Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011654

Physical Location & Seq

Genomic Coordinates Reverse (-)

20596281 .. 20599231

Gene Structure 2951 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGGAGAGCTATTTGCAAGAGTTCGGGGAAGTGAAGCCGAAGGGTTCGTCTGAAGAAACGTTGCAGAAATGGAGGAACCTTTGCAGCGTTGTCAAGAACCCGAAACGGCGGTTTCGCTTCACTGCCAATCTTTCCAAACGTTTCGAGGCTGCTGCTATGCGCCGTACCAATCAGGAGAAACTGAGGATTGCTGTTTTGGTTTCTAAAGCTGCATTTCAATTTATTCAAGGTGTGCAACCAAGCGACTACGTCGTACCCAAGGAAGTTACGGACGCAGGTTTTCACATTTGCGCTGAGGAACTGGGATCCATTGTTGAAGGCCACGATGTAAAGAAGCTAAAATTTCATGGCGGAGTAAGTGGCATCGCAGAAAAGATCTCCACATCAGTAAAAGATGGGCTTAACACCGAATCAGACTTGCACACTCGAAGACAGGAGATTTATGGAATCAATAAATTTACCGAGAGTGAGCAACGGGGTTTCTTGATATTTGTTTGGGAAGCCCTTCAGGATATGACTCTTATCATCCTCGGAGTGTGCGCATTCGTGTCTTTGGTAGTTGGGATAGCAATGGAAGGGTGGCCAGTTGGAGCACATGATGGACTTGGAATCGTTGCGAGTATCCTGTTGGTTGTTCTTGTAACAGCAACGAGTGATTACCGCCAATCGTTGCAATTCAAGGACTTGGACAAGGAGAAAAAGAAGATTGCGATGCAAGTAACAAGAAATGGATATAGGCAGAAAATGTCAATCTATGATTTACTGCCTGGCGATATTGTGCATCTTTCTATTGGAGACCAAGTGCCAGCAGATGGGCTATTCGTATCAGGATTTTCCGTGTTGATTGACGAATCAAGCTTAACTGGTGAGAGTGAGCCAATAATGGTGACTCCTGAAAACCCTTTTCTTCTTTCGGGGACTAAGGTCCAAGACGGGTCATGCAAGATGATGGTTACAACGGTTGGGATGAGAACCCAGTGGGGTAAATTGATGGCGACTCTGAGCGAAGGCGGAGATGATGAAACCCCCCTGCAGGTGAAGCTGAATGGAGTGGCAACCATTATTGGAAAGATAGGCCTTTTATTCGCCGTTGTGACTTTTGCAGTTATGGTGCAAGGATTGTTTAGTCGTAAACTGGCTGAGGGGACACACTGGAGCTGGAATGGAGATGATGCAATGCAGATGCTGGAATTCTTTGCTGTTGCAGTTACAATTGTTGTTGTTGCTGTCCCTGAGGGGTTGCCGCTGGCTGTGACATTGAGCCTTGCCTTTGCCATGAAGAAGATGATGAATGATAAAGCACTTGTTCGCCATCTGGCAGCTTGCGAGACTATGGGATCAGCCACAAATATTTGCAGTGACAAAACTGGGACGCTAACAACCAACCGCATGACCGTTGTAAAATCATGCATTTGCATGAATGTCAAGGAGGTGAGCAATCCCAATGAGGCCTCTAGCTTATTCTCTGATCTTCCGGAAACTGCTAAGAAACTTTTGCTAGAATCAATCTTTAACAACACTGGCGGAGAAGTTGTGGTTAACAAAGCTGGAAAGTATGAGCTGTTGGGAACACCTACAGATACTGCTTTGTTGAAACTTGGCTTGTCACTTGGTGGAAATTTCCAAGCAGCGGGACAAGCTTCTAAGCTTGTTAAAGTCGAGCCATTCAACTCAACGAAGAAACAGATGGGGGTAATCTTGGAGCTTCCCGAAGGAGGTCTGAGAGCGCACACCAAAGGTGCCTCAGAAATAGTTTTGGCCAGCTGCGACAAGGTGATTAACTCAAATGGCGATGTTGTTCCCCTTGATGAAGCATCCCTCAACCATCTCAAAGTTACTATTGAGCAATTTGCTTGCGAGGCTCTTAGAACTCTATGTCTTGCGTATACAGAACTAGAAACTGGTTTCTCTCCAGAGAATCCCATACCTGTTTCTGGTTTTACTTGTTTAGGAATTGTGGGAATTAAGGATCCTGTTCGTCCCGGTGTCAAGGAGTCTGTTGCAATTTGCCGTTCAGCTGGCATTACAGTAAGAATGGTTACTGGAGACAATATAAATACTGCAAAGGCTATCGCAAGAGAATGTGGGATTCTCACCGATGATGGCATAGCCATTGAAGGTCCGGAGTTCAGAGAGAAGAATCAGGAAGAATTGCTTTCTCTGATTCCTAAAATTCAGGTGATGGCTCGATCTTCACCTCTTGACAAGCATACATTGGTGCAGCACTTGCGGACCACATTTGATGAAGTTGTTGCTGTCACCGGTGATGGAACAAACGATGCCCCAGCGCTTCACGAGGCAGATATTGGACTAGCCATGGGGATTGCTGGAACTGAGGTGAGTGGCCAAAGAGAGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007275 GO:0008150 GO:0008324 GO:0009555 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042175 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098827 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CaATP_NAI Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

787

Amino Acids

84.91

Weight (kDa)

5.65

Isoelectric Point (pI)

33.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CaATP_NAI	PF12515	6 - 49	1.8e-19	Ca2+-ATPase N terminal autoinhibitory domain
Cation_ATPase_N	PF00690	116 - 184	3.3e-10	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	237 - 333	1.7e-21	P-type ATPase actuator domain
Cation_ATPase	PF13246	497 - 661	1.1e-31	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	648 - 768	8.3e-12	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22950 AT4G37640
fragaria_vesca	FvH4_1g17620
malus_domestica	MD02G1185000.v1.1 MD15G1296400.v1.1
prunus_persica	Prupe.6G221800_v2.0.a1 Prupe.6G221800_v2.0.a1
pyrus_communis	pycom02g14990 pycom15g25970
rosa_chinensis	RchiOBHm_Chr2g0107911
rosa_laevigata	RLG00000017627
rosa_multiflora	Rmu_sc0001484.1_g000032
rosa_roxburghii	Rroxscaffold_2G00135800
rosa_rugosa	Rorug02G0148700 Rorug02G0148800 Rorug02G0148800
rosa_samantha	Rh2BG210900 Rh2CG202700
rosa_wichuraiana	Rw2G015710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1024
Acc16I	TGCGCA	1 cut(s)	541
Acc36I	ACCTGC	2 cut(s)	266, 1024
AccB1I	GGYRCC	1 cut(s)	1739
AccB7I	CCANNNNNTGG	1 cut(s)	812
AccI	GTMKAC	1 cut(s)	1886
AccIII	TCCGGA	2 cut(s)	1474, 2122
AciI	CCGC	9 cut(s)	109, 351, 661, 1011, 1244, 1387, 1524, 1631, 2230
AclI	AACGTT	2 cut(s)	59, 139
AclWI	GGATC	5 cut(s)	300, 313, 1345, 1964, 1977
AcoI	YGGCCR	3 cut(s)	581, 1758, 2344
AcsI	RAATTY	5 cut(s)	341, 455, 1190, 1618, 2172
AcuI	CTGAAG	2 cut(s)	72, 491
AdeI	CACNNNGTG	1 cut(s)	1613
AfaI	GTAC	2 cut(s)	166, 255
AfeI	AGCGCT	1 cut(s)	2289
AfiI	CCNNNNNNNGG	5 cut(s)	812, 1033, 1630, 1715, 1934
AgeI	ACCGGT	1 cut(s)	2261
AgsI	TTSAA	7 cut(s)	218, 227, 317, 679, 1594, 1669, 2117
AjnI	CCWGG	1 cut(s)	766
Alw21I	GWGCWC	1 cut(s)	595
Alw26I	GTCTC	3 cut(s)	789, 1322, 2040
AlwI	GGATC	5 cut(s)	300, 313, 1345, 1964, 1977
AlwNI	CAGNNNCTG	2 cut(s)	1186, 1583
Aor13HI	TCCGGA	2 cut(s)	1474, 2122
Aor51HI	AGCGCT	1 cut(s)	2289
AoxI	GGCC	6 cut(s)	319, 581, 1075, 1449, 1758, 2344
ApeKI	GCWGC	8 cut(s)	84, 149, 152, 209, 1319, 1628, 1764, 2221
ApoI	RAATTY	5 cut(s)	341, 455, 1190, 1618, 2172
ArsI	GACNNNNNNTTYG	2 cut(s)	32, 64
AsiGI	ACCGGT	1 cut(s)	2261
Asp700I	GAANNNNTTC	1 cut(s)	504
AspLEI	GCGC	5 cut(s)	162, 293, 542, 1729, 2290
AspS9I	GGNCC	3 cut(s)	925, 2120, 2232
AsuC2I	CCSGG	1 cut(s)	1983
AvaII	GGWCC	3 cut(s)	925, 2120, 2232
AxyI	CCTNAGG	1 cut(s)	1233
BalI	TGGCCA	3 cut(s)	583, 1760, 2346
BamHI	GGATCC	2 cut(s)	305, 1969
BanI	GGYRCC	1 cut(s)	1739
BauI	CACGAG	1 cut(s)	2294
BbsI	GAAGAC	1 cut(s)	436
Bbv12I	GWGCWC	1 cut(s)	595
BbvCI	CCTCAGC	2 cut(s)	294, 1140
BbvI	GCAGC	8 cut(s)	96, 136, 139, 196, 1331, 1640, 1751, 2233
BceAI	ACGGC	4 cut(s)	122, 147, 1073, 1995
BcgI	CGANNNNNNTGC	2 cut(s)	134, 168
BciT130I	CCWGG	1 cut(s)	768
BciVI	GTATCC	1 cut(s)	632
BcnI	CCSGG	1 cut(s)	1983
BcoDI	GTCTC	3 cut(s)	789, 1322, 2040
BfaI	CTAG	4 cut(s)	1455, 1499, 1895, 2312
BfmI	CTRYAG	2 cut(s)	1031, 1575
BfoI	RGCGCY	1 cut(s)	2291
BfuAI	ACCTGC	2 cut(s)	266, 1024
BfuI	GTATCC	1 cut(s)	632
BglII	AGATCT	1 cut(s)	375
BisI	GCNGC	9 cut(s)	85, 150, 153, 210, 1244, 1320, 1629, 1765, 2222
BlsI	GCNGC	9 cut(s)	86, 151, 154, 211, 1245, 1321, 1630, 1766, 2223
Bme1390I	CCNGG	2 cut(s)	768, 1983
Bme18I	GGWCC	3 cut(s)	925, 2120, 2232
BmgT120I	GGNCC	3 cut(s)	925, 2120, 2232
BmiI	GGNNCC	4 cut(s)	77, 307, 1741, 1971
BmrFI	CCNGG	2 cut(s)	768, 1983
BmrI	ACTGGG	3 cut(s)	311, 970, 1377
BmsI	GCATC	7 cut(s)	372, 702, 790, 1162, 1173, 1823, 2269
BmuI	ACTGGG	3 cut(s)	311, 970, 1377
BoxI	GACNNNNGTC	1 cut(s)	923
BpiI	GAAGAC	1 cut(s)	436
BpmI	CTGGAG	3 cut(s)	1174, 1896, 2064
Bpu10I	CCTNAGC	2 cut(s)	294, 1140
BpuMI	CCSGG	1 cut(s)	1983
BsaI	GGTCTC	1 cut(s)	789
BsaJI	CCNNGG	3 cut(s)	258, 529, 2316
BsaWI	WCCGGW	3 cut(s)	1474, 2122, 2261
BsaXI	ACNNNNNCTCC	4 cut(s)	786, 816, 1518, 1548
Bsc4I	CCNNNNNNNGG	5 cut(s)	812, 1033, 1630, 1715, 1934
Bse118I	RCCGGY	1 cut(s)	2261
Bse21I	CCTNAGG	1 cut(s)	1233
Bse3DI	GCAATG	2 cut(s)	576, 1182
BseAI	TCCGGA	2 cut(s)	1474, 2122
BseBI	CCWGG	1 cut(s)	768
BseDI	CCNNGG	3 cut(s)	258, 529, 2316
BseGI	GGATG	3 cut(s)	525, 972, 1814
BseLI	CCNNNNNNNGG	5 cut(s)	812, 1033, 1630, 1715, 1934
BseMI	GCAATG	2 cut(s)	576, 1182
BseMII	CTCAG	8 cut(s)	173, 285, 992, 1131, 1224, 1712, 1758, 2325
BseXI	GCAGC	8 cut(s)	96, 136, 139, 196, 1331, 1640, 1751, 2233
BseYI	CCCAGC	1 cut(s)	2284
BsgI	GTGCAG	1 cut(s)	2240
BshFI	GGCC	6 cut(s)	321, 583, 1077, 1451, 1760, 2346
BshNI	GGYRCC	1 cut(s)	1739
BshTI	ACCGGT	1 cut(s)	2261
BsiHKAI	GWGCWC	1 cut(s)	595
BsiSI	CCGG	4 cut(s)	1475, 1983, 2123, 2262
BslFI	GGGAC	6 cut(s)	931, 1159, 1214, 1384, 1647, 1965
BslI	CCNNNNNNNGG	5 cut(s)	812, 1033, 1630, 1715, 1934
BsmAI	GTCTC	3 cut(s)	789, 1322, 2040
BsmFI	GGGAC	6 cut(s)	931, 1159, 1214, 1384, 1647, 1965
BsmI	GAATGC	1 cut(s)	542
BsnI	GGCC	6 cut(s)	321, 583, 1077, 1451, 1760, 2346
Bso31I	GGTCTC	1 cut(s)	789
Bsp1286I	GDGCHC	1 cut(s)	595
Bsp13I	TCCGGA	2 cut(s)	1474, 2122
Bsp143I	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
Bsp19I	CCATGG	1 cut(s)	2316
BspACI	CCGC	9 cut(s)	109, 351, 661, 1011, 1244, 1387, 1524, 1631, 2230
BspANI	GGCC	6 cut(s)	321, 583, 1077, 1451, 1760, 2346
BspCNI	CTCAG	8 cut(s)	174, 286, 993, 1132, 1225, 1713, 1757, 2326
BspEI	TCCGGA	2 cut(s)	1474, 2122
BspLI	GGNNCC	4 cut(s)	77, 307, 1741, 1971
BspMAI	CTGCAG	1 cut(s)	1035
BspMI	ACCTGC	2 cut(s)	266, 1024
BspPI	GGATC	5 cut(s)	300, 313, 1345, 1964, 1977
BspT107I	GGYRCC	1 cut(s)	1739
BspTNI	GGTCTC	1 cut(s)	789
BsrDI	GCAATG	2 cut(s)	576, 1182
BsrFI	RCCGGY	1 cut(s)	2261
BssAI	RCCGGY	1 cut(s)	2261
BssECI	CCNNGG	3 cut(s)	258, 529, 2316
BssMI	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
BssNAI	GTATAC	1 cut(s)	1887
BssSI	CACGAG	1 cut(s)	2294
BssT1I	CCWWGG	2 cut(s)	258, 2316
Bst1107I	GTATAC	1 cut(s)	1887
Bst2BI	CACGAG	1 cut(s)	2294
Bst2UI	CCWGG	1 cut(s)	768
Bst4CI	ACNGT	3 cut(s)	961, 1396, 2029
BstAPI	GCANNNNNTGC	1 cut(s)	2227
BstC8I	GCNNGC	6 cut(s)	807, 1248, 1324, 1762, 1855, 2020
BstDSI	CCRYGG	1 cut(s)	2316
BstF5I	GGATG	3 cut(s)	525, 972, 1814
BstH2I	RGCGCY	1 cut(s)	2291
BstHHI	GCGC	5 cut(s)	162, 293, 542, 1729, 2290
BstKTI	GATC	6 cut(s)	308, 378, 1340, 1471, 1972, 2192
BstMAI	GTCTC	3 cut(s)	789, 1322, 2040
BstMBI	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
BstMWI	GCNNNNNNNGC	4 cut(s)	1039, 1637, 1859, 2227
BstNI	CCWGG	1 cut(s)	768
BstPAI	GACNNNNGTC	1 cut(s)	923
BstSCI	CCNGG	2 cut(s)	766, 1981
BstSFI	CTRYAG	2 cut(s)	1031, 1575
BstV1I	GCAGC	8 cut(s)	96, 136, 139, 196, 1331, 1640, 1751, 2233
BstV2I	GAAGAC	1 cut(s)	436
BstX2I	RGATCY	3 cut(s)	305, 375, 1969
BstYI	RGATCY	3 cut(s)	305, 375, 1969
BstZ17I	GTATAC	1 cut(s)	1887
Bsu36I	CCTNAGG	1 cut(s)	1233
BsuI	GTATCC	1 cut(s)	632
BsuRI	GGCC	6 cut(s)	321, 583, 1077, 1451, 1760, 2346
BtgI	CCRYGG	1 cut(s)	2316
BtgZI	GCGATG	3 cut(s)	349, 725, 1806
BtsCI	GGATG	3 cut(s)	525, 972, 1814
BtsI	GCAGTG	2 cut(s)	120, 1363
BtsIMutI	CAGTG	5 cut(s)	120, 983, 1150, 1363, 1518
BveI	ACCTGC	2 cut(s)	266, 1024
Cac8I	GCNNGC	6 cut(s)	807, 1248, 1324, 1762, 1855, 2020
CaiI	CAGNNNCTG	2 cut(s)	1186, 1583
CfoI	GCGC	5 cut(s)	162, 293, 542, 1729, 2290
Cfr10I	RCCGGY	1 cut(s)	2261
Cfr13I	GGNCC	3 cut(s)	925, 2120, 2232
CseI	GACGC	2 cut(s)	281, 1381
Csp6I	GTAC	2 cut(s)	165, 254
CspAI	ACCGGT	1 cut(s)	2261
CviAII	CATG	8 cut(s)	347, 596, 939, 1276, 1390, 1407, 1417, 2317
CviQI	GTAC	2 cut(s)	165, 254
DpnI	GATC	6 cut(s)	307, 377, 1339, 1470, 1971, 2191
DpnII	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
DraIII	CACNNNGTG	1 cut(s)	1613
EaeI	YGGCCR	3 cut(s)	581, 1758, 2344
EciI	GGCGGA	3 cut(s)	366, 1026, 1539
Eco130I	CCWWGG	2 cut(s)	258, 2316
Eco147I	AGGCCT	2 cut(s)	1077, 1451
Eco31I	GGTCTC	1 cut(s)	789
Eco47I	GGWCC	3 cut(s)	925, 2120, 2232
Eco47III	AGCGCT	1 cut(s)	2289
Eco57I	CTGAAG	2 cut(s)	72, 491
Eco81I	CCTNAGG	1 cut(s)	1233
EcoRI	GAATTC	1 cut(s)	1190
EcoRII	CCWGG	1 cut(s)	766
EcoT14I	CCWWGG	2 cut(s)	258, 2316
EcoT22I	ATGCAT	1 cut(s)	1412
ErhI	CCWWGG	2 cut(s)	258, 2316
FaeI	CATG	8 cut(s)	350, 599, 942, 1279, 1393, 1410, 1420, 2320
FalI	AAGNNNNNCTT	4 cut(s)	384, 416, 2139, 2171
FaqI	GGGAC	6 cut(s)	931, 1159, 1214, 1384, 1647, 1965
FatI	CATG	8 cut(s)	346, 595, 938, 1275, 1389, 1406, 1416, 2316
FauI	CCCGC	1 cut(s)	1624
FblI	GTMKAC	1 cut(s)	1886
Fnu4HI	GCNGC	9 cut(s)	85, 150, 153, 210, 1244, 1320, 1629, 1765, 2222
FokI	GGATG	3 cut(s)	512, 979, 1801
Fsp4HI	GCNGC	9 cut(s)	85, 150, 153, 210, 1244, 1320, 1629, 1765, 2222
FspAI	RTGCGCAY	1 cut(s)	541
FspBI	CTAG	4 cut(s)	1455, 1499, 1895, 2312
FspI	TGCGCA	1 cut(s)	541
GlaI	GCGC	5 cut(s)	161, 292, 541, 1728, 2289
GluI	GCNGC	9 cut(s)	85, 150, 153, 210, 1244, 1320, 1629, 1765, 2222
GsaI	CCCAGC	1 cut(s)	2288
GsuI	CTGGAG	3 cut(s)	1174, 1896, 2064
HaeII	RGCGCY	1 cut(s)	2291
HaeIII	GGCC	6 cut(s)	321, 583, 1077, 1451, 1760, 2346
HapII	CCGG	4 cut(s)	1475, 1983, 2123, 2262
HgaI	GACGC	2 cut(s)	281, 1381
HhaI	GCGC	5 cut(s)	162, 293, 542, 1729, 2290
Hin1II	CATG	8 cut(s)	350, 599, 942, 1279, 1393, 1410, 1420, 2320
Hin6I	GCGC	5 cut(s)	160, 291, 540, 1727, 2288
HinP1I	GCGC	5 cut(s)	160, 291, 540, 1727, 2288
HincII	GTYRAC	1 cut(s)	1540
HindII	GTYRAC	1 cut(s)	1540
HindIII	AAGCTT	3 cut(s)	856, 1638, 1646
HpaI	GTTAAC	1 cut(s)	1540
HpaII	CCGG	4 cut(s)	1475, 1983, 2123, 2262
Hpy166II	GTNNAC	3 cut(s)	1133, 1540, 1887
Hpy188I	TCNGA	9 cut(s)	52, 415, 533, 1002, 1468, 1722, 1747, 2132, 2163
Hpy8I	GTNNAC	3 cut(s)	1133, 1540, 1887
Hpy99I	CGWCG	1 cut(s)	254
HpyAV	CCTTC	7 cut(s)	34, 311, 515, 569, 1001, 1706, 2111
HpyCH4III	ACNGT	3 cut(s)	961, 1396, 2029
HpyCH4IV	ACGT	3 cut(s)	59, 139, 249
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1039, 1637, 1859, 2227
HpySE526I	ACGT	3 cut(s)	59, 139, 249
Hsp92II	CATG	8 cut(s)	350, 599, 942, 1279, 1393, 1410, 1420, 2320
HspAI	GCGC	5 cut(s)	160, 291, 540, 1727, 2288
Kpn2I	TCCGGA	2 cut(s)	1474, 2122
KspAI	GTTAAC	1 cut(s)	1540
Kzo9I	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
LmnI	GCTCC	3 cut(s)	590, 1155, 1702
Lsp1109I	GCAGC	8 cut(s)	96, 136, 139, 196, 1331, 1640, 1751, 2233
LweI	GCATC	7 cut(s)	372, 702, 790, 1162, 1173, 1823, 2269
MaeI	CTAG	4 cut(s)	1455, 1499, 1895, 2312
MaeII	ACGT	3 cut(s)	59, 139, 249
MalI	GATC	6 cut(s)	307, 377, 1339, 1470, 1971, 2191
MboI	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
MfeI	CAATTG	1 cut(s)	1212
MflI	RGATCY	3 cut(s)	305, 375, 1969
MhlI	GDGCHC	1 cut(s)	595
MlsI	TGGCCA	3 cut(s)	583, 1760, 2346
MluNI	TGGCCA	3 cut(s)	583, 1760, 2346
MlyI	GAGTC	4 cut(s)	511, 883, 991, 2003
MmeI	TCCRAC	1 cut(s)	568
Mox20I	TGGCCA	3 cut(s)	583, 1760, 2346
Mph1103I	ATGCAT	1 cut(s)	1412
MroI	TCCGGA	2 cut(s)	1474, 2122
MroXI	GAANNNNTTC	1 cut(s)	504
MscI	TGGCCA	3 cut(s)	583, 1760, 2346
MseI	TTAA	7 cut(s)	402, 860, 1512, 1539, 1653, 1779, 1965
MslI	CAYNNNNRTG	1 cut(s)	1415
Msp20I	TGGCCA	3 cut(s)	583, 1760, 2346
MspA1I	CMGCKG	4 cut(s)	1246, 1631, 1764, 2018
MspI	CCGG	4 cut(s)	1475, 1983, 2123, 2262
MspR9I	CCNGG	2 cut(s)	768, 1983
MunI	CAATTG	1 cut(s)	1212
Mva1269I	GAATGC	1 cut(s)	542
MvaI	CCWGG	1 cut(s)	768
MwoI	GCNNNNNNNGC	4 cut(s)	1039, 1637, 1859, 2227
NciI	CCSGG	1 cut(s)	1983
NcoI	CCATGG	1 cut(s)	2316
NdeII	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
NlaIII	CATG	8 cut(s)	350, 599, 942, 1279, 1393, 1410, 1420, 2320
NlaIV	GGNNCC	4 cut(s)	77, 307, 1741, 1971
NmuCI	GTSAC	6 cut(s)	886, 1093, 1252, 1358, 1605, 2257
NsbI	TGCGCA	1 cut(s)	541
NsiI	ATGCAT	1 cut(s)	1412
PaqCI	CACCTGC	1 cut(s)	1024
PceI	AGGCCT	2 cut(s)	1077, 1451
PctI	GAATGC	1 cut(s)	542
PdmI	GAANNNNTTC	1 cut(s)	504
PfeI	GAWTC	9 cut(s)	410, 447, 609, 851, 1502, 1918, 2089, 2140, 2164
PflFI	GACNNNGTC	1 cut(s)	248
PflMI	CCANNNNNTGG	1 cut(s)	812
PinAI	ACCGGT	1 cut(s)	2261
PkrI	GCNGC	9 cut(s)	86, 151, 154, 211, 1245, 1321, 1630, 1766, 2223
PleI	GAGTC	4 cut(s)	511, 883, 991, 2002
PpsI	GAGTC	4 cut(s)	511, 883, 991, 2002
PshAI	GACNNNNGTC	1 cut(s)	923
Psp1406I	AACGTT	2 cut(s)	59, 139
Psp6I	CCWGG	1 cut(s)	766
PspFI	CCCAGC	1 cut(s)	2284
PspGI	CCWGG	1 cut(s)	766
PspN4I	GGNNCC	4 cut(s)	77, 307, 1741, 1971
PspPI	GGNCC	3 cut(s)	925, 2120, 2232
PstI	CTGCAG	1 cut(s)	1035
PstNI	CAGNNNCTG	2 cut(s)	1186, 1583
PsuI	RGATCY	3 cut(s)	305, 375, 1969
PsyI	GACNNNGTC	1 cut(s)	248
PvuII	CAGCTG	2 cut(s)	1764, 2018
RsaI	GTAC	2 cut(s)	166, 255
RsaNI	GTAC	2 cut(s)	165, 254
RseI	CAYNNNNRTG	1 cut(s)	1415
SaqAI	TTAA	7 cut(s)	402, 860, 1512, 1539, 1653, 1779, 1965
SatI	GCNGC	9 cut(s)	85, 150, 153, 210, 1244, 1320, 1629, 1765, 2222
Sau3AI	GATC	6 cut(s)	305, 375, 1337, 1468, 1969, 2189
Sau96I	GGNCC	3 cut(s)	925, 2120, 2232
SbfI	CCTGCAGG	1 cut(s)	1035
SchI	GAGTC	4 cut(s)	511, 883, 991, 2003
ScrFI	CCNGG	2 cut(s)	768, 1983
SdaI	CCTGCAGG	1 cut(s)	1035
SduI	GDGCHC	1 cut(s)	595
SfaNI	GCATC	7 cut(s)	372, 702, 790, 1162, 1173, 1823, 2269
SfcI	CTRYAG	2 cut(s)	1031, 1575
SgrAI	CRCCGGYG	1 cut(s)	2261
SinI	GGWCC	3 cut(s)	925, 2120, 2232
SmiMI	CAYNNNNRTG	1 cut(s)	1415
Sse8387I	CCTGCAGG	1 cut(s)	1035
SseBI	AGGCCT	2 cut(s)	1077, 1451
SsiI	CCGC	9 cut(s)	109, 351, 661, 1011, 1244, 1387, 1524, 1631, 2230
SspI	AATATT	1 cut(s)	1351
SspMI	CTAG	4 cut(s)	1455, 1499, 1895, 2312
StuI	AGGCCT	2 cut(s)	1077, 1451
StyD4I	CCNGG	2 cut(s)	766, 1981
StyI	CCWWGG	2 cut(s)	258, 2316
TaaI	ACNGT	3 cut(s)	961, 1396, 2029
TaiI	ACGT	3 cut(s)	62, 142, 252
TaqI	TCGA	4 cut(s)	144, 427, 1659, 2188
TauI	GCSGC	1 cut(s)	1246
TfiI	GAWTC	9 cut(s)	410, 447, 609, 851, 1502, 1918, 2089, 2140, 2164
Tru1I	TTAA	7 cut(s)	402, 860, 1512, 1539, 1653, 1779, 1965
Tru9I	TTAA	7 cut(s)	402, 860, 1512, 1539, 1653, 1779, 1965
TscAI	CASTG	5 cut(s)	127, 983, 1157, 1363, 1525
TseFI	GTSAC	6 cut(s)	886, 1093, 1252, 1358, 1605, 2257
TseI	GCWGC	8 cut(s)	84, 149, 152, 209, 1319, 1628, 1764, 2221
Tsp45I	GTSAC	6 cut(s)	886, 1093, 1252, 1358, 1605, 2257
TspDTI	ATGAA	7 cut(s)	335, 1035, 1292, 1304, 1433, 1824, 2259
TspGWI	ACGGA	2 cut(s)	284, 826
TspRI	CASTG	5 cut(s)	127, 983, 1157, 1363, 1525
Tth111I	GACNNNGTC	1 cut(s)	248
Van91I	CCANNNNNTGG	1 cut(s)	812
VpaK11BI	GGWCC	3 cut(s)	925, 2120, 2232
XapI	RAATTY	5 cut(s)	341, 455, 1190, 1618, 2172
XmiI	GTMKAC	1 cut(s)	1886
XmnI	GAANNNNTTC	1 cut(s)	504
XspI	CTAG	4 cut(s)	1455, 1499, 1895, 2312
Zsp2I	ATGCAT	1 cut(s)	1412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.