Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0003905

Physical Location & Seq

Genomic Coordinates Forward (+)

36195911 .. 36202221

Gene Structure 6311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGAAGGAGCCATTGGTGAGGACGAAGGTCTTAATTCGGCACTTGCCTCCGTCTCTGTCTCAGTCCGATCTCCTCCACCAAATCGACCACCAGCTCGCCGACCGCTACAACTGGCTCTGCTTCCGTCCAGGAAAGAATAGCCAGAAGAACCAGAGGTATTCTCGGGCCTACATAGATTTCAAGCGACCTGAGGATGTTTTTGAGTTTGCTGAATTCTTTGATGGACACTTGTTTGTCAATGAGAAGGGGGCTCAATTCAAGGCTATAGTTGAATATGCACCCTCACAGCGTGTTCCAAAACCTAGTACGAAAAAGGATGGCCGTGAAGGGACCATATATAAAGATCCTGATTATTTGGAGTTCCTCAAACTTATTGCAAAGCCTGTCGAGCATCTTCCTAGTGCAGAAATACAGCTGGAGAGAAAGGAAGCAGAACAAGCTGGTGGTGCAAAAGAAGCTCCTATTGTTACACCCCTCATGGAGTATGTTCGTCAGAAACGAGCTATTGGAAGTGGGACTCAGGTTTCATCCGTTGTTCGGAAGGTTAGAAGAAGAGTCGGGGCTGCCTCTGTTAGCAAACGTGGCTCACCTTCTACAAAACGGGTCTCTGAGAAGAAAAAGTACATAATAAAGGACGGTACTAAACAGACAAGTCGAAGGGACAAGTCCACTTTCAATGTGGTACCCAGGCGAGAGGATCAGTTGGCTCGTTCAAGTGGAAAAGAAACATTAGAAAATGAAATTGGTTCTGTTTCAGGAATCCCTGTGATTTCTGACTCTGGAAAGAAGAAAATCTTACTTATTAAAGGAAAAGAGCGTGAAATACCTCCCGCTGAGGGTATGTCACAACTTGGAAGTTCTCCTGTTTCACATGCTCCGAAGCAGAACCAAAGGCGTGAGGCTACTGGAAGAATGATCAGAAGCATACTTTTAAATAATGAGGGACGCCAAAGTCAAACTTCAACTGAAACTCAGCCTCAGCAGAAAATTCAAAGTCTGAACACAGATGTTAAGCGAGTATCTCGACCTTCCAATGCAAGGTTAGGGCTGAATGGTCAGGTCTCTACTAATGAGCTTAACTCAATGAGCTCTGAAGGGAATAGAAAGAGGGCAACAGTTGATAGATTTACAAAAAAGGACCTGCATAGTACAACTAGTGTTAGTGAGAGGCAGGAAAAAAATACACGAAACAAGGATAGACCTGATCGTGGTGTTTGGGCTCCTCTTCGTCGTGCTGATAGTTCATGTGCTAGTGATGAGCATTTGCCATCCTCCGGGGTACAACGCCCTGAATTAATATATGATTCCTTTGAAGGTAAGGGTCATGGAGAAGGGAAGGACGACTCTTCTTATGGAAGCAGGACTGGGGAAGTTATAAACCCTACAAGTGGACGTAATAGTTCTCATGTAGACAATGGTTCACATAGACATTTTGGTCGCCATGGAAGTGCGCATAATATGAAAGATGACAGTTCTGTAAATGTAGGTGAGGGGAAGCCATCTAAAAAAGGTGCTTCTGTTCATGGTACCCCTGAGAAACAAGTGTGGGTTCAGAAATCATCCTCAGGTTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000956 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009863 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010605 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0023052 GO:0031974 GO:0031981 GO:0032870 GO:0034641 GO:0034655 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046677 GO:0046700 GO:0048519 GO:0048571 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 map03013 map03015

Pfam Domains

Protein Families

Smg4_UPF3

Protein Analysis

525

Amino Acids

58.39

Weight (kDa)

9.95

Isoelectric Point (pI)

47.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Smg4_UPF3	PF03467	7 - 168	1e-54	Smg-4/UPF3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33980 AT1G33980
fragaria_vesca	FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510 FvH4_5g32510
malus_domestica	MD08G1216600.v1.1 MD15G1403800.v1.1
prunus_persica	Prupe.1G550000_v2.0.a1
pyrus_communis	pycom08g18750 pycom15g36110
rosa_chinensis	RchiOBHm_Chr6g0271031 RchiOBHm_Chr7g0229091
rosa_laevigata	RLG00000001531
rosa_multiflora	Rmu_sc0000271.1_g000018
rosa_roxburghii	Rroxscaffold_3G00230720
rosa_rugosa	Rorug07G0255600 Rorug07G0255700 Rorug07G0255700 Rorug07G0255800 Rorug07G0255900 Rorug07G0256000
rosa_samantha	Rh7AG406900 Rh7BG386300 Rh7CG424600 Rh7DG400900
rosa_wichuraiana	Rw7G033780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1376
AasI	GACNNNNNNGTC	2 cut(s)	951, 1434
Acc16I	TGCGCA	1 cut(s)	1452
Acc36I	ACCTGC	1 cut(s)	1149
Acc65I	GGTACC	2 cut(s)	682, 1526
AccB1I	GGYRCC	2 cut(s)	682, 1526
AccI	GTMKAC	1 cut(s)	1410
AciI	CCGC	2 cut(s)	103, 831
AclWI	GGATC	2 cut(s)	338, 705
AcoI	YGGCCR	1 cut(s)	319
AcsI	RAATTY	2 cut(s)	212, 987
AcuI	CTGAAG	1 cut(s)	1113
AcyI	GRCGYC	1 cut(s)	946
AdeI	CACNNNGTG	1 cut(s)	290
AfaI	GTAC	7 cut(s)	307, 623, 640, 684, 1150, 1281, 1528
AfiI	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1388
AgsI	TTSAA	8 cut(s)	181, 259, 272, 676, 714, 963, 992, 1313
AhlI	ACTAGT	1 cut(s)	1154
AjnI	CCWGG	2 cut(s)	127, 686
AjuI	GAANNNNNNNTTGG	3 cut(s)	28, 726, 758
AluBI	AGCT	7 cut(s)	94, 415, 440, 458, 503, 1075, 1089
AluI	AGCT	7 cut(s)	94, 415, 440, 458, 503, 1075, 1089
Alw21I	GWGCWC	1 cut(s)	1091
Alw26I	GTCTC	4 cut(s)	57, 63, 610, 1066
AlwI	GGATC	2 cut(s)	338, 705
Ama87I	CYCGRG	1 cut(s)	162
AoxI	GGCC	2 cut(s)	165, 319
ApeKI	GCWGC	1 cut(s)	563
ApoI	RAATTY	2 cut(s)	212, 987
AseI	ATTAAT	1 cut(s)	1295
Asp718I	GGTACC	2 cut(s)	682, 1526
AspLEI	GCGC	1 cut(s)	1453
AspS9I	GGNCC	3 cut(s)	165, 330, 1138
AsuC2I	CCSGG	1 cut(s)	1276
AsuHPI	GGTGA	3 cut(s)	28, 579, 1499
AvaI	CYCGRG	1 cut(s)	162
AvaII	GGWCC	2 cut(s)	330, 1138
AxyI	CCTNAGG	2 cut(s)	189, 1564
BanI	GGYRCC	2 cut(s)	682, 1526
BanII	GRGCYC	3 cut(s)	253, 1091, 1222
BarI	GAAGNNNNNNTAC	2 cut(s)	605, 637
Bbv12I	GWGCWC	1 cut(s)	1091
BbvCI	CCTCAGC	2 cut(s)	834, 978
BbvI	GCAGC	1 cut(s)	550
BccI	CCATC	4 cut(s)	215, 311, 1276, 1507
BceAI	ACGGC	1 cut(s)	306
BciT130I	CCWGG	2 cut(s)	129, 688
BclI	TGATCA	1 cut(s)	915
BcnI	CCSGG	1 cut(s)	1276
BcoDI	GTCTC	4 cut(s)	57, 63, 610, 1066
BcuI	ACTAGT	1 cut(s)	1154
BfaI	CTAG	4 cut(s)	303, 399, 1155, 1251
BfmI	CTRYAG	1 cut(s)	264
BfuAI	ACCTGC	1 cut(s)	1149
BisI	GCNGC	1 cut(s)	564
BlsI	GCNGC	1 cut(s)	565
Bme1390I	CCNGG	3 cut(s)	129, 688, 1276
Bme18I	GGWCC	2 cut(s)	330, 1138
BmeT110I	CYCGRG	1 cut(s)	162
BmgT120I	GGNCC	3 cut(s)	165, 330, 1138
BmiI	GGNNCC	5 cut(s)	9, 331, 684, 1221, 1528
BmrFI	CCNGG	3 cut(s)	129, 688, 1276
BmrI	ACTGGG	1 cut(s)	1374
BmsI	GCATC	1 cut(s)	400
BmuI	ACTGGG	1 cut(s)	1374
BoxI	GACNNNNGTC	1 cut(s)	26
BplI	GAGNNNNNCTC	4 cut(s)	145, 177, 1064, 1096
BpmI	CTGGAG	1 cut(s)	437
Bpu10I	CCTNAGC	2 cut(s)	834, 978
BpuMI	CCSGG	1 cut(s)	1276
BsaHI	GRCGYC	1 cut(s)	946
BsaI	GGTCTC	2 cut(s)	610, 1066
BsaJI	CCNNGG	3 cut(s)	686, 1275, 1441
Bsc4I	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1388
Bse1I	ACTGG	3 cut(s)	116, 910, 1369
Bse21I	CCTNAGG	2 cut(s)	189, 1564
BseBI	CCWGG	2 cut(s)	129, 688
BseDI	CCNNGG	3 cut(s)	686, 1275, 1441
BseGI	GGATG	5 cut(s)	199, 322, 527, 1268, 1559
BseLI	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1388
BseMII	CTCAG	8 cut(s)	74, 180, 533, 600, 825, 986, 992, 1524
BseNI	ACTGG	3 cut(s)	116, 910, 1369
BseRI	GAGGAG	2 cut(s)	62, 1212
BseXI	GCAGC	1 cut(s)	550
BsgI	GTGCAG	1 cut(s)	423
Bsh1285I	CGRYCG	1 cut(s)	103
BshFI	GGCC	2 cut(s)	167, 321
BshNI	GGYRCC	2 cut(s)	682, 1526
BsiEI	CGRYCG	1 cut(s)	103
BsiHKAI	GWGCWC	1 cut(s)	1091
BsiHKCI	CYCGRG	1 cut(s)	162
BsiSI	CCGG	1 cut(s)	1275
BslFI	GGGAC	4 cut(s)	343, 529, 674, 957
BslI	CCNNNNNNNGG	6 cut(s)	537, 836, 1038, 1208, 1274, 1388
BsmAI	GTCTC	4 cut(s)	57, 63, 610, 1066
BsmBI	CGTCTC	1 cut(s)	57
BsmFI	GGGAC	4 cut(s)	343, 529, 674, 957
BsnI	GGCC	2 cut(s)	167, 321
Bso31I	GGTCTC	2 cut(s)	610, 1066
BsoBI	CYCGRG	1 cut(s)	162
Bsp1286I	GDGCHC	3 cut(s)	253, 1091, 1222
Bsp143I	GATC	5 cut(s)	67, 343, 697, 915, 1204
Bsp19I	CCATGG	1 cut(s)	1441
BspACI	CCGC	2 cut(s)	103, 831
BspANI	GGCC	2 cut(s)	167, 321
BspCNI	CTCAG	8 cut(s)	73, 181, 532, 601, 826, 985, 991, 1525
BspLI	GGNNCC	5 cut(s)	9, 331, 684, 1221, 1528
BspMI	ACCTGC	1 cut(s)	1149
BspPI	GGATC	2 cut(s)	338, 705
BspT107I	GGYRCC	2 cut(s)	682, 1526
BspTNI	GGTCTC	2 cut(s)	610, 1066
BsrI	ACTGG	3 cut(s)	116, 910, 1369
BssECI	CCNNGG	3 cut(s)	686, 1275, 1441
BssMI	GATC	5 cut(s)	67, 343, 697, 915, 1204
BssNI	GRCGYC	1 cut(s)	946
BssT1I	CCWWGG	1 cut(s)	1441
Bst2UI	CCWGG	2 cut(s)	129, 688
Bst4CI	ACNGT	3 cut(s)	638, 1117, 1472
Bst6I	CTCTTC	3 cut(s)	547, 1230, 1351
BstACI	GRCGYC	1 cut(s)	946
BstC8I	GCNNGC	1 cut(s)	96
BstDSI	CCRYGG	1 cut(s)	1441
BstF5I	GGATG	5 cut(s)	199, 322, 527, 1268, 1559
BstHHI	GCGC	1 cut(s)	1453
BstKTI	GATC	5 cut(s)	70, 346, 700, 918, 1207
BstMAI	GTCTC	4 cut(s)	57, 63, 610, 1066
BstMBI	GATC	5 cut(s)	67, 343, 697, 915, 1204
BstMCI	CGRYCG	1 cut(s)	103
BstMWI	GCNNNNNNNGC	5 cut(s)	388, 437, 446, 455, 582
BstNI	CCWGG	2 cut(s)	129, 688
BstNSI	RCATGY	1 cut(s)	875
BstPAI	GACNNNNGTC	1 cut(s)	26
BstSCI	CCNGG	3 cut(s)	127, 686, 1274
BstSFI	CTRYAG	1 cut(s)	264
BstV1I	GCAGC	1 cut(s)	550
BstX2I	RGATCY	1 cut(s)	343
BstYI	RGATCY	1 cut(s)	343
Bsu36I	CCTNAGG	2 cut(s)	189, 1564
BsuRI	GGCC	2 cut(s)	167, 321
BtgI	CCRYGG	1 cut(s)	1441
BtsCI	GGATG	5 cut(s)	199, 322, 527, 1268, 1559
BveI	ACCTGC	1 cut(s)	1149
Cac8I	GCNNGC	1 cut(s)	96
CfoI	GCGC	1 cut(s)	1453
Cfr13I	GGNCC	3 cut(s)	165, 330, 1138
CseI	GACGC	1 cut(s)	954
Csp6I	GTAC	7 cut(s)	306, 622, 639, 683, 1149, 1280, 1527
CviAII	CATG	7 cut(s)	478, 872, 1245, 1325, 1406, 1442, 1523
CviQI	GTAC	7 cut(s)	306, 622, 639, 683, 1149, 1280, 1527
DpnI	GATC	5 cut(s)	69, 345, 699, 917, 1206
DpnII	GATC	5 cut(s)	67, 343, 697, 915, 1204
DraI	TTTAAA	1 cut(s)	933
DraIII	CACNNNGTG	1 cut(s)	290
DrdI	GACNNNNNNGTC	2 cut(s)	951, 1434
DseDI	GACNNNNNNGTC	2 cut(s)	951, 1434
EaeI	YGGCCR	1 cut(s)	319
Eam1104I	CTCTTC	3 cut(s)	547, 1230, 1351
EarI	CTCTTC	3 cut(s)	547, 1230, 1351
Ecl136II	GAGCTC	1 cut(s)	1089
Eco130I	CCWWGG	1 cut(s)	1441
Eco24I	GRGCYC	3 cut(s)	253, 1091, 1222
Eco31I	GGTCTC	2 cut(s)	610, 1066
Eco47I	GGWCC	2 cut(s)	330, 1138
Eco53kI	GAGCTC	1 cut(s)	1089
Eco57I	CTGAAG	1 cut(s)	1113
Eco81I	CCTNAGG	2 cut(s)	189, 1564
Eco88I	CYCGRG	1 cut(s)	162
EcoICRI	GAGCTC	1 cut(s)	1089
EcoO109I	RGGNCCY	1 cut(s)	1138
EcoRI	GAATTC	1 cut(s)	212
EcoRII	CCWGG	2 cut(s)	127, 686
EcoT14I	CCWWGG	1 cut(s)	1441
EcoT38I	GRGCYC	3 cut(s)	253, 1091, 1222
ErhI	CCWWGG	1 cut(s)	1441
Esp3I	CGTCTC	1 cut(s)	57
FaeI	CATG	7 cut(s)	481, 875, 1248, 1328, 1409, 1445, 1526
FalI	AAGNNNNNCTT	4 cut(s)	779, 811, 943, 975
FaqI	GGGAC	4 cut(s)	343, 529, 674, 957
FatI	CATG	7 cut(s)	477, 871, 1244, 1324, 1405, 1441, 1522
FauI	CCCGC	1 cut(s)	838
FbaI	TGATCA	1 cut(s)	915
FblI	GTMKAC	1 cut(s)	1410
Fnu4HI	GCNGC	1 cut(s)	564
FokI	GGATG	5 cut(s)	206, 329, 514, 1255, 1546
FriOI	GRGCYC	3 cut(s)	253, 1091, 1222
Fsp4HI	GCNGC	1 cut(s)	564
FspAI	RTGCGCAY	1 cut(s)	1452
FspBI	CTAG	4 cut(s)	303, 399, 1155, 1251
FspI	TGCGCA	1 cut(s)	1452
GlaI	GCGC	1 cut(s)	1452
GluI	GCNGC	1 cut(s)	564
GsuI	CTGGAG	1 cut(s)	437
HaeIII	GGCC	2 cut(s)	167, 321
HapII	CCGG	1 cut(s)	1275
HgaI	GACGC	1 cut(s)	954
HhaI	GCGC	1 cut(s)	1453
Hin1I	GRCGYC	1 cut(s)	946
Hin1II	CATG	7 cut(s)	481, 875, 1248, 1328, 1409, 1445, 1526
Hin6I	GCGC	1 cut(s)	1451
HinP1I	GCGC	1 cut(s)	1451
HinfI	GANTC	6 cut(s)	517, 555, 759, 776, 1304, 1343
HpaII	CCGG	1 cut(s)	1275
HphI	GGTGA	3 cut(s)	28, 579, 1499
Hpy166II	GTNNAC	4 cut(s)	669, 1391, 1411, 1421
Hpy188III	TCNNGA	4 cut(s)	347, 756, 780, 1023
Hpy8I	GTNNAC	4 cut(s)	669, 1391, 1411, 1421
Hpy99I	CGWCG	1 cut(s)	1233
HpyCH4III	ACNGT	3 cut(s)	638, 1117, 1472
HpyCH4IV	ACGT	2 cut(s)	580, 1393
HpyCH4V	TGCA	6 cut(s)	278, 377, 404, 449, 1037, 1144
HpyF10VI	GCNNNNNNNGC	5 cut(s)	388, 437, 446, 455, 582
HpySE526I	ACGT	2 cut(s)	580, 1393
Hsp92I	GRCGYC	1 cut(s)	946
Hsp92II	CATG	7 cut(s)	481, 875, 1248, 1328, 1409, 1445, 1526
HspAI	GCGC	1 cut(s)	1451
KpnI	GGTACC	2 cut(s)	686, 1530
Ksp22I	TGATCA	1 cut(s)	915
Kzo9I	GATC	5 cut(s)	67, 343, 697, 915, 1204
LmnI	GCTCC	4 cut(s)	7, 463, 880, 1225
Lsp1109I	GCAGC	1 cut(s)	550
LweI	GCATC	1 cut(s)	400
MaeI	CTAG	4 cut(s)	303, 399, 1155, 1251
MaeII	ACGT	2 cut(s)	580, 1393
MaeIII	GTNAC	2 cut(s)	466, 843
MalI	GATC	5 cut(s)	69, 345, 699, 917, 1206
MboI	GATC	5 cut(s)	67, 343, 697, 915, 1204
MboII	GAAGA	9 cut(s)	157, 386, 561, 564, 625, 799, 921, 1217, 1338
MflI	RGATCY	1 cut(s)	343
MhlI	GDGCHC	3 cut(s)	253, 1091, 1222
MluCI	AATT	6 cut(s)	33, 212, 254, 741, 987, 1292
MlyI	GAGTC	4 cut(s)	511, 564, 770, 1337
MseI	TTAA	6 cut(s)	32, 804, 932, 1011, 1077, 1295
MslI	CAYNNNNRTG	1 cut(s)	1446
MspA1I	CMGCKG	2 cut(s)	415, 833
MspI	CCGG	1 cut(s)	1275
MspR9I	CCNGG	3 cut(s)	129, 688, 1276
MvaI	CCWGG	2 cut(s)	129, 688
MwoI	GCNNNNNNNGC	5 cut(s)	388, 437, 446, 455, 582
NciI	CCSGG	1 cut(s)	1276
NcoI	CCATGG	1 cut(s)	1441
NdeII	GATC	5 cut(s)	67, 343, 697, 915, 1204
NlaIII	CATG	7 cut(s)	481, 875, 1248, 1328, 1409, 1445, 1526
NlaIV	GGNNCC	5 cut(s)	9, 331, 684, 1221, 1528
NmuCI	GTSAC	1 cut(s)	843
NsbI	TGCGCA	1 cut(s)	1452
NspI	RCATGY	1 cut(s)	875
PcsI	WCGNNNNNNNCGW	1 cut(s)	496
PfeI	GAWTC	2 cut(s)	759, 1304
PfoI	TCCNGGA	1 cut(s)	127
PkrI	GCNGC	1 cut(s)	565
PleI	GAGTC	4 cut(s)	511, 563, 770, 1337
PpsI	GAGTC	4 cut(s)	511, 563, 770, 1337
PpuMI	RGGWCCY	1 cut(s)	1138
PshAI	GACNNNNGTC	1 cut(s)	26
PshBI	ATTAAT	1 cut(s)	1295
PsiI	TTATAA	1 cut(s)	1376
Psp124BI	GAGCTC	1 cut(s)	1091
Psp5II	RGGWCCY	1 cut(s)	1138
Psp6I	CCWGG	2 cut(s)	127, 686
PspGI	CCWGG	2 cut(s)	127, 686
PspN4I	GGNNCC	5 cut(s)	9, 331, 684, 1221, 1528
PspPI	GGNCC	3 cut(s)	165, 330, 1138
PspPPI	RGGWCCY	1 cut(s)	1138
PsuI	RGATCY	1 cut(s)	343
PvuII	CAGCTG	1 cut(s)	415
RsaI	GTAC	7 cut(s)	307, 623, 640, 684, 1150, 1281, 1528
RsaNI	GTAC	7 cut(s)	306, 622, 639, 683, 1149, 1280, 1527
RseI	CAYNNNNRTG	1 cut(s)	1446
SacI	GAGCTC	1 cut(s)	1091
SaqAI	TTAA	6 cut(s)	32, 804, 932, 1011, 1077, 1295
SatI	GCNGC	1 cut(s)	564
Sau3AI	GATC	5 cut(s)	67, 343, 697, 915, 1204
Sau96I	GGNCC	3 cut(s)	165, 330, 1138
SchI	GAGTC	4 cut(s)	511, 564, 770, 1337
ScrFI	CCNGG	3 cut(s)	129, 688, 1276
SduI	GDGCHC	3 cut(s)	253, 1091, 1222
SfaNI	GCATC	1 cut(s)	400
SfcI	CTRYAG	1 cut(s)	264
SinI	GGWCC	2 cut(s)	330, 1138
SmiMI	CAYNNNNRTG	1 cut(s)	1446
SpeI	ACTAGT	1 cut(s)	1154
Sse9I	AATT	6 cut(s)	33, 212, 254, 741, 987, 1292
SsiI	CCGC	2 cut(s)	103, 831
SspMI	CTAG	4 cut(s)	303, 399, 1155, 1251
SstI	GAGCTC	1 cut(s)	1091
StyD4I	CCNGG	3 cut(s)	127, 686, 1274
StyI	CCWWGG	1 cut(s)	1441
TaaI	ACNGT	3 cut(s)	638, 1117, 1472
TaiI	ACGT	2 cut(s)	583, 1396
TaqI	TCGA	4 cut(s)	84, 387, 655, 1024
TasI	AATT	6 cut(s)	33, 212, 254, 741, 987, 1292
TatI	WGTACW	2 cut(s)	621, 1148
TfiI	GAWTC	2 cut(s)	759, 1304
Tru1I	TTAA	6 cut(s)	32, 804, 932, 1011, 1077, 1295
Tru9I	TTAA	6 cut(s)	32, 804, 932, 1011, 1077, 1295
TseFI	GTSAC	1 cut(s)	843
TseI	GCWGC	1 cut(s)	563
Tsp45I	GTSAC	1 cut(s)	843
TspDTI	ATGAA	6 cut(s)	17, 516, 753, 1233, 1475, 1511
TspGWI	ACGGA	3 cut(s)	39, 113, 520
VpaK11BI	GGWCC	2 cut(s)	330, 1138
VspI	ATTAAT	1 cut(s)	1295
XapI	RAATTY	2 cut(s)	212, 987
XceI	RCATGY	1 cut(s)	875
XcmI	CCANNNNNNNNNTGG	1 cut(s)	676
XmiI	GTMKAC	1 cut(s)	1410
XspI	CTAG	4 cut(s)	303, 399, 1155, 1251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.