Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0005766

Physical Location & Seq

Genomic Coordinates Forward (+)

12278033 .. 12285550

Gene Structure 7518 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGTACGAAATAAATAATTCGGATCTGAATTATCCCCTTCTCCTTAAAATACAATATACAATATACAACCCACAATCCAATTCAAATCAAATACGTGAAATAACTAACAAATTCTTTATTCTTGACCGTTGCAAGATTATCCATCACACGTGCCGCCCTGTTTTGAACCCAAAGCCAAAGCCCCTCTCTCCCCTCTCCGAATCAGAACCAGCAGCCATGGAAGCGATACTCCGAGACTGTGTCCAGCACAGTCTCCGCGATTTCATGCACCGAAACGCCATTTTCGTATGCGAACGCCTCTGCGCCGAGTTCCCCTCCGAGACGAATTTACAGTTGTTAGCTGGCTGTTACTTGCAAAGCAATCAAGCTTATGCTGCATACCATATTTTAAAGGGAACACAAGTGGCTCAATCCCGCTACTTGTTTGCGATATCATGCTTTCAGATGGATCTTCTTGGTGAAGCAGAAGCAGCATTATGTCCTGCTAATGAGCCTGGTGCAGAGGTTCCAAATGGTGCAGCTGGTCATTACCTTCTGGGGCTTATATACAGGTATACTGACAGAAGGAAAAGTGCCATCCATCACTTTAAGCAGGCCTTGACTATGGATCCTTGTATGTGGGCTGCATATGAAGAACTGTGCGTATTAGGCTCTGCTGAAGAAGCAGCTGTAGTTTTTGGTGAAGCTGCTGTTCTTTCCATACAAAAACAGTATCTACATCATGGATTAGCTTCTCAAAGTTTACTTACCCTGAATGAGGACTGCAGTTTAGTTTCTGGTAGGAACTTTAGCTCCGAAGATGTTAGCCAGAGACAATTCAAACATGTTCAAGGAAATAATATAAGAGATATGTCTGGAAATTCTCATATTAGTTTGGGAGGAGCTTCTGGTCAGCCTGTAAATGGCAGTTCTGGTTCATCTTTCTTTAACACTCCTTCACCAATGCCCATGCAGTTGTCAGGTGTTGCTCCACCAGCTCTGTGTAGAATTGGTCAGCCAAATGGCCCAAACCTAAACACGGGTACTGATAGCTCTCCAAAGTCAAATGTGAACTCTACAATTCAAGCCCCCAGAAGAAAGTTTGTTGATGAAGGAAAACTCCGCAAGATTTCAAGCAGGTTGTCTTTTGATTCTGGCAACCGGCGGAGCAATAGACTTGCTGCTGAAGCAGGGACCAACACTAATGCAAGTGCCTCAGTGACAGCCGGAAATGGAACTACCAATTCATCTAAATATCTTGGGAGTTCCAAGCTGAGCTCTGTTGCGCGTTCCTTGGCAAATCGTAAGGGGCAGCCATGGGCTAATGAAAATGTTGATGAAGGAATGCGCAACGAGACATTCGATGATTCCCGTTCAACAACTGCGGCAGTAGCTTCTGGTTTCACTCCCTCTAGTGATGCCAGATATCTTGAACAAGAAGGAGCAACCTTGTCAAGTACTGGAGGTATTATCAATGTTTCAAGAGTTGCCACTGGAGCTTCAGAAATATTGAGTCTTTTGAGAACTCTTGGGGAAGGCTATAGACTTTCCTGCATGTACAGATGCCAGGATGCACTGGATGTCTATCTCAAACTTCCATACAAGCATTACAATACAGGATGGGTGCTTTCCCAGGTTGGAAAAGCTTACTGTGAATTGATAGACTATTCAGAAGCTGATCGGGCCTTCAGTCTTGCTCGTCAGGCATCACCTTACAGTTTAGAAGGAATGGATATGTATTCTACAGTTCTTTATCATTTGAAGGAAGATATGAAGTTAAGTTACCTGGCTCAAGAGCTGATATCAACGGACCGCTTAGCTTCTCAGTCGTGGGTTGCAATGGGAAATTGCTATAGCTTGCAGAAAGACCATGAAACTGCTCTGAAATTTTTCCAGCGAGCAGTTCAAGTCAATTCAAGATTCACATATGCACATACCCTTTGCGGTCACGAATATGTAGCTCTAGAGGATTTTGAGAATGGAATAAAGAGCTATCAGACTGCACTTCGTATTGATGCAAGGCATTATAATGCCTGGTATGGGCTTGGAATGGTTTATCATCGCCAAGAAAAATTTGAGTTCTCAGAGCATCACTTCCGAACGGCTTTCCAAATTAATCCACGTTCTTCTGTTATTATGACGTATCTTGCCTCAGCATTGCATGCTTTAAAGAGAAGCGAAGAAGCTCTAGTGATGATGGAGAAGGCTATTAGAGCAGACAAGAAGAATCCACTTCCCATGTATCATAAGGCTAGTATACTGATGAGCTTAGAAAAATTTGATGAAGCTCTAGCAGTCTTAGAGGAGGTTAAAGAATATTCTCCTCGTGAAAGTAGTGTGTACGCTCTGATGGGTAAAATCTACAAGCGGCGTAATATGCACGAGAAAGCGATGCTTCATTTCGGTTATGCATTGGATTTGAAACCATCCGCAACTGACGTCGCTACCATTAAGGCTGACATTGAGAAGTTACATGTACCTGACGAACTAGACGATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005680 GO:0005737 GO:0005819 GO:0005856 GO:0007275 GO:0007346 GO:0008150 GO:0009504 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0010015 GO:0010033 GO:0010071 GO:0010154 GO:0015630 GO:0022414 GO:0022622 GO:0030154 GO:0031461 GO:0032501 GO:0032502 GO:0032991 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048829 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051726 GO:0061458 GO:0065007 GO:0090421 GO:0099402 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC3 TPR_1 TPR_16 TPR_19 TPR_2 TPR_8

Protein Analysis

827

Amino Acids

91.98

Weight (kDa)

6.82

Isoelectric Point (pI)

43.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANAPC3	PF12895	88 - 160	8.5e-17	Anaphase-promoting complex, cyclosome, subunit 3
TPR_1	PF00515	602 - 633	3.7e-06	Tetratricopeptide repeat
TPR_11	PF13414	642 - 682	5.8e-07	TPR repeat
TPR_12	PF13424	670 - 735	2.3e-06	Tetratricopeptide repeat
TPR_19	PF14559	715 - 780	2e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0005766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20000 AT2G20000
fragaria_vesca	FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910
malus_domestica	MD02G1061000.v1.1 MD15G1194500.v1.1
prunus_persica	Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1
pyrus_communis	pycom02g05010 pycom15g17410
rosa_chinensis	RchiOBHm_Chr2g0091551 RchiOBHm_Chr2g0091631
rosa_laevigata	RLG00000016236
rosa_multiflora	Rmu_sc0000897.1_g000018
rosa_roxburghii	Rroxscaffold_2G00149940
rosa_rugosa	Rorug02G0018700 Rorug02G0018700
rosa_samantha	Rh2AG063900 Rh2BG063300 Rh2CG065000 Rh2DG063400
rosa_wichuraiana	Rw2G005650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2007
AatII	GACGTC	1 cut(s)	2421
Acc16I	TGCGCA	1 cut(s)	1328
Acc36I	ACCTGC	1 cut(s)	1107
AccI	GTMKAC	2 cut(s)	554, 2236
AccII	CGCG	2 cut(s)	258, 1267
AclWI	GGATC	4 cut(s)	30, 456, 602, 615
AcsI	RAATTY	6 cut(s)	110, 325, 859, 1865, 2051, 2255
AcuI	CTGAAG	4 cut(s)	678, 1185, 1464, 1651
AcvI	CACGTG	1 cut(s)	150
AcyI	GRCGYC	1 cut(s)	2418
AfaI	GTAC	6 cut(s)	5, 1024, 1438, 1538, 2321, 2457
AfiI	CCNNNNNNNGG	4 cut(s)	757, 902, 1018, 2019
AflIII	ACRYGT	3 cut(s)	147, 823, 2452
AjnI	CCWGG	5 cut(s)	493, 1545, 1611, 1764, 2012
AloI	GAACNNNNNNTCC	2 cut(s)	776, 808
Alw21I	GWGCWC	1 cut(s)	1259
Alw26I	GTCTC	5 cut(s)	228, 257, 314, 805, 1328
AlwI	GGATC	4 cut(s)	30, 456, 602, 615
AlwNI	CAGNNNCTG	1 cut(s)	1655
AoxI	GGCC	3 cut(s)	594, 1003, 1662
ApeKI	GCWGC	9 cut(s)	212, 374, 470, 518, 623, 665, 686, 1160, 1291
ApoI	RAATTY	6 cut(s)	110, 325, 859, 1865, 2051, 2255
AseI	ATTAAT	1 cut(s)	2094
Asp700I	GAANNNNTTC	1 cut(s)	1868
AspLEI	GCGC	3 cut(s)	305, 1267, 1329
AspS9I	GGNCC	4 cut(s)	1004, 1173, 1662, 1789
AsuHPI	GGTGA	4 cut(s)	470, 692, 930, 1680
AvaII	GGWCC	2 cut(s)	1173, 1789
BamHI	GGATCC	1 cut(s)	607
BanII	GRGCYC	1 cut(s)	1259
BarI	GAAGNNNNNNTAC	2 cut(s)	1745, 1777
BauI	CACGAG	2 cut(s)	2304, 2360
BbrPI	CACGTG	1 cut(s)	150
Bbv12I	GWGCWC	1 cut(s)	1259
BbvCI	CCTCAGC	1 cut(s)	2131
BbvI	GCAGC	9 cut(s)	224, 361, 482, 530, 610, 673, 677, 1147, 1303
BccI	CCATC	8 cut(s)	150, 439, 584, 588, 1593, 2170, 2323, 2413
BceAI	ACGGC	1 cut(s)	2097
BciT130I	CCWGG	5 cut(s)	495, 1547, 1613, 1766, 2014
BcoDI	GTCTC	5 cut(s)	228, 257, 314, 805, 1328
BfaI	CTAG	6 cut(s)	1392, 1943, 2168, 2232, 2270, 2468
BfmI	CTRYAG	5 cut(s)	669, 763, 1519, 1722, 1831
BfuAI	ACCTGC	1 cut(s)	1107
BlpI	GCTNAGC	2 cut(s)	1253, 1795
BmcAI	AGTACT	1 cut(s)	1438
Bme1390I	CCNGG	5 cut(s)	495, 1547, 1613, 1766, 2014
Bme18I	GGWCC	2 cut(s)	1173, 1789
BmgT120I	GGNCC	4 cut(s)	1004, 1173, 1662, 1789
BmiI	GGNNCC	3 cut(s)	507, 609, 1174
BmrFI	CCNGG	5 cut(s)	495, 1547, 1613, 1766, 2014
BmsI	GCATC	7 cut(s)	1387, 1532, 1540, 1694, 1984, 2077, 2361
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	2 cut(s)	1461, 1494
Bpu10I	CCTNAGC	1 cut(s)	2131
Bpu1102I	GCTNAGC	2 cut(s)	1253, 1795
BpuEI	CTTGAG	1 cut(s)	1755
BsaAI	YACGTR	2 cut(s)	95, 150
BsaBI	GATNNNNATC	1 cut(s)	1563
BsaHI	GRCGYC	1 cut(s)	2418
BsaJI	CCNNGG	4 cut(s)	216, 1272, 1295, 1611
BsaXI	ACNNNNNCTCC	2 cut(s)	776, 806
Bsc4I	CCNNNNNNNGG	4 cut(s)	757, 902, 1018, 2019
Bse118I	RCCGGY	1 cut(s)	1140
Bse1I	ACTGG	3 cut(s)	1444, 1477, 1560
Bse3DI	GCAATG	2 cut(s)	1824, 2135
Bse8I	GATNNNNATC	1 cut(s)	1563
BseBI	CCWGG	5 cut(s)	495, 1547, 1613, 1766, 2014
BseDI	CCNNGG	4 cut(s)	216, 1272, 1295, 1611
BseGI	GGATG	5 cut(s)	576, 1555, 1564, 1604, 2405
BseJI	GATNNNNATC	1 cut(s)	1563
BseLI	CCNNNNNNNGG	4 cut(s)	757, 902, 1018, 2019
BseMI	GCAATG	2 cut(s)	1824, 2135
BseMII	CTCAG	5 cut(s)	1209, 1244, 1817, 2076, 2145
BseNI	ACTGG	3 cut(s)	1444, 1477, 1560
BseRI	GAGGAG	3 cut(s)	894, 2292, 2297
BseXI	GCAGC	9 cut(s)	224, 361, 482, 530, 610, 673, 677, 1147, 1303
BsgI	GTGCAG	3 cut(s)	519, 537, 1965
Bsh1236I	CGCG	2 cut(s)	258, 1267
BshFI	GGCC	3 cut(s)	596, 1005, 1664
BsiHKAI	GWGCWC	1 cut(s)	1259
BsiSI	CCGG	2 cut(s)	1141, 1206
BslFI	GGGAC	1 cut(s)	1186
BslI	CCNNNNNNNGG	4 cut(s)	757, 902, 1018, 2019
BsmAI	GTCTC	5 cut(s)	228, 257, 314, 805, 1328
BsmBI	CGTCTC	1 cut(s)	314
BsmFI	GGGAC	1 cut(s)	1186
BsmI	GAATGC	1 cut(s)	1329
BsnI	GGCC	3 cut(s)	596, 1005, 1664
Bsp1286I	GDGCHC	1 cut(s)	1259
Bsp1407I	TGTACA	1 cut(s)	1536
Bsp143I	GATC	4 cut(s)	22, 448, 607, 1657
Bsp1720I	GCTNAGC	2 cut(s)	1253, 1795
Bsp19I	CCATGG	2 cut(s)	216, 1295
BspANI	GGCC	3 cut(s)	596, 1005, 1664
BspCNI	CTCAG	5 cut(s)	1208, 1245, 1816, 2075, 2144
BspFNI	CGCG	2 cut(s)	258, 1267
BspLI	GGNNCC	3 cut(s)	507, 609, 1174
BspMAI	CTGCAG	1 cut(s)	767
BspMI	ACCTGC	1 cut(s)	1107
BspPI	GGATC	4 cut(s)	30, 456, 602, 615
BsrDI	GCAATG	2 cut(s)	1824, 2135
BsrFI	RCCGGY	1 cut(s)	1140
BsrGI	TGTACA	1 cut(s)	1536
BsrI	ACTGG	3 cut(s)	1444, 1477, 1560
BssAI	RCCGGY	1 cut(s)	1140
BssECI	CCNNGG	4 cut(s)	216, 1272, 1295, 1611
BssMI	GATC	4 cut(s)	22, 448, 607, 1657
BssNAI	GTATAC	2 cut(s)	555, 2237
BssNI	GRCGYC	1 cut(s)	2418
BssSI	CACGAG	2 cut(s)	2304, 2360
BssT1I	CCWWGG	3 cut(s)	216, 1272, 1295
Bst1107I	GTATAC	2 cut(s)	555, 2237
Bst2BI	CACGAG	2 cut(s)	2304, 2360
Bst2UI	CCWGG	5 cut(s)	495, 1547, 1613, 1766, 2014
Bst4CI	ACNGT	9 cut(s)	128, 239, 251, 333, 639, 711, 1631, 1697, 1726
BstACI	GRCGYC	1 cut(s)	2418
BstAPI	GCANNNNNTGC	1 cut(s)	2141
BstAUI	TGTACA	1 cut(s)	1536
BstBAI	YACGTR	2 cut(s)	95, 150
BstC8I	GCNNGC	5 cut(s)	343, 594, 1838, 1878, 2142
BstDEI	CTNAG	8 cut(s)	1195, 1253, 1795, 1803, 2062, 2131, 2248, 2278
BstDSI	CCRYGG	2 cut(s)	216, 1295
BstENI	CCTNNNNNAGG	1 cut(s)	755
BstF5I	GGATG	5 cut(s)	576, 1555, 1564, 1604, 2405
BstFNI	CGCG	2 cut(s)	258, 1267
BstHHI	GCGC	3 cut(s)	305, 1267, 1329
BstKTI	GATC	4 cut(s)	25, 451, 610, 1660
BstMAI	GTCTC	5 cut(s)	228, 257, 314, 805, 1328
BstMBI	GATC	4 cut(s)	22, 448, 607, 1657
BstNI	CCWGG	5 cut(s)	495, 1547, 1613, 1766, 2014
BstNSI	RCATGY	4 cut(s)	827, 1537, 2144, 2456
BstSCI	CCNGG	5 cut(s)	493, 1545, 1611, 1764, 2012
BstSFI	CTRYAG	5 cut(s)	669, 763, 1519, 1722, 1831
BstUI	CGCG	2 cut(s)	258, 1267
BstV1I	GCAGC	9 cut(s)	224, 361, 482, 530, 610, 673, 677, 1147, 1303
BstX2I	RGATCY	3 cut(s)	22, 448, 607
BstYI	RGATCY	3 cut(s)	22, 448, 607
BstZ17I	GTATAC	2 cut(s)	555, 2237
BsuRI	GGCC	3 cut(s)	596, 1005, 1664
BtgI	CCRYGG	2 cut(s)	216, 1295
BtgZI	GCGATG	2 cut(s)	2024, 2384
BtsCI	GGATG	5 cut(s)	576, 1555, 1564, 1604, 2405
BtsIMutI	CAGTG	3 cut(s)	1203, 1470, 1553
BveI	ACCTGC	1 cut(s)	1107
Cac8I	GCNNGC	5 cut(s)	343, 594, 1838, 1878, 2142
CaiI	CAGNNNCTG	1 cut(s)	1655
CfoI	GCGC	3 cut(s)	305, 1267, 1329
Cfr10I	RCCGGY	1 cut(s)	1140
Cfr13I	GGNCC	4 cut(s)	1004, 1173, 1662, 1789
CpoI	CGGWCCG	1 cut(s)	1789
Csp6I	GTAC	6 cut(s)	4, 1023, 1437, 1537, 2320, 2456
CspI	CGGWCCG	1 cut(s)	1789
CviQI	GTAC	6 cut(s)	4, 1023, 1437, 1537, 2320, 2456
DdeI	CTNAG	8 cut(s)	1195, 1253, 1795, 1803, 2062, 2131, 2248, 2278
DpnI	GATC	4 cut(s)	24, 450, 609, 1659
DpnII	GATC	4 cut(s)	22, 448, 607, 1657
DraI	TTTAAA	2 cut(s)	390, 2148
EciI	GGCGGA	1 cut(s)	1159
Ecl136II	GAGCTC	1 cut(s)	1257
Eco130I	CCWWGG	3 cut(s)	216, 1272, 1295
Eco147I	AGGCCT	1 cut(s)	596
Eco24I	GRGCYC	1 cut(s)	1259
Eco32I	GATATC	3 cut(s)	432, 1406, 1782
Eco47I	GGWCC	2 cut(s)	1173, 1789
Eco53kI	GAGCTC	1 cut(s)	1257
Eco57I	CTGAAG	4 cut(s)	678, 1185, 1464, 1651
Eco72I	CACGTG	1 cut(s)	150
EcoICRI	GAGCTC	1 cut(s)	1257
EcoNI	CCTNNNNNAGG	1 cut(s)	755
EcoRII	CCWGG	5 cut(s)	493, 1545, 1611, 1764, 2012
EcoRV	GATATC	3 cut(s)	432, 1406, 1782
EcoT14I	CCWWGG	3 cut(s)	216, 1272, 1295
EcoT22I	ATGCAT	1 cut(s)	2392
EcoT38I	GRGCYC	1 cut(s)	1259
ErhI	CCWWGG	3 cut(s)	216, 1272, 1295
Esp3I	CGTCTC	1 cut(s)	314
FalI	AAGNNNNNCTT	4 cut(s)	581, 613, 2358, 2390
FaqI	GGGAC	1 cut(s)	1186
FauI	CCCGC	1 cut(s)	422
FauNDI	CATATG	2 cut(s)	628, 1906
FblI	GTMKAC	2 cut(s)	554, 2236
FokI	GGATG	5 cut(s)	563, 1562, 1571, 1611, 2392
FriOI	GRGCYC	1 cut(s)	1259
FspBI	CTAG	6 cut(s)	1392, 1943, 2168, 2232, 2270, 2468
FspI	TGCGCA	1 cut(s)	1328
GlaI	GCGC	3 cut(s)	304, 1266, 1328
GsuI	CTGGAG	2 cut(s)	1461, 1494
HaeIII	GGCC	3 cut(s)	596, 1005, 1664
HapII	CCGG	2 cut(s)	1141, 1206
HhaI	GCGC	3 cut(s)	305, 1267, 1329
Hin1I	GRCGYC	1 cut(s)	2418
Hin6I	GCGC	3 cut(s)	303, 1265, 1327
HinP1I	GCGC	3 cut(s)	303, 1265, 1327
HindIII	AAGCTT	2 cut(s)	366, 1623
HinfI	GANTC	6 cut(s)	200, 1130, 1346, 1492, 1899, 2206
HpaII	CCGG	2 cut(s)	1141, 1206
HphI	GGTGA	4 cut(s)	470, 692, 930, 1680
Hpy166II	GTNNAC	5 cut(s)	555, 743, 1051, 2237, 2320
Hpy188III	TCNNGA	9 cut(s)	122, 855, 1409, 1461, 1772, 1896, 1928, 1943, 2306
Hpy8I	GTNNAC	5 cut(s)	555, 743, 1051, 2237, 2320
Hpy99I	CGWCG	1 cut(s)	2423
HpyCH4III	ACNGT	9 cut(s)	128, 239, 251, 333, 639, 711, 1631, 1697, 1726
HpyCH4IV	ACGT	5 cut(s)	94, 149, 2101, 2120, 2418
HpyF3I	CTNAG	8 cut(s)	1195, 1253, 1795, 1803, 2062, 2131, 2248, 2278
HpySE526I	ACGT	5 cut(s)	94, 149, 2101, 2120, 2418
Hsp92I	GRCGYC	1 cut(s)	2418
HspAI	GCGC	3 cut(s)	303, 1265, 1327
Kzo9I	GATC	4 cut(s)	22, 448, 607, 1657
LmnI	GCTCC	6 cut(s)	797, 881, 973, 1146, 1421, 1475
Lsp1109I	GCAGC	9 cut(s)	224, 361, 482, 530, 610, 673, 677, 1147, 1303
LweI	GCATC	7 cut(s)	1387, 1532, 1540, 1694, 1984, 2077, 2361
MaeI	CTAG	6 cut(s)	1392, 1943, 2168, 2232, 2270, 2468
MaeII	ACGT	5 cut(s)	94, 149, 2101, 2120, 2418
MaeIII	GTNAC	5 cut(s)	347, 1198, 1760, 1925, 2448
MalI	GATC	4 cut(s)	24, 450, 609, 1659
MboI	GATC	4 cut(s)	22, 448, 607, 1657
MboII	GAAGA	9 cut(s)	443, 644, 671, 809, 1086, 1757, 2097, 2171, 2215
MflI	RGATCY	3 cut(s)	22, 448, 607
MhlI	GDGCHC	1 cut(s)	1259
MlyI	GAGTC	1 cut(s)	1501
MmeI	TCCRAC	1 cut(s)	1597
Mph1103I	ATGCAT	1 cut(s)	2392
MroXI	GAANNNNTTC	1 cut(s)	1868
MseI	TTAA	9 cut(s)	45, 389, 588, 927, 1757, 2094, 2147, 2289, 2430
MslI	CAYNNNNRTG	2 cut(s)	1932, 2007
MspA1I	CMGCKG	2 cut(s)	521, 668
MspI	CCGG	2 cut(s)	1141, 1206
MspR9I	CCNGG	5 cut(s)	495, 1547, 1613, 1766, 2014
Mva1269I	GAATGC	1 cut(s)	1329
MvaI	CCWGG	5 cut(s)	495, 1547, 1613, 1766, 2014
MvnI	CGCG	2 cut(s)	258, 1267
NcoI	CCATGG	2 cut(s)	216, 1295
NdeI	CATATG	2 cut(s)	628, 1906
NdeII	GATC	4 cut(s)	22, 448, 607, 1657
NlaIV	GGNNCC	3 cut(s)	507, 609, 1174
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	2 cut(s)	1198, 1925
NsbI	TGCGCA	1 cut(s)	1328
NsiI	ATGCAT	1 cut(s)	2392
NspI	RCATGY	4 cut(s)	827, 1537, 2144, 2456
PaeI	GCATGC	1 cut(s)	2144
PceI	AGGCCT	1 cut(s)	596
PciI	ACATGT	2 cut(s)	823, 2452
PcsI	WCGNNNNNNNCGW	3 cut(s)	282, 1338, 2469
PctI	GAATGC	1 cut(s)	1329
PdmI	GAANNNNTTC	1 cut(s)	1868
PfeI	GAWTC	5 cut(s)	200, 1130, 1346, 1899, 2206
PflFI	GACNNNGTC	1 cut(s)	239
PleI	GAGTC	1 cut(s)	1500
PmaCI	CACGTG	1 cut(s)	150
PmlI	CACGTG	1 cut(s)	150
PpsI	GAGTC	1 cut(s)	1500
Ppu21I	YACGTR	2 cut(s)	95, 150
PscI	ACATGT	2 cut(s)	823, 2452
PshBI	ATTAAT	1 cut(s)	2094
PsiI	TTATAA	1 cut(s)	2007
Psp124BI	GAGCTC	1 cut(s)	1259
Psp6I	CCWGG	5 cut(s)	493, 1545, 1611, 1764, 2012
PspCI	CACGTG	1 cut(s)	150
PspGI	CCWGG	5 cut(s)	493, 1545, 1611, 1764, 2012
PspN4I	GGNNCC	3 cut(s)	507, 609, 1174
PspPI	GGNCC	4 cut(s)	1004, 1173, 1662, 1789
PstI	CTGCAG	1 cut(s)	767
PstNI	CAGNNNCTG	1 cut(s)	1655
PsuI	RGATCY	3 cut(s)	22, 448, 607
PsyI	GACNNNGTC	1 cut(s)	239
PvuII	CAGCTG	2 cut(s)	521, 668
RsaI	GTAC	6 cut(s)	5, 1024, 1438, 1538, 2321, 2457
RsaNI	GTAC	6 cut(s)	4, 1023, 1437, 1537, 2320, 2456
RseI	CAYNNNNRTG	2 cut(s)	1932, 2007
Rsr2I	CGGWCCG	1 cut(s)	1789
RsrII	CGGWCCG	1 cut(s)	1789
SacI	GAGCTC	1 cut(s)	1259
SaqAI	TTAA	9 cut(s)	45, 389, 588, 927, 1757, 2094, 2147, 2289, 2430
Sau3AI	GATC	4 cut(s)	22, 448, 607, 1657
Sau96I	GGNCC	4 cut(s)	1004, 1173, 1662, 1789
ScaI	AGTACT	1 cut(s)	1438
SchI	GAGTC	1 cut(s)	1501
ScrFI	CCNGG	5 cut(s)	495, 1547, 1613, 1766, 2014
SduI	GDGCHC	1 cut(s)	1259
SfaNI	GCATC	7 cut(s)	1387, 1532, 1540, 1694, 1984, 2077, 2361
SfcI	CTRYAG	5 cut(s)	669, 763, 1519, 1722, 1831
SinI	GGWCC	2 cut(s)	1173, 1789
SmiMI	CAYNNNNRTG	2 cut(s)	1932, 2007
SmlI	CTYRAG	1 cut(s)	1770
SmoI	CTYRAG	1 cut(s)	1770
SphI	GCATGC	1 cut(s)	2144
SseBI	AGGCCT	1 cut(s)	596
SspI	AATATT	2 cut(s)	1488, 2297
SspMI	CTAG	6 cut(s)	1392, 1943, 2168, 2232, 2270, 2468
SstI	GAGCTC	1 cut(s)	1259
StuI	AGGCCT	1 cut(s)	596
StyD4I	CCNGG	5 cut(s)	493, 1545, 1611, 1764, 2012
StyI	CCWWGG	3 cut(s)	216, 1272, 1295
TaaI	ACNGT	9 cut(s)	128, 239, 251, 333, 639, 711, 1631, 1697, 1726
TaiI	ACGT	5 cut(s)	97, 152, 2104, 2123, 2421
TaqI	TCGA	1 cut(s)	1341
TatI	WGTACW	2 cut(s)	1436, 1536
TauI	GCSGC	3 cut(s)	156, 1367, 2350
TfiI	GAWTC	5 cut(s)	200, 1130, 1346, 1899, 2206
Tru1I	TTAA	9 cut(s)	45, 389, 588, 927, 1757, 2094, 2147, 2289, 2430
Tru9I	TTAA	9 cut(s)	45, 389, 588, 927, 1757, 2094, 2147, 2289, 2430
TscAI	CASTG	3 cut(s)	1203, 1477, 1560
TseFI	GTSAC	2 cut(s)	1198, 1925
TseI	GCWGC	9 cut(s)	212, 374, 470, 518, 623, 665, 686, 1160, 1291
Tsp45I	GTSAC	2 cut(s)	1198, 1925
TspGWI	ACGGA	1 cut(s)	1802
TspRI	CASTG	3 cut(s)	1203, 1477, 1560
Tth111I	GACNNNGTC	1 cut(s)	239
VpaK11BI	GGWCC	2 cut(s)	1173, 1789
VspI	ATTAAT	1 cut(s)	2094
XagI	CCTNNNNNAGG	1 cut(s)	755
XapI	RAATTY	6 cut(s)	110, 325, 859, 1865, 2051, 2255
XbaI	TCTAGA	1 cut(s)	1942
XceI	RCATGY	4 cut(s)	827, 1537, 2144, 2456
XmiI	GTMKAC	2 cut(s)	554, 2236
XmnI	GAANNNNTTC	1 cut(s)	1868
XspI	CTAG	6 cut(s)	1392, 1943, 2168, 2232, 2270, 2468
ZraI	GACGTC	1 cut(s)	2419
ZrmI	AGTACT	1 cut(s)	1438
Zsp2I	ATGCAT	1 cut(s)	2392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.