pycom16g09390

Transferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0017288
Physical Location & Seq
Forward (+)
6295600 .. 6299409
3810 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2889 bp
ATGGAGGACAATAATGTTATTTATGCCAGCGATTGCAGACTACCAAAGTTGACTAGGGCTCACAAATATACAGTTATGGCGGCTATGGAAGTTGAAAACATATCCAGAGAAACCATCAAACCTTCCACTCCAACCCCACCACATCTTCGAACACACAAACTCTCGCTCCTCGATCAGATTAACCCTCGCTCTTATGTTCCGGTCGTTTACTTCTACCCCAAGGAAGCCTCCGATTATCGGTCTGTCGAGGATAAATCCAATCAGCTCAAGAAATCACTATCCGAAACACTGTCCAAATACTACCCTTTTGCCGGCAGGATCAGAGACAGATTCTCCATTGACTGCAACGATGAAGGAGTCGCATTTGTCAAAACGCGAATCAGAAACTTCAAGCTCTCTGACATTCTTGAGAACCCGAAAGACGAGGACCTGGCGTTATTAATCTCCGAAGATGTGGCGTGGAATGAGGATCCGGATGTCAGTGTGATCGTGGATGTTCAAGTGAGCTTCTTTGACTGCGGTGGAATGGCACTTGGCATTGGTATGTCACACAAGATAGCTGATGCATCCACCATAATCAATTTCGTCAACGACTGGGCAGCTGTGGCTCGTGATCAGTATGTACCATCCCCTGAGTTCGTCGCGGAAAATATATTTCCCCAGGCTGACCTGCCACTGTTCCCAGAAGCTGTGCCCGAGAAAAGCGATTGTGTCGCGAAAAGATTTGTGTTTGATGACACAAAGATTGCCGCCCTCAAAGCCTTAGTCGCGGATAAAGTGCAAAACCCCACGAGGGTTGAAGTTGTCGCATCGTTTATTTATAGCTGCGCAATTTCTGCGCTAAGATTGACTTCAGGGTCCTCCTCAAACCCGACTGTTCTCACTCAATCGGTGAACCTGCGCACTAGAATGGTTCCTCCGGTACCGCAAAACTCTGTAGGTTGCATGGTTTGGATATATACAGTGTCCACAGCCGAGGACAGCGTGATTGAGTTGCATGACCTGGTGGCTCAGCTGAAGCAGAATATGACCCGATTCTGTGATTCATATGCTCAAAAGTTTCGGGGGAAAGATCAATGGCCGGTGATCTTCCAAGAGTGTTTGCAAGAATCAATGGTTGAATTTTCGAGACCGAATTTGGTGATGTATAAATGTACAAGCTGCCGATCGATCACCGTCCCTAGCTGCACGACTAAGGATTGCTTTATTCTGATTGATACGAAAAATGGAGAAGGGATTGAAGCATATGTGAATTTGGAAAAGCAGCAACTGGATGTGTTTGAGCACGACGAGGAGCTTCTTGCATTTGCTTCTTTGAATCCAAACATAGATCGATCTTATTTCGTGTTAGTTTTCAAACCGTTGTGTTTGTTTCTGCTTTTGAATCTTTCCCTTGGTACTTCCCTTATTGCTGTGCTGCTTTGCTCATTTGGGTTTATTGAAATGAGTTTAGAGATAATGAAAATCTCAACCCATCAGTTCTTTATGGGTAACTCTCCGGAACATAATAGTAGTCGGCTTCAACATGTCATGCAGAGTAGGACAGAACGACGGCATCAAACCAAGACAGCTACCATGACCATGGAAGTTGAACTCATATCCAGAGAAATCATCAAACCTTCCACTCCAACCCCACCACATCTGCGAACACACAACCTTTCATTCATCGAACAGAATACTCCTCGTACTTATCTGCCGGTGGTTTACTTCTATCACAAGGAGAGCTCTGCTTCTCCTAATGGCGATCACGAATCCAATCAGCTCAAGAAATCTTTATCAGAAATACTATCCAAGTACTACCCATTCGCCGGCAGGATCAGAGACCGAGCCTCCGTTGACTGCAACGATGAAGGAGTTGCGTTTGTTGAAGCAAGAGTCAGAAACGTCAAGCTATCTGAAATTCTTGAACACCCTGAAGATACATGGCTGGACCTGTTATTCACAGACAATTTACAGTGGAATGACGATTCGAGTCTCAGCGTGATCTTTGCTGCTCAAGTAAGCTTCTTTGACTGTGGTGGCATGGCAATTGGCATCTGTATGTCACACAAAGTAGCTGACACATCCACCGTGGCCAACTTCGTCAACGACTGGGCAGCTCGAAACAAGTGTGATCAATACGTACCGTCTCCTTTGTTCATCGGAGCAGATACATTTCCCCAAGGTGACATGCCATTGTTCCCGGAAACTGTGCTCGAAAAAGGCGACAGCGTCACCAAGAGATTTGTGTTTGATGCCCTGAAGATTGCTTCCCTCAAAGCTATAGTCGCGGACAAAGTGCAAAACCCTACAAGGGTTGAAGTTGTGACAGCTTTGATTTACAGCTGTGCAATTTCTGCGTTAAGATCAACTTCACAGTCGTCCTTAAACCCGACAGTTTTCATCCATACAGTGAATCTCCGCACTAGGGTGGTCCCTCCGTTGCCGAAAAATTCTGTAGGCAGCATGATTTGGGCTTTTACATTGTCCACAGCTGAGGACAGTGTGATGGAGTTGCATGACCTGGTGACTCAAATGAAGCAGAGCATGACCCGATTTTGTGATTCTTATGCTCAAAAGTTTCGCGGGGAAGATCAATGGCCGGCAATCTTTAAAGAGTGTACGCAAGCATTAAGGAAAGAATTTTCGATAGCGAATTTGGTGACGTACAGATGTAGCAGCTGGTGCAGGTTCCCAGTGTATGAAGCTGACTTTGGCTGGGGGAAGCCAATTTGGGTGACTATTGCGAGCTGTCCCCTGAAGAATGCTATTTTTCTGATTGATACAAGGAATGGAGAAGGGATTGAAGCATATGTGAATTTGGAAAAGCAACAATTGGATGTGTTCGAGCGCGACGCGCAGCTTCTTGCATTTGCTTCTCTGAATCCGAGTGCTTTAGACTCCATATGA

Protein Analysis

963

Amino Acids

108.41

Weight (kDa)

5.47

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 29 - 433 8e-65 Transferase family
Transferase PF02458 528 - 948 1.8e-80 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017288)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g24550
malus_domestica MD16G1110600.v1.1 MD16G1110700.v1.1
pyrus_communis pycom16g09390
rosa_chinensis RchiOBHm_Chr4g0431311 RchiOBHm_Chr4g0431461
rosa_laevigata RLG00000006912
rosa_multiflora Rmu_sc0007885.1_g000012
rosa_roxburghii Rroxscaffold_5G00372910
rosa_rugosa Rorug04G0250400
rosa_samantha Rh4AG306500 Rh4DG309700
rosa_wichuraiana Rw4G026600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 856
Acc16I TGCGCA 2 cut(s) 829, 902
Acc36I ACCTGC 3 cut(s) 678, 906, 2658
Acc65I GGTACC 1 cut(s) 922
AccB1I GGYRCC 1 cut(s) 922
AccII CGCG 8 cut(s) 376, 644, 716, 770, 2270, 2565, 2832, 2837
AccIII TCCGGA 2 cut(s) 472, 1498
AciI CCGC 9 cut(s) 80, 519, 644, 750, 770, 926, 2270, 2401, 2565
AclWI GGATC 4 cut(s) 326, 464, 477, 1823
AcoI YGGCCR 3 cut(s) 1079, 2073, 2579
AcsI RAATTY 8 cut(s) 1121, 1135, 1252, 1899, 2431, 2621, 2635, 2797
AcuI CTGAAG 5 cut(s) 837, 1037, 1935, 2261, 2759
AfaI GTAC 9 cut(s) 624, 924, 1156, 1399, 1687, 1796, 2124, 2602, 2648
AfiI CCNNNNNNNGG 6 cut(s) 237, 311, 793, 1808, 2293, 2407
AflIII ACRYGT 1 cut(s) 1525
AjnI CCWGG 4 cut(s) 429, 660, 1002, 2502
AjuI GAANNNNNNNTTGG 2 cut(s) 2676, 2708
AleI CACNNNNGTG 1 cut(s) 2408
Alw21I GWGCWC 3 cut(s) 1287, 1727, 2196
Alw26I GTCTC 5 cut(s) 318, 1123, 1815, 1979, 2133
AlwI GGATC 4 cut(s) 326, 464, 477, 1823
AlwNI CAGNNNCTG 2 cut(s) 689, 1270
Ama87I CYCGRG 1 cut(s) 695
Aor13HI TCCGGA 2 cut(s) 472, 1498
AoxI GGCC 3 cut(s) 1079, 2073, 2579
ApoI RAATTY 8 cut(s) 1121, 1135, 1252, 1899, 2431, 2621, 2635, 2797
ArsI GACNNNNNNTTYG 4 cut(s) 750, 782, 2250, 2282
AseI ATTAAT 1 cut(s) 440
Asp718I GGTACC 1 cut(s) 922
AspLEI GCGC 5 cut(s) 830, 841, 903, 2832, 2839
AspS9I GGNCC 4 cut(s) 427, 858, 1930, 2413
AsuC2I CCSGG 1 cut(s) 2183
AsuHPI GGTGA 9 cut(s) 904, 1096, 1153, 1165, 2177, 2206, 2518, 2653, 2728
AsuII TTCGAA 1 cut(s) 148
AvaI CYCGRG 1 cut(s) 695
AvaII GGWCC 4 cut(s) 427, 858, 1930, 2413
BaeGI GKGCMC 1 cut(s) 696
BalI TGGCCA 1 cut(s) 2075
BamHI GGATCC 1 cut(s) 469
BanI GGYRCC 1 cut(s) 922
BanII GRGCYC 2 cut(s) 61, 1727
BauI CACGAG 2 cut(s) 609, 790
Bbv12I GWGCWC 3 cut(s) 1287, 1727, 2196
BbvCI CCTCAGC 1 cut(s) 2475
BccI CCATC 4 cut(s) 122, 634, 1482, 2482
BceAI ACGGC 1 cut(s) 1568
BciT130I CCWGG 4 cut(s) 431, 662, 1004, 2504
BclI TGATCA 2 cut(s) 613, 2113
BcnI CCSGG 1 cut(s) 2183
BcoDI GTCTC 5 cut(s) 318, 1123, 1815, 1979, 2133
BfaI CTAG 4 cut(s) 54, 906, 1182, 2406
BfmI CTRYAG 3 cut(s) 936, 2262, 2436
BfuAI ACCTGC 3 cut(s) 678, 906, 2658
BlpI GCTNAGC 1 cut(s) 1011
BmcAI AGTACT 1 cut(s) 1796
Bme1390I CCNGG 5 cut(s) 431, 662, 1004, 2183, 2504
Bme18I GGWCC 4 cut(s) 427, 858, 1930, 2413
BmeT110I CYCGRG 1 cut(s) 695
BmgT120I GGNCC 4 cut(s) 427, 858, 1930, 2413
BmiI GGNNCC 6 cut(s) 471, 859, 915, 924, 2415, 2672
BmrFI CCNGG 5 cut(s) 431, 662, 1004, 2183, 2504
BmrI ACTGGG 3 cut(s) 604, 2101, 2669
BmsI GCATC 6 cut(s) 553, 575, 818, 1564, 2043, 2224
BmuI ACTGGG 3 cut(s) 604, 2101, 2669
Bpu10I CCTNAGC 1 cut(s) 2475
Bpu1102I GCTNAGC 1 cut(s) 1011
Bpu14I TTCGAA 1 cut(s) 148
BpuEI CTTGAG 4 cut(s) 251, 428, 1748, 1980
BpuMI CCSGG 1 cut(s) 2183
Bsa29I ATCGAT 2 cut(s) 1169, 1333
BsaAI YACGTR 1 cut(s) 2122
BsaI GGTCTC 2 cut(s) 1123, 1815
BsaJI CCNNGG 7 cut(s) 219, 660, 975, 1393, 1581, 2070, 2161
BsaWI WCCGGW 4 cut(s) 199, 472, 919, 1498
BsaXI ACNNNNNCTCC 6 cut(s) 150, 180, 317, 347, 1814, 1844
Bsc4I CCNNNNNNNGG 6 cut(s) 237, 311, 793, 1808, 2293, 2407
Bse118I RCCGGY 5 cut(s) 311, 1081, 1696, 1808, 2581
Bse1I ACTGG 4 cut(s) 599, 1275, 2096, 2675
BseAI TCCGGA 2 cut(s) 472, 1498
BseBI CCWGG 4 cut(s) 431, 662, 1004, 2504
BseCI ATCGAT 2 cut(s) 1169, 1333
BseDI CCNNGG 7 cut(s) 219, 660, 975, 1393, 1581, 2070, 2161
BseGI GGATG 8 cut(s) 481, 499, 566, 626, 1279, 2063, 2382, 2824
BseLI CCNNNNNNNGG 6 cut(s) 237, 311, 793, 1808, 2293, 2407
BseMII CTCAG 4 cut(s) 624, 1025, 1990, 2466
BseNI ACTGG 4 cut(s) 599, 1275, 2096, 2675
BseRI GAGGAG 4 cut(s) 158, 853, 1307, 1671
BseSI GKGCMC 1 cut(s) 696
BseYI CCCAGC 1 cut(s) 2697
BsgI GTGCAG 2 cut(s) 1171, 2686
Bsh1236I CGCG 8 cut(s) 376, 644, 716, 770, 2270, 2565, 2832, 2837
Bsh1285I CGRYCG 2 cut(s) 204, 1169
BshFI GGCC 3 cut(s) 1081, 2075, 2581
BshNI GGYRCC 1 cut(s) 922
BshVI ATCGAT 2 cut(s) 1169, 1333
BsiEI CGRYCG 2 cut(s) 204, 1169
BsiHKAI GWGCWC 3 cut(s) 1287, 1727, 2196
BsiHKCI CYCGRG 1 cut(s) 695
BslFI GGGAC 3 cut(s) 1163, 2399, 2718
BslI CCNNNNNNNGG 6 cut(s) 237, 311, 793, 1808, 2293, 2407
BsmAI GTCTC 5 cut(s) 318, 1123, 1815, 1979, 2133
BsmBI CGTCTC 1 cut(s) 2133
BsmFI GGGAC 3 cut(s) 1163, 2399, 2718
BsmI GAATGC 1 cut(s) 2749
BsnI GGCC 3 cut(s) 1081, 2075, 2581
Bso31I GGTCTC 2 cut(s) 1123, 1815
BsoBI CYCGRG 1 cut(s) 695
Bsp119I TTCGAA 1 cut(s) 148
Bsp1286I GDGCHC 5 cut(s) 61, 696, 1287, 1727, 2196
Bsp13I TCCGGA 2 cut(s) 472, 1498
Bsp1407I TGTACA 1 cut(s) 1154
Bsp1720I GCTNAGC 1 cut(s) 1011
Bsp19I CCATGG 1 cut(s) 1581
Bsp68I TCGCGA 1 cut(s) 716
BspACI CCGC 9 cut(s) 80, 519, 644, 750, 770, 926, 2270, 2401, 2565
BspANI GGCC 3 cut(s) 1081, 2075, 2581
BspCNI CTCAG 4 cut(s) 625, 1024, 1989, 2467
BspDI ATCGAT 2 cut(s) 1169, 1333
BspEI TCCGGA 2 cut(s) 472, 1498
BspFNI CGCG 8 cut(s) 376, 644, 716, 770, 2270, 2565, 2832, 2837
BspLI GGNNCC 6 cut(s) 471, 859, 915, 924, 2415, 2672
BspMI ACCTGC 3 cut(s) 678, 906, 2658
BspPI GGATC 4 cut(s) 326, 464, 477, 1823
BspT104I TTCGAA 1 cut(s) 148
BspT107I GGYRCC 1 cut(s) 922
BspTNI GGTCTC 2 cut(s) 1123, 1815
BsrFI RCCGGY 5 cut(s) 311, 1081, 1696, 1808, 2581
BsrGI TGTACA 1 cut(s) 1154
BsrI ACTGG 4 cut(s) 599, 1275, 2096, 2675
BssAI RCCGGY 5 cut(s) 311, 1081, 1696, 1808, 2581
BssECI CCNNGG 7 cut(s) 219, 660, 975, 1393, 1581, 2070, 2161
BssSI CACGAG 2 cut(s) 609, 790
BssT1I CCWWGG 4 cut(s) 219, 1393, 1581, 2161
Bst2BI CACGAG 2 cut(s) 609, 790
Bst2UI CCWGG 4 cut(s) 431, 662, 1004, 2504
BstAPI GCANNNNNTGC 3 cut(s) 836, 2336, 2664
BstAUI TGTACA 1 cut(s) 1154
BstBAI YACGTR 1 cut(s) 2122
BstBI TTCGAA 1 cut(s) 148
BstC8I GCNNGC 6 cut(s) 28, 313, 1810, 2583, 2607, 2728
BstDEI CTNAG 7 cut(s) 633, 763, 842, 1011, 1194, 1976, 2475
BstDSI CCRYGG 2 cut(s) 1581, 2070
BstF5I GGATG 8 cut(s) 481, 499, 566, 626, 1279, 2063, 2382, 2824
BstFNI CGCG 8 cut(s) 376, 644, 716, 770, 2270, 2565, 2832, 2837
BstHHI GCGC 5 cut(s) 830, 841, 903, 2832, 2839
BstMAI GTCTC 5 cut(s) 318, 1123, 1815, 1979, 2133
BstMCI CGRYCG 2 cut(s) 204, 1169
BstMWI GCNNNNNNNGC 8 cut(s) 605, 758, 767, 836, 2267, 2336, 2664, 2836
BstNI CCWGG 4 cut(s) 431, 662, 1004, 2504
BstNSI RCATGY 2 cut(s) 1529, 2173
BstSCI CCNGG 5 cut(s) 429, 660, 1002, 2181, 2502
BstSFI CTRYAG 3 cut(s) 936, 2262, 2436
BstSLI GKGCMC 1 cut(s) 696
BstSNI TACGTA 1 cut(s) 2122
BstUI CGCG 8 cut(s) 376, 644, 716, 770, 2270, 2565, 2832, 2837
BstX2I RGATCY 1 cut(s) 469
BstXI CCANNNNNNTGG 1 cut(s) 1582
BstYI RGATCY 1 cut(s) 469
Bsu15I ATCGAT 2 cut(s) 1169, 1333
BsuRI GGCC 3 cut(s) 1081, 2075, 2581
BsuTUI ATCGAT 2 cut(s) 1169, 1333
BtgI CCRYGG 2 cut(s) 1581, 2070
BtsCI GGATG 8 cut(s) 481, 499, 566, 626, 1279, 2063, 2382, 2824
BtsIMutI CAGTG 8 cut(s) 287, 487, 674, 969, 1961, 2397, 2488, 2682
BtuMI TCGCGA 1 cut(s) 716
BveI ACCTGC 3 cut(s) 678, 906, 2658
Cac8I GCNNGC 6 cut(s) 28, 313, 1810, 2583, 2607, 2728
CaiI CAGNNNCTG 2 cut(s) 689, 1270
CfoI GCGC 5 cut(s) 830, 841, 903, 2832, 2839
Cfr10I RCCGGY 5 cut(s) 311, 1081, 1696, 1808, 2581
Cfr13I GGNCC 4 cut(s) 427, 858, 1930, 2413
ClaI ATCGAT 2 cut(s) 1169, 1333
CseI GACGC 2 cut(s) 2200, 2843
CsiI ACCWGGT 2 cut(s) 1002, 2502
Csp6I GTAC 9 cut(s) 623, 923, 1155, 1398, 1686, 1795, 2123, 2601, 2647
CspCI CAANNNNNGTGG 2 cut(s) 778, 813
CviQI GTAC 9 cut(s) 623, 923, 1155, 1398, 1686, 1795, 2123, 2601, 2647
DdeI CTNAG 7 cut(s) 633, 763, 842, 1011, 1194, 1976, 2475
DraI TTTAAA 1 cut(s) 2593
DrdI GACNNNNNNGTC 1 cut(s) 856
DseDI GACNNNNNNGTC 1 cut(s) 856
EaeI YGGCCR 3 cut(s) 1079, 2073, 2579
Ecl136II GAGCTC 1 cut(s) 1725
Eco105I TACGTA 1 cut(s) 2122
Eco130I CCWWGG 4 cut(s) 219, 1393, 1581, 2161
Eco24I GRGCYC 2 cut(s) 61, 1727
Eco31I GGTCTC 2 cut(s) 1123, 1815
Eco47I GGWCC 4 cut(s) 427, 858, 1930, 2413
Eco53kI GAGCTC 1 cut(s) 1725
Eco57I CTGAAG 5 cut(s) 837, 1037, 1935, 2261, 2759
Eco88I CYCGRG 1 cut(s) 695
EcoICRI GAGCTC 1 cut(s) 1725
EcoO109I RGGNCCY 2 cut(s) 427, 858
EcoRII CCWGG 4 cut(s) 429, 660, 1002, 2502
EcoT14I CCWWGG 4 cut(s) 219, 1393, 1581, 2161
EcoT22I ATGCAT 1 cut(s) 568
EcoT38I GRGCYC 2 cut(s) 61, 1727
ErhI CCWWGG 4 cut(s) 219, 1393, 1581, 2161
Esp3I CGTCTC 1 cut(s) 2133
FalI AAGNNNNNCTT 6 cut(s) 835, 867, 1187, 1219, 2335, 2367
FaqI GGGAC 3 cut(s) 1163, 2399, 2718
FauI CCCGC 1 cut(s) 2558
FauNDI CATATG 4 cut(s) 1048, 1246, 2791, 2885
FbaI TGATCA 2 cut(s) 613, 2113
FokI GGATG 8 cut(s) 488, 506, 553, 613, 1286, 2050, 2369, 2831
FriOI GRGCYC 2 cut(s) 61, 1727
FspBI CTAG 4 cut(s) 54, 906, 1182, 2406
FspI TGCGCA 2 cut(s) 829, 902
GlaI GCGC 5 cut(s) 829, 840, 902, 2831, 2838
GsaI CCCAGC 1 cut(s) 2701
HaeIII GGCC 3 cut(s) 1081, 2075, 2581
HgaI GACGC 2 cut(s) 2200, 2843
HhaI GCGC 5 cut(s) 830, 841, 903, 2832, 2839
Hin6I GCGC 5 cut(s) 828, 839, 901, 2830, 2837
HinP1I GCGC 5 cut(s) 828, 839, 901, 2830, 2837
HincII GTYRAC 4 cut(s) 51, 589, 1837, 2086
HindII GTYRAC 4 cut(s) 51, 589, 1837, 2086
HindIII AAGCTT 1 cut(s) 2002
HphI GGTGA 9 cut(s) 904, 1096, 1153, 1165, 2177, 2206, 2518, 2653, 2728
Hpy99I CGWCG 4 cut(s) 644, 1292, 1554, 2837
HpyAV CCTTC 6 cut(s) 132, 347, 1226, 1629, 1844, 2771
HpyCH4IV ACGT 3 cut(s) 1884, 2121, 2645
HpyF10VI GCNNNNNNNGC 8 cut(s) 605, 758, 767, 836, 2267, 2336, 2664, 2836
HpyF3I CTNAG 7 cut(s) 633, 763, 842, 1011, 1194, 1976, 2475
HpySE526I ACGT 3 cut(s) 1884, 2121, 2645
HspAI GCGC 5 cut(s) 828, 839, 901, 2830, 2837
Kpn2I TCCGGA 2 cut(s) 472, 1498
KpnI GGTACC 1 cut(s) 926
KroI GCCGGC 3 cut(s) 311, 1808, 2581
KroNI GCCGGC 3 cut(s) 313, 1810, 2583
Ksp22I TGATCA 2 cut(s) 613, 2113
LmnI GCTCC 3 cut(s) 171, 1294, 2144
LweI GCATC 6 cut(s) 553, 575, 818, 1564, 2043, 2224
MabI ACCWGGT 2 cut(s) 1002, 2502
MaeI CTAG 4 cut(s) 54, 906, 1182, 2406
MaeII ACGT 3 cut(s) 1884, 2121, 2645
MaeIII GTNAC 9 cut(s) 546, 1490, 2043, 2165, 2212, 2305, 2506, 2641, 2716
MboII GAAGA 7 cut(s) 137, 461, 1081, 1928, 2254, 2582, 2752
MfeI CAATTG 2 cut(s) 2028, 2813
MflI RGATCY 1 cut(s) 469
MhlI GDGCHC 5 cut(s) 61, 696, 1287, 1727, 2196
MlsI TGGCCA 1 cut(s) 2075
MluNI TGGCCA 1 cut(s) 2075
MlyI GAGTC 5 cut(s) 366, 1884, 1981, 2503, 2873
MmeI TCCRAC 2 cut(s) 155, 1652
Mox20I TGGCCA 1 cut(s) 2075
Mph1103I ATGCAT 1 cut(s) 568
MroI TCCGGA 2 cut(s) 472, 1498
MroNI GCCGGC 3 cut(s) 311, 1808, 2581
MscI TGGCCA 1 cut(s) 2075
MseI TTAA 6 cut(s) 180, 440, 2342, 2366, 2592, 2612
MslI CAYNNNNRTG 5 cut(s) 542, 908, 1580, 2039, 2408
Msp20I TGGCCA 1 cut(s) 2075
MspA1I CMGCKG 5 cut(s) 602, 1015, 2325, 2474, 2661
MspR9I CCNGG 5 cut(s) 431, 662, 1004, 2183, 2504
MunI CAATTG 2 cut(s) 2028, 2813
Mva1269I GAATGC 1 cut(s) 2749
MvaI CCWGG 4 cut(s) 431, 662, 1004, 2504
MvnI CGCG 8 cut(s) 376, 644, 716, 770, 2270, 2565, 2832, 2837
MwoI GCNNNNNNNGC 8 cut(s) 605, 758, 767, 836, 2267, 2336, 2664, 2836
NaeI GCCGGC 3 cut(s) 313, 1810, 2583
NciI CCSGG 1 cut(s) 2183
NcoI CCATGG 1 cut(s) 1581
NdeI CATATG 4 cut(s) 1048, 1246, 2791, 2885
NgoMIV GCCGGC 3 cut(s) 311, 1808, 2581
NlaIV GGNNCC 6 cut(s) 471, 859, 915, 924, 2415, 2672
NmeAIII GCCGAG 1 cut(s) 1000
NmuCI GTSAC 8 cut(s) 546, 2043, 2165, 2212, 2305, 2506, 2641, 2716
NruI TCGCGA 1 cut(s) 716
NsbI TGCGCA 2 cut(s) 829, 902
NsiI ATGCAT 1 cut(s) 568
NspI RCATGY 2 cut(s) 1529, 2173
NspV TTCGAA 1 cut(s) 148
OliI CACNNNNGTG 1 cut(s) 2408
PciI ACATGT 1 cut(s) 1525
PcsI WCGNNNNNNNCGW 1 cut(s) 2202
PctI GAATGC 1 cut(s) 2749
PdiI GCCGGC 3 cut(s) 313, 1810, 2583
PflFI GACNNNGTC 1 cut(s) 2210
PfoI TCCNGGA 1 cut(s) 2181
Ple19I CGATCG 1 cut(s) 1169
PleI GAGTC 5 cut(s) 365, 1883, 1980, 2503, 2873
PpsI GAGTC 5 cut(s) 365, 1883, 1980, 2503, 2873
Ppu21I YACGTR 1 cut(s) 2122
PpuMI RGGWCCY 2 cut(s) 427, 858
PscI ACATGT 1 cut(s) 1525
PshBI ATTAAT 1 cut(s) 440
Psp124BI GAGCTC 1 cut(s) 1727
Psp5II RGGWCCY 2 cut(s) 427, 858
Psp6I CCWGG 4 cut(s) 429, 660, 1002, 2502
PspFI CCCAGC 1 cut(s) 2697
PspGI CCWGG 4 cut(s) 429, 660, 1002, 2502
PspN4I GGNNCC 6 cut(s) 471, 859, 915, 924, 2415, 2672
PspPI GGNCC 4 cut(s) 427, 858, 1930, 2413
PspPPI RGGWCCY 2 cut(s) 427, 858
PstNI CAGNNNCTG 2 cut(s) 689, 1270
PsuI RGATCY 1 cut(s) 469
PsyI GACNNNGTC 1 cut(s) 2210
PvuI CGATCG 1 cut(s) 1169
PvuII CAGCTG 5 cut(s) 602, 1015, 2325, 2474, 2661
RruI TCGCGA 1 cut(s) 716
RsaI GTAC 9 cut(s) 624, 924, 1156, 1399, 1687, 1796, 2124, 2602, 2648
RsaNI GTAC 9 cut(s) 623, 923, 1155, 1398, 1686, 1795, 2123, 2601, 2647
RseI CAYNNNNRTG 5 cut(s) 542, 908, 1580, 2039, 2408
SacI GAGCTC 1 cut(s) 1727
SaqAI TTAA 6 cut(s) 180, 440, 2342, 2366, 2592, 2612
Sau96I GGNCC 4 cut(s) 427, 858, 1930, 2413
ScaI AGTACT 1 cut(s) 1796
SchI GAGTC 5 cut(s) 366, 1884, 1981, 2503, 2873
ScrFI CCNGG 5 cut(s) 431, 662, 1004, 2183, 2504
SduI GDGCHC 5 cut(s) 61, 696, 1287, 1727, 2196
SexAI ACCWGGT 2 cut(s) 1002, 2502
SfaNI GCATC 6 cut(s) 553, 575, 818, 1564, 2043, 2224
SfcI CTRYAG 3 cut(s) 936, 2262, 2436
SfuI TTCGAA 1 cut(s) 148
SinI GGWCC 4 cut(s) 427, 858, 1930, 2413
SmiMI CAYNNNNRTG 5 cut(s) 542, 908, 1580, 2039, 2408
SmlI CTYRAG 4 cut(s) 266, 407, 1763, 1995
SmoI CTYRAG 4 cut(s) 266, 407, 1763, 1995
SnaBI TACGTA 1 cut(s) 2122
SsiI CCGC 9 cut(s) 80, 519, 644, 750, 770, 926, 2270, 2401, 2565
SspMI CTAG 4 cut(s) 54, 906, 1182, 2406
SstI GAGCTC 1 cut(s) 1727
StyD4I CCNGG 5 cut(s) 429, 660, 1002, 2181, 2502
StyI CCWWGG 4 cut(s) 219, 1393, 1581, 2161
TaiI ACGT 3 cut(s) 1887, 2124, 2648
TaqII GACCGA 3 cut(s) 228, 1147, 1839
TatI WGTACW 2 cut(s) 1154, 1794
TauI GCSGC 2 cut(s) 83, 752
Tru1I TTAA 6 cut(s) 180, 440, 2342, 2366, 2592, 2612
Tru9I TTAA 6 cut(s) 180, 440, 2342, 2366, 2592, 2612
TscAI CASTG 8 cut(s) 294, 487, 681, 969, 1961, 2397, 2488, 2682
TseFI GTSAC 8 cut(s) 546, 2043, 2165, 2212, 2305, 2506, 2641, 2716
Tsp45I GTSAC 8 cut(s) 546, 2043, 2165, 2212, 2305, 2506, 2641, 2716
TspGWI ACGGA 2 cut(s) 1822, 2409
TspRI CASTG 8 cut(s) 294, 487, 681, 969, 1961, 2397, 2488, 2682
Tth111I GACNNNGTC 1 cut(s) 2210
VpaK11BI GGWCC 4 cut(s) 427, 858, 1930, 2413
VspI ATTAAT 1 cut(s) 440
XapI RAATTY 8 cut(s) 1121, 1135, 1252, 1899, 2431, 2621, 2635, 2797
XceI RCATGY 2 cut(s) 1529, 2173
XspI CTAG 4 cut(s) 54, 906, 1182, 2406
ZrmI AGTACT 1 cut(s) 1796
Zsp2I ATGCAT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.