Transmembrane family 220, helix
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G23755 |
| fragaria_vesca | FvH4_1g14340 FvH4_1g14340 FvH4_1g14340 |
| malus_domestica | MD15G1271500.v1.1 |
| prunus_persica | Prupe.7G146700_v2.0.a1 Prupe.7G146700_v2.0.a1 |
| pyrus_communis | pycom15g23550 |
| rosa_chinensis | RchiOBHm_Chr2g0103011 |
| rosa_laevigata | RLG00000017200 |
| rosa_multiflora | Rmu_sc0000388.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00140000 |
| rosa_rugosa | Rorug02G0111400 |
| rosa_samantha | Rh2AG159600 Rh2BG166100 Rh2CG166300 Rh2DG165000 |
| rosa_wichuraiana | Rw2G012470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 4 |
| AdeI | CACNNNGTG | 1 cut(s) | 57 |
| AfaI | GTAC | 1 cut(s) | 125 |
| AluBI | AGCT | 3 cut(s) | 106, 257, 386 |
| AluI | AGCT | 3 cut(s) | 106, 257, 386 |
| Alw21I | GWGCWC | 1 cut(s) | 62 |
| Alw26I | GTCTC | 2 cut(s) | 187, 285 |
| ApeKI | GCWGC | 3 cut(s) | 103, 215, 359 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| AspS9I | GGNCC | 1 cut(s) | 481 |
| AsuHPI | GGTGA | 1 cut(s) | 181 |
| AvaII | GGWCC | 1 cut(s) | 481 |
| BbsI | GAAGAC | 1 cut(s) | 463 |
| Bbv12I | GWGCWC | 1 cut(s) | 62 |
| BbvCI | CCTCAGC | 1 cut(s) | 210 |
| BbvI | GCAGC | 3 cut(s) | 115, 202, 371 |
| BcoDI | GTCTC | 2 cut(s) | 187, 285 |
| BfaI | CTAG | 1 cut(s) | 45 |
| BisI | GCNGC | 3 cut(s) | 104, 216, 360 |
| BlsI | GCNGC | 3 cut(s) | 105, 217, 361 |
| Bme18I | GGWCC | 1 cut(s) | 481 |
| BmgT120I | GGNCC | 1 cut(s) | 481 |
| BmsI | GCATC | 3 cut(s) | 83, 104, 371 |
| BpiI | GAAGAC | 1 cut(s) | 463 |
| Bpu10I | CCTNAGC | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 1 cut(s) | 145 |
| BseDI | CCNNGG | 1 cut(s) | 145 |
| BseGI | GGATG | 1 cut(s) | 185 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BseXI | GCAGC | 3 cut(s) | 115, 202, 371 |
| BsgI | GTGCAG | 2 cut(s) | 122, 201 |
| BsiHKAI | GWGCWC | 1 cut(s) | 62 |
| BsmAI | GTCTC | 2 cut(s) | 187, 285 |
| Bsp1286I | GDGCHC | 1 cut(s) | 62 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BssECI | CCNNGG | 1 cut(s) | 145 |
| BssT1I | CCWWGG | 1 cut(s) | 145 |
| Bst6I | CTCTTC | 1 cut(s) | 69 |
| BstDEI | CTNAG | 1 cut(s) | 210 |
| BstF5I | GGATG | 1 cut(s) | 185 |
| BstMAI | GTCTC | 2 cut(s) | 187, 285 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 92, 215, 263 |
| BstV1I | GCAGC | 3 cut(s) | 115, 202, 371 |
| BstV2I | GAAGAC | 1 cut(s) | 463 |
| BtsCI | GGATG | 1 cut(s) | 185 |
| Cfr13I | GGNCC | 1 cut(s) | 481 |
| Csp6I | GTAC | 1 cut(s) | 124 |
| CviAII | CATG | 1 cut(s) | 343 |
| CviJI | RGCY | 6 cut(s) | 106, 179, 215, 226, 257, 386 |
| CviKI_1 | RGCY | 6 cut(s) | 106, 179, 215, 226, 257, 386 |
| CviQI | GTAC | 1 cut(s) | 124 |
| DdeI | CTNAG | 1 cut(s) | 210 |
| DraIII | CACNNNGTG | 1 cut(s) | 57 |
| Eam1104I | CTCTTC | 1 cut(s) | 69 |
| EarI | CTCTTC | 1 cut(s) | 69 |
| Eco130I | CCWWGG | 1 cut(s) | 145 |
| Eco47I | GGWCC | 1 cut(s) | 481 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoT14I | CCWWGG | 1 cut(s) | 145 |
| ErhI | CCWWGG | 1 cut(s) | 145 |
| FaeI | CATG | 1 cut(s) | 346 |
| FaiI | YATR | 4 cut(s) | 29, 223, 344, 426 |
| FatI | CATG | 1 cut(s) | 342 |
| Fnu4HI | GCNGC | 3 cut(s) | 104, 216, 360 |
| FokI | GGATG | 1 cut(s) | 172 |
| Fsp4HI | GCNGC | 3 cut(s) | 104, 216, 360 |
| FspBI | CTAG | 1 cut(s) | 45 |
| GluI | GCNGC | 3 cut(s) | 104, 216, 360 |
| Hin1II | CATG | 1 cut(s) | 346 |
| HincII | GTYRAC | 1 cut(s) | 21 |
| HindII | GTYRAC | 1 cut(s) | 21 |
| HinfI | GANTC | 1 cut(s) | 447 |
| HphI | GGTGA | 1 cut(s) | 181 |
| Hpy166II | GTNNAC | 1 cut(s) | 21 |
| Hpy188III | TCNNGA | 1 cut(s) | 284 |
| Hpy8I | GTNNAC | 1 cut(s) | 21 |
| HpyAV | CCTTC | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 4 cut(s) | 95, 103, 218, 352 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 92, 215, 263 |
| HpyF3I | CTNAG | 1 cut(s) | 210 |
| Hsp92II | CATG | 1 cut(s) | 346 |
| LpnPI | CCDG | 4 cut(s) | 129, 152, 255, 269 |
| Lsp1109I | GCAGC | 3 cut(s) | 115, 202, 371 |
| LweI | GCATC | 3 cut(s) | 83, 104, 371 |
| MaeI | CTAG | 1 cut(s) | 45 |
| MaeIII | GTNAC | 2 cut(s) | 47, 250 |
| MboII | GAAGA | 3 cut(s) | 56, 363, 463 |
| MfeI | CAATTG | 1 cut(s) | 353 |
| MhlI | GDGCHC | 1 cut(s) | 62 |
| MluCI | AATT | 3 cut(s) | 4, 40, 353 |
| MmeI | TCCRAC | 1 cut(s) | 434 |
| MnlI | CCTC | 3 cut(s) | 19, 149, 205 |
| MseI | TTAA | 4 cut(s) | 33, 162, 290, 420 |
| MspA1I | CMGCKG | 1 cut(s) | 257 |
| MunI | CAATTG | 1 cut(s) | 353 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 92, 215, 263 |
| NlaIII | CATG | 1 cut(s) | 346 |
| NmuCI | GTSAC | 1 cut(s) | 250 |
| PfeI | GAWTC | 1 cut(s) | 447 |
| PkrI | GCNGC | 3 cut(s) | 105, 217, 361 |
| PspPI | GGNCC | 1 cut(s) | 481 |
| PvuII | CAGCTG | 1 cut(s) | 257 |
| RsaI | GTAC | 1 cut(s) | 125 |
| RsaNI | GTAC | 1 cut(s) | 124 |
| SaqAI | TTAA | 4 cut(s) | 33, 162, 290, 420 |
| SatI | GCNGC | 3 cut(s) | 104, 216, 360 |
| Sau96I | GGNCC | 1 cut(s) | 481 |
| SduI | GDGCHC | 1 cut(s) | 62 |
| SetI | ASST | 5 cut(s) | 108, 147, 259, 388, 492 |
| SfaNI | GCATC | 3 cut(s) | 83, 104, 371 |
| SinI | GGWCC | 1 cut(s) | 481 |
| Sse9I | AATT | 3 cut(s) | 4, 40, 353 |
| SspI | AATATT | 1 cut(s) | 234 |
| SspMI | CTAG | 1 cut(s) | 45 |
| StyI | CCWWGG | 1 cut(s) | 145 |
| TaqI | TCGA | 1 cut(s) | 11 |
| TasI | AATT | 3 cut(s) | 4, 40, 353 |
| TfiI | GAWTC | 1 cut(s) | 447 |
| Tru1I | TTAA | 4 cut(s) | 33, 162, 290, 420 |
| Tru9I | TTAA | 4 cut(s) | 33, 162, 290, 420 |
| TseFI | GTSAC | 1 cut(s) | 250 |
| TseI | GCWGC | 3 cut(s) | 103, 215, 359 |
| Tsp45I | GTSAC | 1 cut(s) | 250 |
| TspDTI | ATGAA | 2 cut(s) | 17, 363 |
| VpaK11BI | GGWCC | 1 cut(s) | 481 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XspI | CTAG | 1 cut(s) | 45 |