Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0014633

Physical Location & Seq

Genomic Coordinates Reverse (-)

12851207 .. 12853466

Gene Structure 2260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g18120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGTGCAAAGCACACAATGAAAAAATGACCCAATTTTCCCCCATCAGTTCCACATCTGCCTTCTCTTCGCTTTTCACTGGTCGTAGCAGTTTTACCACCACCACAACCATGGCTCCTCTAACTTCTCTTCCCCCAAGGGCCCCAACCGGAAACTACATCGTCTATACCCGGTTCAAATCCCGGGTCGACCCGAATCTGCACGACCAGCTCTTTCTCAATCCCACTCTTTCTTCCGTCCTAAAAATCCAACCTTCTTCTTCCTCCTTCAACGCCGCCCCATTCAACCCGCTCTGCACATCCGCCGTCCCCAGCGCCAACAATCCCAGAGTCCGCCGCCGCAACAACGGCTCTTCTCCGCCCCCACCCACAACATCTGGCGCCAATTCCCAGTACAAGACCCAACCTTTACGCAAGGACAACAGGACCCAGCAACCAAATGAACCAAAAGTTGACAGAAATGAATCGAACACCCAAAATGTGAGCGCCCCACTACGTATGAACTCAAAAGATGTGGATTTGATGCGTTTGTGCGAGGAGGGTAAGGTCGGAGAAGCGTTGGAGTTTATGGGTCGAGGTGTTTCCGCCGATTACGGAGTTTTCTGTGTGTTATTGGAATCGTGTGATGGATCGAAGTCGCTTGAGATTGGGAGGAAGGTCCACGAGTTCATGAGACAGTCGCCGTTTCGCAGGGATATTGAGTTGAACACTAAATTGGTTCAAATGTATGGGAGATGTGGGAGTATGAGAGATGCGCGCAAGGTGTTTGATAGAATGCGCGAGCGGAGCATTGGTTTGTGGCATTCGATGATCACTGGGTATGCAGTGAATGGGCAGGGTGACGAGGGGATGCTGTTGTTTGAACAAATGAGGAATTCGGGGTTGGAGCCGGATAAGCAGACTTTTTTAGTGGCGTTGGGGGCGTGTGCTAGTGCGGAAGCTGTAGCAGAAGGGTTTGCGCTCTTCAAATCAATGAAGAATGAGTATGAGATTGTACCGGAGATTGAGCATTATTTAGGACTTATTGATGTTCTTGGGAAGTCTGGTCATTTGAATGAAGTCGAGGAGTTCATTGAGAAAATGCCATTTGAGCCTACAGTTGAAGTTTGGGAGGCTCTTAGGAACTCTGCGCGAATTCATGGAGATATTGAACTAGAAGATCGTGCGGAGGAATTGTTGGTTAATATTGATCCTTCTAAGGCCAATGCTGACAAAATCCCATTGCCTCCGCGGAAGATGCACTTGGAGCTTAACATGCTTGAGGAGAAGAATAAGGTGGGTGAGTATCGGAGTACAAACGAGGCGTATGAGAAATTGAAAGGTTTGAAAGGACAGATGAGGGAAGCAGGTTATGTGCCGGATACAAGATACGTACTTCATGACATCGATCAGGAGGCAAAAGAGCAGGCATTGCAGTATCATAGCGAGCGTTTGGCAATTGCTTATGGTCTGATCAGTACTCCAGCCAGGCAAACTCTGAGGATAATTAAGAATCTTCGAATCTGCGGTGACTGCCATAATGCGATAAAAATCATGTCGAAGATTGTTGGGAGGGAGCTGATCGTTAGGGATAACAAGCGGTTCCATCATTTCAGGGATGGGAAGTTCCGCCGAATGCTTAAACTCATCTCGAAGCTTATTATTCAATTGAATGAGAATCTTCTATCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006534 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009069 GO:0009070 GO:0009987 GO:0016053 GO:0019344 GO:0019752 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

556

Amino Acids

62.71

Weight (kDa)

8.86

Isoelectric Point (pI)

45.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	265 - 309	1.5e-07	PPR repeat family
DYW_deaminase	PF14432	449 - 534	2.6e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014633)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g07130
malus_domestica	MD02G1075300.v1.1 MD02G1075700.v1.1 MD15G1204400.v1.1
prunus_persica	Prupe.7G212800_v2.0.a1
pyrus_communis	pycom02g05940 pycom15g18120
rosa_chinensis	RchiOBHm_Chr2g0093011
rosa_laevigata	RLG00000016359
rosa_multiflora	Rmu_sc0000965.1_g000023
rosa_roxburghii	Rroxscaffold_2G00148620
rosa_rugosa	Rorug02G0031500
rosa_samantha	Rh2AG077200 Rh2BG078600 Rh2CG080800 Rh2DG076000
rosa_wichuraiana	Rw2G006900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1334
AccB1I	GGYRCC	1 cut(s)	377
AccBSI	CCGCTC	2 cut(s)	289, 781
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	4 cut(s)	754, 777, 1129, 1228
AclWI	GGATC	2 cut(s)	634, 1181
AcsI	RAATTY	2 cut(s)	871, 1131
AcyI	GRCGYC	1 cut(s)	378
AfaI	GTAC	5 cut(s)	392, 993, 1291, 1371, 1456
AjnI	CCWGG	1 cut(s)	1463
AjuI	GAANNNNNNNTTGG	6 cut(s)	695, 727, 863, 895, 1223, 1255
AloI	GAACNNNNNNTCC	2 cut(s)	1586, 1618
AluBI	AGCT	5 cut(s)	208, 938, 1246, 1555, 1633
AluI	AGCT	5 cut(s)	208, 938, 1246, 1555, 1633
Alw26I	GTCTC	1 cut(s)	664
AlwI	GGATC	2 cut(s)	634, 1181
Ama87I	CYCGRG	1 cut(s)	180
AoxI	GGCC	2 cut(s)	138, 1197
ApaI	GGGCCC	1 cut(s)	142
ApoI	RAATTY	2 cut(s)	871, 1131
ArsI	GACNNNNNNTTYG	2 cut(s)	168, 200
AspLEI	GCGC	8 cut(s)	314, 380, 485, 754, 756, 777, 958, 1129
AspS9I	GGNCC	4 cut(s)	138, 139, 423, 655
AsuC2I	CCSGG	3 cut(s)	169, 181, 182
AsuHPI	GGTGA	3 cut(s)	848, 1289, 1517
AsuII	TTCGAA	1 cut(s)	1495
AvaI	CYCGRG	1 cut(s)	180
AvaII	GGWCC	2 cut(s)	423, 655
BaeGI	GKGCMC	1 cut(s)	142
BanI	GGYRCC	1 cut(s)	377
BanII	GRGCYC	1 cut(s)	142
BauI	CACGAG	1 cut(s)	659
BccI	CCATC	4 cut(s)	50, 617, 1589, 1590
BceAI	ACGGC	3 cut(s)	287, 361, 664
BciT130I	CCWGG	1 cut(s)	1465
BciVI	GTATCC	1 cut(s)	1351
BclI	TGATCA	2 cut(s)	807, 1449
BcnI	CCSGG	3 cut(s)	169, 181, 182
BcoDI	GTCTC	1 cut(s)	664
BfaI	CTAG	2 cut(s)	927, 1151
BfmI	CTRYAG	2 cut(s)	939, 1092
BfoI	RGCGCY	3 cut(s)	315, 381, 486
BfuAI	ACCTGC	1 cut(s)	1334
BfuI	GTATCC	1 cut(s)	1351
BisI	GCNGC	3 cut(s)	273, 334, 337
BlsI	GCNGC	3 cut(s)	274, 335, 338
BmcAI	AGTACT	1 cut(s)	1456
Bme1390I	CCNGG	4 cut(s)	169, 181, 182, 1465
Bme18I	GGWCC	2 cut(s)	423, 655
BmeT110I	CYCGRG	1 cut(s)	180
BmgT120I	GGNCC	4 cut(s)	138, 139, 423, 655
BmiI	GGNNCC	7 cut(s)	114, 140, 141, 379, 425, 885, 1580
BmrFI	CCNGG	4 cut(s)	169, 181, 182, 1465
BmrI	ACTGGG	2 cut(s)	382, 822
BmsI	GCATC	4 cut(s)	510, 739, 837, 1224
BmuI	ACTGGG	2 cut(s)	382, 822
BpmI	CTGGAG	1 cut(s)	1443
Bpu14I	TTCGAA	1 cut(s)	1495
BpuEI	CTTGAG	2 cut(s)	659, 1277
BpuMI	CCSGG	3 cut(s)	169, 181, 182
Bsa29I	ATCGAT	1 cut(s)	1383
BsaAI	YACGTR	2 cut(s)	494, 1369
BsaBI	GATNNNNATC	1 cut(s)	1526
BsaHI	GRCGYC	1 cut(s)	378
BsaJI	CCNNGG	4 cut(s)	108, 134, 180, 1226
BsaWI	WCCGGW	2 cut(s)	146, 994
BsaXI	ACNNNNNCTCC	6 cut(s)	97, 127, 775, 805, 1157, 1187
Bse1I	ACTGG	3 cut(s)	82, 388, 817
Bse3DI	GCAATG	2 cut(s)	1217, 1406
Bse8I	GATNNNNATC	1 cut(s)	1526
BseBI	CCWGG	1 cut(s)	1465
BseCI	ATCGAT	1 cut(s)	1383
BseDI	CCNNGG	4 cut(s)	108, 134, 180, 1226
BseGI	GGATG	3 cut(s)	296, 852, 1600
BseJI	GATNNNNATC	1 cut(s)	1526
BseMI	GCAATG	2 cut(s)	1217, 1406
BseMII	CTCAG	1 cut(s)	1466
BseNI	ACTGG	3 cut(s)	82, 388, 817
BsePI	GCGCGC	1 cut(s)	752
BseRI	GAGGAG	4 cut(s)	105, 548, 1076, 1274
BseSI	GKGCMC	1 cut(s)	142
BseYI	CCCAGC	2 cut(s)	308, 426
BsgI	GTGCAG	2 cut(s)	182, 277
Bsh1236I	CGCG	4 cut(s)	754, 777, 1129, 1228
BshFI	GGCC	2 cut(s)	140, 1199
BshNI	GGYRCC	1 cut(s)	377
BshVI	ATCGAT	1 cut(s)	1383
BsiHKCI	CYCGRG	1 cut(s)	180
BsiSI	CCGG	6 cut(s)	147, 169, 181, 887, 995, 1355
BslFI	GGGAC	1 cut(s)	290
BsmAI	GTCTC	1 cut(s)	664
BsmFI	GGGAC	1 cut(s)	290
BsmI	GAATGC	3 cut(s)	777, 799, 1617
BsnI	GGCC	2 cut(s)	140, 1199
BsoBI	CYCGRG	1 cut(s)	180
Bsp119I	TTCGAA	1 cut(s)	1495
Bsp120I	GGGCCC	1 cut(s)	138
Bsp1286I	GDGCHC	1 cut(s)	142
Bsp143I	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
Bsp19I	CCATGG	1 cut(s)	108
BspANI	GGCC	2 cut(s)	140, 1199
BspCNI	CTCAG	1 cut(s)	1467
BspDI	ATCGAT	1 cut(s)	1383
BspFNI	CGCG	4 cut(s)	754, 777, 1129, 1228
BspHI	TCATGA	2 cut(s)	666, 1375
BspLI	GGNNCC	7 cut(s)	114, 140, 141, 379, 425, 885, 1580
BspMI	ACCTGC	1 cut(s)	1334
BspPI	GGATC	2 cut(s)	634, 1181
BspQI	GCTCTTC	2 cut(s)	355, 965
BspT104I	TTCGAA	1 cut(s)	1495
BspT107I	GGYRCC	1 cut(s)	377
BsrBI	CCGCTC	2 cut(s)	289, 781
BsrDI	GCAATG	2 cut(s)	1217, 1406
BsrI	ACTGG	3 cut(s)	82, 388, 817
BssECI	CCNNGG	4 cut(s)	108, 134, 180, 1226
BssHII	GCGCGC	1 cut(s)	752
BssMI	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
BssNI	GRCGYC	1 cut(s)	378
BssSI	CACGAG	1 cut(s)	659
BssT1I	CCWWGG	2 cut(s)	108, 134
Bst2BI	CACGAG	1 cut(s)	659
Bst2UI	CCWGG	1 cut(s)	1465
Bst4CI	ACNGT	2 cut(s)	675, 1096
Bst6I	CTCTTC	4 cut(s)	70, 132, 355, 965
BstACI	GRCGYC	1 cut(s)	378
BstAPI	GCANNNNNTGC	1 cut(s)	1408
BstBAI	YACGTR	2 cut(s)	494, 1369
BstBI	TTCGAA	1 cut(s)	1495
BstC8I	GCNNGC	4 cut(s)	754, 779, 1404, 1424
BstDEI	CTNAG	3 cut(s)	1115, 1194, 1475
BstDSI	CCRYGG	2 cut(s)	108, 1226
BstF5I	GGATG	3 cut(s)	296, 852, 1600
BstFNI	CGCG	4 cut(s)	754, 777, 1129, 1228
BstH2I	RGCGCY	3 cut(s)	315, 381, 486
BstHHI	GCGC	8 cut(s)	314, 380, 485, 754, 756, 777, 958, 1129
BstKTI	GATC	7 cut(s)	629, 810, 1159, 1189, 1387, 1452, 1560
BstMAI	GTCTC	1 cut(s)	664
BstMBI	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
BstNI	CCWGG	1 cut(s)	1465
BstNSI	RCATGY	1 cut(s)	1255
BstSCI	CCNGG	4 cut(s)	167, 179, 180, 1463
BstSFI	CTRYAG	2 cut(s)	939, 1092
BstSLI	GKGCMC	1 cut(s)	142
BstSNI	TACGTA	2 cut(s)	494, 1369
BstUI	CGCG	4 cut(s)	754, 777, 1129, 1228
BstXI	CCANNNNNNTGG	1 cut(s)	109
Bsu15I	ATCGAT	1 cut(s)	1383
BsuI	GTATCC	1 cut(s)	1351
BsuRI	GGCC	2 cut(s)	140, 1199
BsuTUI	ATCGAT	1 cut(s)	1383
BtgI	CCRYGG	2 cut(s)	108, 1226
BtsCI	GGATG	3 cut(s)	296, 852, 1600
BtsI	GCAGTG	1 cut(s)	828
BtsIMutI	CAGTG	3 cut(s)	75, 810, 828
BveI	ACCTGC	1 cut(s)	1334
Cac8I	GCNNGC	4 cut(s)	754, 779, 1404, 1424
CciI	TCATGA	2 cut(s)	666, 1375
CfoI	GCGC	8 cut(s)	314, 380, 485, 754, 756, 777, 958, 1129
Cfr13I	GGNCC	4 cut(s)	138, 139, 423, 655
Cfr42I	CCGCGG	1 cut(s)	1229
Cfr9I	CCCGGG	1 cut(s)	180
ClaI	ATCGAT	1 cut(s)	1383
Csp6I	GTAC	5 cut(s)	391, 992, 1290, 1370, 1455
CspCI	CAANNNNNGTGG	2 cut(s)	492, 527
CviAII	CATG	6 cut(s)	109, 667, 1136, 1252, 1376, 1531
CviQI	GTAC	5 cut(s)	391, 992, 1290, 1370, 1455
DdeI	CTNAG	3 cut(s)	1115, 1194, 1475
DinI	GGCGCC	1 cut(s)	379
DpnI	GATC	7 cut(s)	628, 809, 1158, 1188, 1386, 1451, 1559
DpnII	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
Eam1104I	CTCTTC	4 cut(s)	70, 132, 355, 965
EarI	CTCTTC	4 cut(s)	70, 132, 355, 965
EciI	GGCGGA	5 cut(s)	289, 320, 345, 571, 1595
Eco105I	TACGTA	2 cut(s)	494, 1369
Eco130I	CCWWGG	2 cut(s)	108, 134
Eco24I	GRGCYC	1 cut(s)	142
Eco47I	GGWCC	2 cut(s)	423, 655
Eco88I	CYCGRG	1 cut(s)	180
EcoO109I	RGGNCCY	3 cut(s)	138, 139, 423
EcoRI	GAATTC	2 cut(s)	871, 1131
EcoRII	CCWGG	1 cut(s)	1463
EcoT14I	CCWWGG	2 cut(s)	108, 134
EcoT38I	GRGCYC	1 cut(s)	142
EgeI	GGCGCC	1 cut(s)	379
EheI	GGCGCC	1 cut(s)	379
ErhI	CCWWGG	2 cut(s)	108, 134
FaeI	CATG	6 cut(s)	112, 670, 1139, 1255, 1379, 1534
FalI	AAGNNNNNCTT	2 cut(s)	1223, 1255
FaqI	GGGAC	1 cut(s)	290
FatI	CATG	6 cut(s)	108, 666, 1135, 1251, 1375, 1530
FauI	CCCGC	1 cut(s)	294
FbaI	TGATCA	2 cut(s)	807, 1449
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	3 cut(s)	273, 334, 337
FokI	GGATG	3 cut(s)	283, 859, 1607
FriOI	GRGCYC	1 cut(s)	142
Fsp4HI	GCNGC	3 cut(s)	273, 334, 337
FspBI	CTAG	2 cut(s)	927, 1151
GlaI	GCGC	8 cut(s)	313, 379, 484, 753, 755, 776, 957, 1128
GluI	GCNGC	3 cut(s)	273, 334, 337
GsaI	CCCAGC	2 cut(s)	312, 430
GsuI	CTGGAG	1 cut(s)	1443
HaeII	RGCGCY	3 cut(s)	315, 381, 486
HaeIII	GGCC	2 cut(s)	140, 1199
HapII	CCGG	6 cut(s)	147, 169, 181, 887, 995, 1355
HhaI	GCGC	8 cut(s)	314, 380, 485, 754, 756, 777, 958, 1129
Hin1I	GRCGYC	1 cut(s)	378
Hin1II	CATG	6 cut(s)	112, 670, 1139, 1255, 1379, 1534
Hin6I	GCGC	8 cut(s)	312, 378, 483, 752, 754, 775, 956, 1127
HinP1I	GCGC	8 cut(s)	312, 378, 483, 752, 754, 775, 956, 1127
HincII	GTYRAC	2 cut(s)	187, 451
HindII	GTYRAC	2 cut(s)	187, 451
HindIII	AAGCTT	1 cut(s)	1631
HinfI	GANTC	7 cut(s)	193, 327, 461, 614, 1489, 1497, 1654
HpaII	CCGG	6 cut(s)	147, 169, 181, 887, 995, 1355
HphI	GGTGA	3 cut(s)	848, 1289, 1517
Hpy166II	GTNNAC	3 cut(s)	187, 451, 658
Hpy188I	TCNGA	4 cut(s)	548, 1287, 1449, 1476
Hpy188III	TCNNGA	4 cut(s)	667, 1376, 1388, 1627
Hpy8I	GTNNAC	3 cut(s)	187, 451, 658
HpyAV	CCTTC	6 cut(s)	70, 261, 274, 646, 941, 1200
HpyCH4III	ACNGT	2 cut(s)	675, 1096
HpyCH4IV	ACGT	2 cut(s)	493, 1368
HpyCH4V	TGCA	6 cut(s)	6, 199, 294, 821, 1237, 1411
HpyF3I	CTNAG	3 cut(s)	1115, 1194, 1475
HpySE526I	ACGT	2 cut(s)	493, 1368
Hsp92I	GRCGYC	1 cut(s)	378
Hsp92II	CATG	6 cut(s)	112, 670, 1139, 1255, 1379, 1534
HspAI	GCGC	8 cut(s)	312, 378, 483, 752, 754, 775, 956, 1127
KasI	GGCGCC	1 cut(s)	377
Ksp22I	TGATCA	2 cut(s)	807, 1449
KspI	CCGCGG	1 cut(s)	1229
Kzo9I	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
LguI	GCTCTTC	2 cut(s)	355, 965
LmnI	GCTCC	5 cut(s)	118, 783, 883, 1243, 1552
LweI	GCATC	4 cut(s)	510, 739, 837, 1224
MaeI	CTAG	2 cut(s)	927, 1151
MaeII	ACGT	2 cut(s)	493, 1368
MaeIII	GTNAC	2 cut(s)	836, 1505
MalI	GATC	7 cut(s)	628, 809, 1158, 1188, 1386, 1451, 1559
MbiI	CCGCTC	2 cut(s)	289, 781
MboI	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
MfeI	CAATTG	2 cut(s)	1434, 1643
MhlI	GDGCHC	1 cut(s)	142
Mly113I	GGCGCC	1 cut(s)	378
MlyI	GAGTC	1 cut(s)	336
MmeI	TCCRAC	4 cut(s)	271, 526, 537, 861
MseI	TTAA	4 cut(s)	1179, 1248, 1485, 1617
MslI	CAYNNNNRTG	2 cut(s)	107, 1050
MspA1I	CMGCKG	1 cut(s)	1228
MspI	CCGG	6 cut(s)	147, 169, 181, 887, 995, 1355
MspR9I	CCNGG	4 cut(s)	169, 181, 182, 1465
MunI	CAATTG	2 cut(s)	1434, 1643
Mva1269I	GAATGC	3 cut(s)	777, 799, 1617
MvaI	CCWGG	1 cut(s)	1465
MvnI	CGCG	4 cut(s)	754, 777, 1129, 1228
NarI	GGCGCC	1 cut(s)	378
NciI	CCSGG	3 cut(s)	169, 181, 182
NcoI	CCATGG	1 cut(s)	108
NdeII	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
NlaIII	CATG	6 cut(s)	112, 670, 1139, 1255, 1379, 1534
NlaIV	GGNNCC	7 cut(s)	114, 140, 141, 379, 425, 885, 1580
NmuCI	GTSAC	2 cut(s)	836, 1505
NspI	RCATGY	1 cut(s)	1255
NspV	TTCGAA	1 cut(s)	1495
PagI	TCATGA	2 cut(s)	666, 1375
PauI	GCGCGC	1 cut(s)	752
PciSI	GCTCTTC	2 cut(s)	355, 965
PctI	GAATGC	3 cut(s)	777, 799, 1617
PfeI	GAWTC	6 cut(s)	193, 461, 614, 1489, 1497, 1654
PkrI	GCNGC	3 cut(s)	274, 335, 338
PleI	GAGTC	1 cut(s)	335
PluTI	GGCGCC	1 cut(s)	381
PpsI	GAGTC	1 cut(s)	335
Ppu21I	YACGTR	2 cut(s)	494, 1369
PpuMI	RGGWCCY	1 cut(s)	423
Psp5II	RGGWCCY	1 cut(s)	423
Psp6I	CCWGG	1 cut(s)	1463
PspFI	CCCAGC	2 cut(s)	308, 426
PspGI	CCWGG	1 cut(s)	1463
PspN4I	GGNNCC	7 cut(s)	114, 140, 141, 379, 425, 885, 1580
PspOMI	GGGCCC	1 cut(s)	138
PspPI	GGNCC	4 cut(s)	138, 139, 423, 655
PspPPI	RGGWCCY	1 cut(s)	423
PteI	GCGCGC	1 cut(s)	752
RsaI	GTAC	5 cut(s)	392, 993, 1291, 1371, 1456
RsaNI	GTAC	5 cut(s)	391, 992, 1290, 1370, 1455
RseI	CAYNNNNRTG	2 cut(s)	107, 1050
SacII	CCGCGG	1 cut(s)	1229
SalI	GTCGAC	1 cut(s)	185
SapI	GCTCTTC	2 cut(s)	355, 965
SaqAI	TTAA	4 cut(s)	1179, 1248, 1485, 1617
SatI	GCNGC	3 cut(s)	273, 334, 337
Sau3AI	GATC	7 cut(s)	626, 807, 1156, 1186, 1384, 1449, 1557
Sau96I	GGNCC	4 cut(s)	138, 139, 423, 655
ScaI	AGTACT	1 cut(s)	1456
SchI	GAGTC	1 cut(s)	336
ScrFI	CCNGG	4 cut(s)	169, 181, 182, 1465
SduI	GDGCHC	1 cut(s)	142
SfaNI	GCATC	4 cut(s)	510, 739, 837, 1224
SfcI	CTRYAG	2 cut(s)	939, 1092
SfoI	GGCGCC	1 cut(s)	379
Sfr303I	CCGCGG	1 cut(s)	1229
SfuI	TTCGAA	1 cut(s)	1495
SgrBI	CCGCGG	1 cut(s)	1229
SinI	GGWCC	2 cut(s)	423, 655
SmaI	CCCGGG	1 cut(s)	182
SmiMI	CAYNNNNRTG	2 cut(s)	107, 1050
SmlI	CTYRAG	2 cut(s)	638, 1256
SmoI	CTYRAG	2 cut(s)	638, 1256
SnaBI	TACGTA	2 cut(s)	494, 1369
SspDI	GGCGCC	1 cut(s)	377
SspI	AATATT	1 cut(s)	1183
SspMI	CTAG	2 cut(s)	927, 1151
StyD4I	CCNGG	4 cut(s)	167, 179, 180, 1463
StyI	CCWWGG	2 cut(s)	108, 134
TaaI	ACNGT	2 cut(s)	675, 1096
TaiI	ACGT	2 cut(s)	496, 1371
TatI	WGTACW	3 cut(s)	390, 1289, 1454
TauI	GCSGC	3 cut(s)	275, 336, 339
TfiI	GAWTC	6 cut(s)	193, 461, 614, 1489, 1497, 1654
Tru1I	TTAA	4 cut(s)	1179, 1248, 1485, 1617
Tru9I	TTAA	4 cut(s)	1179, 1248, 1485, 1617
TscAI	CASTG	3 cut(s)	82, 817, 828
TseFI	GTSAC	2 cut(s)	836, 1505
Tsp45I	GTSAC	2 cut(s)	836, 1505
TspGWI	ACGGA	2 cut(s)	223, 606
TspMI	CCCGGG	1 cut(s)	180
TspRI	CASTG	3 cut(s)	82, 817, 828
VpaK11BI	GGWCC	2 cut(s)	423, 655
XapI	RAATTY	2 cut(s)	871, 1131
XceI	RCATGY	1 cut(s)	1255
XcmI	CCANNNNNNNNNTGG	1 cut(s)	106
XmaI	CCCGGG	1 cut(s)	180
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	2 cut(s)	927, 1151
ZrmI	AGTACT	1 cut(s)	1456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.