pycom15g17050

Plant protein of unknown function (DUF936)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
11972309 .. 11977873
5565 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3201 bp
ATGCAAGGGAAATCCGGCCAATCGTCGTTCCGAGATCGAACGCAGGAGTTTCAGAGCGTCACGGATAGGCTTCGTAAGTCGTTCGCGCCATCTTTCAATGGGCCGTCGAGCAGCGGCAGCAGTGGCGGGAAGCTCGACGGACCTCGATCTGCGGCGTCGGTTCAATCGGAGTTCAACAAAAGGGCTTCCAAGATTGGGCTCGGGATTCACCACACTTCCCAGAAGCTTGGAAAGCTCACACAATTGGCGAAAAGGACATCGGTGTTTGATGATCCGGCTCTGGAGATCCAAGAGCTGACAGCAGCTATAAAACAAGACATTACTGGACTTAATTCAGCACTGATAGATCTGCAGCTGCACTGCAATTCCCAGAACGAAAGTGCGAACATCTCGAGTGACACCACGACTCATTCAACCACCGTTGTAGATAACCTGAAGAACCGGTTGATGAGTGCTACGAAGGAGTTTAAGGAAGTTCTGACCATGCGGACAGAGAATTTAAAGGTTCATGAAAATAGGAGGCAGTTATTTTCTTCAACCACTTCGAAAGAGTCAACAAATCCATTTGTTCGTCAACGTCCTGTGGCTGCCAGATCAGCTGCTAATGCATCGACAGCTCCTCCTCCATGGGCCAATGATTCTGCATCTTCGTCACAGTTATTTCCTAGGAAGCAGACAGATAAGGAATCTCGACCATTATTGCAGCAGCAGCAGGTAGTAGAACAACAAGACACCTATATGCATAGCCGTTCTGAGGCTCTTCAGAACGTGGAGTCAACTATTCACGAGCTGGGTAACATATTTACCCAATTGGCAACCATGGTTTCGCAGCAAGGAGAGCTTGCAATCAGGATTGACGAGAGCATGGACGAGACGTTGTCCAACGTGGAAGGAGCGCAAGGGCAACTGGCCAGGTACCTTAACAGTATATCATCCAACCGATGGCTAATGATGAAGATATTCTTTGTACTTATTCTATTTCTTATATTTTTCGTATTTTTTGCGAGAGTACTACGTCTCCACAGATTCAACCCTCCACCTTCTCTCTCCGTCTCTCTTAGACGCACAACAATGGCGTCGCTCACTCCAGGAATCCTCCTGAAGCTCCTCCAGTCAATGAACTCCGCCACCAAAGTCACCGGCGACCACCGCTCTGCCCTCCTCCAAGTCATTGGCATAGTCCCCGCCCTCGCCGGCTCCGACCTCTCGTCCAACCAGGGCTTCTACGTCCAGCTCTCCGACTCCCTCAACTCCACCTACGTCTCCCTCTCCAATCGCGACACCGACCTCATCCTCACAAACCGCCTCCAGCTCGGCCAGTTTGCCTACGTCGACCGCTTCAATTTTGACTCCCCCGTCCCACTCGTCCTCGGTATCCGCCCCATCGCAGGCCGCCACCCCTTTCTTGGTACCCCAGAGCCCCTTGTGGCCAGAGTGTCTACCTCAAAGCGCGAGTTCGTGATCCAGCCTGTGTCGGATTCCGACCAGTCCGCGGATTTCATGGCGATTTACCTGTCCAATAAGCAGCAGGAGCAGGTTGTGAGGAATGACAAGAAAGAAGCCAAGATTGAGAAGGCACGACCATCAAGGCAGCCTCTTGCTCCTCGAGACAATGTCAATACGGGAGAGAATTTGAATTCAAATTCAATTTCGGATGAGGCTAAGAAGATCTCAGATCGGCCGGCTTCCAGGTTTTCGTCTCCGGCAGGTGCAAAGAGGTCTGTTTCTGTCGGGAAGAAGAACCCTGCATTGGCCGAGAGAGATCCATCGCTGGCAGGAAAAGGAAAGAGATCGGGATCTCCAGCCCCCTCGAAATGCGTGGTTCCAAGCTTAATGGTGGCGAAGGAAGAAGATCGGAAGGCGTCAAAAGAGGCGGCGATTATAGTGCCGTCAAGGTACCGACAGCCGTCCCCGGTTGGGCAGCGGAGGCAGCCTTCGCCAAATGCCCGGAGGGCTTCGCTTTCTCCCGGGAGGCGGTTGTCCGGAGGAGTGAAGGACTCTGCTGCCAAGAAGAAGATGGCAGGTATAGTTGCAGGGATTTCGAAGGTTTCGGAAGCCCTCATTGGGTCTGGAAAGGGTAATCGAAAGGGCTGGGATGAGTCGCCGGCGGTGGAGCAGAAAGAGAAGCCTGCGGCGAAGAACAAACCAGATTTGCAGTCATTTATAAGGACTCAGGCTGCCCTTGCGCGACGATTAAGCGATGCAAAAGGTGGAAGTCCGAACGGCGGTGATGATTCTTCCAGCAATGAGAAAACGAAATCAGGATCACTGAAAGATTTGGTGGTCCAAGAGAAACCCAGCTGTGCAGCAGCACCGGGCATCACTGTTCATGAAAAAAAATGGATTGATGGAAGTGTCTCACTTGATGCAGTCTCTTCAGACCTTGCAAGGCTTGGAAAGGAAGCTTTGCAGAGGAAAGTTCTAGCTTCTGCAGCCGCAGCTGAAGCTCTGGAGGAGGCCATTGCTACTGAGTCTCTAGTGAGGAAATTAAGCATGTTTGCAGAACTCGCTTCTACATCCAAGGTTGGGAGCCCTCTACCTGCCATTGACCGCTTCTTTTCGATCTATGATGAAGTTGTTAAATCAACCACACTTACTGAATCAATTGCTAGTAACCGCAATTCAGATACATCTTACAATGATCAAATTCCCACTGAGCAATCGAAACCTGTTTCACTTTGGGTCGAAGCTGCCTTAGCTACTGATCTCAGCATCGTCTCTCTCCTTACCGCCCAAGACAACGAAACTCCGTCGGCTTTGCAGAAAAGTCTGTCAAAACGACAATACACACCTGCCAAATCCCATCTCAAGATTTCCCCTTCTTCACCGCAGTCCACTGCAGGCGTTGGAACATGGACAAAGGGTCATGGAATGAAGGAGACAGTCGAGCTGGCGGTAAGTCTGCAATCCGAGATGCAAATGTGGTTTCTGCAGTTTGTCGAGAAGGCTCTGGATGCCGGTTTCCGAGTGTTTGGAGAGTGCGCTGCAAATGGCGGTAAATTGCCTATCGACTGTGGCTCCATTGCAGCTGTTCTATCGCAGTTGAAGCGAGTGAATGAGTGGCTGGATGGAGTCGTCTCGAAAAGGAATGAGCTGAATGAGAAGGTTGATGGGCTGAAGAGGAAGATCTACGGCTTTGTTATTCAACATGTTGGGACGACGTTCGACAACCCCACTCCTCTTGCTCCTTCTTCCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1067

Amino Acids

115.7

Weight (kDa)

9.64

Isoelectric Point (pI)

53.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNARE PF05739 281 - 332 2.3e-15 SNARE domain
DUF936 PF06075 361 - 477 6e-50 Plant protein of unknown function (DUF936)
DUF6857 PF21647 775 - 1057 1.1e-94 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011282)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2165
AarI CACCTGC 2 cut(s) 1697, 2800
AasI GACNNNNNNGTC 1 cut(s) 1355
Acc36I ACCTGC 6 cut(s) 703, 1525, 1697, 2012, 2548, 2800
Acc65I GGTACC 3 cut(s) 915, 1409, 1896
AccB1I GGYRCC 3 cut(s) 915, 1409, 1896
AccB7I CCANNNNNTGG 1 cut(s) 942
AccBSI CCGCTC 1 cut(s) 1152
AccI GTMKAC 2 cut(s) 1332, 1439
AccII CGCG 5 cut(s) 86, 1278, 1452, 1493, 2188
AccIII TCCGGA 1 cut(s) 1982
AclWI GGATC 6 cut(s) 266, 280, 1456, 1757, 1804, 2272
AcoI YGGCCR 6 cut(s) 16, 909, 1315, 1428, 1679, 1752
AcsI RAATTY 5 cut(s) 496, 1630, 1636, 1642, 2646
AcuI CTGAAG 6 cut(s) 455, 746, 1121, 2361, 2463, 3137
AcyI GRCGYC 3 cut(s) 155, 1076, 1862
AfaI GTAC 5 cut(s) 917, 969, 1011, 1411, 1898
AflIII ACRYGT 1 cut(s) 3148
AgeI ACCGGT 1 cut(s) 441
AhdI GACNNNNNGTC 2 cut(s) 1207, 2862
AjnI CCWGG 4 cut(s) 911, 1087, 1215, 1688
AjuI GAANNNNNNNTTGG 6 cut(s) 1205, 1237, 1733, 1765, 2046, 2078
AlwI GGATC 6 cut(s) 266, 280, 1456, 1757, 1804, 2272
Ama87I CYCGRG 4 cut(s) 200, 391, 1605, 1967
Aor13HI TCCGGA 1 cut(s) 1982
ApoI RAATTY 5 cut(s) 496, 1630, 1636, 1642, 2646
AsiGI ACCGGT 1 cut(s) 441
Asp700I GAANNNNTTC 1 cut(s) 959
Asp718I GGTACC 3 cut(s) 915, 1409, 1896
AspA2I CCTAGG 1 cut(s) 665
AspLEI GCGC 5 cut(s) 88, 898, 1452, 2188, 2984
AspS9I GGNCC 4 cut(s) 101, 140, 630, 2284
AsuC2I CCSGG 5 cut(s) 1913, 1948, 1968, 1969, 2316
AsuHPI GGTGA 4 cut(s) 200, 1129, 2240, 2817
AsuII TTCGAA 2 cut(s) 545, 2042
AvaI CYCGRG 4 cut(s) 200, 391, 1605, 1967
AvaII GGWCC 2 cut(s) 140, 2284
AvrII CCTAGG 1 cut(s) 665
BalI TGGCCA 2 cut(s) 911, 1430
BanI GGYRCC 3 cut(s) 915, 1409, 1896
BanII GRGCYC 3 cut(s) 201, 1422, 2534
BauI CACGAG 1 cut(s) 785
BceAI ACGGC 6 cut(s) 88, 732, 1873, 1891, 2239, 3148
BcgI CGANNNNNNTGC 4 cut(s) 1867, 1901, 2022, 2056
BciT130I CCWGG 4 cut(s) 913, 1089, 1217, 1690
BciVI GTATCC 1 cut(s) 1385
BclI TGATCA 1 cut(s) 2641
BcnI CCSGG 5 cut(s) 1913, 1948, 1968, 1969, 2316
BfaI CTAG 4 cut(s) 666, 2423, 2477, 2610
BfmI CTRYAG 4 cut(s) 350, 2430, 2838, 2930
BfuAI ACCTGC 6 cut(s) 703, 1525, 1697, 2012, 2548, 2800
BfuI GTATCC 1 cut(s) 1385
BglI GCCNNNNNGGC 1 cut(s) 1952
BglII AGATCT 3 cut(s) 346, 1668, 3126
BlnI CCTAGG 1 cut(s) 665
BmcAI AGTACT 1 cut(s) 1011
Bme1390I CCNGG 9 cut(s) 913, 1089, 1217, 1690, 1913, 1948, 1968, 1969, 2316
Bme18I GGWCC 2 cut(s) 140, 2284
BmeRI GACNNNNNGTC 2 cut(s) 1207, 2862
BmeT110I CYCGRG 4 cut(s) 200, 391, 1605, 1967
BmgT120I GGNCC 4 cut(s) 101, 140, 630, 2284
BmiI GGNNCC 7 cut(s) 917, 1198, 1411, 1824, 1898, 2531, 3019
BmrFI CCNGG 9 cut(s) 913, 1089, 1217, 1690, 1913, 1948, 1968, 1969, 2316
BmsI GCATC 8 cut(s) 617, 653, 2191, 2328, 2356, 2721, 2904, 2944
BoxI GACNNNNGTC 1 cut(s) 1906
BpmI CTGGAG 6 cut(s) 302, 1071, 1094, 1292, 1785, 2471
Bpu10I CCTNAGC 1 cut(s) 2695
Bpu14I TTCGAA 2 cut(s) 545, 2042
BpuEI CTTGAG 1 cut(s) 2792
BpuMI CCSGG 5 cut(s) 1913, 1948, 1968, 1969, 2316
BsaBI GATNNNNATC 1 cut(s) 1795
BsaHI GRCGYC 3 cut(s) 155, 1076, 1862
BsaJI CCNNGG 9 cut(s) 626, 665, 819, 1216, 1369, 1491, 1911, 1967, 2520
BsaWI WCCGGW 2 cut(s) 441, 1982
BsaXI ACNNNNNCTCC 6 cut(s) 604, 634, 1002, 1032, 3002, 3032
Bse118I RCCGGY 6 cut(s) 441, 1139, 1193, 1681, 2104, 2957
Bse1I ACTGG 5 cut(s) 328, 912, 1111, 1318, 1486
Bse3DI GCAATG 3 cut(s) 2251, 2460, 3021
Bse8I GATNNNNATC 1 cut(s) 1795
BseAI TCCGGA 1 cut(s) 1982
BseBI CCWGG 4 cut(s) 913, 1089, 1217, 1690
BseDI CCNNGG 9 cut(s) 626, 665, 819, 1216, 1369, 1491, 1911, 1967, 2520
BseGI GGATG 7 cut(s) 932, 1290, 1660, 2101, 2516, 2959, 3073
BseJI GATNNNNATC 1 cut(s) 1795
BseMI GCAATG 3 cut(s) 2251, 2460, 3021
BseMII CTCAG 6 cut(s) 744, 1686, 2186, 2460, 2646, 2722
BseNI ACTGG 5 cut(s) 328, 912, 1111, 1318, 1486
BseRI GAGGAG 8 cut(s) 609, 612, 1097, 1151, 1593, 2001, 2468, 3168
BseX3I CGGCCG 1 cut(s) 1679
BseYI CCCAGC 3 cut(s) 790, 2091, 2297
BsgI GTGCAG 2 cut(s) 341, 2325
Bsh1236I CGCG 5 cut(s) 86, 1278, 1452, 1493, 2188
Bsh1285I CGRYCG 2 cut(s) 1336, 1682
BshNI GGYRCC 3 cut(s) 915, 1409, 1896
BshTI ACCGGT 1 cut(s) 441
BsiEI CGRYCG 2 cut(s) 1336, 1682
BsiHKCI CYCGRG 4 cut(s) 200, 391, 1605, 1967
BslFI GGGAC 4 cut(s) 1166, 1343, 1894, 3169
BsmBI CGTCTC 7 cut(s) 866, 1022, 1057, 1267, 1704, 2722, 3082
BsmFI GGGAC 4 cut(s) 1166, 1343, 1894, 3169
BsoBI CYCGRG 4 cut(s) 200, 391, 1605, 1967
Bsp119I TTCGAA 2 cut(s) 545, 2042
Bsp1286I GDGCHC 3 cut(s) 201, 1422, 2534
Bsp13I TCCGGA 1 cut(s) 1982
Bsp19I CCATGG 2 cut(s) 626, 819
Bsp68I TCGCGA 1 cut(s) 1278
BspCNI CTCAG 6 cut(s) 745, 1685, 2185, 2461, 2647, 2721
BspEI TCCGGA 1 cut(s) 1982
BspFNI CGCG 5 cut(s) 86, 1278, 1452, 1493, 2188
BspHI TCATGA 2 cut(s) 508, 2329
BspLI GGNNCC 7 cut(s) 917, 1198, 1411, 1824, 1898, 2531, 3019
BspMAI CTGCAG 4 cut(s) 354, 2434, 2842, 2934
BspMI ACCTGC 6 cut(s) 703, 1525, 1697, 2012, 2548, 2800
BspPI GGATC 6 cut(s) 266, 280, 1456, 1757, 1804, 2272
BspQI GCTCTTC 1 cut(s) 765
BspT104I TTCGAA 2 cut(s) 545, 2042
BspT107I GGYRCC 3 cut(s) 915, 1409, 1896
BsrBI CCGCTC 1 cut(s) 1152
BsrDI GCAATG 3 cut(s) 2251, 2460, 3021
BsrFI RCCGGY 6 cut(s) 441, 1139, 1193, 1681, 2104, 2957
BsrI ACTGG 5 cut(s) 328, 912, 1111, 1318, 1486
BssAI RCCGGY 6 cut(s) 441, 1139, 1193, 1681, 2104, 2957
BssECI CCNNGG 9 cut(s) 626, 665, 819, 1216, 1369, 1491, 1911, 1967, 2520
BssNI GRCGYC 3 cut(s) 155, 1076, 1862
BssSI CACGAG 1 cut(s) 785
BssT1I CCWWGG 4 cut(s) 626, 665, 819, 2520
Bst2BI CACGAG 1 cut(s) 785
Bst2UI CCWGG 4 cut(s) 913, 1089, 1217, 1690
Bst4CI ACNGT 6 cut(s) 421, 657, 926, 2326, 2884, 3014
Bst6I CTCTTC 3 cut(s) 765, 2380, 3113
BstACI GRCGYC 3 cut(s) 155, 1076, 1862
BstBI TTCGAA 2 cut(s) 545, 2042
BstC8I GCNNGC 9 cut(s) 843, 1195, 1390, 1683, 1773, 2106, 2130, 2842, 2892
BstDEI CTNAG 9 cut(s) 753, 1058, 1662, 1672, 2172, 2469, 2655, 2695, 2708
BstDSI CCRYGG 3 cut(s) 626, 819, 1491
BstF5I GGATG 7 cut(s) 932, 1290, 1660, 2101, 2516, 2959, 3073
BstFNI CGCG 5 cut(s) 86, 1278, 1452, 1493, 2188
BstHHI GCGC 5 cut(s) 88, 898, 1452, 2188, 2984
BstMCI CGRYCG 2 cut(s) 1336, 1682
BstNI CCWGG 4 cut(s) 913, 1089, 1217, 1690
BstNSI RCATGY 2 cut(s) 2497, 3152
BstPAI GACNNNNGTC 1 cut(s) 1906
BstSCI CCNGG 9 cut(s) 911, 1087, 1215, 1688, 1911, 1946, 1966, 1967, 2314
BstSFI CTRYAG 4 cut(s) 350, 2430, 2838, 2930
BstUI CGCG 5 cut(s) 86, 1278, 1452, 1493, 2188
BstX2I RGATCY 6 cut(s) 285, 346, 1668, 1762, 1796, 3126
BstXI CCANNNNNNTGG 2 cut(s) 227, 1172
BstYI RGATCY 6 cut(s) 285, 346, 1668, 1762, 1796, 3126
BstZI CGGCCG 1 cut(s) 1679
BsuI GTATCC 1 cut(s) 1385
BtgI CCRYGG 3 cut(s) 626, 819, 1491
BtgZI GCGATG 3 cut(s) 1369, 1752, 2214
BtsCI GGATG 7 cut(s) 932, 1290, 1660, 2101, 2516, 2959, 3073
BtsI GCAGTG 3 cut(s) 127, 358, 2835
BtsIMutI CAGTG 7 cut(s) 127, 338, 358, 2267, 2322, 2652, 2835
BtuMI TCGCGA 1 cut(s) 1278
BveI ACCTGC 6 cut(s) 703, 1525, 1697, 2012, 2548, 2800
Cac8I GCNNGC 9 cut(s) 843, 1195, 1390, 1683, 1773, 2106, 2130, 2842, 2892
CciI TCATGA 2 cut(s) 508, 2329
CfoI GCGC 5 cut(s) 88, 898, 1452, 2188, 2984
Cfr10I RCCGGY 6 cut(s) 441, 1139, 1193, 1681, 2104, 2957
Cfr13I GGNCC 4 cut(s) 101, 140, 630, 2284
Cfr42I CCGCGG 1 cut(s) 1494
Cfr9I CCCGGG 1 cut(s) 1967
CseI GACGC 5 cut(s) 46, 144, 1065, 1071, 1851
Csp6I GTAC 5 cut(s) 916, 968, 1010, 1410, 1897
CspAI ACCGGT 1 cut(s) 441
CspCI CAANNNNNGTGG 2 cut(s) 3163, 3198
CviQI GTAC 5 cut(s) 916, 968, 1010, 1410, 1897
DdeI CTNAG 9 cut(s) 753, 1058, 1662, 1672, 2172, 2469, 2655, 2695, 2708
DraI TTTAAA 1 cut(s) 501
DrdI GACNNNNNNGTC 1 cut(s) 1355
DriI GACNNNNNGTC 2 cut(s) 1207, 2862
DseDI GACNNNNNNGTC 1 cut(s) 1355
EaeI YGGCCR 6 cut(s) 16, 909, 1315, 1428, 1679, 1752
EagI CGGCCG 1 cut(s) 1679
Eam1104I CTCTTC 3 cut(s) 765, 2380, 3113
Eam1105I GACNNNNNGTC 2 cut(s) 1207, 2862
EarI CTCTTC 3 cut(s) 765, 2380, 3113
EciI GGCGGA 2 cut(s) 1114, 1367
EclXI CGGCCG 1 cut(s) 1679
Eco130I CCWWGG 4 cut(s) 626, 665, 819, 2520
Eco24I GRGCYC 3 cut(s) 201, 1422, 2534
Eco47I GGWCC 2 cut(s) 140, 2284
Eco52I CGGCCG 1 cut(s) 1679
Eco57I CTGAAG 6 cut(s) 455, 746, 1121, 2361, 2463, 3137
Eco88I CYCGRG 4 cut(s) 200, 391, 1605, 1967
EcoRI GAATTC 1 cut(s) 1636
EcoRII CCWGG 4 cut(s) 911, 1087, 1215, 1688
EcoT14I CCWWGG 4 cut(s) 626, 665, 819, 2520
EcoT22I ATGCAT 2 cut(s) 610, 744
EcoT38I GRGCYC 3 cut(s) 201, 1422, 2534
ErhI CCWWGG 4 cut(s) 626, 665, 819, 2520
Esp3I CGTCTC 7 cut(s) 866, 1022, 1057, 1267, 1704, 2722, 3082
FalI AAGNNNNNCTT 4 cut(s) 825, 857, 947, 979
FaqI GGGAC 4 cut(s) 1166, 1343, 1894, 3169
FauI CCCGC 2 cut(s) 119, 1192
FbaI TGATCA 1 cut(s) 2641
FblI GTMKAC 2 cut(s) 1332, 1439
FokI GGATG 7 cut(s) 919, 1277, 1667, 2108, 2503, 2966, 3080
FriOI GRGCYC 3 cut(s) 201, 1422, 2534
FspBI CTAG 4 cut(s) 666, 2423, 2477, 2610
GlaI GCGC 5 cut(s) 87, 897, 1451, 2187, 2983
GsaI CCCAGC 3 cut(s) 794, 2095, 2301
GsuI CTGGAG 6 cut(s) 302, 1071, 1094, 1292, 1785, 2471
HgaI GACGC 5 cut(s) 46, 144, 1065, 1071, 1851
HhaI GCGC 5 cut(s) 88, 898, 1452, 2188, 2984
Hin1I GRCGYC 3 cut(s) 155, 1076, 1862
Hin6I GCGC 5 cut(s) 86, 896, 1450, 2186, 2982
HinP1I GCGC 5 cut(s) 86, 896, 1450, 2186, 2982
HincII GTYRAC 4 cut(s) 555, 575, 777, 1333
HindII GTYRAC 4 cut(s) 555, 575, 777, 1333
HindIII AAGCTT 3 cut(s) 224, 1828, 2403
HphI GGTGA 4 cut(s) 200, 1129, 2240, 2817
Hpy166II GTNNAC 6 cut(s) 555, 575, 777, 1333, 1440, 2835
Hpy8I GTNNAC 6 cut(s) 555, 575, 777, 1333, 1440, 2835
Hpy99I CGWCG 9 cut(s) 28, 109, 140, 160, 1081, 1334, 2193, 2755, 3163
HpyCH4III ACNGT 6 cut(s) 421, 657, 926, 2326, 2884, 3014
HpyCH4IV ACGT 9 cut(s) 577, 768, 875, 885, 1015, 1227, 1260, 1329, 3161
HpyF3I CTNAG 9 cut(s) 753, 1058, 1662, 1672, 2172, 2469, 2655, 2695, 2708
HpySE526I ACGT 9 cut(s) 577, 768, 875, 885, 1015, 1227, 1260, 1329, 3161
Hsp92I GRCGYC 3 cut(s) 155, 1076, 1862
HspAI GCGC 5 cut(s) 86, 896, 1450, 2186, 2982
Kpn2I TCCGGA 1 cut(s) 1982
KpnI GGTACC 3 cut(s) 919, 1413, 1900
KroI GCCGGC 3 cut(s) 1193, 1681, 2104
KroNI GCCGGC 3 cut(s) 1195, 1683, 2106
Ksp22I TGATCA 1 cut(s) 2641
KspI CCGCGG 1 cut(s) 1494
LguI GCTCTTC 1 cut(s) 765
LweI GCATC 8 cut(s) 617, 653, 2191, 2328, 2356, 2721, 2904, 2944
MaeI CTAG 4 cut(s) 666, 2423, 2477, 2610
MaeII ACGT 9 cut(s) 577, 768, 875, 885, 1015, 1227, 1260, 1329, 3161
MaeIII GTNAC 6 cut(s) 58, 395, 651, 794, 1135, 2612
MbiI CCGCTC 1 cut(s) 1152
MfeI CAATTG 3 cut(s) 242, 809, 2604
MflI RGATCY 6 cut(s) 285, 346, 1668, 1762, 1796, 3126
MhlI GDGCHC 3 cut(s) 201, 1422, 2534
MlsI TGGCCA 2 cut(s) 911, 1430
MluNI TGGCCA 2 cut(s) 911, 1430
MmeI TCCRAC 8 cut(s) 906, 960, 1224, 1236, 1263, 1455, 1506, 2827
Mox20I TGGCCA 2 cut(s) 911, 1430
Mph1103I ATGCAT 2 cut(s) 610, 744
MreI CGCCGGCG 1 cut(s) 2104
MroI TCCGGA 1 cut(s) 1982
MroNI GCCGGC 3 cut(s) 1193, 1681, 2104
MroXI GAANNNNTTC 1 cut(s) 959
MscI TGGCCA 2 cut(s) 911, 1430
MseI TTAA 8 cut(s) 330, 468, 500, 921, 1832, 2195, 2489, 2580
MslI CAYNNNNRTG 2 cut(s) 737, 1070
Msp20I TGGCCA 2 cut(s) 911, 1430
MspA1I CMGCKG 8 cut(s) 114, 355, 599, 1493, 1924, 2301, 2441, 3029
MspR9I CCNGG 9 cut(s) 913, 1089, 1217, 1690, 1913, 1948, 1968, 1969, 2316
MunI CAATTG 3 cut(s) 242, 809, 2604
MvaI CCWGG 4 cut(s) 913, 1089, 1217, 1690
MvnI CGCG 5 cut(s) 86, 1278, 1452, 1493, 2188
NaeI GCCGGC 3 cut(s) 1195, 1683, 2106
NciI CCSGG 5 cut(s) 1913, 1948, 1968, 1969, 2316
NcoI CCATGG 2 cut(s) 626, 819
NgoMIV GCCGGC 3 cut(s) 1193, 1681, 2104
NlaIV GGNNCC 7 cut(s) 917, 1198, 1411, 1824, 1898, 2531, 3019
NmeAIII GCCGAG 2 cut(s) 1293, 1780
NmuCI GTSAC 4 cut(s) 58, 395, 651, 1135
NruI TCGCGA 1 cut(s) 1278
NsiI ATGCAT 2 cut(s) 610, 744
NspI RCATGY 2 cut(s) 2497, 3152
NspV TTCGAA 2 cut(s) 545, 2042
PaeR7I CTCGAG 2 cut(s) 391, 1605
PagI TCATGA 2 cut(s) 508, 2329
PaqCI CACCTGC 2 cut(s) 1697, 2800
PciI ACATGT 1 cut(s) 3148
PciSI GCTCTTC 1 cut(s) 765
PcsI WCGNNNNNNNCGW 1 cut(s) 1197
PdiI GCCGGC 3 cut(s) 1195, 1683, 2106
PdmI GAANNNNTTC 1 cut(s) 959
PfeI GAWTC 8 cut(s) 205, 638, 686, 1026, 1092, 1478, 2234, 2600
PflFI GACNNNGTC 2 cut(s) 877, 1613
PflMI CCANNNNNTGG 1 cut(s) 942
PfoI TCCNGGA 1 cut(s) 1087
PinAI ACCGGT 1 cut(s) 441
PscI ACATGT 1 cut(s) 3148
PshAI GACNNNNGTC 1 cut(s) 1906
PsiI TTATAA 1 cut(s) 2165
Psp6I CCWGG 4 cut(s) 911, 1087, 1215, 1688
PspFI CCCAGC 3 cut(s) 790, 2091, 2297
PspGI CCWGG 4 cut(s) 911, 1087, 1215, 1688
PspN4I GGNNCC 7 cut(s) 917, 1198, 1411, 1824, 1898, 2531, 3019
PspPI GGNCC 4 cut(s) 101, 140, 630, 2284
PstI CTGCAG 4 cut(s) 354, 2434, 2842, 2934
PsuI RGATCY 6 cut(s) 285, 346, 1668, 1762, 1796, 3126
PsyI GACNNNGTC 2 cut(s) 877, 1613
PvuII CAGCTG 5 cut(s) 355, 599, 2301, 2441, 3029
RruI TCGCGA 1 cut(s) 1278
RsaI GTAC 5 cut(s) 917, 969, 1011, 1411, 1898
RsaNI GTAC 5 cut(s) 916, 968, 1010, 1410, 1897
RseI CAYNNNNRTG 2 cut(s) 737, 1070
SacII CCGCGG 1 cut(s) 1494
SalI GTCGAC 1 cut(s) 1331
SapI GCTCTTC 1 cut(s) 765
SaqAI TTAA 8 cut(s) 330, 468, 500, 921, 1832, 2195, 2489, 2580
Sau96I GGNCC 4 cut(s) 101, 140, 630, 2284
ScaI AGTACT 1 cut(s) 1011
ScrFI CCNGG 9 cut(s) 913, 1089, 1217, 1690, 1913, 1948, 1968, 1969, 2316
SduI GDGCHC 3 cut(s) 201, 1422, 2534
SfaNI GCATC 8 cut(s) 617, 653, 2191, 2328, 2356, 2721, 2904, 2944
SfcI CTRYAG 4 cut(s) 350, 2430, 2838, 2930
Sfr274I CTCGAG 2 cut(s) 391, 1605
Sfr303I CCGCGG 1 cut(s) 1494
SfuI TTCGAA 2 cut(s) 545, 2042
SgrAI CRCCGGYG 2 cut(s) 1139, 2104
SgrBI CCGCGG 1 cut(s) 1494
SinI GGWCC 2 cut(s) 140, 2284
SlaI CTCGAG 2 cut(s) 391, 1605
SmaI CCCGGG 1 cut(s) 1969
SmiMI CAYNNNNRTG 2 cut(s) 737, 1070
SmlI CTYRAG 3 cut(s) 391, 1605, 2807
SmoI CTYRAG 3 cut(s) 391, 1605, 2807
SspMI CTAG 4 cut(s) 666, 2423, 2477, 2610
StyD4I CCNGG 9 cut(s) 911, 1087, 1215, 1688, 1911, 1946, 1966, 1967, 2314
StyI CCWWGG 4 cut(s) 626, 665, 819, 2520
TaaI ACNGT 6 cut(s) 421, 657, 926, 2326, 2884, 3014
TaiI ACGT 9 cut(s) 580, 771, 878, 888, 1018, 1230, 1263, 1332, 3164
TatI WGTACW 2 cut(s) 967, 1009
TauI GCSGC 6 cut(s) 117, 155, 1395, 1877, 2135, 2438
TfiI GAWTC 8 cut(s) 205, 638, 686, 1026, 1092, 1478, 2234, 2600
Tru1I TTAA 8 cut(s) 330, 468, 500, 921, 1832, 2195, 2489, 2580
Tru9I TTAA 8 cut(s) 330, 468, 500, 921, 1832, 2195, 2489, 2580
TscAI CASTG 7 cut(s) 127, 345, 365, 2274, 2329, 2659, 2842
TseFI GTSAC 4 cut(s) 58, 395, 651, 1135
Tsp45I GTSAC 4 cut(s) 58, 395, 651, 1135
TspDTI ATGAA 9 cut(s) 497, 525, 968, 1133, 1489, 2318, 2346, 2586, 2888
TspGWI ACGGA 4 cut(s) 77, 153, 1039, 2739
TspMI CCCGGG 1 cut(s) 1967
TspRI CASTG 7 cut(s) 127, 345, 365, 2274, 2329, 2659, 2842
Tth111I GACNNNGTC 2 cut(s) 877, 1613
Van91I CCANNNNNTGG 1 cut(s) 942
VpaK11BI GGWCC 2 cut(s) 140, 2284
XapI RAATTY 5 cut(s) 496, 1630, 1636, 1642, 2646
XceI RCATGY 2 cut(s) 2497, 3152
XcmI CCANNNNNNNNNTGG 2 cut(s) 1403, 2014
XhoI CTCGAG 2 cut(s) 391, 1605
XmaI CCCGGG 1 cut(s) 1967
XmaJI CCTAGG 1 cut(s) 665
XmiI GTMKAC 2 cut(s) 1332, 1439
XmnI GAANNNNTTC 1 cut(s) 959
XspI CTAG 4 cut(s) 666, 2423, 2477, 2610
ZrmI AGTACT 1 cut(s) 1011
Zsp2I ATGCAT 2 cut(s) 610, 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.