pycom15g32930

Annexin D1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0014753
Physical Location & Seq
Reverse (-)
32234634 .. 32237014
2381 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 951 bp
ATGTCGACCCTAAGAGTCCCTCCACAAGTCCCTGCTGCATCCGAAGACTCTGAGCAACTCAAGAAAGCCTTCAAAGGATGGGGAACGAATGAGGACTTGGTTATATCCATCTTGGGGCATAGAAATGCCGCTCAAAGAAAGGCAATCCGGAAAACTTATGCAGATGCTTACGGAGAAGATCTCCTCAAGGAACTGGAAAAAGAACTTACAAGTGACTTTGAGAGGATTGTATGGCTTTGGACACTTGATCCTGCTGAACGCGATGCATTTTTAGCCAACGAAGCAACAAAGAAGTGGACTAAAAGCAATCAGGTTCTTGCAGAAATAGCCTGCAGTAGGTCTGCACATGAACTGCTTTCGGCAAGGCAGGCTTATCACTCTCGCTACAAGAAGTCTCTCGAAGAGGATGTTGCTCATCACACAACTGGGGACTTCCGCAAGCTTTTGGCCCCTCTTGTTAGCTCATACAGATATGAGGGAGATGAGGTGAACCTGGCACTGGCAAAATCCGAGGCTAAGCTACTCCATGAGAAGATCTCAGACAAAGCCTACAATGATGACGATATCATCAGGATTCTGGCTACGCGGAGCAAAGCACAGATCAATGCAACGCTCAATCACTACAAAAATGAATTCGGGAATGACATCAACAAGGATCTGAAAGCTGACCCCAAGGATGAGTACCTTGCAATACTAAGGGCCACGATAAAGTGCTTGGTCCGCCCTGAGAAATATTTTGAGAAGTCTCTTCGTCTGGCAATTAACAAACGAGGAACAGATGAAGGAGCTCTCACTAGAGTTGTCGCTACAAGGGCTGAGGTTGACATGATGATTATTAAGGACCTGTACCACAAGAGGAACAGTGTCCCTCTGGATCAGGCCATTAAAAAGGACACTACTGGAGATTATGAAAAAATGCTTCTGGCCCTGGTTGGACATGAGAATGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

317

Amino Acids

35.91

Weight (kDa)

7.73

Isoelectric Point (pI)

32.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Annexin PF00191 16 - 77 4.6e-20 Annexin
Annexin PF00191 88 - 150 3.1e-16 Annexin
Annexin PF00191 171 - 228 2.8e-13 Annexin
Annexin PF00191 245 - 310 2.8e-16 Annexin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014753)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g37610
malus_domestica MD08G1182000.v1.1 MD15G1367300.v1.1
prunus_persica Prupe.1G515200_v2.0.a1
pyrus_communis pycom08g15520 pycom15g32930
rosa_chinensis RchiOBHm_Chr7g0239291
rosa_laevigata RLG00000000766
rosa_multiflora Rmu_sc0007840.1_g000005 Rmu_sc0026864.1_g000001
rosa_roxburghii Rroxscaffold_3G00221050
rosa_rugosa Rorug07G0327100
rosa_samantha Rh7AG480400 Rh7BG453100 Rh7CG498300 Rh7DG466400
rosa_wichuraiana Rw7G040240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 131
AccI GTMKAC 1 cut(s) 5
AccII CGCG 2 cut(s) 261, 586
AccIII TCCGGA 1 cut(s) 147
AciI CCGC 4 cut(s) 129, 436, 586, 721
AclWI GGATC 3 cut(s) 242, 663, 882
AcsI RAATTY 1 cut(s) 632
AfaI GTAC 2 cut(s) 683, 848
AfiI CCNNNNNNNGG 3 cut(s) 114, 336, 499
AgsI TTSAA 1 cut(s) 73
AjnI CCWGG 2 cut(s) 492, 927
AjuI GAANNNNNNNTTGG 2 cut(s) 80, 112
AluBI AGCT 5 cut(s) 442, 462, 520, 665, 788
AluI AGCT 5 cut(s) 442, 462, 520, 665, 788
Alw21I GWGCWC 1 cut(s) 790
Alw26I GTCTC 2 cut(s) 399, 750
AlwI GGATC 3 cut(s) 242, 663, 882
Aor13HI TCCGGA 1 cut(s) 147
AoxI GGCC 4 cut(s) 447, 699, 879, 924
ApeKI GCWGC 1 cut(s) 35
ApoI RAATTY 1 cut(s) 632
Asp700I GAANNNNTTC 1 cut(s) 68
AspS9I GGNCC 5 cut(s) 448, 699, 718, 841, 925
AsuHPI GGTGA 1 cut(s) 499
AvaII GGWCC 2 cut(s) 718, 841
BanII GRGCYC 1 cut(s) 790
BbsI GAAGAC 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 790
BbvCI CCTCAGC 1 cut(s) 816
BbvI GCAGC 1 cut(s) 22
BccI CCATC 2 cut(s) 72, 116
BciT130I CCWGG 2 cut(s) 494, 929
BcoDI GTCTC 2 cut(s) 399, 750
BfaI CTAG 1 cut(s) 795
BfmI CTRYAG 1 cut(s) 331
BglII AGATCT 2 cut(s) 178, 534
BisI GCNGC 2 cut(s) 36, 129
BlpI GCTNAGC 1 cut(s) 516
BlsI GCNGC 2 cut(s) 37, 130
Bme1390I CCNGG 2 cut(s) 494, 929
Bme18I GGWCC 2 cut(s) 718, 841
BmgT120I GGNCC 5 cut(s) 448, 699, 718, 841, 925
BmiI GGNNCC 1 cut(s) 450
BmrFI CCNGG 2 cut(s) 494, 929
BmrI ACTGGG 1 cut(s) 435
BmsI GCATC 3 cut(s) 47, 154, 253
BmuI ACTGGG 1 cut(s) 435
BpiI GAAGAC 1 cut(s) 51
BplI GAGNNNNNCTC 4 cut(s) 165, 197, 521, 553
BpmI CTGGAG 1 cut(s) 921
Bpu10I CCTNAGC 1 cut(s) 816
Bpu1102I GCTNAGC 1 cut(s) 516
BpuEI CTTGAG 2 cut(s) 44, 170
BsaJI CCNNGG 3 cut(s) 510, 672, 927
BsaWI WCCGGW 1 cut(s) 147
BsaXI ACNNNNNCTCC 2 cut(s) 471, 501
Bsc4I CCNNNNNNNGG 3 cut(s) 114, 336, 499
Bse1I ACTGG 4 cut(s) 198, 430, 504, 904
BseAI TCCGGA 1 cut(s) 147
BseBI CCWGG 2 cut(s) 494, 929
BseDI CCNNGG 3 cut(s) 510, 672, 927
BseGI GGATG 4 cut(s) 38, 83, 412, 682
BseLI CCNNNNNNNGG 3 cut(s) 114, 336, 499
BseMII CTCAG 4 cut(s) 42, 552, 717, 807
BseNI ACTGG 4 cut(s) 198, 430, 504, 904
BseRI GAGGAG 1 cut(s) 173
BseXI GCAGC 1 cut(s) 22
BsgI GTGCAG 1 cut(s) 327
Bsh1236I CGCG 2 cut(s) 261, 586
BshFI GGCC 4 cut(s) 449, 701, 881, 926
BsiHKAI GWGCWC 1 cut(s) 790
BsiSI CCGG 1 cut(s) 148
BslFI GGGAC 4 cut(s) 2, 14, 443, 851
BslI CCNNNNNNNGG 3 cut(s) 114, 336, 499
BsmAI GTCTC 2 cut(s) 399, 750
BsmFI GGGAC 4 cut(s) 2, 14, 443, 851
BsmI GAATGC 1 cut(s) 949
BsnI GGCC 4 cut(s) 449, 701, 881, 926
Bsp1286I GDGCHC 1 cut(s) 790
Bsp13I TCCGGA 1 cut(s) 147
Bsp143I GATC 6 cut(s) 178, 247, 534, 600, 655, 874
Bsp1720I GCTNAGC 1 cut(s) 516
BspACI CCGC 4 cut(s) 129, 436, 586, 721
BspANI GGCC 4 cut(s) 449, 701, 881, 926
BspCNI CTCAG 4 cut(s) 43, 551, 718, 808
BspEI TCCGGA 1 cut(s) 147
BspFNI CGCG 2 cut(s) 261, 586
BspLI GGNNCC 1 cut(s) 450
BspMAI CTGCAG 1 cut(s) 335
BspPI GGATC 3 cut(s) 242, 663, 882
BsrBI CCGCTC 1 cut(s) 131
BsrI ACTGG 4 cut(s) 198, 430, 504, 904
BssECI CCNNGG 3 cut(s) 510, 672, 927
BssMI GATC 6 cut(s) 178, 247, 534, 600, 655, 874
BssT1I CCWWGG 1 cut(s) 672
Bst2UI CCWGG 2 cut(s) 494, 929
Bst4CI ACNGT 1 cut(s) 863
Bst6I CTCTTC 2 cut(s) 396, 753
BstC8I GCNNGC 3 cut(s) 331, 369, 440
BstDEI CTNAG 7 cut(s) 11, 51, 516, 538, 695, 726, 816
BstENI CCTNNNNNAGG 1 cut(s) 334
BstF5I GGATG 4 cut(s) 38, 83, 412, 682
BstFNI CGCG 2 cut(s) 261, 586
BstKTI GATC 6 cut(s) 181, 250, 537, 603, 658, 877
BstMAI GTCTC 2 cut(s) 399, 750
BstMBI GATC 6 cut(s) 178, 247, 534, 600, 655, 874
BstMWI GCNNNNNNNGC 6 cut(s) 272, 281, 326, 368, 720, 812
BstNI CCWGG 2 cut(s) 494, 929
BstSCI CCNGG 2 cut(s) 492, 927
BstSFI CTRYAG 1 cut(s) 331
BstUI CGCG 2 cut(s) 261, 586
BstV1I GCAGC 1 cut(s) 22
BstV2I GAAGAC 1 cut(s) 51
BstX2I RGATCY 3 cut(s) 178, 534, 655
BstYI RGATCY 3 cut(s) 178, 534, 655
BsuRI GGCC 4 cut(s) 449, 701, 881, 926
BtgZI GCGATG 1 cut(s) 276
BtsCI GGATG 4 cut(s) 38, 83, 412, 682
BtsIMutI CAGTG 2 cut(s) 497, 868
Cac8I GCNNGC 3 cut(s) 331, 369, 440
Cfr13I GGNCC 5 cut(s) 448, 699, 718, 841, 925
Csp6I GTAC 2 cut(s) 682, 847
CviAII CATG 4 cut(s) 347, 527, 826, 938
CviQI GTAC 2 cut(s) 682, 847
DdeI CTNAG 7 cut(s) 11, 51, 516, 538, 695, 726, 816
DpnI GATC 6 cut(s) 180, 249, 536, 602, 657, 876
DpnII GATC 6 cut(s) 178, 247, 534, 600, 655, 874
Eam1104I CTCTTC 2 cut(s) 396, 753
EarI CTCTTC 2 cut(s) 396, 753
EciI GGCGGA 1 cut(s) 710
Ecl136II GAGCTC 1 cut(s) 788
Eco130I CCWWGG 1 cut(s) 672
Eco24I GRGCYC 1 cut(s) 790
Eco32I GATATC 1 cut(s) 565
Eco47I GGWCC 2 cut(s) 718, 841
Eco53kI GAGCTC 1 cut(s) 788
EcoICRI GAGCTC 1 cut(s) 788
EcoNI CCTNNNNNAGG 1 cut(s) 334
EcoO109I RGGNCCY 1 cut(s) 841
EcoRI GAATTC 1 cut(s) 632
EcoRII CCWGG 2 cut(s) 492, 927
EcoRV GATATC 1 cut(s) 565
EcoT14I CCWWGG 1 cut(s) 672
EcoT22I ATGCAT 1 cut(s) 268
EcoT38I GRGCYC 1 cut(s) 790
ErhI CCWWGG 1 cut(s) 672
FaeI CATG 4 cut(s) 350, 530, 829, 941
FalI AAGNNNNNCTT 4 cut(s) 53, 85, 355, 387
FaqI GGGAC 4 cut(s) 2, 14, 443, 851
FatI CATG 4 cut(s) 346, 526, 825, 937
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 2 cut(s) 36, 129
FokI GGATG 4 cut(s) 25, 90, 419, 689
FriOI GRGCYC 1 cut(s) 790
Fsp4HI GCNGC 2 cut(s) 36, 129
FspBI CTAG 1 cut(s) 795
GluI GCNGC 2 cut(s) 36, 129
GsuI CTGGAG 1 cut(s) 921
HaeIII GGCC 4 cut(s) 449, 701, 881, 926
HapII CCGG 1 cut(s) 148
Hin1II CATG 4 cut(s) 350, 530, 829, 941
HincII GTYRAC 2 cut(s) 6, 823
HindII GTYRAC 2 cut(s) 6, 823
HindIII AAGCTT 1 cut(s) 440
HinfI GANTC 3 cut(s) 15, 47, 574
HpaII CCGG 1 cut(s) 148
HphI GGTGA 1 cut(s) 499
Hpy166II GTNNAC 4 cut(s) 6, 297, 490, 823
Hpy188I TCNGA 5 cut(s) 43, 52, 511, 541, 660
Hpy188III TCNNGA 6 cut(s) 61, 148, 398, 571, 637, 872
Hpy8I GTNNAC 4 cut(s) 6, 297, 490, 823
HpyAV CCTTC 2 cut(s) 79, 776
HpyCH4III ACNGT 1 cut(s) 863
HpyCH4V TGCA 8 cut(s) 38, 161, 266, 320, 333, 344, 608, 689
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 281, 326, 368, 720, 812
HpyF3I CTNAG 7 cut(s) 11, 51, 516, 538, 695, 726, 816
Hsp92II CATG 4 cut(s) 350, 530, 829, 941
Kpn2I TCCGGA 1 cut(s) 147
Kzo9I GATC 6 cut(s) 178, 247, 534, 600, 655, 874
LmnI GCTCC 2 cut(s) 588, 785
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 3 cut(s) 47, 154, 253
MaeI CTAG 1 cut(s) 795
MaeIII GTNAC 1 cut(s) 212
MalI GATC 6 cut(s) 180, 249, 536, 602, 657, 876
MbiI CCGCTC 1 cut(s) 131
MboI GATC 6 cut(s) 178, 247, 534, 600, 655, 874
MboII GAAGA 5 cut(s) 56, 188, 413, 544, 740
MflI RGATCY 3 cut(s) 178, 534, 655
MhlI GDGCHC 1 cut(s) 790
MluCI AATT 2 cut(s) 632, 759
MlyI GAGTC 2 cut(s) 24, 41
MmeI TCCRAC 1 cut(s) 913
Mph1103I ATGCAT 1 cut(s) 268
MroI TCCGGA 1 cut(s) 147
MroXI GAANNNNTTC 1 cut(s) 68
MseI TTAA 3 cut(s) 762, 837, 885
MslI CAYNNNNRTG 2 cut(s) 123, 942
MspI CCGG 1 cut(s) 148
MspR9I CCNGG 2 cut(s) 494, 929
Mva1269I GAATGC 1 cut(s) 949
MvaI CCWGG 2 cut(s) 494, 929
MvnI CGCG 2 cut(s) 261, 586
MwoI GCNNNNNNNGC 6 cut(s) 272, 281, 326, 368, 720, 812
NdeII GATC 6 cut(s) 178, 247, 534, 600, 655, 874
NlaIII CATG 4 cut(s) 350, 530, 829, 941
NlaIV GGNNCC 1 cut(s) 450
NmuCI GTSAC 1 cut(s) 212
NsiI ATGCAT 1 cut(s) 268
PctI GAATGC 1 cut(s) 949
PdmI GAANNNNTTC 1 cut(s) 68
PfeI GAWTC 1 cut(s) 574
PkrI GCNGC 2 cut(s) 37, 130
PleI GAGTC 2 cut(s) 23, 41
PpsI GAGTC 2 cut(s) 23, 41
PpuMI RGGWCCY 1 cut(s) 841
Psp124BI GAGCTC 1 cut(s) 790
Psp5II RGGWCCY 1 cut(s) 841
Psp6I CCWGG 2 cut(s) 492, 927
PspGI CCWGG 2 cut(s) 492, 927
PspN4I GGNNCC 1 cut(s) 450
PspPI GGNCC 5 cut(s) 448, 699, 718, 841, 925
PspPPI RGGWCCY 1 cut(s) 841
PstI CTGCAG 1 cut(s) 335
PsuI RGATCY 3 cut(s) 178, 534, 655
RsaI GTAC 2 cut(s) 683, 848
RsaNI GTAC 2 cut(s) 682, 847
RseI CAYNNNNRTG 2 cut(s) 123, 942
SacI GAGCTC 1 cut(s) 790
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 3 cut(s) 762, 837, 885
SatI GCNGC 2 cut(s) 36, 129
Sau3AI GATC 6 cut(s) 178, 247, 534, 600, 655, 874
Sau96I GGNCC 5 cut(s) 448, 699, 718, 841, 925
SchI GAGTC 2 cut(s) 24, 41
ScrFI CCNGG 2 cut(s) 494, 929
SduI GDGCHC 1 cut(s) 790
SfaNI GCATC 3 cut(s) 47, 154, 253
SfcI CTRYAG 1 cut(s) 331
SinI GGWCC 2 cut(s) 718, 841
SmiMI CAYNNNNRTG 2 cut(s) 123, 942
SmlI CTYRAG 2 cut(s) 59, 185
SmoI CTYRAG 2 cut(s) 59, 185
Sse9I AATT 2 cut(s) 632, 759
SsiI CCGC 4 cut(s) 129, 436, 586, 721
SspI AATATT 1 cut(s) 734
SspMI CTAG 1 cut(s) 795
SstI GAGCTC 1 cut(s) 790
StyD4I CCNGG 2 cut(s) 492, 927
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 1 cut(s) 863
TaqI TCGA 2 cut(s) 5, 399
TasI AATT 2 cut(s) 632, 759
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 1 cut(s) 574
Tru1I TTAA 3 cut(s) 762, 837, 885
Tru9I TTAA 3 cut(s) 762, 837, 885
TscAI CASTG 2 cut(s) 504, 868
TseFI GTSAC 1 cut(s) 212
TseI GCWGC 1 cut(s) 35
Tsp45I GTSAC 1 cut(s) 212
TspDTI ATGAA 4 cut(s) 363, 645, 795, 924
TspGWI ACGGA 1 cut(s) 186
TspRI CASTG 2 cut(s) 504, 868
VpaK11BI GGWCC 2 cut(s) 718, 841
XagI CCTNNNNNAGG 1 cut(s) 334
XapI RAATTY 1 cut(s) 632
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 68
XspI CTAG 1 cut(s) 795
Zsp2I ATGCAT 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.