgT120I	GGNCC	4 cut(s)	717, 1825, 1879, 1980
BmiI	GGNNCC	4 cut(s)	1650, 1710, 1982, 2216
BmrFI	CCNGG	5 cut(s)	129, 314, 873, 1002, 1172
BmsI	GCATC	3 cut(s)	526, 1252, 2008
BpiI	GAAGAC	2 cut(s)	558, 759
BplI	GAGNNNNNCTC	6 cut(s)	1127, 1159, 1422, 1454, 2135, 2167
Bpu10I	CCTNAGC	1 cut(s)	1521
Bpu1102I	GCTNAGC	1 cut(s)	1851
Bpu14I	TTCGAA	3 cut(s)	669, 1100, 2102
BpuEI	CTTGAG	2 cut(s)	251, 486
BpuMI	CCSGG	2 cut(s)	129, 314
BsaBI	GATNNNNATC	1 cut(s)	1398
BsaHI	GRCGYC	1 cut(s)	976
BsaJI	CCNNGG	6 cut(s)	393, 786, 1001, 1266, 1453, 1527
BsaWI	WCCGGW	1 cut(s)	378
BsaXI	ACNNNNNCTCC	2 cut(s)	2141, 2171
Bsc4I	CCNNNNNNNGG	2 cut(s)	1901, 2059
Bse118I	RCCGGY	1 cut(s)	2208
Bse1I	ACTGG	4 cut(s)	1042, 1052, 1559, 1641
Bse3DI	GCAATG	2 cut(s)	963, 1074
Bse8I	GATNNNNATC	1 cut(s)	1398
BseBI	CCWGG	3 cut(s)	873, 1002, 1172
BseDI	CCNNGG	6 cut(s)	393, 786, 1001, 1266, 1453, 1527
BseGI	GGATG	5 cut(s)	383, 1033, 1579, 1583, 2152
BseJI	GATNNNNATC	1 cut(s)	1398
BseLI	CCNNNNNNNGG	2 cut(s)	1901, 2059
BseMI	GCAATG	2 cut(s)	963, 1074
BseMII	CTCAG	5 cut(s)	24, 374, 550, 1512, 1704
BseNI	ACTGG	4 cut(s)	1042, 1052, 1559, 1641
BseRI	GAGGAG	2 cut(s)	1457, 1648
BseSI	GKGCMC	1 cut(s)	1651
BseXI	GCAGC	4 cut(s)	81, 1238, 1955, 2178
BsgI	GTGCAG	1 cut(s)	1523
BshNI	GGYRCC	1 cut(s)	1648
BsiHKAI	GWGCWC	1 cut(s)	1555
BsiHKCI	CYCGRG	1 cut(s)	1439
BsiSI	CCGG	4 cut(s)	129, 313, 379, 2209
BslFI	GGGAC	1 cut(s)	60
BslI	CCNNNNNNNGG	2 cut(s)	1901, 2059
BsmAI	GTCTC	2 cut(s)	2118, 2188
BsmBI	CGTCTC	1 cut(s)	2188
BsmFI	GGGAC	1 cut(s)	60
BsoBI	CYCGRG	1 cut(s)	1439
Bsp119I	TTCGAA	3 cut(s)	669, 1100, 2102
Bsp1286I	GDGCHC	5 cut(s)	109, 129, 482, 1555, 1651
Bsp1407I	TGTACA	2 cut(s)	674, 802
Bsp1720I	GCTNAGC	1 cut(s)	1851
Bsp19I	CCATGG	2 cut(s)	786, 1453
BspACI	CCGC	2 cut(s)	1227, 2218
BspCNI	CTCAG	5 cut(s)	25, 373, 549, 1513, 1705
BspLI	GGNNCC	4 cut(s)	1650, 1710, 1982, 2216
BspMAI	CTGCAG	1 cut(s)	2112
BspMI	ACCTGC	2 cut(s)	247, 818
BspPI	GGATC	5 cut(s)	177, 270, 992, 1463, 1886
BspT104I	TTCGAA	3 cut(s)	669, 1100, 2102
BspT107I	GGYRCC	1 cut(s)	1648
BsrBI	CCGCTC	1 cut(s)	2220
BsrDI	GCAATG	2 cut(s)	963, 1074
BsrFI	RCCGGY	1 cut(s)	2208
BsrGI	TGTACA	2 cut(s)	674, 802
BsrI	ACTGG	4 cut(s)	1042, 1052, 1559, 1641
BssAI	RCCGGY	1 cut(s)	2208
BssECI	CCNNGG	6 cut(s)	393, 786, 1001, 1266, 1453, 1527
BssNI	GRCGYC	1 cut(s)	976
BssT1I	CCWWGG	4 cut(s)	786, 1266, 1453, 1527
Bst2UI	CCWGG	3 cut(s)	873, 1002, 1172
Bst4CI	ACNGT	7 cut(s)	394, 407, 420, 685, 1544, 1596, 2182
Bst6I	CTCTTC	2 cut(s)	763, 807
BstACI	GRCGYC	1 cut(s)	976
BstAPI	GCANNNNNTGC	1 cut(s)	1073
BstAUI	TGTACA	2 cut(s)	674, 802
BstBI	TTCGAA	3 cut(s)	669, 1100, 2102
BstC8I	GCNNGC	3 cut(s)	337, 1109, 1690
BstDEI	CTNAG	8 cut(s)	33, 360, 536, 1521, 1641, 1713, 1851, 2188
BstDSI	CCRYGG	3 cut(s)	393, 786, 1453
BstF5I	GGATG	5 cut(s)	383, 1033, 1579, 1583, 2152
BstMAI	GTCTC	2 cut(s)	2118, 2188
BstMWI	GCNNNNNNNGC	8 cut(s)	824, 973, 1073, 1646, 1833, 1973, 2214, 2226
BstNI	CCWGG	3 cut(s)	873, 1002, 1172
BstNSI	RCATGY	3 cut(s)	339, 1677, 1967
BstSCI	CCNGG	5 cut(s)	127, 312, 871, 1000, 1170
BstSFI	CTRYAG	2 cut(s)	792, 2108
BstSLI	GKGCMC	1 cut(s)	1651
BstV1I	GCAGC	4 cut(s)	81, 1238, 1955, 2178
BstV2I	GAAGAC	2 cut(s)	558, 759
BstX2I	RGATCY	4 cut(s)	262, 936, 1468, 1891
BstXI	CCANNNNNNTGG	1 cut(s)	394
BstYI	RGATCY	4 cut(s)	262, 936, 1468, 1891
BsuI	GTATCC	2 cut(s)	429, 1694
BtgI	CCRYGG	3 cut(s)	393, 786, 1453
BtrI	CACGTC	2 cut(s)	102, 1753
BtsCI	GGATG	5 cut(s)	383, 1033, 1579, 1583, 2152
BtsI	GCAGTG	6 cut(s)	554, 595, 881, 1555, 1816, 2129
BveI	ACCTGC	2 cut(s)	247, 818
Cac8I	GCNNGC	3 cut(s)	337, 1109, 1690
Cfr10I	RCCGGY	1 cut(s)	2208
Cfr13I	GGNCC	4 cut(s)	717, 1825, 1879, 1980
CseI	GACGC	1 cut(s)	965
CsiI	ACCWGGT	1 cut(s)	871
Csp6I	GTAC	8 cut(s)	403, 575, 675, 803, 1141, 1717, 1772, 1909
CviQI	GTAC	8 cut(s)	403, 575, 675, 803, 1141, 1717, 1772, 1909
DdeI	CTNAG	8 cut(s)	33, 360, 536, 1521, 1641, 1713, 1851, 2188
DraI	TTTAAA	1 cut(s)	1863
EaeI	YGGCCR	3 cut(s)	120, 396, 878
Eam1104I	CTCTTC	2 cut(s)	763, 807
EarI	CTCTTC	2 cut(s)	763, 807
Eco130I	CCWWGG	4 cut(s)	786, 1266, 1453, 1527
Eco147I	AGGCCT	1 cut(s)	1526
Eco24I	GRGCYC	3 cut(s)	109, 129, 482
Eco32I	GATATC	1 cut(s)	2074
Eco57I	CTGAAG	5 cut(s)	771, 882, 1163, 1320, 1841
Eco88I	CYCGRG	1 cut(s)	1439
EcoO109I	RGGNCCY	1 cut(s)	1980
EcoRII	CCWGG	3 cut(s)	871, 1000, 1170
EcoRV	GATATC	1 cut(s)	2074
EcoT14I	CCWWGG	4 cut(s)	786, 1266, 1453, 1527
EcoT22I	ATGCAT	3 cut(s)	337, 1480, 1762
EcoT38I	GRGCYC	3 cut(s)	109, 129, 482
ErhI	CCWWGG	4 cut(s)	786, 1266, 1453, 1527
Esp3I	CGTCTC	1 cut(s)	2188
FalI	AAGNNNNNCTT	2 cut(s)	1239, 1271
FaqI	GGGAC	1 cut(s)	60
FbaI	TGATCA	3 cut(s)	619, 846, 1090
Fnu4HI	GCNGC	6 cut(s)	95, 1228, 1252, 1944, 2167, 2218
FokI	GGATG	5 cut(s)	370, 1040, 1570, 1586, 2159
FriOI	GRGCYC	3 cut(s)	109, 129, 482
Fsp4HI	GCNGC	6 cut(s)	95, 1228, 1252, 1944, 2167, 2218
FspBI	CTAG	6 cut(s)	308, 735, 969, 1020, 1113, 1838
GluI	GCNGC	6 cut(s)	95, 1228, 1252, 1944, 2167, 2218
HapII	CCGG	4 cut(s)	129, 313, 379, 2209
HgaI	GACGC	1 cut(s)	965
Hin1I	GRCGYC	1 cut(s)	976
HindIII	AAGCTT	3 cut(s)	207, 269, 2227
HpaII	CCGG	4 cut(s)	129, 313, 379, 2209
HphI	GGTGA	7 cut(s)	143, 512, 731, 785, 1077, 2027, 2108
Hpy166II	GTNNAC	3 cut(s)	713, 1738, 2096
Hpy188III	TCNNGA	7 cut(s)	158, 173, 1259, 1325, 1428, 1712, 1791
Hpy8I	GTNNAC	3 cut(s)	713, 1738, 2096
Hpy99I	CGWCG	2 cut(s)	190, 894
HpyCH4III	ACNGT	7 cut(s)	394, 407, 420, 685, 1544, 1596, 2182
HpyCH4IV	ACGT	5 cut(s)	49, 101, 153, 1752, 2098
HpyF10VI	GCNNNNNNNGC	8 cut(s)	824, 973, 1073, 1646, 1833, 1973, 2214, 2226
HpyF3I	CTNAG	8 cut(s)	33, 360, 536, 1521, 1641, 1713, 1851, 2188
HpySE526I	ACGT	5 cut(s)	49, 101, 153, 1752, 2098
Hsp92I	GRCGYC	1 cut(s)	976
Ksp22I	TGATCA	3 cut(s)	619, 846, 1090
LmnI	GCTCC	4 cut(s)	643, 1714, 2010, 2214
Lsp1109I	GCAGC	4 cut(s)	81, 1238, 1955, 2178
LweI	GCATC	3 cut(s)	526, 1252, 2008
MabI	ACCWGGT	1 cut(s)	871
MaeI	CTAG	6 cut(s)	308, 735, 969, 1020, 1113, 1838
MaeII	ACGT	5 cut(s)	49, 101, 153, 1752, 2098
MaeIII	GTNAC	5 cut(s)	131, 494, 590, 737, 1811
MbiI	CCGCTC	1 cut(s)	2220
MfeI	CAATTG	3 cut(s)	628, 962, 1044
MflI	RGATCY	4 cut(s)	262, 936, 1468, 1891
MhlI	GDGCHC	5 cut(s)	109, 129, 482, 1555, 1651
MlsI	TGGCCA	2 cut(s)	398, 880
MluNI	TGGCCA	2 cut(s)	398, 880
MlyI	GAGTC	6 cut(s)	71, 128, 209, 491, 749, 2144
MmeI	TCCRAC	1 cut(s)	1466
Mox20I	TGGCCA	2 cut(s)	398, 880
Mph1103I	ATGCAT	3 cut(s)	337, 1480, 1762
MscI	TGGCCA	2 cut(s)	398, 880
MseI	TTAA	9 cut(s)	273, 468, 1281, 1289, 1349, 1578, 1862, 2031, 2121
MslI	CAYNNNNRTG	4 cut(s)	392, 525, 1572, 2082
Msp20I	TGGCCA	2 cut(s)	398, 880
MspI	CCGG	4 cut(s)	129, 313, 379, 2209
MspR9I	CCNGG	5 cut(s)	129, 314, 873, 1002, 1172
MunI	CAATTG	3 cut(s)	628, 962, 1044
MvaI	CCWGG	3 cut(s)	873, 1002, 1172
MwoI	GCNNNNNNNGC	8 cut(s)	824, 973, 1073, 1646, 1833, 1973, 2214, 2226
NciI	CCSGG	2 cut(s)	129, 314
NcoI	CCATGG	2 cut(s)	786, 1453
NlaIV	GGNNCC	4 cut(s)	1650, 1710, 1982, 2216
NmeAIII	GCCGAG	2 cut(s)	148, 683
NmuCI	GTSAC	5 cut(s)	131, 494, 590, 737, 1811
NsiI	ATGCAT	3 cut(s)	337, 1480, 1762
NspI	RCATGY	3 cut(s)	339, 1677, 1967
NspV	TTCGAA	3 cut(s)	669, 1100, 2102
OliI	CACNNNNGTG	1 cut(s)	392
PaeI	GCATGC	1 cut(s)	339
PaeR7I	CTCGAG	1 cut(s)	1439
PaqCI	CACCTGC	1 cut(s)	247
PceI	AGGCCT	1 cut(s)	1526
PfeI	GAWTC	4 cut(s)	304, 1447, 2066, 2104
PfoI	TCCNGGA	1 cut(s)	312
PkrI	GCNGC	6 cut(s)	96, 1229, 1253, 1945, 2168, 2219
PleI	GAGTC	6 cut(s)	71, 128, 209, 491, 749, 2144
PpsI	GAGTC	6 cut(s)	71, 128, 209, 491, 749, 2144
PsiI	TTATAA	2 cut(s)	330, 1245
Psp6I	CCWGG	3 cut(s)	871, 1000, 1170
PspGI	CCWGG	3 cut(s)	871, 1000, 1170
PspN4I	GGNNCC	4 cut(s)	1650, 1710, 1982, 2216
PspPI	GGNCC	4 cut(s)	717, 1825, 1879, 1980
PspXI	VCTCGAGB	1 cut(s)	1439
PstI	CTGCAG	1 cut(s)	2112
PsuI	RGATCY	4 cut(s)	262, 936, 1468, 1891
RsaI	GTAC	8 cut(s)	404, 576, 676, 804, 1142, 1718, 1773, 1910
RsaNI	GTAC	8 cut(s)	403, 575, 675, 803, 1141, 1717, 1772, 1909
RseI	CAYNNNNRTG	4 cut(s)	392, 525, 1572, 2082
SaqAI	TTAA	9 cut(s)	273, 468, 1281, 1289, 1349, 1578, 1862, 2031, 2121
SatI	GCNGC	6 cut(s)	95, 1228, 1252, 1944, 2167, 2218
Sau96I	GGNCC	4 cut(s)	717, 1825, 1879, 1980
ScaI	AGTACT	4 cut(s)	404, 576, 1142, 1718
SchI	GAGTC	6 cut(s)	71, 128, 209, 491, 749, 2144
ScrFI	CCNGG	5 cut(s)	129, 314, 873, 1002, 1172
SduI	GDGCHC	5 cut(s)	109, 129, 482, 1555, 1651
SexAI	ACCWGGT	1 cut(s)	871
SfaNI	GCATC	3 cut(s)	526, 1252, 2008
SfcI	CTRYAG	2 cut(s)	792, 2108
Sfr274I	CTCGAG	1 cut(s)	1439
SfuI	TTCGAA	3 cut(s)	669, 1100, 2102
SlaI	CTCGAG	1 cut(s)	1439
SmiMI	CAYNNNNRTG	4 cut(s)	392, 525, 1572, 2082
SmlI	CTYRAG	3 cut(s)	266, 501, 1439
SmoI	CTYRAG	3 cut(s)	266, 501, 1439
SphI	GCATGC	1 cut(s)	339
SseBI	AGGCCT	1 cut(s)	1526
SsiI	CCGC	2 cut(s)	1227, 2218
SspMI	CTAG	6 cut(s)	308, 735, 969, 1020, 1113, 1838
StuI	AGGCCT	1 cut(s)	1526
StyD4I	CCNGG	5 cut(s)	127, 312, 871, 1000, 1170
StyI	CCWWGG	4 cut(s)	786, 1266, 1453, 1527
TaaI	ACNGT	7 cut(s)	394, 407, 420, 685, 1544, 1596, 2182
TaiI	ACGT	5 cut(s)	52, 104, 156, 1755, 2101
TaqI	TCGA	5 cut(s)	172, 669, 1100, 1440, 2102
TatI	WGTACW	7 cut(s)	402, 574, 674, 802, 1140, 1716, 1771
TauI	GCSGC	2 cut(s)	1230, 2220
TfiI	GAWTC	4 cut(s)	304, 1447, 2066, 2104
Tru1I	TTAA	9 cut(s)	273, 468, 1281, 1289, 1349, 1578, 1862, 2031, 2121
Tru9I	TTAA	9 cut(s)	273, 468, 1281, 1289, 1349, 1578, 1862, 2031, 2121
TseFI	GTSAC	5 cut(s)	131, 494, 590, 737, 1811
TseI	GCWGC	4 cut(s)	94, 1251, 1943, 2166
Tsp45I	GTSAC	5 cut(s)	131, 494, 590, 737, 1811
TspDTI	ATGAA	2 cut(s)	249, 597
TspGWI	ACGGA	1 cut(s)	2149
XapI	RAATTY	2 cut(s)	276, 341
XceI	RCATGY	3 cut(s)	339, 1677, 1967
XhoI	CTCGAG	1 cut(s)	1439
XspI	CTAG	6 cut(s)	308, 735, 969, 1020, 1113, 1838
ZrmI	AGTACT	4 cut(s)	404, 576, 1142, 1718
Zsp2I	ATGCAT	3 cut(s)	337, 1480, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.