Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0004587

Physical Location & Seq

Genomic Coordinates Reverse (-)

2902288 .. 2906342

Gene Structure 4055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGGCTCAAGATATGTCTGGTGCTGATTCACACCAAAGACGGCAAGGCCTTTTAAAAGATCAAGTTCGATTGGTTAAGAGAAAGGATTCTTCTCATTACGAGATTGCACCAATCCAAAATCCTTTGTCATTTGAGAAGGGTTTCTTTATATTAATCCGTGCATGCCAGTTGTTGGCCCAAAAGAATGAAGGAATAGTATTGGTAGGAGTTGCTGGTCCTTCTGGGGCTGGGAAGACTATATTTACAGAAAAGATAGTCAACTTTATGCCCAGCGTTGCTGTCATATCAATGGACAACTACAATGATGCCAGTCGGATTGTCGATGGCAACTTTGATGATCCACGCTTGACAGACTACGACACATTGCTCCAGAATGTCAATGATTTAAAAGCAGGGAAACCGGTTGAGGTTCCAGTTTATGACTTCAAGTCTAGTTCCCGCACAGGATACCGGACAGTTGAAGTCCCAAGCTCCCGTATTGTGATCATTGAGGGCATCTATGCTTTGAGTGAAAAGTTGCGACGTTATCTGGATCTACGAGTATCAGTCACAGGCGGTGTTCACTTTGACCTTGTCAAAAGGGTTTTACGGGACATACAAAGAGCTGGCCAAGAACCAGAAGAAATAATACATCAAATATCTGAAACTGTATATCCAATGTACAAGGCATTTATTGAGCCAGACCTTCAAACAGCACATATAAAAATTATCAACAAATTTAACCCATTTACTGGATTTCAGAGTCCCACTTACATTTTGAAGTCAGCAAAGAACTTGTCTGCGGATCGAATTAAGGCTGTGTTTTCTGAAGATCACACAGAAGCAAAGGAGGAGACGTATGATATATACCTTCTACCACCTGGTGAAGATCTCGAAGCTTGCCAATCATATCTGAGGATGCGGGATAAAGATGGGAAATATAGTCTAATGTTTGAGGAATGGGTGACAGATAATCCATTTGTTATATCACCAAGAATAACTTTTGAGGTCAGCGTGCGTCTTCTTGGTGGACTAATGGCCTTGGGTTACACCATTGCAACTATCCTTAAAAGGAGCAGCCATGTATTCTCCAACGATGGAGTGTGTGTAAAAATTGATTGGTTAGAGCAACTAAATCGTCGATATATTCAGGTGCAAGGAAAAGATCGGGTAGTTGTAAGATGTGTTGCCGAGCAGCTTGGCTTGGAAGGTTCATACATTCCTCGTACGTACATTGAACAGATTCAACTGGAAAAGCTTGTCAATGAGGTCATGGCTTTGCCAGATGATTTGAAGACGAGGCTTAGCCTAGATGAGGACCTTGTTTCAAGCCCCAAAGAAGCACTTTCCAGAGCCTCTGCAGATAGAGTTGCCATGAGAATTAAGAATCTCAAGAGTGGTATGTCGCAGTCATATACAAGCCAACGGGACAAAAGTACATCTAAGCTTACCGGGTATTCTTCCAGCAGTCAAAGGTTTGATGAGAGAAACACAGAGTCATCAACAACGCTAGCAAGCCAGGGAGTAGCTACTCAGCTTTCAGAACAAATGTCTTCGCTGAATGATAGAATGGATGACTTTACAAATCGAATCGAAGAGCTGAATTCCAAGCTGACCATGAAGAACTCTCCTAGCCAACAAAACATGGCTCTTCAAGCTGAAAACTGCAATGGCTCTGTTCCCACTTCGTATTTCATCTCTGGCTTAGGCAACGGTTCGTTAACTGGGGCGATAATGCCTAATTCCTCCTCTTCCTCACAGGTGACTAAGGAGTCTTCAGTAGTGGAAGAGATGTCAAGCGTTGCACGGGGACAACGTCAAATCATGCATCAGTTAGACAATCTCAGCAATCTTCTCCGGGATAGTATGGGAGAGAGACCTCGTCCGGTAAAAACTAACAGCAGGAAGAACATCGTAGCCCAACCCGAACCCTTGACAGTTCCTCTTGCAGCAACGCTTGCCGTTGGCGTTCTAGGAGTGATCATATACAAGGGTATCCTAACTAGGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

CYTH PRK

Protein Analysis

664

Amino Acids

74.05

Weight (kDa)

7.1

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	68 - 236	2.4e-25	Phosphoribulokinase / Uridine kinase family
CYTH	PF01928	252 - 404	3.3e-22	CYTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004587)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26190 AT1G26190 AT1G26190 AT1G26190 AT1G26190 AT1G26190
fragaria_vesca	FvH4_4g28680
malus_domestica	MD13G1052900.v1.1 MD16G1051900.v1.1
prunus_persica	Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1 Prupe.1G299100_v2.0.a1
pyrus_communis	pycom13g04740 pycom16g04560
rosa_chinensis	RchiOBHm_Chr4g0436791
rosa_multiflora	Rmu_sc0001837.1_g000006
rosa_roxburghii	Rroxscaffold_1G00000940 Rroxscaffold_5G00377860
rosa_rugosa	Rorug04G0296100 Rorug04G0296200 Rorug04G0296300
rosa_samantha	Rh4AG350600 Rh4BG359500 Rh4CG373800
rosa_wichuraiana	Rw4G030680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1750
AccB7I	CCANNNNNTGG	2 cut(s)	172, 731
AciI	CCGC	4 cut(s)	439, 555, 782, 901
AclWI	GGATC	3 cut(s)	332, 540, 792
AcoI	YGGCCR	1 cut(s)	607
AcsI	RAATTY	2 cut(s)	716, 1582
AcuI	CTGAAG	2 cut(s)	828, 1740
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	4 cut(s)	662, 1207, 1211, 1417
AfiI	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
AgeI	ACCGGT	1 cut(s)	400
AgsI	TTSAA	9 cut(s)	427, 461, 689, 760, 1217, 1226, 1273, 1308, 1634
AhdI	GACNNNNNGTC	1 cut(s)	427
AjnI	CCWGG	2 cut(s)	859, 1497
Alw26I	GTCTC	2 cut(s)	827, 1849
AlwI	GGATC	3 cut(s)	332, 540, 792
AoxI	GGCC	4 cut(s)	46, 174, 607, 1017
ApeKI	GCWGC	3 cut(s)	1056, 1174, 1928
ApoI	RAATTY	2 cut(s)	716, 1582
ArsI	GACNNNNNNTTYG	2 cut(s)	761, 793
AseI	ATTAAT	1 cut(s)	152
AsiGI	ACCGGT	1 cut(s)	400
Asp700I	GAANNNNTTC	3 cut(s)	85, 140, 1221
AspS9I	GGNCC	3 cut(s)	175, 215, 1297
AsuC2I	CCSGG	2 cut(s)	1432, 1838
AsuHPI	GGTGA	4 cut(s)	875, 955, 960, 1753
AsuNHI	GCTAGC	1 cut(s)	1489
AvaII	GGWCC	2 cut(s)	215, 1297
BaeI	ACNNNNGTAYC	2 cut(s)	1957, 1990
BalI	TGGCCA	1 cut(s)	609
BarI	GAAGNNNNNNTAC	2 cut(s)	612, 644
BbsI	GAAGAC	5 cut(s)	239, 992, 1280, 1524, 1746
BbvI	GCAGC	3 cut(s)	1068, 1186, 1940
BccI	CCATC	3 cut(s)	317, 905, 1070
BceAI	ACGGC	2 cut(s)	56, 1925
BcgI	CGANNNNNNTGC	2 cut(s)	1097, 1131
BciT130I	CCWGG	2 cut(s)	861, 1499
BciVI	GTATCC	2 cut(s)	440, 1985
BclI	TGATCA	2 cut(s)	483, 1959
BcnI	CCSGG	2 cut(s)	1432, 1838
BcoDI	GTCTC	2 cut(s)	827, 1849
BfaI	CTAG	6 cut(s)	432, 1289, 1490, 1611, 1952, 1983
BfmI	CTRYAG	1 cut(s)	1338
BfuI	GTATCC	2 cut(s)	440, 1985
BglII	AGATCT	1 cut(s)	868
BisI	GCNGC	3 cut(s)	1057, 1175, 1929
BlpI	GCTNAGC	1 cut(s)	1283
BlsI	GCNGC	3 cut(s)	1058, 1176, 1930
Bme1390I	CCNGG	4 cut(s)	861, 1432, 1499, 1838
Bme18I	GGWCC	2 cut(s)	215, 1297
BmeRI	GACNNNNNGTC	1 cut(s)	427
BmgT120I	GGNCC	3 cut(s)	175, 215, 1297
BmiI	GGNNCC	1 cut(s)	411
BmrFI	CCNGG	4 cut(s)	861, 1432, 1499, 1838
BmrI	ACTGGG	1 cut(s)	1713
BmsI	GCATC	4 cut(s)	295, 504, 888, 1816
BmtI	GCTAGC	1 cut(s)	1493
BmuI	ACTGGG	1 cut(s)	1713
BpiI	GAAGAC	5 cut(s)	239, 992, 1280, 1524, 1746
BpmI	CTGGAG	1 cut(s)	353
Bpu10I	CCTNAGC	1 cut(s)	1684
Bpu1102I	GCTNAGC	1 cut(s)	1283
BpuEI	CTTGAG	1 cut(s)	1355
BpuMI	CCSGG	2 cut(s)	1432, 1838
BsaAI	YACGTR	1 cut(s)	1209
BsaI	GGTCTC	1 cut(s)	1849
BsaJI	CCNNGG	2 cut(s)	1020, 1498
BsaWI	WCCGGW	3 cut(s)	400, 450, 1864
BsaXI	ACNNNNNCTCC	4 cut(s)	821, 851, 1071, 1101
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
Bse118I	RCCGGY	1 cut(s)	400
Bse1I	ACTGG	6 cut(s)	166, 309, 413, 736, 1233, 1708
Bse3DI	GCAATG	3 cut(s)	362, 1032, 1654
BseBI	CCWGG	2 cut(s)	861, 1499
BseDI	CCNNGG	2 cut(s)	1020, 1498
BseGI	GGATG	2 cut(s)	903, 1558
BseLI	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
BseMI	GCAATG	3 cut(s)	362, 1032, 1654
BseMII	CTCAG	3 cut(s)	884, 1526, 1837
BseNI	ACTGG	6 cut(s)	166, 309, 413, 736, 1233, 1708
BseRI	GAGGAG	2 cut(s)	845, 1717
BseXI	GCAGC	3 cut(s)	1068, 1186, 1940
BseYI	CCCAGC	2 cut(s)	227, 269
BshFI	GGCC	4 cut(s)	48, 176, 609, 1019
BshTI	ACCGGT	1 cut(s)	400
BsiSI	CCGG	5 cut(s)	401, 451, 1431, 1837, 1865
BsiWI	CGTACG	1 cut(s)	1205
BslFI	GGGAC	5 cut(s)	449, 605, 729, 1421, 1803
BslI	CCNNNNNNNGG	3 cut(s)	172, 731, 1294
BsmAI	GTCTC	2 cut(s)	827, 1849
BsmBI	CGTCTC	1 cut(s)	827
BsmFI	GGGAC	5 cut(s)	449, 605, 729, 1421, 1803
BsnI	GGCC	4 cut(s)	48, 176, 609, 1019
Bso31I	GGTCTC	1 cut(s)	1849
Bsp1407I	TGTACA	1 cut(s)	660
Bsp143I	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
Bsp1720I	GCTNAGC	1 cut(s)	1283
BspACI	CCGC	4 cut(s)	439, 555, 782, 901
BspANI	GGCC	4 cut(s)	48, 176, 609, 1019
BspCNI	CTCAG	3 cut(s)	885, 1525, 1836
BspLI	GGNNCC	1 cut(s)	411
BspMAI	CTGCAG	1 cut(s)	1342
BspOI	GCTAGC	1 cut(s)	1493
BspPI	GGATC	3 cut(s)	332, 540, 792
BspQI	GCTCTTC	2 cut(s)	1569, 1635
BspTNI	GGTCTC	1 cut(s)	1849
BsrDI	GCAATG	3 cut(s)	362, 1032, 1654
BsrFI	RCCGGY	1 cut(s)	400
BsrGI	TGTACA	1 cut(s)	660
BsrI	ACTGG	6 cut(s)	166, 309, 413, 736, 1233, 1708
BssAI	RCCGGY	1 cut(s)	400
BssECI	CCNNGG	2 cut(s)	1020, 1498
BssMI	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
BssT1I	CCWWGG	1 cut(s)	1020
Bst2UI	CCWGG	2 cut(s)	861, 1499
Bst4CI	ACNGT	4 cut(s)	457, 649, 1694, 1918
Bst6I	CTCTTC	4 cut(s)	1569, 1635, 1735, 1761
BstAPI	GCANNNNNTGC	1 cut(s)	1937
BstAUI	TGTACA	1 cut(s)	660
BstBAI	YACGTR	1 cut(s)	1209
BstC8I	GCNNGC	7 cut(s)	163, 607, 880, 995, 1491, 1495, 1938
BstDEI	CTNAG	7 cut(s)	893, 1283, 1422, 1512, 1684, 1746, 1823
BstENI	CCTNNNNNAGG	1 cut(s)	1292
BstF5I	GGATG	2 cut(s)	903, 1558
BstKTI	GATC	9 cut(s)	61, 340, 486, 535, 787, 814, 871, 1147, 1962
BstMAI	GTCTC	2 cut(s)	827, 1849
BstMBI	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
BstMWI	GCNNNNNNNGC	2 cut(s)	1634, 1937
BstNI	CCWGG	2 cut(s)	861, 1499
BstNSI	RCATGY	1 cut(s)	165
BstSCI	CCNGG	4 cut(s)	859, 1430, 1497, 1836
BstSFI	CTRYAG	1 cut(s)	1338
BstSNI	TACGTA	1 cut(s)	1209
BstV1I	GCAGC	3 cut(s)	1068, 1186, 1940
BstV2I	GAAGAC	5 cut(s)	239, 992, 1280, 1524, 1746
BstX2I	RGATCY	2 cut(s)	532, 868
BstYI	RGATCY	2 cut(s)	532, 868
BsuI	GTATCC	2 cut(s)	440, 1985
BsuRI	GGCC	4 cut(s)	48, 176, 609, 1019
BtsCI	GGATG	2 cut(s)	903, 1558
Cac8I	GCNNGC	7 cut(s)	163, 607, 880, 995, 1491, 1495, 1938
Cfr10I	RCCGGY	1 cut(s)	400
Cfr13I	GGNCC	3 cut(s)	175, 215, 1297
CseI	GACGC	1 cut(s)	986
CsiI	ACCWGGT	1 cut(s)	859
Csp6I	GTAC	4 cut(s)	661, 1206, 1210, 1416
CspAI	ACCGGT	1 cut(s)	400
CviAII	CATG	7 cut(s)	162, 1061, 1252, 1354, 1597, 1624, 1804
CviQI	GTAC	4 cut(s)	661, 1206, 1210, 1416
DdeI	CTNAG	7 cut(s)	893, 1283, 1422, 1512, 1684, 1746, 1823
DpnI	GATC	9 cut(s)	60, 339, 485, 534, 786, 813, 870, 1146, 1961
DpnII	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
DraI	TTTAAA	2 cut(s)	54, 387
DraIII	CACNNNGTG	1 cut(s)	863
DrdI	GACNNNNNNGTC	1 cut(s)	1750
DriI	GACNNNNNGTC	1 cut(s)	427
DseDI	GACNNNNNNGTC	1 cut(s)	1750
EaeI	YGGCCR	1 cut(s)	607
Eam1104I	CTCTTC	4 cut(s)	1569, 1635, 1735, 1761
Eam1105I	GACNNNNNGTC	1 cut(s)	427
EarI	CTCTTC	4 cut(s)	1569, 1635, 1735, 1761
Eco105I	TACGTA	1 cut(s)	1209
Eco130I	CCWWGG	1 cut(s)	1020
Eco147I	AGGCCT	1 cut(s)	48
Eco31I	GGTCTC	1 cut(s)	1849
Eco47I	GGWCC	2 cut(s)	215, 1297
Eco57I	CTGAAG	2 cut(s)	828, 1740
EcoNI	CCTNNNNNAGG	1 cut(s)	1292
EcoO109I	RGGNCCY	1 cut(s)	1297
EcoRI	GAATTC	1 cut(s)	1582
EcoRII	CCWGG	2 cut(s)	859, 1497
EcoT14I	CCWWGG	1 cut(s)	1020
EcoT22I	ATGCAT	1 cut(s)	1809
ErhI	CCWWGG	1 cut(s)	1020
Esp3I	CGTCTC	1 cut(s)	827
FaeI	CATG	7 cut(s)	165, 1064, 1255, 1357, 1600, 1627, 1807
FalI	AAGNNNNNCTT	6 cut(s)	128, 160, 964, 996, 1308, 1340
FaqI	GGGAC	5 cut(s)	449, 605, 729, 1421, 1803
FatI	CATG	7 cut(s)	161, 1060, 1251, 1353, 1596, 1623, 1803
FauI	CCCGC	2 cut(s)	446, 894
FbaI	TGATCA	2 cut(s)	483, 1959
Fnu4HI	GCNGC	3 cut(s)	1057, 1175, 1929
FokI	GGATG	2 cut(s)	910, 1565
Fsp4HI	GCNGC	3 cut(s)	1057, 1175, 1929
FspBI	CTAG	6 cut(s)	432, 1289, 1490, 1611, 1952, 1983
GluI	GCNGC	3 cut(s)	1057, 1175, 1929
GsaI	CCCAGC	2 cut(s)	231, 273
GsuI	CTGGAG	1 cut(s)	353
HaeIII	GGCC	4 cut(s)	48, 176, 609, 1019
HapII	CCGG	5 cut(s)	401, 451, 1431, 1837, 1865
HgaI	GACGC	1 cut(s)	986
Hin1II	CATG	7 cut(s)	165, 1064, 1255, 1357, 1600, 1627, 1807
HincII	GTYRAC	2 cut(s)	259, 1701
HindII	GTYRAC	2 cut(s)	259, 1701
HindIII	AAGCTT	3 cut(s)	876, 1235, 1424
HinfI	GANTC	8 cut(s)	26, 86, 742, 1222, 1366, 1475, 1569, 1751
HpaI	GTTAAC	1 cut(s)	1701
HpaII	CCGG	5 cut(s)	401, 451, 1431, 1837, 1865
HphI	GGTGA	4 cut(s)	875, 955, 960, 1753
Hpy166II	GTNNAC	4 cut(s)	259, 562, 1010, 1701
Hpy188I	TCNGA	6 cut(s)	315, 643, 741, 808, 894, 1522
Hpy188III	TCNNGA	6 cut(s)	8, 370, 530, 872, 1329, 1372
Hpy8I	GTNNAC	4 cut(s)	259, 562, 1010, 1701
Hpy99I	CGWCG	2 cut(s)	525, 1122
HpyAV	CCTTC	6 cut(s)	130, 182, 228, 695, 860, 1181
HpyCH4III	ACNGT	4 cut(s)	457, 649, 1694, 1918
HpyCH4IV	ACGT	4 cut(s)	523, 836, 1208, 1795
HpyCH4V	TGCA	9 cut(s)	107, 161, 1037, 1135, 1340, 1647, 1784, 1807, 1928
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1634, 1937
HpyF3I	CTNAG	7 cut(s)	893, 1283, 1422, 1512, 1684, 1746, 1823
HpySE526I	ACGT	4 cut(s)	523, 836, 1208, 1795
Hsp92II	CATG	7 cut(s)	165, 1064, 1255, 1357, 1600, 1627, 1807
Ksp22I	TGATCA	2 cut(s)	483, 1959
KspAI	GTTAAC	1 cut(s)	1701
Kzo9I	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
LguI	GCTCTTC	2 cut(s)	1569, 1635
LmnI	GCTCC	3 cut(s)	372, 476, 1053
Lsp1109I	GCAGC	3 cut(s)	1068, 1186, 1940
LweI	GCATC	4 cut(s)	295, 504, 888, 1816
MabI	ACCWGGT	1 cut(s)	859
MaeI	CTAG	6 cut(s)	432, 1289, 1490, 1611, 1952, 1983
MaeII	ACGT	4 cut(s)	523, 836, 1208, 1795
MaeIII	GTNAC	4 cut(s)	547, 943, 1025, 1741
MalI	GATC	9 cut(s)	60, 339, 485, 534, 786, 813, 870, 1146, 1961
MboI	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
MflI	RGATCY	2 cut(s)	532, 868
MlsI	TGGCCA	1 cut(s)	609
MluCI	AATT	7 cut(s)	705, 716, 789, 1092, 1359, 1582, 1720
MluNI	TGGCCA	1 cut(s)	609
MlyI	GAGTC	3 cut(s)	751, 1484, 1760
MmeI	TCCRAC	2 cut(s)	293, 1095
Mox20I	TGGCCA	1 cut(s)	609
Mph1103I	ATGCAT	1 cut(s)	1809
MroXI	GAANNNNTTC	3 cut(s)	85, 140, 1221
MscI	TGGCCA	1 cut(s)	609
MseI	TTAA	9 cut(s)	53, 75, 152, 386, 720, 792, 1047, 1362, 1700
MslI	CAYNNNNRTG	1 cut(s)	287
Msp20I	TGGCCA	1 cut(s)	609
MspI	CCGG	5 cut(s)	401, 451, 1431, 1837, 1865
MspR9I	CCNGG	4 cut(s)	861, 1432, 1499, 1838
MvaI	CCWGG	2 cut(s)	861, 1499
MwoI	GCNNNNNNNGC	2 cut(s)	1634, 1937
NciI	CCSGG	2 cut(s)	1432, 1838
NdeII	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
NheI	GCTAGC	1 cut(s)	1489
NlaIII	CATG	7 cut(s)	165, 1064, 1255, 1357, 1600, 1627, 1807
NlaIV	GGNNCC	1 cut(s)	411
NmeAIII	GCCGAG	1 cut(s)	1195
NmuCI	GTSAC	3 cut(s)	547, 943, 1741
NsiI	ATGCAT	1 cut(s)	1809
NspI	RCATGY	1 cut(s)	165
PaeI	GCATGC	1 cut(s)	165
PceI	AGGCCT	1 cut(s)	48
PciSI	GCTCTTC	2 cut(s)	1569, 1635
PcsI	WCGNNNNNNNCGW	1 cut(s)	1792
PdmI	GAANNNNTTC	3 cut(s)	85, 140, 1221
PfeI	GAWTC	5 cut(s)	26, 86, 1222, 1366, 1569
Pfl23II	CGTACG	1 cut(s)	1205
PflFI	GACNNNGTC	3 cut(s)	572, 1794, 1860
PflMI	CCANNNNNTGG	2 cut(s)	172, 731
PfoI	TCCNGGA	1 cut(s)	1836
PinAI	ACCGGT	1 cut(s)	400
PkrI	GCNGC	3 cut(s)	1058, 1176, 1930
PleI	GAGTC	3 cut(s)	750, 1483, 1759
PpsI	GAGTC	3 cut(s)	750, 1483, 1759
Ppu21I	YACGTR	1 cut(s)	1209
PpuMI	RGGWCCY	1 cut(s)	1297
PshBI	ATTAAT	1 cut(s)	152
Psp5II	RGGWCCY	1 cut(s)	1297
Psp6I	CCWGG	2 cut(s)	859, 1497
PspFI	CCCAGC	2 cut(s)	227, 269
PspGI	CCWGG	2 cut(s)	859, 1497
PspLI	CGTACG	1 cut(s)	1205
PspN4I	GGNNCC	1 cut(s)	411
PspPI	GGNCC	3 cut(s)	175, 215, 1297
PspPPI	RGGWCCY	1 cut(s)	1297
PstI	CTGCAG	1 cut(s)	1342
PsuI	RGATCY	2 cut(s)	532, 868
PsyI	GACNNNGTC	3 cut(s)	572, 1794, 1860
RsaI	GTAC	4 cut(s)	662, 1207, 1211, 1417
RsaNI	GTAC	4 cut(s)	661, 1206, 1210, 1416
RseI	CAYNNNNRTG	1 cut(s)	287
SapI	GCTCTTC	2 cut(s)	1569, 1635
SaqAI	TTAA	9 cut(s)	53, 75, 152, 386, 720, 792, 1047, 1362, 1700
SatI	GCNGC	3 cut(s)	1057, 1175, 1929
Sau3AI	GATC	9 cut(s)	58, 337, 483, 532, 784, 811, 868, 1144, 1959
Sau96I	GGNCC	3 cut(s)	175, 215, 1297
SchI	GAGTC	3 cut(s)	751, 1484, 1760
ScrFI	CCNGG	4 cut(s)	861, 1432, 1499, 1838
SexAI	ACCWGGT	1 cut(s)	859
SfaNI	GCATC	4 cut(s)	295, 504, 888, 1816
SfcI	CTRYAG	1 cut(s)	1338
SinI	GGWCC	2 cut(s)	215, 1297
SmiMI	CAYNNNNRTG	1 cut(s)	287
SmlI	CTYRAG	2 cut(s)	6, 1370
SmoI	CTYRAG	2 cut(s)	6, 1370
SnaBI	TACGTA	1 cut(s)	1209
SphI	GCATGC	1 cut(s)	165
Sse9I	AATT	7 cut(s)	705, 716, 789, 1092, 1359, 1582, 1720
SseBI	AGGCCT	1 cut(s)	48
SsiI	CCGC	4 cut(s)	439, 555, 782, 901
SspMI	CTAG	6 cut(s)	432, 1289, 1490, 1611, 1952, 1983
StuI	AGGCCT	1 cut(s)	48
StyD4I	CCNGG	4 cut(s)	859, 1430, 1497, 1836
StyI	CCWWGG	1 cut(s)	1020
TaaI	ACNGT	4 cut(s)	457, 649, 1694, 1918
TaiI	ACGT	4 cut(s)	526, 839, 1211, 1798
TaqI	TCGA	7 cut(s)	67, 321, 787, 873, 1120, 1567, 1572
TasI	AATT	7 cut(s)	705, 716, 789, 1092, 1359, 1582, 1720
TatI	WGTACW	2 cut(s)	660, 1415
TfiI	GAWTC	5 cut(s)	26, 86, 1222, 1366, 1569
Tru1I	TTAA	9 cut(s)	53, 75, 152, 386, 720, 792, 1047, 1362, 1700
Tru9I	TTAA	9 cut(s)	53, 75, 152, 386, 720, 792, 1047, 1362, 1700
TseFI	GTSAC	3 cut(s)	547, 943, 1741
TseI	GCWGC	3 cut(s)	1056, 1174, 1928
Tsp45I	GTSAC	3 cut(s)	547, 943, 1741
TspDTI	ATGAA	4 cut(s)	201, 1182, 1613, 1663
TspGWI	ACGGA	1 cut(s)	146
Tth111I	GACNNNGTC	3 cut(s)	572, 1794, 1860
Van91I	CCANNNNNTGG	2 cut(s)	172, 731
VpaK11BI	GGWCC	2 cut(s)	215, 1297
VspI	ATTAAT	1 cut(s)	152
XagI	CCTNNNNNAGG	1 cut(s)	1292
XapI	RAATTY	2 cut(s)	716, 1582
XceI	RCATGY	1 cut(s)	165
XmnI	GAANNNNTTC	3 cut(s)	85, 140, 1221
XspI	CTAG	6 cut(s)	432, 1289, 1490, 1611, 1952, 1983
Zsp2I	ATGCAT	1 cut(s)	1809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.