Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007645

Physical Location & Seq

Genomic Coordinates Reverse (-)

11516278 .. 11520681

Gene Structure 4404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00171190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGCTTCAAGTTGGGTATGGTGGGGGAGAAGCTGAGATGGATAAGGGACGTTCTGTTGTCGTGGGAGTGAAGCTGGACTCCAAGAGCAGAGAGCTGCTGACGTGGGCTCTAGTCAAGGTGGCAGAGCCCGGTGACTCTGTTATTGCTCTTCACGTTCTTGGTAAAAATGAAATTGTGGATCGAGATGGGAAGTCGTCGCTTCTATCACTCGTCAAAGCTTTTGACTCTGTTCTTGCTGTGTATGAAGGCTTCTGTAATTTGAAGCAGGTGGATCTCAAGCTTAAAATTTGCAGGGGAACATCAATAAAGAAGATTCTAGTCCGGGAAGCGAAATCTTTTAATGCATGCAAATTTATAGTGGGAACTGCTCAGAGCCACCATAAAATCCGGTCATCCACCACCGTGGCCAAGTACTGTGCTAAGAAACTGTCAAAGGATTGTGGGATACTTGCTGTAAATAATGGGAAAGTTGTGTTTAACAGGGAGGGCTCTCAATCAAGTTGTGACTCTCAAGGAAGTGGAGAGCATCGCCGAAATGGTATGCTCAGTTCATTTCACAGATCACTGCATAAGTCTTCGAAAGTACTAAATGAAGGCAGTGACAATCTGGCCTCAAAGAAAGCAAATGATCAGGTCAATTGTAAGAAAATGGAGCAGACATTAGCTAAAATCTTTTTCGAATGTACAGACACGGTTGAGAAACAGAAATGCTCAGTTTGTTCACGGCCCTCTGTGGATAATTCTAGTCACCAATCTGATGAAGACTCTTCTGCTGAGGATGGTGAAGATAAATCCATGGCTATAGTGCCTGTACAAAGAGAAGAGGCAGAAAAAGCAGGTTCAATTACTATGTTGATCAAAGAATTACCTGAAGCAAGACCTGGTTGGCCACTGCTTCGTCGTGCTGTGTTACCAGACCCTTCGGAGAGGTCTATGGTTCGGAAGATCTCGGTGGTTCAGTGGGCAATGCAATTGCCTAGTCGGCGTCATAGACAAAATAGTTGTGATCCAGGGGAAGATCAACCTTCTAGTTTGGATGGAGAAACTGGTGCAATTGTTCCGGTGGATAGTGAGGCAATGACTGCCCCATCTTCACCTGATCACTATTCAAAAGGCTTGCCTAGAGAATTGGAGGGTCTGCATGAGAAGTACTCATCTACTTGCAGATTATTCAATTACCGGGAACTTCAGTCAGCAACATCATATTTCTTGGCTGAAAATCTGATTGGGAGAGGCGGTAGCAGTCAAGTTTATAAAGGCTGCCTTCCTGATGCCAAGGAACTTGCTGTTAAAATCTTAAAACCATCTGAAGATGTATTGAAGGAGTTTGTTCTGGAAATAGAGATTATCACTACCTTAAATCACAAGAACATTATTTCCCTTCTGGGGTTCTGTTTTGAGGATAACAATCTTCTCTTGGTTTATGATTTCTTATCAAGAGGAAGCCTCGAGGAGAATCTCCATGGAAGTAAGAAAGATCCAAATGCATTTGGTTGGAATGAGAGATATAAGGTGGCTGTGGGCGTAGCTGAGGCCTTGGATTATCTGCACAGTGGCAGTGCTCAACCACTGGGCTCTGATTTTGGACTGGCTAAGTGGGCACCAACCTCCTCATCACATATAACATGCACTGATGTTGCAGGCACATTTGGATACTTGGCTCCTGAGTACTTTATGTATGGCAAAGTAAACGAGAAGATTGACGTGTATGCATTTGGTGTTGTACTCCTTGAACTTCTTTCAGGAAGAAAACCTATAAGCAGTGACTATCTGAAGGGCCATGAGAGCCTAGTCATGTGGGCTAAGCCAATTTTAAATGGTGGGAAGGTGGCCCAACTATTAGATCCGAGCTTGGGAAAGTACGATCAAGTCCAAGTGGAGAGAATGGTTTTAGCAGCTACTCTTTGTATCAGACATGCCCCAAGAGCAAGGCCCCAAATGAGTTCTGTTGTGAAGCTTCTTCAAGGTGATGCAGAAATGATTAAGTGGGCAAGGCTACAAGTCCATGCTTGGGAGGAATCTGATATCCATGACGATGAGCCTTGTCCACGTTCGAATCTGCAGTCTCACCTTAACCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCATGAGCAGCATTGAGCAAACTGTCTCCTTAGAGGACTACCTCAGAGGCCGGTGGAGCCGCTCATCAAGCTTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Usp

Protein Analysis

729

Amino Acids

80.46

Weight (kDa)

6.38

Isoelectric Point (pI)

47.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	406 - 518	3e-15	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	407 - 518	2.2e-16	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	526 - 589	2.8e-10	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	526 - 653	6.1e-09	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77280 AT1G77280
fragaria_vesca	FvH4_2g27940 FvH4_2g27940 FvH4_2g27940 FvH4_2g27940
malus_domestica	MD08G1160300.v1.1 MD08G1160400.v1.1 MD15G1133500.v1.1
prunus_persica	Prupe.1G489100_v2.0.a1 Prupe.1G489100_v2.0.a1
pyrus_communis	pycom08g13520 pycom15g12030
rosa_chinensis	RchiOBHm_Chr6g0296761
rosa_laevigata	RLG00000011661
rosa_multiflora	Rmu_ssc0000192.1_g000010
rosa_roxburghii	Rroxscaffold_7G00171190
rosa_rugosa	Rorug06G0265700 Rorug06G0265800
rosa_samantha	Rh6AG376800 Rh6BG385100 Rh6CG390400 Rh6DG377500
rosa_wichuraiana	Rw6G032940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1254
AarI	CACCTGC	1 cut(s)	256
AbsI	CCTCGAGG	1 cut(s)	1448
Acc36I	ACCTGC	2 cut(s)	256, 827
AccB1I	GGYRCC	1 cut(s)	1600
AccBSI	CCGCTC	1 cut(s)	2172
AciI	CCGC	2 cut(s)	1236, 2170
AclWI	GGATC	5 cut(s)	186, 279, 1001, 1472, 1838
AcoI	YGGCCR	2 cut(s)	405, 887
AcsI	RAATTY	2 cut(s)	285, 350
AcuI	CTGAAG	4 cut(s)	891, 1172, 1329, 1793
AcyI	GRCGYC	1 cut(s)	985
AfaI	GTAC	8 cut(s)	413, 585, 685, 813, 1151, 1670, 1725, 1862
AfiI	CCNNNNNNNGG	3 cut(s)	1386, 1853, 2011
AflIII	ACRYGT	1 cut(s)	1704
AgsI	TTSAA	8 cut(s)	8, 262, 843, 1110, 1174, 1321, 1733, 1964
AjiI	CACGTC	2 cut(s)	102, 1705
AjnI	CCWGG	2 cut(s)	880, 1009
AjuI	GAANNNNNNNTTGG	2 cut(s)	1209, 1241
AleI	CACNNNNGTG	1 cut(s)	401
AloI	GAACNNNNNNTCC	2 cut(s)	1361, 1393
Alw21I	GWGCWC	1 cut(s)	1564
Alw26I	GTCTC	2 cut(s)	2070, 2140
AlwI	GGATC	5 cut(s)	186, 279, 1001, 1472, 1838
Ama87I	CYCGRG	1 cut(s)	1448
AoxI	GGCC	9 cut(s)	405, 609, 725, 887, 1533, 1777, 1830, 1931, 2158
ApeKI	GCWGC	4 cut(s)	94, 1260, 1895, 2118
ApoI	RAATTY	2 cut(s)	285, 350
ArsI	GACNNNNNNTTYG	2 cut(s)	2048, 2080
AspS9I	GGNCC	4 cut(s)	726, 1777, 1831, 1932
AsuC2I	CCSGG	3 cut(s)	129, 323, 1181
AsuHPI	GGTGA	6 cut(s)	143, 740, 794, 1086, 1979, 2060
AsuII	TTCGAA	3 cut(s)	578, 678, 2054
AvaI	CYCGRG	1 cut(s)	1448
BaeGI	GKGCMC	1 cut(s)	1603
BalI	TGGCCA	2 cut(s)	407, 889
BanI	GGYRCC	1 cut(s)	1600
BanII	GRGCYC	4 cut(s)	109, 129, 491, 1577
BarI	GAAGNNNNNNTAC	2 cut(s)	233, 265
BbsI	GAAGAC	2 cut(s)	567, 768
Bbv12I	GWGCWC	1 cut(s)	1564
BbvCI	CCTCAGC	2 cut(s)	774, 1530
BbvI	GCAGC	4 cut(s)	81, 1247, 1907, 2130
BccI	CCATC	6 cut(s)	31, 179, 773, 1031, 1096, 1312
BceAI	ACGGC	1 cut(s)	740
BciT130I	CCWGG	2 cut(s)	882, 1011
BciVI	GTATCC	2 cut(s)	438, 1646
BclI	TGATCA	3 cut(s)	628, 855, 1099
BcnI	CCSGG	3 cut(s)	129, 323, 1181
BcoDI	GTCTC	2 cut(s)	2070, 2140
BfaI	CTAG	7 cut(s)	110, 317, 744, 978, 1029, 1122, 1790
BfmI	CTRYAG	2 cut(s)	801, 2060
BfuAI	ACCTGC	2 cut(s)	256, 827
BfuI	GTATCC	2 cut(s)	438, 1646
BglI	GCCNNNNNGGC	1 cut(s)	982
BglII	AGATCT	1 cut(s)	945
BisI	GCNGC	5 cut(s)	95, 1261, 1896, 2119, 2170
BlpI	GCTNAGC	1 cut(s)	1803
BlsI	GCNGC	5 cut(s)	96, 1262, 1897, 2120, 2171
BmcAI	AGTACT	4 cut(s)	413, 585, 1151, 1670
Bme1390I	CCNGG	5 cut(s)	129, 323, 882, 1011, 1181
BmeT110I	CYCGRG	1 cut(s)	1448
BmgBI	CACGTC	2 cut(s)	102, 1705
BmgT120I	GGNCC	4 cut(s)	726, 1777, 1831, 1932
BmiI	GGNNCC	4 cut(s)	1602, 1662, 1934, 2168
BmrFI	CCNGG	5 cut(s)	129, 323, 882, 1011, 1181
BmrI	ACTGGG	1 cut(s)	1580
BmsI	GCATC	3 cut(s)	535, 1261, 1960
BmuI	ACTGGG	1 cut(s)	1580
BpiI	GAAGAC	2 cut(s)	567, 768
BplI	GAGNNNNNCTC	6 cut(s)	1136, 1168, 1431, 1463, 2087, 2119
Bpu10I	CCTNAGC	2 cut(s)	774, 1530
Bpu1102I	GCTNAGC	1 cut(s)	1803
Bpu14I	TTCGAA	3 cut(s)	578, 678, 2054
BpuEI	CTTGAG	2 cut(s)	260, 495
BpuMI	CCSGG	3 cut(s)	129, 323, 1181
BsaBI	GATNNNNATC	1 cut(s)	1407
BsaHI	GRCGYC	1 cut(s)	985
BsaJI	CCNNGG	6 cut(s)	402, 795, 1010, 1275, 1462, 1536
BsaWI	WCCGGW	2 cut(s)	387, 1060
BsaXI	ACNNNNNCTCC	4 cut(s)	1222, 1252, 2093, 2123
Bsc4I	CCNNNNNNNGG	3 cut(s)	1386, 1853, 2011
Bse118I	RCCGGY	1 cut(s)	2160
Bse1I	ACTGG	3 cut(s)	1051, 1575, 1593
Bse3DI	GCAATG	2 cut(s)	972, 1083
Bse8I	GATNNNNATC	1 cut(s)	1407
BseBI	CCWGG	2 cut(s)	882, 1011
BseDI	CCNNGG	6 cut(s)	402, 795, 1010, 1275, 1462, 1536
BseGI	GGATG	4 cut(s)	392, 784, 1042, 2104
BseJI	GATNNNNATC	1 cut(s)	1407
BseLI	CCNNNNNNNGG	3 cut(s)	1386, 1853, 2011
BseMI	GCAATG	2 cut(s)	972, 1083
BseMII	CTCAG	8 cut(s)	24, 383, 559, 726, 765, 1521, 1656, 2167
BseNI	ACTGG	3 cut(s)	1051, 1575, 1593
BseRI	GAGGAG	2 cut(s)	1466, 1600
BseSI	GKGCMC	1 cut(s)	1603
BseXI	GCAGC	4 cut(s)	81, 1247, 1907, 2130
BsgI	GTGCAG	1 cut(s)	1532
BshFI	GGCC	9 cut(s)	407, 611, 727, 889, 1535, 1779, 1832, 1933, 2160
BshNI	GGYRCC	1 cut(s)	1600
BsiHKAI	GWGCWC	1 cut(s)	1564
BsiHKCI	CYCGRG	1 cut(s)	1448
BsiSI	CCGG	6 cut(s)	129, 322, 388, 1061, 1180, 2161
BslFI	GGGAC	1 cut(s)	60
BslI	CCNNNNNNNGG	3 cut(s)	1386, 1853, 2011
BsmAI	GTCTC	2 cut(s)	2070, 2140
BsmFI	GGGAC	1 cut(s)	60
BsnI	GGCC	9 cut(s)	407, 611, 727, 889, 1535, 1779, 1832, 1933, 2160
BsoBI	CYCGRG	1 cut(s)	1448
Bsp119I	TTCGAA	3 cut(s)	578, 678, 2054
Bsp1286I	GDGCHC	6 cut(s)	109, 129, 491, 1564, 1577, 1603
Bsp1407I	TGTACA	2 cut(s)	683, 811
Bsp1720I	GCTNAGC	1 cut(s)	1803
Bsp19I	CCATGG	2 cut(s)	795, 1462
BspACI	CCGC	2 cut(s)	1236, 2170
BspANI	GGCC	9 cut(s)	407, 611, 727, 889, 1535, 1779, 1832, 1933, 2160
BspCNI	CTCAG	8 cut(s)	25, 382, 558, 725, 766, 1522, 1657, 2166
BspLI	GGNNCC	4 cut(s)	1602, 1662, 1934, 2168
BspMAI	CTGCAG	1 cut(s)	2064
BspMI	ACCTGC	2 cut(s)	256, 827
BspPI	GGATC	5 cut(s)	186, 279, 1001, 1472, 1838
BspQI	GCTCTTC	1 cut(s)	153
BspT104I	TTCGAA	3 cut(s)	578, 678, 2054
BspT107I	GGYRCC	1 cut(s)	1600
BsrBI	CCGCTC	1 cut(s)	2172
BsrDI	GCAATG	2 cut(s)	972, 1083
BsrFI	RCCGGY	1 cut(s)	2160
BsrGI	TGTACA	2 cut(s)	683, 811
BsrI	ACTGG	3 cut(s)	1051, 1575, 1593
BssAI	RCCGGY	1 cut(s)	2160
BssECI	CCNNGG	6 cut(s)	402, 795, 1010, 1275, 1462, 1536
BssNI	GRCGYC	1 cut(s)	985
BssT1I	CCWWGG	4 cut(s)	795, 1275, 1462, 1536
Bst2UI	CCWGG	2 cut(s)	882, 1011
Bst4CI	ACNGT	6 cut(s)	403, 416, 429, 694, 1553, 2134
Bst6I	CTCTTC	3 cut(s)	153, 772, 816
BstACI	GRCGYC	1 cut(s)	985
BstAPI	GCANNNNNTGC	1 cut(s)	1082
BstAUI	TGTACA	2 cut(s)	683, 811
BstBI	TTCGAA	3 cut(s)	578, 678, 2054
BstC8I	GCNNGC	3 cut(s)	346, 1118, 1642
BstDSI	CCRYGG	3 cut(s)	402, 795, 1462
BstF5I	GGATG	4 cut(s)	392, 784, 1042, 2104
BstMAI	GTCTC	2 cut(s)	2070, 2140
BstMWI	GCNNNNNNNGC	8 cut(s)	833, 982, 1082, 1598, 1785, 1925, 2166, 2178
BstNI	CCWGG	2 cut(s)	882, 1011
BstNSI	RCATGY	3 cut(s)	348, 1629, 1919
BstSCI	CCNGG	5 cut(s)	127, 321, 880, 1009, 1179
BstSFI	CTRYAG	2 cut(s)	801, 2060
BstSLI	GKGCMC	1 cut(s)	1603
BstV1I	GCAGC	4 cut(s)	81, 1247, 1907, 2130
BstV2I	GAAGAC	2 cut(s)	567, 768
BstX2I	RGATCY	4 cut(s)	271, 945, 1477, 1843
BstXI	CCANNNNNNTGG	1 cut(s)	403
BstYI	RGATCY	4 cut(s)	271, 945, 1477, 1843
BsuI	GTATCC	2 cut(s)	438, 1646
BsuRI	GGCC	9 cut(s)	407, 611, 727, 889, 1535, 1779, 1832, 1933, 2160
BtgI	CCRYGG	3 cut(s)	402, 795, 1462
BtgZI	GCGATG	1 cut(s)	512
BtrI	CACGTC	2 cut(s)	102, 1705
BtsCI	GGATG	4 cut(s)	392, 784, 1042, 2104
BtsI	GCAGTG	6 cut(s)	563, 604, 890, 1564, 1768, 2081
BveI	ACCTGC	2 cut(s)	256, 827
Cac8I	GCNNGC	3 cut(s)	346, 1118, 1642
Cfr10I	RCCGGY	1 cut(s)	2160
Cfr13I	GGNCC	4 cut(s)	726, 1777, 1831, 1932
CseI	GACGC	1 cut(s)	974
CsiI	ACCWGGT	1 cut(s)	880
Csp6I	GTAC	8 cut(s)	412, 584, 684, 812, 1150, 1669, 1724, 1861
CviQI	GTAC	8 cut(s)	412, 584, 684, 812, 1150, 1669, 1724, 1861
DraI	TTTAAA	1 cut(s)	1815
EaeI	YGGCCR	2 cut(s)	405, 887
Eam1104I	CTCTTC	3 cut(s)	153, 772, 816
EarI	CTCTTC	3 cut(s)	153, 772, 816
Eco130I	CCWWGG	4 cut(s)	795, 1275, 1462, 1536
Eco147I	AGGCCT	1 cut(s)	1535
Eco24I	GRGCYC	4 cut(s)	109, 129, 491, 1577
Eco32I	GATATC	1 cut(s)	2026
Eco57I	CTGAAG	4 cut(s)	891, 1172, 1329, 1793
Eco88I	CYCGRG	1 cut(s)	1448
EcoO109I	RGGNCCY	1 cut(s)	1932
EcoRII	CCWGG	2 cut(s)	880, 1009
EcoRV	GATATC	1 cut(s)	2026
EcoT14I	CCWWGG	4 cut(s)	795, 1275, 1462, 1536
EcoT22I	ATGCAT	3 cut(s)	346, 1489, 1714
EcoT38I	GRGCYC	4 cut(s)	109, 129, 491, 1577
ErhI	CCWWGG	4 cut(s)	795, 1275, 1462, 1536
FalI	AAGNNNNNCTT	2 cut(s)	1248, 1280
FaqI	GGGAC	1 cut(s)	60
FbaI	TGATCA	3 cut(s)	628, 855, 1099
Fnu4HI	GCNGC	5 cut(s)	95, 1261, 1896, 2119, 2170
FokI	GGATG	4 cut(s)	379, 791, 1049, 2111
FriOI	GRGCYC	4 cut(s)	109, 129, 491, 1577
Fsp4HI	GCNGC	5 cut(s)	95, 1261, 1896, 2119, 2170
FspBI	CTAG	7 cut(s)	110, 317, 744, 978, 1029, 1122, 1790
GluI	GCNGC	5 cut(s)	95, 1261, 1896, 2119, 2170
HaeIII	GGCC	9 cut(s)	407, 611, 727, 889, 1535, 1779, 1832, 1933, 2160
HapII	CCGG	6 cut(s)	129, 322, 388, 1061, 1180, 2161
HgaI	GACGC	1 cut(s)	974
Hin1I	GRCGYC	1 cut(s)	985
HindIII	AAGCTT	4 cut(s)	216, 278, 1955, 2179
HpaII	CCGG	6 cut(s)	129, 322, 388, 1061, 1180, 2161
HphI	GGTGA	6 cut(s)	143, 740, 794, 1086, 1979, 2060
Hpy166II	GTNNAC	3 cut(s)	722, 1690, 2048
Hpy188III	TCNNGA	6 cut(s)	182, 1268, 1334, 1437, 1664, 1743
Hpy8I	GTNNAC	3 cut(s)	722, 1690, 2048
Hpy99I	CGWCG	2 cut(s)	199, 903
HpyAV	CCTTC	9 cut(s)	239, 587, 930, 1035, 1274, 1315, 1391, 1768, 1819
HpyCH4III	ACNGT	6 cut(s)	403, 416, 429, 694, 1553, 2134
HpyCH4IV	ACGT	5 cut(s)	49, 101, 153, 1704, 2050
HpyF10VI	GCNNNNNNNGC	8 cut(s)	833, 982, 1082, 1598, 1785, 1925, 2166, 2178
HpySE526I	ACGT	5 cut(s)	49, 101, 153, 1704, 2050
Hsp92I	GRCGYC	1 cut(s)	985
Ksp22I	TGATCA	3 cut(s)	628, 855, 1099
LguI	GCTCTTC	1 cut(s)	153
LmnI	GCTCC	3 cut(s)	652, 1666, 2166
Lsp1109I	GCAGC	4 cut(s)	81, 1247, 1907, 2130
LweI	GCATC	3 cut(s)	535, 1261, 1960
MabI	ACCWGGT	1 cut(s)	880
MaeI	CTAG	7 cut(s)	110, 317, 744, 978, 1029, 1122, 1790
MaeII	ACGT	5 cut(s)	49, 101, 153, 1704, 2050
MaeIII	GTNAC	6 cut(s)	131, 503, 599, 746, 909, 1763
MbiI	CCGCTC	1 cut(s)	2172
MfeI	CAATTG	3 cut(s)	637, 971, 1053
MflI	RGATCY	4 cut(s)	271, 945, 1477, 1843
MhlI	GDGCHC	6 cut(s)	109, 129, 491, 1564, 1577, 1603
MlsI	TGGCCA	2 cut(s)	407, 889
MluNI	TGGCCA	2 cut(s)	407, 889
MlyI	GAGTC	6 cut(s)	71, 128, 218, 500, 758, 2096
MmeI	TCCRAC	1 cut(s)	1475
Mox20I	TGGCCA	2 cut(s)	407, 889
Mph1103I	ATGCAT	3 cut(s)	346, 1489, 1714
MscI	TGGCCA	2 cut(s)	407, 889
MseI	TTAA	9 cut(s)	282, 339, 477, 1290, 1298, 1358, 1814, 1983, 2073
MslI	CAYNNNNRTG	2 cut(s)	401, 2034
Msp20I	TGGCCA	2 cut(s)	407, 889
MspI	CCGG	6 cut(s)	129, 322, 388, 1061, 1180, 2161
MspR9I	CCNGG	5 cut(s)	129, 323, 882, 1011, 1181
MunI	CAATTG	3 cut(s)	637, 971, 1053
MvaI	CCWGG	2 cut(s)	882, 1011
MwoI	GCNNNNNNNGC	8 cut(s)	833, 982, 1082, 1598, 1785, 1925, 2166, 2178
NciI	CCSGG	3 cut(s)	129, 323, 1181
NcoI	CCATGG	2 cut(s)	795, 1462
NlaIV	GGNNCC	4 cut(s)	1602, 1662, 1934, 2168
NmuCI	GTSAC	5 cut(s)	131, 503, 599, 746, 1763
NsiI	ATGCAT	3 cut(s)	346, 1489, 1714
NspI	RCATGY	3 cut(s)	348, 1629, 1919
NspV	TTCGAA	3 cut(s)	578, 678, 2054
OliI	CACNNNNGTG	1 cut(s)	401
PaeI	GCATGC	1 cut(s)	348
PaeR7I	CTCGAG	1 cut(s)	1448
PaqCI	CACCTGC	1 cut(s)	256
PceI	AGGCCT	1 cut(s)	1535
PciSI	GCTCTTC	1 cut(s)	153
PfeI	GAWTC	4 cut(s)	313, 1456, 2018, 2056
PfoI	TCCNGGA	1 cut(s)	321
PkrI	GCNGC	5 cut(s)	96, 1262, 1897, 2120, 2171
PleI	GAGTC	6 cut(s)	71, 128, 218, 500, 758, 2096
PpsI	GAGTC	6 cut(s)	71, 128, 218, 500, 758, 2096
PsiI	TTATAA	1 cut(s)	1254
Psp6I	CCWGG	2 cut(s)	880, 1009
PspGI	CCWGG	2 cut(s)	880, 1009
PspN4I	GGNNCC	4 cut(s)	1602, 1662, 1934, 2168
PspPI	GGNCC	4 cut(s)	726, 1777, 1831, 1932
PspXI	VCTCGAGB	1 cut(s)	1448
PsrI	GAACNNNNNNTAC	2 cut(s)	532, 564
PstI	CTGCAG	1 cut(s)	2064
PsuI	RGATCY	4 cut(s)	271, 945, 1477, 1843
RsaI	GTAC	8 cut(s)	413, 585, 685, 813, 1151, 1670, 1725, 1862
RsaNI	GTAC	8 cut(s)	412, 584, 684, 812, 1150, 1669, 1724, 1861
RseI	CAYNNNNRTG	2 cut(s)	401, 2034
SapI	GCTCTTC	1 cut(s)	153
SaqAI	TTAA	9 cut(s)	282, 339, 477, 1290, 1298, 1358, 1814, 1983, 2073
SatI	GCNGC	5 cut(s)	95, 1261, 1896, 2119, 2170
Sau96I	GGNCC	4 cut(s)	726, 1777, 1831, 1932
ScaI	AGTACT	4 cut(s)	413, 585, 1151, 1670
SchI	GAGTC	6 cut(s)	71, 128, 218, 500, 758, 2096
ScrFI	CCNGG	5 cut(s)	129, 323, 882, 1011, 1181
SduI	GDGCHC	6 cut(s)	109, 129, 491, 1564, 1577, 1603
SexAI	ACCWGGT	1 cut(s)	880
SfaNI	GCATC	3 cut(s)	535, 1261, 1960
SfcI	CTRYAG	2 cut(s)	801, 2060
Sfr274I	CTCGAG	1 cut(s)	1448
SfuI	TTCGAA	3 cut(s)	578, 678, 2054
SlaI	CTCGAG	1 cut(s)	1448
SmiMI	CAYNNNNRTG	2 cut(s)	401, 2034
SmlI	CTYRAG	3 cut(s)	275, 510, 1448
SmoI	CTYRAG	3 cut(s)	275, 510, 1448
SphI	GCATGC	1 cut(s)	348
SseBI	AGGCCT	1 cut(s)	1535
SsiI	CCGC	2 cut(s)	1236, 2170
SspMI	CTAG	7 cut(s)	110, 317, 744, 978, 1029, 1122, 1790
StuI	AGGCCT	1 cut(s)	1535
StyD4I	CCNGG	5 cut(s)	127, 321, 880, 1009, 1179
StyI	CCWWGG	4 cut(s)	795, 1275, 1462, 1536
TaaI	ACNGT	6 cut(s)	403, 416, 429, 694, 1553, 2134
TaiI	ACGT	5 cut(s)	52, 104, 156, 1707, 2053
TaqI	TCGA	5 cut(s)	181, 578, 678, 1449, 2054
TatI	WGTACW	7 cut(s)	411, 583, 683, 811, 1149, 1668, 1723
TauI	GCSGC	1 cut(s)	2172
TfiI	GAWTC	4 cut(s)	313, 1456, 2018, 2056
Tru1I	TTAA	9 cut(s)	282, 339, 477, 1290, 1298, 1358, 1814, 1983, 2073
Tru9I	TTAA	9 cut(s)	282, 339, 477, 1290, 1298, 1358, 1814, 1983, 2073
TseFI	GTSAC	5 cut(s)	131, 503, 599, 746, 1763
TseI	GCWGC	4 cut(s)	94, 1260, 1895, 2118
Tsp45I	GTSAC	5 cut(s)	131, 503, 599, 746, 1763
TspDTI	ATGAA	5 cut(s)	183, 258, 540, 606, 774
XapI	RAATTY	2 cut(s)	285, 350
XceI	RCATGY	3 cut(s)	348, 1629, 1919
XhoI	CTCGAG	1 cut(s)	1448
XspI	CTAG	7 cut(s)	110, 317, 744, 978, 1029, 1122, 1790
ZrmI	AGTACT	4 cut(s)	413, 585, 1151, 1670
Zsp2I	ATGCAT	3 cut(s)	346, 1489, 1714

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.