Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0014494

Physical Location & Seq

Genomic Coordinates Forward (+)

7949766 .. 7953553

Gene Structure 3788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g11400.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGAATATCGTTAAGTATAAAGCCATCTCCAATAAAATTCCTATATTTAGGCCCCATGTGCATTCCCAAGCGAGCCAAAATGGCGGGAAAGGTTCCCGCCAAAGAGCAGAAGCCTCCTCCCTTGTGAGCCCCAGAGGCAGCGCAATTCCATATTCCGAATTGCAATTTCAGCCGCATAGAGAGAGAGAGAGAGAGAATCGCAGAGCGAGGGACGGCGGAAAGAAGTTTAATTTAAGGAAATGGCAGAGAATCATCCGTCGACGCCTGATTCGCCGACGTCAGTCGGGTTCAACACGGATCAGTTGCCTCACACGAGCCGCACCTCCGAGAACTTCTCGTCCTCCTCTTCCGACGACGAGGCCGCCGTCGACCCCGAAATCGTCCGAGATGAACCCGACGACGACCCCCTCCTTGAAGAGGAGGAGGGAGGGGATCGATCTCTTCCACGACAATTTCTTGGATGATTATCGGAGAATGGATGGACACGACCAGTACGAGTCGGTGGGGCTGGATGACTCCGTTGAGGACGAAAGGGATTTGGATCAGATCATGGCTGACCGCCGTGCCGCGGAAGTCGAGCTTGATACCCGTGACGGCGTCCACACCTCACGCAAGCTCCCCCATCTTCTCCATGACCAAGATACTGACGATGACAGCTACCGGCCTTCGAAGAGGGCAAGGGCGGATTTCAGGCCTCCGAGAAGCTACGATGATACAGATGGAATGCAGAGTTCACCCGGAAGATCACAGTCGCAGCCCGAACACTCCCGAGAGACTGATGATGACGGCGATGAGAATGATGAAGACGAAGAATTTGAAATGTATCGTGTTCAAGGAACACTCAGAGAGTGGGTTACTAGAGACGAAGTGCGAAGATTTATAGGCAAGAAATTCAAAGAGTTTTTACTCACCTATGTGAAAAAGGATCACAATGATATCGAGTGTGTGCGCCTCATTAATGAGATGGTGTTAGCCAATAAGTGTAGTCTGGAGATTGATTACAAGCAATTCATCCATGTTCATCCCAATATTGCCATTTGGTTGGCTGATGCCCCCCAGTCTGTCCTGGAAGTTATGGAAGATGTTGCCAAGAATGTTGTGTTTACTTTGCACCCCAATTACAAACGTATCCATCAAAAAATCTACGTTCGGATAACTAACTTACCTGTTTATGATCAGATTCGCAACATTAGGCAGGTCCATTTGAATACCATGATTCGTATTGGAGGGGTTGTGACCCGACGCTCTGGGGTCTTTCCCCAGTTGCAGCAAGTAAAGTATGATTGCAATAAATGTGGGGCAATCTTGGGGCCATTCTTTCAAAATTCTTATTCAGAAGTGAAAGTTGGTTCTTGCCCTGAATGCCAATCAAAAGGACCATTCAGTGTCAATATTGAGCAGACAATATACAGGAACTATCAAAAGCTTACACTCCAAGAGAGCCCTGGAATTGTCCCCGCAGGTCGGCTTCCAAGATACAAGGAAGTGATACTATTGAATGATCTAATTGATTGTGCTCGTCCAGGGGAAGAGATTGAGGTCACTGGCATTTATTCAAATAATTTTGACTTGTCTTTGAATACAAAGAACGGGTTTCCTGTATTTGCCACTGTGGTTGAAGCAAATTATATCACTAAGAAGCAAGACCTCTTTTCTGCTTACAAACTTACTCAGGAAGATAAAGAAGAGATTGAAAAGTTGTCTAAAGACCCAAGAATAGGAGAAAGGCTTATCAAGTCAATTGCGCCATCAATCTATGGTCATGAGGACATAAAGACTGCAATAGCTCTTGCCATGTTTGGAGGCCAAGAGAAGAATGTTGAGGGAAAACACAGACTAAGAGGGGATATAAATGTTCTTCTTTTAGGTGACCCTGGCACGGCGAAATCACAGTTTCTTAAGTATGTTGAAAAGACTGGGCAGAGGGCTGTGTATACTACTGGTAAAGGTGCATCTGCTGTGGGGCTCACAGCAGCTGTCCACAAGGATCCTGTTACAAGGGAGTGGACTCTTGAAGGAGGAGCGCTTGTTCTAGCTGACAAAGGAATATGTCTTATTGATGAATTTGACAAAATGAATGATCAGGATAGGGTGAGTATTCATGAAGCAATGGAGCAGCAAAGTATTAGCATATCAAAAGCTGGTCGATCGTCACTTCTCTCCAAGCACGCTGCTCTGTCATTGCAGCTGCAAACCCTGTTGGAGGAAGATATGATTCCTCTAAAACATTTGCGCAAAATGTTGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006275 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030174 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051276 GO:0060255 GO:0065007 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 map03030 map04110 map04111 map04113

Pfam Domains

Protein Families

MCM MCM2_N MCM_N MCM_OB

Protein Analysis

750

Amino Acids

85.51

Weight (kDa)

8.82

Isoelectric Point (pI)

54.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44900 AT1G44900
fragaria_vesca	FvH4_4g22180
malus_domestica	MD13G1134100.v1.1 MD16G1144700.v1.1
prunus_persica	Prupe.1G211500_v2.0.a1
pyrus_communis	pycom13g11680 pycom16g11400
rosa_chinensis	RchiOBHm_Chr4g0428411
rosa_laevigata	RLG00000007153
rosa_multiflora	Rmu_sc0004698.1_g000003
rosa_roxburghii	Rroxscaffold_5G00370080
rosa_rugosa	Rorug04G0225200
rosa_samantha	Rh4BG288100 Rh4CG303800 Rh4DG285200
rosa_wichuraiana	Rw4G024520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	280
Acc16I	TGCGCA	1 cut(s)	2234
Acc36I	ACCTGC	2 cut(s)	1186, 1451
AccI	GTMKAC	3 cut(s)	259, 368, 1934
AccII	CGCG	1 cut(s)	569
AclWI	GGATC	6 cut(s)	305, 440, 549, 933, 1982, 1995
AcsI	RAATTY	5 cut(s)	36, 812, 890, 1324, 2063
AcyI	GRCGYC	3 cut(s)	262, 277, 597
AfaI	GTAC	1 cut(s)	494
AfeI	AGCGCT	1 cut(s)	2025
AfiI	CCNNNNNNNGG	6 cut(s)	417, 568, 1464, 1718, 1879, 2203
AflII	CTTAAG	1 cut(s)	1898
AjnI	CCWGG	4 cut(s)	1065, 1444, 1522, 1873
AjuI	GAANNNNNNNTTGG	2 cut(s)	1329, 1361
AleI	CACNNNNGTG	1 cut(s)	914
AloI	GAACNNNNNNTCC	4 cut(s)	322, 354, 2013, 2045
Alw21I	GWGCWC	1 cut(s)	1519
Alw26I	GTCTC	2 cut(s)	767, 855
AlwI	GGATC	6 cut(s)	305, 440, 549, 933, 1982, 1995
AlwNI	CAGNNNCTG	1 cut(s)	1976
Ama87I	CYCGRG	1 cut(s)	768
Aor51HI	AGCGCT	1 cut(s)	2025
AoxI	GGCC	6 cut(s)	50, 359, 662, 692, 1310, 1804
ApeKI	GCWGC	8 cut(s)	138, 754, 1267, 1973, 2116, 2171, 2185, 2188
ApoI	RAATTY	5 cut(s)	36, 812, 890, 1324, 2063
ArsI	GACNNNNNNTTYG	4 cut(s)	252, 284, 797, 829
AseI	ATTAAT	1 cut(s)	957
AspLEI	GCGC	5 cut(s)	143, 951, 1747, 2026, 2235
AspS9I	GGNCC	4 cut(s)	51, 1198, 1310, 1376
AsuC2I	CCSGG	1 cut(s)	738
AsuHPI	GGTGA	4 cut(s)	726, 901, 1880, 2104
AsuII	TTCGAA	1 cut(s)	668
AvaI	CYCGRG	1 cut(s)	768
AvaII	GGWCC	2 cut(s)	1198, 1376
BaeI	ACNNNNGTAYC	2 cut(s)	1111, 1144
BamHI	GGATCC	1 cut(s)	1987
BanII	GRGCYC	3 cut(s)	131, 1445, 1968
BauI	CACGAG	1 cut(s)	312
BbsI	GAAGAC	1 cut(s)	810
Bbv12I	GWGCWC	1 cut(s)	1519
BbvI	GCAGC	8 cut(s)	150, 766, 1279, 1985, 2128, 2158, 2175, 2197
BccI	CCATC	7 cut(s)	32, 473, 630, 713, 958, 1140, 1756
BceAI	ACGGC	6 cut(s)	229, 349, 546, 610, 802, 1896
BciT130I	CCWGG	4 cut(s)	1067, 1446, 1524, 1875
BciVI	GTATCC	1 cut(s)	1139
BclI	TGATCA	2 cut(s)	1174, 2080
BcnI	CCSGG	1 cut(s)	738
BcoDI	GTCTC	2 cut(s)	767, 855
BfaI	CTAG	2 cut(s)	858, 2033
BfoI	RGCGCY	1 cut(s)	2027
BfrI	CTTAAG	1 cut(s)	1898
BfuAI	ACCTGC	2 cut(s)	1186, 1451
BfuI	GTATCC	1 cut(s)	1139
BglI	GCCNNNNNGGC	2 cut(s)	81, 135
Bme1390I	CCNGG	5 cut(s)	738, 1067, 1446, 1524, 1875
Bme18I	GGWCC	2 cut(s)	1198, 1376
BmeT110I	CYCGRG	1 cut(s)	768
BmgT120I	GGNCC	4 cut(s)	51, 1198, 1310, 1376
BmiI	GGNNCC	4 cut(s)	53, 94, 1311, 1989
BmrFI	CCNGG	5 cut(s)	738, 1067, 1446, 1524, 1875
BmrI	ACTGGG	3 cut(s)	1051, 1255, 1926
BmsI	GCATC	2 cut(s)	1039, 1961
BmuI	ACTGGG	3 cut(s)	1051, 1255, 1926
BoxI	GACNNNNGTC	1 cut(s)	280
BpiI	GAAGAC	1 cut(s)	810
BplI	GAGNNNNNCTC	2 cut(s)	319, 351
BpmI	CTGGAG	1 cut(s)	1010
Bpu14I	TTCGAA	1 cut(s)	668
BpuMI	CCSGG	1 cut(s)	738
Bsa29I	ATCGAT	1 cut(s)	435
BsaBI	GATNNNNATC	2 cut(s)	465, 540
BsaHI	GRCGYC	3 cut(s)	262, 277, 597
BsaJI	CCNNGG	4 cut(s)	567, 1444, 1523, 1873
BsaXI	ACNNNNNCTCC	6 cut(s)	600, 630, 1218, 1248, 2013, 2043
Bsc4I	CCNNNNNNNGG	6 cut(s)	417, 568, 1464, 1718, 1879, 2203
Bse118I	RCCGGY	1 cut(s)	660
Bse1I	ACTGG	6 cut(s)	490, 1057, 1261, 1549, 1921, 1945
Bse3DI	GCAATG	2 cut(s)	2115, 2180
Bse8I	GATNNNNATC	2 cut(s)	465, 540
BseBI	CCWGG	4 cut(s)	1067, 1446, 1524, 1875
BseCI	ATCGAT	1 cut(s)	435
BseDI	CCNNGG	4 cut(s)	567, 1444, 1523, 1873
BseGI	GGATG	6 cut(s)	252, 466, 484, 517, 1011, 1021
BseJI	GATNNNNATC	2 cut(s)	465, 540
BseLI	CCNNNNNNNGG	6 cut(s)	417, 568, 1464, 1718, 1879, 2203
BseMI	GCAATG	2 cut(s)	2115, 2180
BseMII	CTCAG	2 cut(s)	856, 1685
BseNI	ACTGG	6 cut(s)	490, 1057, 1261, 1549, 1921, 1945
BseRI	GAGGAG	5 cut(s)	106, 333, 433, 436, 2034
BseXI	GCAGC	8 cut(s)	150, 766, 1279, 1985, 2128, 2158, 2175, 2197
Bsh1236I	CGCG	1 cut(s)	569
Bsh1285I	CGRYCG	1 cut(s)	2150
BshFI	GGCC	6 cut(s)	52, 361, 664, 694, 1312, 1806
BshVI	ATCGAT	1 cut(s)	435
BsiEI	CGRYCG	1 cut(s)	2150
BsiHKAI	GWGCWC	1 cut(s)	1519
BsiHKCI	CYCGRG	1 cut(s)	768
BsiSI	CCGG	2 cut(s)	661, 738
BslFI	GGGAC	2 cut(s)	224, 1439
BslI	CCNNNNNNNGG	6 cut(s)	417, 568, 1464, 1718, 1879, 2203
BsmAI	GTCTC	2 cut(s)	767, 855
BsmBI	CGTCTC	1 cut(s)	855
BsmFI	GGGAC	2 cut(s)	224, 1439
BsmI	GAATGC	3 cut(s)	61, 729, 1367
BsnI	GGCC	6 cut(s)	52, 361, 664, 694, 1312, 1806
BsoBI	CYCGRG	1 cut(s)	768
Bsp119I	TTCGAA	1 cut(s)	668
Bsp1286I	GDGCHC	4 cut(s)	131, 1445, 1519, 1968
BspANI	GGCC	6 cut(s)	52, 361, 664, 694, 1312, 1806
BspCNI	CTCAG	2 cut(s)	855, 1684
BspDI	ATCGAT	1 cut(s)	435
BspFNI	CGCG	1 cut(s)	569
BspHI	TCATGA	2 cut(s)	1762, 2101
BspLI	GGNNCC	4 cut(s)	53, 94, 1311, 1989
BspMI	ACCTGC	2 cut(s)	1186, 1451
BspPI	GGATC	6 cut(s)	305, 440, 549, 933, 1982, 1995
BspT104I	TTCGAA	1 cut(s)	668
BspTI	CTTAAG	1 cut(s)	1898
BsrDI	GCAATG	2 cut(s)	2115, 2180
BsrFI	RCCGGY	1 cut(s)	660
BsrI	ACTGG	6 cut(s)	490, 1057, 1261, 1549, 1921, 1945
BssAI	RCCGGY	1 cut(s)	660
BssECI	CCNNGG	4 cut(s)	567, 1444, 1523, 1873
BssNAI	GTATAC	1 cut(s)	1935
BssNI	GRCGYC	3 cut(s)	262, 277, 597
BssSI	CACGAG	1 cut(s)	312
Bst1107I	GTATAC	1 cut(s)	1935
Bst2BI	CACGAG	1 cut(s)	312
Bst2UI	CCWGG	4 cut(s)	1067, 1446, 1524, 1875
Bst4CI	ACNGT	3 cut(s)	750, 1612, 1893
Bst6I	CTCTTC	6 cut(s)	351, 410, 446, 665, 1524, 1680
BstACI	GRCGYC	3 cut(s)	262, 277, 597
BstAFI	CTTAAG	1 cut(s)	1898
BstBI	TTCGAA	1 cut(s)	668
BstC8I	GCNNGC	3 cut(s)	73, 614, 2169
BstDEI	CTNAG	4 cut(s)	842, 1635, 1671, 1838
BstDSI	CCRYGG	1 cut(s)	567
BstEII	GGTNACC	1 cut(s)	1868
BstENI	CCTNNNNNAGG	2 cut(s)	415, 2201
BstF5I	GGATG	6 cut(s)	252, 466, 484, 517, 1011, 1021
BstFNI	CGCG	1 cut(s)	569
BstH2I	RGCGCY	1 cut(s)	2027
BstHHI	GCGC	5 cut(s)	143, 951, 1747, 2026, 2235
BstMAI	GTCTC	2 cut(s)	767, 855
BstMCI	CGRYCG	1 cut(s)	2150
BstMWI	GCNNNNNNNGC	6 cut(s)	58, 81, 135, 169, 270, 1362
BstNI	CCWGG	4 cut(s)	1067, 1446, 1524, 1875
BstPAI	GACNNNNGTC	1 cut(s)	280
BstPI	GGTNACC	1 cut(s)	1868
BstSCI	CCNGG	5 cut(s)	736, 1065, 1444, 1522, 1873
BstUI	CGCG	1 cut(s)	569
BstV1I	GCAGC	8 cut(s)	150, 766, 1279, 1985, 2128, 2158, 2175, 2197
BstV2I	GAAGAC	1 cut(s)	810
BstX2I	RGATCY	1 cut(s)	1987
BstXI	CCANNNNNNTGG	1 cut(s)	1042
BstYI	RGATCY	1 cut(s)	1987
BstZ17I	GTATAC	1 cut(s)	1935
Bsu15I	ATCGAT	1 cut(s)	435
BsuI	GTATCC	1 cut(s)	1139
BsuRI	GGCC	6 cut(s)	52, 361, 664, 694, 1312, 1806
BsuTUI	ATCGAT	1 cut(s)	435
BtgI	CCRYGG	1 cut(s)	567
BtgZI	GCGATG	1 cut(s)	804
BtsCI	GGATG	6 cut(s)	252, 466, 484, 517, 1011, 1021
BtsIMutI	CAGTG	3 cut(s)	1390, 1542, 1608
BveI	ACCTGC	2 cut(s)	1186, 1451
Cac8I	GCNNGC	3 cut(s)	73, 614, 2169
CaiI	CAGNNNCTG	1 cut(s)	1976
CciI	TCATGA	2 cut(s)	1762, 2101
CfoI	GCGC	5 cut(s)	143, 951, 1747, 2026, 2235
Cfr10I	RCCGGY	1 cut(s)	660
Cfr13I	GGNCC	4 cut(s)	51, 1198, 1310, 1376
Cfr42I	CCGCGG	1 cut(s)	570
ClaI	ATCGAT	1 cut(s)	435
CseI	GACGC	3 cut(s)	270, 586, 1251
Csp6I	GTAC	1 cut(s)	493
CspCI	CAANNNNNGTGG	4 cut(s)	1276, 1311, 1597, 1632
CviAII	CATG	8 cut(s)	56, 550, 632, 1016, 1213, 1763, 1795, 2102
CviQI	GTAC	1 cut(s)	493
DdeI	CTNAG	4 cut(s)	842, 1635, 1671, 1838
Eam1104I	CTCTTC	6 cut(s)	351, 410, 446, 665, 1524, 1680
EarI	CTCTTC	6 cut(s)	351, 410, 446, 665, 1524, 1680
EciI	GGCGGA	2 cut(s)	231, 698
Eco147I	AGGCCT	1 cut(s)	694
Eco24I	GRGCYC	3 cut(s)	131, 1445, 1968
Eco32I	GATATC	1 cut(s)	937
Eco47I	GGWCC	2 cut(s)	1198, 1376
Eco47III	AGCGCT	1 cut(s)	2025
Eco88I	CYCGRG	1 cut(s)	768
Eco91I	GGTNACC	1 cut(s)	1868
EcoNI	CCTNNNNNAGG	2 cut(s)	415, 2201
EcoO109I	RGGNCCY	1 cut(s)	51
EcoO65I	GGTNACC	1 cut(s)	1868
EcoRII	CCWGG	4 cut(s)	1065, 1444, 1522, 1873
EcoRV	GATATC	1 cut(s)	937
EcoT38I	GRGCYC	3 cut(s)	131, 1445, 1968
Esp3I	CGTCTC	1 cut(s)	855
FaeI	CATG	8 cut(s)	59, 553, 635, 1019, 1216, 1766, 1798, 2105
FalI	AAGNNNNNCTT	2 cut(s)	564, 596
FaqI	GGGAC	2 cut(s)	224, 1439
FatI	CATG	8 cut(s)	55, 549, 631, 1015, 1212, 1762, 1794, 2101
FauI	CCCGC	3 cut(s)	77, 104, 1465
FbaI	TGATCA	2 cut(s)	1174, 2080
FblI	GTMKAC	3 cut(s)	259, 368, 1934
FokI	GGATG	6 cut(s)	239, 473, 491, 524, 998, 1008
FriOI	GRGCYC	3 cut(s)	131, 1445, 1968
FspBI	CTAG	2 cut(s)	858, 2033
FspI	TGCGCA	1 cut(s)	2234
GlaI	GCGC	5 cut(s)	142, 950, 1746, 2025, 2234
GsuI	CTGGAG	1 cut(s)	1010
HaeII	RGCGCY	1 cut(s)	2027
HaeIII	GGCC	6 cut(s)	52, 361, 664, 694, 1312, 1806
HapII	CCGG	2 cut(s)	661, 738
HgaI	GACGC	3 cut(s)	270, 586, 1251
HhaI	GCGC	5 cut(s)	143, 951, 1747, 2026, 2235
Hin1I	GRCGYC	3 cut(s)	262, 277, 597
Hin1II	CATG	8 cut(s)	59, 553, 635, 1019, 1216, 1766, 1798, 2105
Hin6I	GCGC	5 cut(s)	141, 949, 1745, 2024, 2233
HinP1I	GCGC	5 cut(s)	141, 949, 1745, 2024, 2233
HincII	GTYRAC	2 cut(s)	260, 369
HindII	GTYRAC	2 cut(s)	260, 369
HindIII	AAGCTT	1 cut(s)	1424
HinfI	GANTC	9 cut(s)	196, 249, 268, 497, 515, 1180, 1216, 2008, 2215
HpaII	CCGG	2 cut(s)	661, 738
HphI	GGTGA	4 cut(s)	726, 901, 1880, 2104
Hpy166II	GTNNAC	8 cut(s)	260, 369, 601, 734, 1104, 1935, 1981, 2007
Hpy188III	TCNNGA	7 cut(s)	768, 989, 1673, 1763, 2012, 2084, 2102
Hpy8I	GTNNAC	8 cut(s)	260, 369, 601, 734, 1104, 1935, 1981, 2007
Hpy99I	CGWCG	9 cut(s)	261, 264, 279, 355, 358, 370, 400, 403, 1245
HpyAV	CCTTC	2 cut(s)	675, 2009
HpyCH4III	ACNGT	3 cut(s)	750, 1612, 1893
HpyCH4IV	ACGT	3 cut(s)	277, 1126, 1146
HpyF10VI	GCNNNNNNNGC	6 cut(s)	58, 81, 135, 169, 270, 1362
HpyF3I	CTNAG	4 cut(s)	842, 1635, 1671, 1838
HpySE526I	ACGT	3 cut(s)	277, 1126, 1146
Hsp92I	GRCGYC	3 cut(s)	262, 277, 597
Hsp92II	CATG	8 cut(s)	59, 553, 635, 1019, 1216, 1766, 1798, 2105
HspAI	GCGC	5 cut(s)	141, 949, 1745, 2024, 2233
Ksp22I	TGATCA	2 cut(s)	1174, 2080
KspI	CCGCGG	1 cut(s)	570
LmnI	GCTCC	3 cut(s)	621, 2021, 2113
Lsp1109I	GCAGC	8 cut(s)	150, 766, 1279, 1985, 2128, 2158, 2175, 2197
LweI	GCATC	2 cut(s)	1039, 1961
MaeI	CTAG	2 cut(s)	858, 2033
MaeII	ACGT	3 cut(s)	277, 1126, 1146
MaeIII	GTNAC	7 cut(s)	590, 853, 1234, 1540, 1868, 1993, 2151
MfeI	CAATTG	1 cut(s)	1740
MflI	RGATCY	1 cut(s)	1987
MhlI	GDGCHC	4 cut(s)	131, 1445, 1519, 1968
MlyI	GAGTC	3 cut(s)	506, 509, 2002
MmeI	TCCRAC	2 cut(s)	374, 2181
MseI	TTAA	6 cut(s)	12, 228, 233, 957, 1899, 2248
MslI	CAYNNNNRTG	1 cut(s)	914
MspA1I	CMGCKG	3 cut(s)	569, 1976, 2188
MspCI	CTTAAG	1 cut(s)	1898
MspI	CCGG	2 cut(s)	661, 738
MspR9I	CCNGG	5 cut(s)	738, 1067, 1446, 1524, 1875
MunI	CAATTG	1 cut(s)	1740
Mva1269I	GAATGC	3 cut(s)	61, 729, 1367
MvaI	CCWGG	4 cut(s)	1067, 1446, 1524, 1875
MvnI	CGCG	1 cut(s)	569
MwoI	GCNNNNNNNGC	6 cut(s)	58, 81, 135, 169, 270, 1362
NciI	CCSGG	1 cut(s)	738
NlaIII	CATG	8 cut(s)	59, 553, 635, 1019, 1216, 1766, 1798, 2105
NlaIV	GGNNCC	4 cut(s)	53, 94, 1311, 1989
NmuCI	GTSAC	5 cut(s)	590, 1234, 1540, 1868, 2151
NsbI	TGCGCA	1 cut(s)	2234
NspV	TTCGAA	1 cut(s)	668
OliI	CACNNNNGTG	1 cut(s)	914
PagI	TCATGA	2 cut(s)	1762, 2101
PceI	AGGCCT	1 cut(s)	694
PcsI	WCGNNNNNNNCGW	2 cut(s)	362, 492
PctI	GAATGC	3 cut(s)	61, 729, 1367
PfeI	GAWTC	6 cut(s)	196, 249, 268, 1180, 1216, 2215
PflFI	GACNNNGTC	1 cut(s)	596
PfoI	TCCNGGA	1 cut(s)	1065
Ple19I	CGATCG	1 cut(s)	2150
PleI	GAGTC	3 cut(s)	505, 509, 2002
PpsI	GAGTC	3 cut(s)	505, 509, 2002
PshAI	GACNNNNGTC	1 cut(s)	280
PshBI	ATTAAT	1 cut(s)	957
Psp6I	CCWGG	4 cut(s)	1065, 1444, 1522, 1873
PspEI	GGTNACC	1 cut(s)	1868
PspGI	CCWGG	4 cut(s)	1065, 1444, 1522, 1873
PspN4I	GGNNCC	4 cut(s)	53, 94, 1311, 1989
PspPI	GGNCC	4 cut(s)	51, 1198, 1310, 1376
PstNI	CAGNNNCTG	1 cut(s)	1976
PsuI	RGATCY	1 cut(s)	1987
PsyI	GACNNNGTC	1 cut(s)	596
PvuI	CGATCG	1 cut(s)	2150
PvuII	CAGCTG	2 cut(s)	1976, 2188
RsaI	GTAC	1 cut(s)	494
RsaNI	GTAC	1 cut(s)	493
RseI	CAYNNNNRTG	1 cut(s)	914
SacII	CCGCGG	1 cut(s)	570
SalI	GTCGAC	2 cut(s)	258, 367
SaqAI	TTAA	6 cut(s)	12, 228, 233, 957, 1899, 2248
Sau96I	GGNCC	4 cut(s)	51, 1198, 1310, 1376
SchI	GAGTC	3 cut(s)	506, 509, 2002
ScrFI	CCNGG	5 cut(s)	738, 1067, 1446, 1524, 1875
SduI	GDGCHC	4 cut(s)	131, 1445, 1519, 1968
SfaNI	GCATC	2 cut(s)	1039, 1961
Sfr303I	CCGCGG	1 cut(s)	570
SfuI	TTCGAA	1 cut(s)	668
SgrBI	CCGCGG	1 cut(s)	570
SgrDI	CGTCGACG	1 cut(s)	258
SinI	GGWCC	2 cut(s)	1198, 1376
SmiMI	CAYNNNNRTG	1 cut(s)	914
SmlI	CTYRAG	1 cut(s)	1898
SmoI	CTYRAG	1 cut(s)	1898
SseBI	AGGCCT	1 cut(s)	694
SspI	AATATT	2 cut(s)	1030, 1393
SspMI	CTAG	2 cut(s)	858, 2033
StuI	AGGCCT	1 cut(s)	694
StyD4I	CCNGG	5 cut(s)	736, 1065, 1444, 1522, 1873
TaaI	ACNGT	3 cut(s)	750, 1612, 1893
TaiI	ACGT	3 cut(s)	280, 1129, 1149
TaqI	TCGA	7 cut(s)	259, 368, 435, 576, 668, 939, 2146
TauI	GCSGC	4 cut(s)	175, 320, 364, 569
TfiI	GAWTC	6 cut(s)	196, 249, 268, 1180, 1216, 2215
Tru1I	TTAA	6 cut(s)	12, 228, 233, 957, 1899, 2248
Tru9I	TTAA	6 cut(s)	12, 228, 233, 957, 1899, 2248
TscAI	CASTG	3 cut(s)	1390, 1549, 1615
TseFI	GTSAC	5 cut(s)	590, 1234, 1540, 1868, 2151
TseI	GCWGC	8 cut(s)	138, 754, 1267, 1973, 2116, 2171, 2185, 2188
Tsp45I	GTSAC	5 cut(s)	590, 1234, 1540, 1868, 2151
TspDTI	ATGAA	9 cut(s)	17, 404, 816, 1000, 1010, 2076, 2090, 2090, 2118
TspGWI	ACGGA	3 cut(s)	245, 310, 508
TspRI	CASTG	3 cut(s)	1390, 1549, 1615
Tth111I	GACNNNGTC	1 cut(s)	596
Vha464I	CTTAAG	1 cut(s)	1898
VpaK11BI	GGWCC	2 cut(s)	1198, 1376
VspI	ATTAAT	1 cut(s)	957
XagI	CCTNNNNNAGG	2 cut(s)	415, 2201
XapI	RAATTY	5 cut(s)	36, 812, 890, 1324, 2063
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1442
XmiI	GTMKAC	3 cut(s)	259, 368, 1934
XspI	CTAG	2 cut(s)	858, 2033
ZraI	GACGTC	1 cut(s)	278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.