Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0012139

Physical Location & Seq

Genomic Coordinates Forward (+)

3555775 .. 3557777

Gene Structure 2003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGGAGAGAAATCCAACCATGGAGAAAGAAGATCAGAACAATCAGAACCAGAAAAAGAAATTTGTGTGCAAGTTTTGCAGCAAAAGGTTCCCCTGTGGGAAGTCATTGGGTGGTCACATAAGAACCCATCTGAAGATTCTGAACAAAAAACCAGCTATTCAAAAAGAAGAAGAGGAAGAAGATGATGAAATTATAGCCAACGCTGCTTCTAGGATTGTAAAATTTTCACCTTTAGATGGTGGGCATTCTGGGTATTCTCTCAGAGAAAACCCCAAGAAAACATGGAGGTTTTCGGATGCGGGCCCCAGTTTCCAGTTGCAGCAGGAGAAGGCGTGTAAAGTATGCGGCAAAGGGTTTCAGTCACTGAAAGCTCTGTGTGGTCACATGGCTTGTCACTCGGAGAAGGAGAAGCTGATGAACAAGCTTGAAGAAATCTCAGAGTTCGATGAGAAGCAGAAGCTGCTTGATGTAATGGACAGTCAGTCGGATACTGAGGCATCGGCTCTTCCGAGGCAGAGAAGGATTTCCAAAAGATTGAAGCAGCAGAATCTGGATGTTTACTCTTCTGTGGCAAATGGTGGTTCGTCATCTGGTGGTTCCGGAATCGAGCAAGAGCAGCAAGAAGTTGCTATTTGTTTGATGATGCTGTCACGCGATTCGGGTAGTAAAGGGGGTTTGAATTCGTTTGCTGAGTCTTCAGACAACAACTCTGTGGTTTTGGAGGCGAAATCATCGTCTATCGATGTGAGGATTAGTACTAAGAAAGGTATGAACCGTGCCTATAAAGTGAGTGATGTTATAGGGATGGAGAGAGCAAGAGAGAAAAAGTTCAACTGTGAGGAGATGGATGTTTCTGACAATTCTGATTCCGGGTATTTTAGACATGAACGACCTAAGAAAGTTGATTCGGAAGTTTCAGAAGATGGGTTTTTTAGGAATGGTGAATTTCACAAGGGTAGAGCAGAATTTGGATCCAGAATCGAGGGATATGAGTCCTATGATGTGAAATTAAGGAAGGGTTTTCGTGTCGAATCTGAATTGGGCAAGGATGTGTCAAATGCAGAAGATCGGAATCCTGATGAAGTGCATGGAGATAGAAGGACTTTGAAGTATGCATTGAGAAATACAACCAAGAATGGAACTTTTCACAGACCAATTGCTGATGATTCTTCCAATGTCGAACCCTGCAGAATTACACGAAAGAGCGGAAAATACAAGTGCTTGACATGTAACAAAACGTTCCATTCTCACAGGGCTCTTGGGACGCACAGAGCAAGTCACACAAAGACCACTGCTTACTCTGAGTCCCTCTATGAGAGTGGGGAAAACAGCATGGACACCGATCCCTCTCCAATTCCGACACCCGAAAGCAGCAAGCTTGCTGAGCAGCATTGCAGTGGGAAGAAACCAATGTATGATCAGGACTTCAGTGGCAGTGCAAGGAGATGTTCAGGGTCCAAGAAAAGCAAGGGGCATGAGTGTCCCTTCTGCTTCAAGGTTTTCAGGTCAGGCCAGGCTTTGGGCGGTCACAAAAGGTCACATTTTGTTGGGGGATGTGAAGTCAAAACTGTGGTACTTGGGCAGCAAGAACCTGATCGATCCCCTCCTCATGAGGCTGAAATCACAGCACTATTCGATCTCAATCTTCCAGCTCCAATGGAGGATGAAGCAAATGACCATTTTGAATACATGCATGAAACTTTTTTGGTGGGTCTCATTATCTGCAACTGTAATGATGCAAATGAAGGCAAAGTACAGGCAATGTGGTTAATTTTTTGTCTCTTTGGGTCCCATCAGTTCAAAGGATGCCTTGCAGAGGTAATGGTTGCAACTTTTAGTTTAAGGGAGTGGAAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_6

Protein Analysis

620

Amino Acids

69.48

Weight (kDa)

7.95

Isoelectric Point (pI)

50.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2H2_6	PF13912	112 - 134	1.3e-06	C2H2-type zinc finger
zf-C2H2_6	PF13912	492 - 514	3.8e-08	C2H2-type zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26610
fragaria_vesca	FvH4_4g30350
malus_domestica	MD13G1064600.v1.1 MD16G1063100.v1.1
prunus_persica	Prupe.1G283600_v2.0.a1
pyrus_communis	pycom13g05700 pycom16g05530
rosa_chinensis	RchiOBHm_Chr4g0438641
rosa_laevigata	RLG00000006345
rosa_multiflora	Rmu_co8449659.1_g000001 Rmu_sc0006646.1_g000008
rosa_roxburghii	Rroxscaffold_5G00379630
rosa_rugosa	Rorug04G0312100
rosa_samantha	Rh4AG362500 Rh4BG373900 Rh4CG387800 Rh4DG368600
rosa_wichuraiana	Rw0G007120 Rw0G016670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1519
AccBSI	CCGCTC	1 cut(s)	1206
AccII	CGCG	1 cut(s)	654
AccIII	TCCGGA	1 cut(s)	599
AciI	CCGC	4 cut(s)	299, 345, 1206, 1524
AclI	AACGTT	1 cut(s)	1238
AclWI	GGATC	4 cut(s)	966, 979, 1337, 1593
AcsI	RAATTY	5 cut(s)	59, 221, 679, 944, 965
AcuI	CTGAAG	3 cut(s)	152, 681, 1411
AfaI	GTAC	3 cut(s)	757, 1575, 1755
AfiI	CCNNNNNNNGG	3 cut(s)	236, 1519, 1816
AflIII	ACRYGT	1 cut(s)	1226
AgsI	TTSAA	9 cut(s)	161, 428, 538, 679, 832, 1108, 1495, 1685, 1801
AhdI	GACNNNNNGTC	1 cut(s)	481
AjnI	CCWGG	1 cut(s)	1512
AluBI	AGCT	7 cut(s)	155, 371, 412, 424, 460, 1378, 1652
AluI	AGCT	7 cut(s)	155, 371, 412, 424, 460, 1378, 1652
Alw26I	GTCTC	2 cut(s)	1718, 1784
AlwI	GGATC	4 cut(s)	966, 979, 1337, 1593
AlwNI	CAGNNNCTG	3 cut(s)	364, 460, 550
Aor13HI	TCCGGA	1 cut(s)	599
AoxI	GGCC	2 cut(s)	301, 1510
ApaI	GGGCCC	1 cut(s)	305
ApeKI	GCWGC	9 cut(s)	78, 203, 319, 460, 541, 616, 1371, 1387, 1582
ApoI	RAATTY	5 cut(s)	59, 221, 679, 944, 965
ArsI	GACNNNNNNTTYG	2 cut(s)	719, 751
Asp700I	GAANNNNTTC	2 cut(s)	523, 827
AspS9I	GGNCC	4 cut(s)	301, 302, 1455, 1788
AsuC2I	CCSGG	1 cut(s)	871
AsuHPI	GGTGA	2 cut(s)	219, 953
AvaII	GGWCC	2 cut(s)	1455, 1788
BaeGI	GKGCMC	1 cut(s)	305
BamHI	GGATCC	1 cut(s)	971
BanII	GRGCYC	2 cut(s)	305, 1258
BarI	GAAGNNNNNNTAC	2 cut(s)	1737, 1769
BbsI	GAAGAC	1 cut(s)	687
BbvI	GCAGC	9 cut(s)	90, 190, 331, 447, 553, 628, 1383, 1399, 1594
BccI	CCATC	6 cut(s)	135, 230, 799, 838, 917, 1800
BciT130I	CCWGG	1 cut(s)	1514
BciVI	GTATCC	1 cut(s)	481
BclI	TGATCA	1 cut(s)	1417
BcnI	CCSGG	1 cut(s)	871
BcoDI	GTCTC	2 cut(s)	1718, 1784
BfaI	CTAG	1 cut(s)	210
BfmI	CTRYAG	1 cut(s)	1186
BfuI	GTATCC	1 cut(s)	481
BlpI	GCTNAGC	1 cut(s)	1383
BmcAI	AGTACT	1 cut(s)	757
Bme1390I	CCNGG	2 cut(s)	871, 1514
Bme18I	GGWCC	2 cut(s)	1455, 1788
BmeRI	GACNNNNNGTC	1 cut(s)	481
BmgT120I	GGNCC	4 cut(s)	301, 302, 1455, 1788
BmiI	GGNNCC	8 cut(s)	89, 303, 304, 598, 973, 1456, 1789, 1790
BmrFI	CCNGG	2 cut(s)	871, 1514
BmrI	ACTGGG	1 cut(s)	300
BmsI	GCATC	5 cut(s)	286, 506, 633, 1726, 1796
BmuI	ACTGGG	1 cut(s)	300
BpiI	GAAGAC	1 cut(s)	687
Bpu1102I	GCTNAGC	1 cut(s)	1383
BpuMI	CCSGG	1 cut(s)	871
Bsa29I	ATCGAT	2 cut(s)	741, 1597
BsaBI	GATNNNNATC	2 cut(s)	1071, 1641
BsaI	GGTCTC	1 cut(s)	1718
BsaJI	CCNNGG	2 cut(s)	18, 509
BsaWI	WCCGGW	1 cut(s)	599
BsaXI	ACNNNNNCTCC	2 cut(s)	317, 347
Bsc4I	CCNNNNNNNGG	3 cut(s)	236, 1519, 1816
Bse1I	ACTGG	2 cut(s)	306, 313
Bse3DI	GCAATG	2 cut(s)	1390, 1767
Bse8I	GATNNNNATC	2 cut(s)	1071, 1641
BseAI	TCCGGA	1 cut(s)	599
BseBI	CCWGG	1 cut(s)	1514
BseCI	ATCGAT	2 cut(s)	741, 1597
BseDI	CCNNGG	2 cut(s)	18, 509
BseGI	GGATG	8 cut(s)	301, 559, 810, 853, 1054, 1559, 1669, 1811
BseJI	GATNNNNATC	2 cut(s)	1071, 1641
BseLI	CCNNNNNNNGG	3 cut(s)	236, 1519, 1816
BseMI	GCAATG	2 cut(s)	1390, 1767
BseMII	CTCAG	6 cut(s)	274, 450, 483, 681, 1293, 1374
BseNI	ACTGG	2 cut(s)	306, 313
BseRI	GAGGAG	2 cut(s)	854, 1596
BseSI	GKGCMC	1 cut(s)	305
BseXI	GCAGC	9 cut(s)	90, 190, 331, 447, 553, 628, 1383, 1399, 1594
Bsh1236I	CGCG	1 cut(s)	654
BshFI	GGCC	2 cut(s)	303, 1512
BshVI	ATCGAT	2 cut(s)	741, 1597
BsiSI	CCGG	2 cut(s)	600, 870
BslFI	GGGAC	4 cut(s)	1276, 1291, 1467, 1774
BslI	CCNNNNNNNGG	3 cut(s)	236, 1519, 1816
BsmAI	GTCTC	2 cut(s)	1718, 1784
BsmFI	GGGAC	4 cut(s)	1276, 1291, 1467, 1774
BsmI	GAATGC	1 cut(s)	244
BsnI	GGCC	2 cut(s)	303, 1512
Bso31I	GGTCTC	1 cut(s)	1718
Bsp120I	GGGCCC	1 cut(s)	301
Bsp1286I	GDGCHC	2 cut(s)	305, 1258
Bsp13I	TCCGGA	1 cut(s)	599
Bsp143I	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
Bsp1720I	GCTNAGC	1 cut(s)	1383
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	4 cut(s)	299, 345, 1206, 1524
BspANI	GGCC	2 cut(s)	303, 1512
BspCNI	CTCAG	6 cut(s)	273, 449, 484, 682, 1294, 1375
BspDI	ATCGAT	2 cut(s)	741, 1597
BspEI	TCCGGA	1 cut(s)	599
BspFNI	CGCG	1 cut(s)	654
BspHI	TCATGA	1 cut(s)	1609
BspLI	GGNNCC	8 cut(s)	89, 303, 304, 598, 973, 1456, 1789, 1790
BspMAI	CTGCAG	1 cut(s)	1190
BspPI	GGATC	4 cut(s)	966, 979, 1337, 1593
BspQI	GCTCTTC	1 cut(s)	510
BspTNI	GGTCTC	1 cut(s)	1718
BsrBI	CCGCTC	1 cut(s)	1206
BsrDI	GCAATG	2 cut(s)	1390, 1767
BsrI	ACTGG	2 cut(s)	306, 313
BssECI	CCNNGG	2 cut(s)	18, 509
BssMI	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
BssT1I	CCWWGG	1 cut(s)	18
Bst2UI	CCWGG	1 cut(s)	1514
Bst4CI	ACNGT	5 cut(s)	479, 776, 836, 1570, 1730
Bst6I	CTCTTC	3 cut(s)	165, 510, 568
BstAPI	GCANNNNNTGC	2 cut(s)	75, 460
BstC8I	GCNNGC	3 cut(s)	301, 1376, 1380
BstDEI	CTNAG	8 cut(s)	260, 436, 492, 690, 759, 894, 1302, 1383
BstDSI	CCRYGG	1 cut(s)	18
BstENI	CCTNNNNNAGG	1 cut(s)	1814
BstF5I	GGATG	8 cut(s)	301, 559, 810, 853, 1054, 1559, 1669, 1811
BstFNI	CGCG	1 cut(s)	654
BstKTI	GATC	8 cut(s)	34, 974, 1069, 1345, 1420, 1597, 1601, 1639
BstMAI	GTCTC	2 cut(s)	1718, 1784
BstMBI	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
BstMWI	GCNNNNNNNGC	5 cut(s)	75, 203, 460, 616, 1384
BstNI	CCWGG	1 cut(s)	1514
BstNSI	RCATGY	2 cut(s)	1230, 1693
BstSCI	CCNGG	2 cut(s)	869, 1512
BstSFI	CTRYAG	1 cut(s)	1186
BstSLI	GKGCMC	1 cut(s)	305
BstUI	CGCG	1 cut(s)	654
BstV1I	GCAGC	9 cut(s)	90, 190, 331, 447, 553, 628, 1383, 1399, 1594
BstV2I	GAAGAC	1 cut(s)	687
BstX2I	RGATCY	1 cut(s)	971
BstYI	RGATCY	1 cut(s)	971
Bsu15I	ATCGAT	2 cut(s)	741, 1597
BsuI	GTATCC	1 cut(s)	481
BsuRI	GGCC	2 cut(s)	303, 1512
BsuTUI	ATCGAT	2 cut(s)	741, 1597
BtgI	CCRYGG	1 cut(s)	18
BtsCI	GGATG	8 cut(s)	301, 559, 810, 853, 1054, 1559, 1669, 1811
BtsI	GCAGTG	3 cut(s)	1290, 1402, 1441
BtsIMutI	CAGTG	5 cut(s)	362, 1290, 1402, 1435, 1441
Cac8I	GCNNGC	3 cut(s)	301, 1376, 1380
CaiI	CAGNNNCTG	3 cut(s)	364, 460, 550
CciI	TCATGA	1 cut(s)	1609
Cfr13I	GGNCC	4 cut(s)	301, 302, 1455, 1788
ClaI	ATCGAT	2 cut(s)	741, 1597
CseI	GACGC	1 cut(s)	1273
Csp6I	GTAC	3 cut(s)	756, 1574, 1754
CviQI	GTAC	3 cut(s)	756, 1574, 1754
DdeI	CTNAG	8 cut(s)	260, 436, 492, 690, 759, 894, 1302, 1383
DpnI	GATC	8 cut(s)	33, 973, 1068, 1344, 1419, 1596, 1600, 1638
DpnII	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
DriI	GACNNNNNGTC	1 cut(s)	481
Eam1104I	CTCTTC	3 cut(s)	165, 510, 568
Eam1105I	GACNNNNNGTC	1 cut(s)	481
EarI	CTCTTC	3 cut(s)	165, 510, 568
Eco130I	CCWWGG	1 cut(s)	18
Eco24I	GRGCYC	2 cut(s)	305, 1258
Eco31I	GGTCTC	1 cut(s)	1718
Eco47I	GGWCC	2 cut(s)	1455, 1788
Eco57I	CTGAAG	3 cut(s)	152, 681, 1411
EcoNI	CCTNNNNNAGG	1 cut(s)	1814
EcoO109I	RGGNCCY	2 cut(s)	302, 1788
EcoRI	GAATTC	1 cut(s)	679
EcoRII	CCWGG	1 cut(s)	1512
EcoT14I	CCWWGG	1 cut(s)	18
EcoT22I	ATGCAT	2 cut(s)	1117, 1695
EcoT38I	GRGCYC	2 cut(s)	305, 1258
ErhI	CCWWGG	1 cut(s)	18
FalI	AAGNNNNNCTT	2 cut(s)	1794, 1826
FaqI	GGGAC	4 cut(s)	1276, 1291, 1467, 1774
FauI	CCCGC	1 cut(s)	292
FbaI	TGATCA	1 cut(s)	1417
FokI	GGATG	8 cut(s)	308, 566, 817, 860, 1061, 1566, 1676, 1818
FriOI	GRGCYC	2 cut(s)	305, 1258
FspBI	CTAG	1 cut(s)	210
HaeIII	GGCC	2 cut(s)	303, 1512
HapII	CCGG	2 cut(s)	600, 870
HgaI	GACGC	1 cut(s)	1273
HindIII	AAGCTT	2 cut(s)	422, 1376
HpaII	CCGG	2 cut(s)	600, 870
HphI	GGTGA	2 cut(s)	219, 953
Hpy166II	GTNNAC	1 cut(s)	559
Hpy188III	TCNNGA	6 cut(s)	551, 600, 975, 1076, 1421, 1610
Hpy8I	GTNNAC	1 cut(s)	559
HpyAV	CCTTC	7 cut(s)	322, 397, 513, 1009, 1092, 1495, 1739
HpyCH4III	ACNGT	5 cut(s)	479, 776, 836, 1570, 1730
HpyCH4IV	ACGT	1 cut(s)	1238
HpyF10VI	GCNNNNNNNGC	5 cut(s)	75, 203, 460, 616, 1384
HpyF3I	CTNAG	8 cut(s)	260, 436, 492, 690, 759, 894, 1302, 1383
HpySE526I	ACGT	1 cut(s)	1238
KflI	GGGWCCC	1 cut(s)	1788
Kpn2I	TCCGGA	1 cut(s)	599
Ksp22I	TGATCA	1 cut(s)	1417
Kzo9I	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
LguI	GCTCTTC	1 cut(s)	510
LmnI	GCTCC	1 cut(s)	1657
Lsp1109I	GCAGC	9 cut(s)	90, 190, 331, 447, 553, 628, 1383, 1399, 1594
LweI	GCATC	5 cut(s)	286, 506, 633, 1726, 1796
MaeI	CTAG	1 cut(s)	210
MaeII	ACGT	1 cut(s)	1238
MaeIII	GTNAC	9 cut(s)	113, 360, 380, 392, 648, 1229, 1277, 1526, 1536
MalI	GATC	8 cut(s)	33, 973, 1068, 1344, 1419, 1596, 1600, 1638
MbiI	CCGCTC	1 cut(s)	1206
MboI	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
MfeI	CAATTG	1 cut(s)	1155
MflI	RGATCY	1 cut(s)	971
MhlI	GDGCHC	2 cut(s)	305, 1258
MlyI	GAGTC	3 cut(s)	701, 1001, 1313
MmeI	TCCRAC	3 cut(s)	38, 465, 1382
Mph1103I	ATGCAT	2 cut(s)	1117, 1695
MroI	TCCGGA	1 cut(s)	599
MroXI	GAANNNNTTC	2 cut(s)	523, 827
MseI	TTAA	3 cut(s)	1010, 1769, 1841
MslI	CAYNNNNRTG	1 cut(s)	1395
MspI	CCGG	2 cut(s)	600, 870
MspR9I	CCNGG	2 cut(s)	871, 1514
MunI	CAATTG	1 cut(s)	1155
Mva1269I	GAATGC	1 cut(s)	244
MvaI	CCWGG	1 cut(s)	1514
MvnI	CGCG	1 cut(s)	654
MwoI	GCNNNNNNNGC	5 cut(s)	75, 203, 460, 616, 1384
NciI	CCSGG	1 cut(s)	871
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
NlaIV	GGNNCC	8 cut(s)	89, 303, 304, 598, 973, 1456, 1789, 1790
NmuCI	GTSAC	8 cut(s)	113, 360, 380, 392, 648, 1277, 1526, 1536
NsiI	ATGCAT	2 cut(s)	1117, 1695
NspI	RCATGY	2 cut(s)	1230, 1693
PagI	TCATGA	1 cut(s)	1609
PciI	ACATGT	1 cut(s)	1226
PciSI	GCTCTTC	1 cut(s)	510
PcsI	WCGNNNNNNNCGW	1 cut(s)	506
PctI	GAATGC	1 cut(s)	244
PdmI	GAANNNNTTC	2 cut(s)	523, 827
PflMI	CCANNNNNTGG	1 cut(s)	1519
PleI	GAGTC	3 cut(s)	700, 1000, 1312
PpsI	GAGTC	3 cut(s)	700, 1000, 1312
PpuMI	RGGWCCY	1 cut(s)	1788
PscI	ACATGT	1 cut(s)	1226
Psp1406I	AACGTT	1 cut(s)	1238
Psp5II	RGGWCCY	1 cut(s)	1788
Psp6I	CCWGG	1 cut(s)	1512
PspGI	CCWGG	1 cut(s)	1512
PspN4I	GGNNCC	8 cut(s)	89, 303, 304, 598, 973, 1456, 1789, 1790
PspOMI	GGGCCC	1 cut(s)	301
PspPI	GGNCC	4 cut(s)	301, 302, 1455, 1788
PspPPI	RGGWCCY	1 cut(s)	1788
PstI	CTGCAG	1 cut(s)	1190
PstNI	CAGNNNCTG	3 cut(s)	364, 460, 550
PsuI	RGATCY	1 cut(s)	971
RsaI	GTAC	3 cut(s)	757, 1575, 1755
RsaNI	GTAC	3 cut(s)	756, 1574, 1754
RseI	CAYNNNNRTG	1 cut(s)	1395
SapI	GCTCTTC	1 cut(s)	510
SaqAI	TTAA	3 cut(s)	1010, 1769, 1841
Sau3AI	GATC	8 cut(s)	31, 971, 1066, 1342, 1417, 1594, 1598, 1636
Sau96I	GGNCC	4 cut(s)	301, 302, 1455, 1788
ScaI	AGTACT	1 cut(s)	757
SchI	GAGTC	3 cut(s)	701, 1001, 1313
ScrFI	CCNGG	2 cut(s)	871, 1514
SduI	GDGCHC	2 cut(s)	305, 1258
SfaNI	GCATC	5 cut(s)	286, 506, 633, 1726, 1796
SfcI	CTRYAG	1 cut(s)	1186
SinI	GGWCC	2 cut(s)	1455, 1788
SmiMI	CAYNNNNRTG	1 cut(s)	1395
SsiI	CCGC	4 cut(s)	299, 345, 1206, 1524
SspMI	CTAG	1 cut(s)	210
StyD4I	CCNGG	2 cut(s)	869, 1512
StyI	CCWWGG	1 cut(s)	18
TaaI	ACNGT	5 cut(s)	479, 776, 836, 1570, 1730
TaiI	ACGT	1 cut(s)	1241
TaqI	TCGA	8 cut(s)	444, 606, 741, 981, 1029, 1179, 1597, 1635
TatI	WGTACW	2 cut(s)	755, 1753
TauI	GCSGC	1 cut(s)	348
Tru1I	TTAA	3 cut(s)	1010, 1769, 1841
Tru9I	TTAA	3 cut(s)	1010, 1769, 1841
TscAI	CASTG	5 cut(s)	369, 1297, 1402, 1435, 1441
TseFI	GTSAC	8 cut(s)	113, 360, 380, 392, 648, 1277, 1526, 1536
TseI	GCWGC	9 cut(s)	78, 203, 319, 460, 541, 616, 1371, 1387, 1582
Tsp45I	GTSAC	8 cut(s)	113, 360, 380, 392, 648, 1277, 1526, 1536
TspDTI	ATGAA	8 cut(s)	201, 431, 785, 900, 1095, 1680, 1710, 1758
TspRI	CASTG	5 cut(s)	369, 1297, 1402, 1435, 1441
Van91I	CCANNNNNTGG	1 cut(s)	1519
VpaK11BI	GGWCC	2 cut(s)	1455, 1788
XagI	CCTNNNNNAGG	1 cut(s)	1814
XapI	RAATTY	5 cut(s)	59, 221, 679, 944, 965
XceI	RCATGY	2 cut(s)	1230, 1693
XmnI	GAANNNNTTC	2 cut(s)	523, 827
XspI	CTAG	1 cut(s)	210
ZrmI	AGTACT	1 cut(s)	757
Zsp2I	ATGCAT	2 cut(s)	1117, 1695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.