Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0014152

Physical Location & Seq

Genomic Coordinates Reverse (-)

3436980 .. 3439923

Gene Structure 2944 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGCTGCATGGCGGCGCTCTGCCAAGAACCTCGCCGCTCTTCTCCTTCTTCGTCAAAATCCCACTCCCCCTAATTTCCCGAACCTCCCGCCGTTTCTTCCGCCCAATTCTCCGCTCCCCGAAACCTAAACCGACTCTGAATTCCACGGGCAGCTTCTCCATGGACAAAAGACTCAACCTTTGCACTCTGGCTCTCTCCGATAACTCGCCCTCGCCGTCGTCACCGGCGGTTTCCAACAAAGCCAAGAAGAAAGCGCGGCGGGAATCTCCGGAGGGGGTCCTTAGGCACAAGCTAGACATGTGCTCCAGGCACGGCCAGCTGGTCCAAGCTCTGAGCCTTTACGACGAGGCCAGGAGCAATGGGGTCCCGCTTAGCCTTCACCATTACAATGTTTTGCTCTACCTTTGCTCCTCCAATGGCGGCGGTGATGACGGTGATGTGGGTTTGAAGAGGGGGTTTGAGATTTTTCGCCAGATGGTTGAGGATAAGGTTGTCCCCAATGAGGCCACTTTTACCAGCGCGGCGAGGTTGGCAATCGCGGGGGAGGACCCGGAAATGGCGTTTCATTTGGTGAAGCAGATGAAGGGTTTAGGAATTCCGCCGAAATTGAGGTCTTACGGTCCGGCATTGTTTGAGTTCTGTAAGAAGGGGGAGGCTGATAGAGCTTATGAGGTTGATGCTCACATGGTTGAATCCGGGGTTGTGGCGGAGGAACCTGAGATCACTGCTTTGATAAAAGTTAGTTCTGATTCGAGCAGAGGTGACAAGGTTTATGAGATGTTGCACCGGTTGCGGACCACGGTGAGGCAGGTCTCGGAGTCAACTTATGGGGTGGTGGAGGAGTGGTTCAAGTCCGAGGAGGCGGCGAAAGTTGGGGTGGAGACTTGGGATGTGAATAAGGTGAGGGAAGGGGTTGTGAGAGGAGGTGGAGGGTGGCATGGGCAAGGGTGGCTTGGGAGTGGGAATTGGAGAGTGGAGAGGACTCAGATGGATGAAGCAGGGACATGCTCTTGTTGCGGCGAAAAGCTTGTCTCTATCGACATTGATCCGAAAGAGACCGAGAATTTCGCTACCTCTTTGAGCAAATTGGCTAGCCAAAGGGAGGTTCGGGGTGATTTCATTCGATTCCAGGAGTGGCTTCAAAGGCATGGTCCATTCGATGCTGTTGTAGATGGTGCCAATGTTGGTCTGGTCAATCAACATAATTTCAGCTTTTTCCAGCTCGATACTCTGGTGAACAGGTTACACCAAATGAGCCCATCAAAGCGATTGCCACTTGTTATATTGCACCAAAATCGTGTAACTGGTGGTCCCGCTCAGAATCCTAATAACAAGAGATTGTTAGAGAGTTGGAAAAAGTCCGGTGCACTTTACGCTACTCCAGTTGGTTCAAATGATGATTGGTACTGGTTGTACGCTGCTGTTAATTGCAAGTGTTTGCTGGTGACGAACGATGAGATGAGAGACCACTTGTTCCAACTTCTAGGGACTAGCTTTTTCCCAAGATGGAAGGAAAAACACCAGGTTCGATTGTCCGTATCAAGGCGGGGACTTAACCTTCATATGCCACCCCCGTATTCGATTGTAATCCAGGAAGCAGAGGATGGGGAGTGGCACGTGCCAACAACCACAGGTGACGACATTGAGACCCCAAGGCAGTGGCTGTGTGCCACCAGAGCCAGAAATACCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PPR_long PRORP

Protein Analysis

565

Amino Acids

63.19

Weight (kDa)

8.85

Isoelectric Point (pI)

45.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	82 - 289	2.3e-75	Pentacotripeptide-repeat region of PRORP
PRORP	PF16953	330 - 556	4.5e-76	Protein-only RNase P

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32230 AT2G32230
fragaria_vesca	FvH4_4g29971
malus_domestica	MD13G1062300.v1.1 MD16G1060600.v1.1
prunus_persica	Prupe.1G287700_v2.0.a1
pyrus_communis	pycom16g05280
rosa_chinensis	RchiOBHm_Chr4g0438251
rosa_laevigata	RLG00000006377
rosa_multiflora	Rmu_sc0011129.1_g000009
rosa_roxburghii	Rroxscaffold_5G00379340
rosa_rugosa	Rorug04G0308300
rosa_samantha	Rh4AG359400 Rh4BG370200 Rh4DG365300
rosa_wichuraiana	Rw0G006400 Rw0G016340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	799
AccB1I	GGYRCC	1 cut(s)	1175
AccBSI	CCGCTC	3 cut(s)	37, 114, 1316
AccII	CGCG	3 cut(s)	256, 521, 539
AccIII	TCCGGA	1 cut(s)	268
AclWI	GGATC	1 cut(s)	1040
AcoI	YGGCCR	1 cut(s)	313
AcsI	RAATTY	3 cut(s)	139, 594, 1063
AcvI	CACGTG	1 cut(s)	1618
AfaI	GTAC	2 cut(s)	1406, 1415
AfiI	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
AflIII	ACRYGT	1 cut(s)	297
AgeI	ACCGGT	1 cut(s)	786
AgsI	TTSAA	5 cut(s)	448, 692, 850, 1142, 1392
AjnI	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
AjuI	GAANNNNNNNTTGG	2 cut(s)	1089, 1121
AloI	GAACNNNNNNTCC	2 cut(s)	830, 862
AluBI	AGCT	9 cut(s)	153, 292, 319, 329, 665, 1027, 1212, 1222, 1494
AluI	AGCT	9 cut(s)	153, 292, 319, 329, 665, 1027, 1212, 1222, 1494
Alw21I	GWGCWC	2 cut(s)	305, 1369
Alw26I	GTCTC	6 cut(s)	817, 875, 1036, 1049, 1458, 1640
Alw44I	GTGCAC	1 cut(s)	1365
AlwI	GGATC	1 cut(s)	1040
AlwNI	CAGNNNCTG	1 cut(s)	1663
Aor13HI	TCCGGA	1 cut(s)	268
AoxI	GGCC	3 cut(s)	313, 348, 504
ApaLI	GTGCAC	1 cut(s)	1365
ApeKI	GCWGC	3 cut(s)	4, 150, 1418
ApoI	RAATTY	3 cut(s)	139, 594, 1063
ArsI	GACNNNNNNTTYG	8 cut(s)	162, 194, 596, 628, 1014, 1046, 1135, 1167
AsiGI	ACCGGT	1 cut(s)	786
AspLEI	GCGC	3 cut(s)	17, 256, 521
AspS9I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
AsuC2I	CCSGG	2 cut(s)	551, 697
AsuNHI	GCTAGC	1 cut(s)	1091
AvaII	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
AxyI	CCTNAGG	1 cut(s)	281
BaeGI	GKGCMC	1 cut(s)	1369
BaeI	ACNNNNGTAYC	2 cut(s)	1218, 1251
BanI	GGYRCC	1 cut(s)	1175
BanII	GRGCYC	1 cut(s)	1259
BbrPI	CACGTG	1 cut(s)	1618
Bbv12I	GWGCWC	2 cut(s)	305, 1369
BbvI	GCAGC	2 cut(s)	162, 1405
BccI	CCATC	6 cut(s)	469, 982, 1166, 1267, 1500, 1598
BceAI	ACGGC	3 cut(s)	75, 199, 328
BcgI	CGANNNNNNTGC	2 cut(s)	1277, 1311
BciT130I	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
BcnI	CCSGG	2 cut(s)	551, 697
BcoDI	GTCTC	6 cut(s)	817, 875, 1036, 1049, 1458, 1640
BfaI	CTAG	4 cut(s)	293, 1092, 1484, 1491
BfoI	RGCGCY	1 cut(s)	18
BfuAI	ACCTGC	1 cut(s)	799
BlpI	GCTNAGC	1 cut(s)	371
Bme1390I	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
Bme18I	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
BmgT120I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
BmiI	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
BmrFI	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
BmsI	GCATC	2 cut(s)	667, 1150
BmtI	GCTAGC	1 cut(s)	1095
BpmI	CTGGAG	2 cut(s)	289, 1365
Bpu1102I	GCTNAGC	1 cut(s)	371
BpuMI	CCSGG	2 cut(s)	551, 697
BsaAI	YACGTR	1 cut(s)	1618
BsaBI	GATNNNNATC	1 cut(s)	1586
BsaI	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
BsaJI	CCNNGG	6 cut(s)	144, 159, 696, 798, 855, 1652
BsaWI	WCCGGW	3 cut(s)	268, 786, 1361
BsaXI	ACNNNNNCTCC	6 cut(s)	287, 317, 392, 422, 830, 860
Bsc4I	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
Bse118I	RCCGGY	2 cut(s)	223, 786
Bse1I	ACTGG	3 cut(s)	1309, 1382, 1412
Bse21I	CCTNAGG	1 cut(s)	281
Bse3DI	GCAATG	1 cut(s)	364
Bse8I	GATNNNNATC	1 cut(s)	1586
BseAI	TCCGGA	1 cut(s)	268
BseBI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
BseDI	CCNNGG	6 cut(s)	144, 159, 696, 798, 855, 1652
BseGI	GGATG	3 cut(s)	895, 997, 1609
BseJI	GATNNNNATC	1 cut(s)	1586
BseLI	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
BseMI	GCAATG	1 cut(s)	364
BseMII	CTCAG	4 cut(s)	323, 708, 998, 1331
BseNI	ACTGG	3 cut(s)	1309, 1382, 1412
BseRI	GAGGAG	4 cut(s)	400, 854, 872, 936
BseSI	GKGCMC	1 cut(s)	1369
BseXI	GCAGC	2 cut(s)	162, 1405
Bsh1236I	CGCG	3 cut(s)	256, 521, 539
BshFI	GGCC	3 cut(s)	315, 350, 506
BshNI	GGYRCC	1 cut(s)	1175
BshTI	ACCGGT	1 cut(s)	786
BsiHKAI	GWGCWC	2 cut(s)	305, 1369
BsiSI	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
BslFI	GGGAC	6 cut(s)	350, 479, 1015, 1296, 1501, 1563
BslI	CCNNNNNNNGG	5 cut(s)	502, 556, 804, 1102, 1542
BsmAI	GTCTC	6 cut(s)	817, 875, 1036, 1049, 1458, 1640
BsmFI	GGGAC	6 cut(s)	350, 479, 1015, 1296, 1501, 1563
BsnI	GGCC	3 cut(s)	315, 350, 506
Bso31I	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
Bsp1286I	GDGCHC	3 cut(s)	305, 1259, 1369
Bsp13I	TCCGGA	1 cut(s)	268
Bsp143I	GATC	2 cut(s)	720, 1045
Bsp1720I	GCTNAGC	1 cut(s)	371
Bsp19I	CCATGG	1 cut(s)	159
BspANI	GGCC	3 cut(s)	315, 350, 506
BspCNI	CTCAG	4 cut(s)	324, 709, 997, 1330
BspEI	TCCGGA	1 cut(s)	268
BspFNI	CGCG	3 cut(s)	256, 521, 539
BspLI	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
BspMI	ACCTGC	1 cut(s)	799
BspOI	GCTAGC	1 cut(s)	1095
BspPI	GGATC	1 cut(s)	1040
BspQI	GCTCTTC	1 cut(s)	44
BspT107I	GGYRCC	1 cut(s)	1175
BspTNI	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
BsrBI	CCGCTC	3 cut(s)	37, 114, 1316
BsrDI	GCAATG	1 cut(s)	364
BsrFI	RCCGGY	2 cut(s)	223, 786
BsrI	ACTGG	3 cut(s)	1309, 1382, 1412
BssAI	RCCGGY	2 cut(s)	223, 786
BssECI	CCNNGG	6 cut(s)	144, 159, 696, 798, 855, 1652
BssMI	GATC	2 cut(s)	720, 1045
BssT1I	CCWWGG	2 cut(s)	159, 1652
Bst2UI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
Bst4CI	ACNGT	3 cut(s)	434, 620, 802
Bst6I	CTCTTC	2 cut(s)	44, 443
BstAPI	GCANNNNNTGC	1 cut(s)	790
BstBAI	YACGTR	1 cut(s)	1618
BstC8I	GCNNGC	2 cut(s)	317, 1093
BstDEI	CTNAG	6 cut(s)	281, 332, 371, 717, 984, 1317
BstDSI	CCRYGG	3 cut(s)	144, 159, 798
BstF5I	GGATG	3 cut(s)	895, 997, 1609
BstFNI	CGCG	3 cut(s)	256, 521, 539
BstH2I	RGCGCY	1 cut(s)	18
BstHHI	GCGC	3 cut(s)	17, 256, 521
BstKTI	GATC	2 cut(s)	723, 1048
BstMAI	GTCTC	6 cut(s)	817, 875, 1036, 1049, 1458, 1640
BstMBI	GATC	2 cut(s)	720, 1045
BstMWI	GCNNNNNNNGC	9 cut(s)	316, 530, 662, 790, 949, 1014, 1144, 1373, 1676
BstNI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
BstNSI	RCATGY	2 cut(s)	301, 1008
BstSCI	CCNGG	7 cut(s)	305, 350, 549, 695, 1128, 1521, 1590
BstSLI	GKGCMC	1 cut(s)	1369
BstUI	CGCG	3 cut(s)	256, 521, 539
BstV1I	GCAGC	2 cut(s)	162, 1405
BstXI	CCANNNNNNTGG	1 cut(s)	1659
Bsu36I	CCTNAGG	1 cut(s)	281
BsuRI	GGCC	3 cut(s)	315, 350, 506
BtgI	CCRYGG	3 cut(s)	144, 159, 798
BtsCI	GGATG	3 cut(s)	895, 997, 1609
BtsI	GCAGTG	2 cut(s)	723, 1664
BtsIMutI	CAGTG	2 cut(s)	723, 1664
BveI	ACCTGC	1 cut(s)	799
Cac8I	GCNNGC	2 cut(s)	317, 1093
CaiI	CAGNNNCTG	1 cut(s)	1663
CfoI	GCGC	3 cut(s)	17, 256, 521
Cfr10I	RCCGGY	2 cut(s)	223, 786
Cfr13I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
CpoI	CGGWCCG	1 cut(s)	620
CsiI	ACCWGGT	1 cut(s)	1521
Csp6I	GTAC	2 cut(s)	1405, 1414
CspAI	ACCGGT	1 cut(s)	786
CspI	CGGWCCG	1 cut(s)	620
CviAII	CATG	7 cut(s)	8, 160, 298, 685, 938, 1005, 1148
CviQI	GTAC	2 cut(s)	1405, 1414
DdeI	CTNAG	6 cut(s)	281, 332, 371, 717, 984, 1317
DpnI	GATC	2 cut(s)	722, 1047
DpnII	GATC	2 cut(s)	720, 1045
EaeI	YGGCCR	1 cut(s)	313
Eam1104I	CTCTTC	2 cut(s)	44, 443
EarI	CTCTTC	2 cut(s)	44, 443
EciI	GGCGGA	3 cut(s)	89, 588, 722
Eco130I	CCWWGG	2 cut(s)	159, 1652
Eco24I	GRGCYC	1 cut(s)	1259
Eco31I	GGTCTC	4 cut(s)	817, 1049, 1458, 1640
Eco47I	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
Eco72I	CACGTG	1 cut(s)	1618
Eco81I	CCTNAGG	1 cut(s)	281
EcoO109I	RGGNCCY	3 cut(s)	277, 364, 547
EcoRI	GAATTC	2 cut(s)	139, 594
EcoRII	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
EcoT14I	CCWWGG	2 cut(s)	159, 1652
EcoT38I	GRGCYC	1 cut(s)	1259
ErhI	CCWWGG	2 cut(s)	159, 1652
FaeI	CATG	7 cut(s)	11, 163, 301, 688, 941, 1008, 1151
FalI	AAGNNNNNCTT	2 cut(s)	936, 968
FaqI	GGGAC	6 cut(s)	350, 479, 1015, 1296, 1501, 1563
FatI	CATG	7 cut(s)	7, 159, 297, 684, 937, 1004, 1147
FauI	CCCGC	6 cut(s)	95, 252, 375, 532, 1321, 1539
FauNDI	CATATG	1 cut(s)	1563
FokI	GGATG	3 cut(s)	902, 1004, 1616
FriOI	GRGCYC	1 cut(s)	1259
FspBI	CTAG	4 cut(s)	293, 1092, 1484, 1491
GlaI	GCGC	3 cut(s)	16, 255, 520
GsuI	CTGGAG	2 cut(s)	289, 1365
HaeII	RGCGCY	1 cut(s)	18
HaeIII	GGCC	3 cut(s)	315, 350, 506
HapII	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
HhaI	GCGC	3 cut(s)	17, 256, 521
Hin1II	CATG	7 cut(s)	11, 163, 301, 688, 941, 1008, 1151
Hin6I	GCGC	3 cut(s)	15, 254, 519
HinP1I	GCGC	3 cut(s)	15, 254, 519
HincII	GTYRAC	1 cut(s)	822
HindII	GTYRAC	1 cut(s)	822
HindIII	AAGCTT	1 cut(s)	1025
HinfI	GANTC	9 cut(s)	133, 171, 263, 692, 749, 818, 982, 1125, 1321
HpaII	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
Hpy166II	GTNNAC	3 cut(s)	822, 1237, 1367
Hpy188I	TCNGA	9 cut(s)	138, 199, 333, 748, 817, 856, 987, 1050, 1320
Hpy188III	TCNNGA	2 cut(s)	78, 269
Hpy8I	GTNNAC	3 cut(s)	822, 1237, 1367
Hpy99I	CGWCG	2 cut(s)	220, 347
HpyAV	CCTTC	7 cut(s)	55, 386, 577, 640, 902, 1504, 1568
HpyCH4III	ACNGT	3 cut(s)	434, 620, 802
HpyCH4IV	ACGT	1 cut(s)	1617
HpyCH4V	TGCA	6 cut(s)	7, 183, 784, 1288, 1367, 1431
HpyF10VI	GCNNNNNNNGC	9 cut(s)	316, 530, 662, 790, 949, 1014, 1144, 1373, 1676
HpyF3I	CTNAG	6 cut(s)	281, 332, 371, 717, 984, 1317
HpySE526I	ACGT	1 cut(s)	1617
Hsp92II	CATG	7 cut(s)	11, 163, 301, 688, 941, 1008, 1151
HspAI	GCGC	3 cut(s)	15, 254, 519
KflI	GGGWCCC	1 cut(s)	364
Kpn2I	TCCGGA	1 cut(s)	268
Kzo9I	GATC	2 cut(s)	720, 1045
LguI	GCTCTTC	1 cut(s)	44
LmnI	GCTCC	4 cut(s)	119, 308, 354, 413
Lsp1109I	GCAGC	2 cut(s)	162, 1405
LweI	GCATC	2 cut(s)	667, 1150
MabI	ACCWGGT	1 cut(s)	1521
MaeI	CTAG	4 cut(s)	293, 1092, 1484, 1491
MaeII	ACGT	1 cut(s)	1617
MaeIII	GTNAC	6 cut(s)	219, 761, 1242, 1300, 1444, 1634
MalI	GATC	2 cut(s)	722, 1047
MbiI	CCGCTC	3 cut(s)	37, 114, 1316
MboI	GATC	2 cut(s)	720, 1045
MboII	GAAGA	5 cut(s)	31, 40, 88, 259, 460
MhlI	GDGCHC	3 cut(s)	305, 1259, 1369
MlyI	GAGTC	4 cut(s)	127, 165, 827, 976
MmeI	TCCRAC	3 cut(s)	258, 1331, 1501
MroI	TCCGGA	1 cut(s)	268
MseI	TTAA	2 cut(s)	1425, 1554
MslI	CAYNNNNRTG	1 cut(s)	387
MspA1I	CMGCKG	1 cut(s)	319
MspI	CCGG	7 cut(s)	224, 269, 551, 623, 696, 787, 1362
MspR9I	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
MvaI	CCWGG	5 cut(s)	307, 352, 1130, 1523, 1592
MvnI	CGCG	3 cut(s)	256, 521, 539
MwoI	GCNNNNNNNGC	9 cut(s)	316, 530, 662, 790, 949, 1014, 1144, 1373, 1676
NciI	CCSGG	2 cut(s)	551, 697
NcoI	CCATGG	1 cut(s)	159
NdeI	CATATG	1 cut(s)	1563
NdeII	GATC	2 cut(s)	720, 1045
NheI	GCTAGC	1 cut(s)	1091
NlaIII	CATG	7 cut(s)	11, 163, 301, 688, 941, 1008, 1151
NlaIV	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
NmuCI	GTSAC	4 cut(s)	219, 761, 1444, 1634
NspI	RCATGY	2 cut(s)	301, 1008
PciI	ACATGT	1 cut(s)	297
PciSI	GCTCTTC	1 cut(s)	44
PcsI	WCGNNNNNNNCGW	1 cut(s)	212
PfeI	GAWTC	5 cut(s)	263, 692, 749, 1125, 1321
PfoI	TCCNGGA	2 cut(s)	1128, 1590
PinAI	ACCGGT	1 cut(s)	786
PleI	GAGTC	4 cut(s)	127, 165, 826, 976
PmaCI	CACGTG	1 cut(s)	1618
PmlI	CACGTG	1 cut(s)	1618
PpsI	GAGTC	4 cut(s)	127, 165, 826, 976
Ppu21I	YACGTR	1 cut(s)	1618
PpuMI	RGGWCCY	3 cut(s)	277, 364, 547
PscI	ACATGT	1 cut(s)	297
Psp5II	RGGWCCY	3 cut(s)	277, 364, 547
Psp6I	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
PspCI	CACGTG	1 cut(s)	1618
PspGI	CCWGG	5 cut(s)	305, 350, 1128, 1521, 1590
PspN4I	GGNNCC	7 cut(s)	278, 365, 366, 549, 714, 1177, 1312
PspPI	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
PspPPI	RGGWCCY	3 cut(s)	277, 364, 547
PstNI	CAGNNNCTG	1 cut(s)	1663
PvuII	CAGCTG	1 cut(s)	319
RsaI	GTAC	2 cut(s)	1406, 1415
RsaNI	GTAC	2 cut(s)	1405, 1414
RseI	CAYNNNNRTG	1 cut(s)	387
Rsr2I	CGGWCCG	1 cut(s)	620
RsrII	CGGWCCG	1 cut(s)	620
SapI	GCTCTTC	1 cut(s)	44
SaqAI	TTAA	2 cut(s)	1425, 1554
Sau3AI	GATC	2 cut(s)	720, 1045
Sau96I	GGNCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
SchI	GAGTC	4 cut(s)	127, 165, 827, 976
ScrFI	CCNGG	7 cut(s)	307, 352, 551, 697, 1130, 1523, 1592
SduI	GDGCHC	3 cut(s)	305, 1259, 1369
SexAI	ACCWGGT	1 cut(s)	1521
SfaNI	GCATC	2 cut(s)	667, 1150
SgrAI	CRCCGGYG	1 cut(s)	223
SinI	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
SmiMI	CAYNNNNRTG	1 cut(s)	387
SspMI	CTAG	4 cut(s)	293, 1092, 1484, 1491
StyD4I	CCNGG	7 cut(s)	305, 350, 549, 695, 1128, 1521, 1590
StyI	CCWWGG	2 cut(s)	159, 1652
TaaI	ACNGT	3 cut(s)	434, 620, 802
TaiI	ACGT	1 cut(s)	1620
TaqI	TCGA	7 cut(s)	752, 1038, 1123, 1158, 1224, 1528, 1580
TaqII	GACCGA	1 cut(s)	1073
TauI	GCSGC	7 cut(s)	15, 37, 259, 423, 524, 866, 1020
TfiI	GAWTC	5 cut(s)	263, 692, 749, 1125, 1321
Tru1I	TTAA	2 cut(s)	1425, 1554
Tru9I	TTAA	2 cut(s)	1425, 1554
TscAI	CASTG	2 cut(s)	730, 1664
TseFI	GTSAC	4 cut(s)	219, 761, 1444, 1634
TseI	GCWGC	3 cut(s)	4, 150, 1418
Tsp45I	GTSAC	4 cut(s)	219, 761, 1444, 1634
TspDTI	ATGAA	5 cut(s)	554, 596, 1008, 1108, 1550
TspGWI	ACGGA	1 cut(s)	1525
TspRI	CASTG	2 cut(s)	730, 1664
VneI	GTGCAC	1 cut(s)	1365
VpaK11BI	GGWCC	8 cut(s)	277, 322, 364, 547, 620, 795, 1151, 1310
XapI	RAATTY	3 cut(s)	139, 594, 1063
XceI	RCATGY	2 cut(s)	301, 1008
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1186
XspI	CTAG	4 cut(s)	293, 1092, 1484, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.