pycom16g16540

RNA pol II accessory factor, Cdc73 family, C-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0011953
Physical Location & Seq
Forward (+)
12443991 .. 12445523
1533 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1221 bp
ATGGACCCGCTCTCGGCCCTCCGGGACTTCACAATCCGCGGTGAGCTCGACAAGATCGTCCGGATCAACGACGAGTTCCGGTTCGGCTCCGACTACAGCTTCCCCTGCCACGCAGAGACCGCCTACCGCTCCAAGCAAGGCAATCTCTACACCCTCGAAACCCTCCTTTATTACGTCAACAACCACCATATCAAGCACACCGACTACATCCAGTGCGCCCGCACCCAGGGCATCCCCTCCGTCACTTTCCCCGACCGCAAGCCCCTCCTCGACTACCTCACCGGAAAGATCTCCTCCTCCGACTCCATCGAGTTCCTCCTCCCTCCCCAAAACGACGCCGTCCACCTCACCAAAATCTCTACCACCCTCGATTCCGCCAGCAGCGACAACGGCGATTACGACGCCTCGGATTCTAGGGTTTTTACTCAAATCGAGACGCCGGTGGACTGCATGTCGTTGATTTGCTCCAGCGAGCGCCCGTTGAAGGACCGGGAGGGATTGCTGGAGTGTAAAGGTAGGAACTTTTACGCCGTTTTGACCTCGGCGACGAAGCGAGAAGAGGAACGACAGCGTATTGAGTCCCAGCAGAGGAAGGATGGGCTGGTGGCGAAGAGTAGACTAATGGGTTCCGACGAGAGGGGCATGACCGGGTTCGGAGACGAATCGGGTTACGACCCGAACCCGAAGCCCAAATTGCACCTCAAGGGGGGTAAAATTGGGGAAGGTGTGCCCATAATTTTGGTGCCCAGTGCTTTTCAGACGCTGATCACGATTTATAATGTGAAGGAGTTTTTGGAAGATGGGGTTTATATACCCACTGATGTGAAGGTGAAGCAGATGAAAGGGGCGAAGCCGGACTGCGTGACGGTGCAGAAAAAGTTTAGCAGGGATAGGGATCGGGTGGTGACTGCTTATGAGGTTAGGGATAAGCCCTCGGCGTTGAAGGCAGAGGATTGGGACCGGGTTGTGGCGGTTTTCGTGTTGGGGAAGGAGTGGCAGTTCAAGGATTGGCCTTTCAAGGATCATGTTGAGATTTTCAATAAGATTATGGGGTTTTTCATGCGGTTCGAAGATGATAGCGTGGAGTCAGCAAAGATTGTGAAGCAGTGGAATGTGAAGATCATCTCGATTAGCAAGAATAAACGACATCAAGATAGAGCTGCGGCATTGGAGGTGTGGGACAGATTAGAAGAATTTGTGTGGTCACGATCACATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000428 GO:0000988 GO:0000989 GO:0000993 GO:0001076 GO:0001098 GO:0001099 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006325 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008023 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016070 GO:0016071 GO:0016569 GO:0016570 GO:0016571 GO:0016591 GO:0016593 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0030880 GO:0031123 GO:0031124 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0034402 GO:0034622 GO:0034641 GO:0034968 GO:0036211 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043414 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0055029 GO:0060255 GO:0061458 GO:0061695 GO:0065003 GO:0065007 GO:0070013 GO:0070063 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0140110 GO:1901360 GO:1901564 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC73_C CDC73_N

Protein Analysis

407

Amino Acids

46.5

Weight (kDa)

6.54

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC73_N PF16050 2 - 104 3.7e-20 Paf1 complex subunit CDC73 N-terminal
CDC73_C PF05179 243 - 399 3.6e-51 RNA pol II accessory factor, Cdc73 family, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011953)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22590
fragaria_vesca FvH4_4g16100 FvH4_4g16100
malus_domestica MD13G1196100.v1.1 MD16G1196600.v1.1
prunus_persica Prupe.1G016800_v2.0.a1
pyrus_communis pycom13g16820 pycom16g16540
rosa_chinensis RchiOBHm_Chr4g0415641
rosa_laevigata RLG00000008053
rosa_multiflora Rmu_sc0001194.1_g000007 Rmu_sc0004599.1_g000013
rosa_roxburghii Rroxscaffold_5G00359440
rosa_rugosa Rorug04G0136100
rosa_samantha Rh4AG196800 Rh4BG195400 Rh4CG207600 Rh4DG194700
rosa_wichuraiana Rw4G016740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 777
AasI GACNNNNNNGTC 1 cut(s) 56
AccB1I GGYRCC 1 cut(s) 742
AccBSI CCGCTC 2 cut(s) 10, 129
AccI GTMKAC 1 cut(s) 616
AccII CGCG 1 cut(s) 39
AccIII TCCGGA 1 cut(s) 60
AclWI GGATC 3 cut(s) 71, 903, 1029
AcsI RAATTY 1 cut(s) 1193
AcyI GRCGYC 3 cut(s) 336, 402, 437
AfiI CCNNNNNNNGG 7 cut(s) 13, 226, 484, 588, 636, 706, 967
AgsI TTSAA 5 cut(s) 484, 943, 1003, 1018, 1039
AhdI GACNNNNNGTC 1 cut(s) 451
AjnI CCWGG 1 cut(s) 225
AjuI GAANNNNNNNTTGG 2 cut(s) 776, 808
AleI CACNNNNGTG 1 cut(s) 821
AloI GAACNNNNNNTCC 2 cut(s) 983, 1015
AluBI AGCT 3 cut(s) 46, 99, 1160
AluI AGCT 3 cut(s) 46, 99, 1160
Alw21I GWGCWC 1 cut(s) 48
Alw26I GTCTC 3 cut(s) 110, 428, 651
AlwI GGATC 3 cut(s) 71, 903, 1029
AlwNI CAGNNNCTG 1 cut(s) 763
Aor13HI TCCGGA 1 cut(s) 60
AoxI GGCC 2 cut(s) 15, 1010
ApeKI GCWGC 2 cut(s) 381, 1160
ApoI RAATTY 1 cut(s) 1193
AspLEI GCGC 2 cut(s) 218, 477
AspS9I GGNCC 4 cut(s) 4, 16, 487, 958
AsuC2I CCSGG 4 cut(s) 23, 491, 649, 962
AsuHPI GGTGA 5 cut(s) 53, 271, 340, 841, 916
AsuII TTCGAA 1 cut(s) 1068
AvaII GGWCC 3 cut(s) 4, 487, 958
BaeGI GKGCMC 2 cut(s) 732, 747
BanI GGYRCC 1 cut(s) 742
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 48
BbvI GCAGC 2 cut(s) 393, 1147
BccI CCATC 3 cut(s) 314, 590, 794
BceAI ACGGC 3 cut(s) 323, 406, 515
BciT130I CCWGG 1 cut(s) 227
BclI TGATCA 1 cut(s) 765
BcnI CCSGG 4 cut(s) 23, 491, 649, 962
BcoDI GTCTC 3 cut(s) 110, 428, 651
BfaI CTAG 1 cut(s) 414
BfmI CTRYAG 1 cut(s) 94
BfoI RGCGCY 1 cut(s) 478
BglII AGATCT 1 cut(s) 288
BisI GCNGC 3 cut(s) 382, 1161, 1164
BlsI GCNGC 3 cut(s) 383, 1162, 1165
Bme1390I CCNGG 5 cut(s) 23, 227, 491, 649, 962
Bme18I GGWCC 3 cut(s) 4, 487, 958
BmeRI GACNNNNNGTC 1 cut(s) 451
BmgT120I GGNCC 4 cut(s) 4, 16, 487, 958
BmiI GGNNCC 5 cut(s) 6, 88, 628, 744, 959
BmrFI CCNGG 5 cut(s) 23, 227, 491, 649, 962
BmrI ACTGGG 1 cut(s) 741
BmsI GCATC 1 cut(s) 240
BmuI ACTGGG 1 cut(s) 741
BpmI CTGGAG 2 cut(s) 451, 524
Bpu14I TTCGAA 1 cut(s) 1068
BpuEI CTTGAG 1 cut(s) 686
BpuMI CCSGG 4 cut(s) 23, 491, 649, 962
BsaBI GATNNNNATC 1 cut(s) 894
BsaHI GRCGYC 3 cut(s) 336, 402, 437
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 6 cut(s) 37, 225, 226, 405, 540, 933
BsaWI WCCGGW 3 cut(s) 60, 78, 281
BsaXI ACNNNNNCTCC 2 cut(s) 983, 1013
Bsc4I CCNNNNNNNGG 7 cut(s) 13, 226, 484, 588, 636, 706, 967
Bse118I RCCGGY 1 cut(s) 439
Bse1I ACTGG 2 cut(s) 211, 747
Bse8I GATNNNNATC 1 cut(s) 894
BseAI TCCGGA 1 cut(s) 60
BseBI CCWGG 1 cut(s) 227
BseDI CCNNGG 6 cut(s) 37, 225, 226, 405, 540, 933
BseGI GGATG 3 cut(s) 207, 231, 601
BseJI GATNNNNATC 1 cut(s) 894
BseLI CCNNNNNNNGG 7 cut(s) 13, 226, 484, 588, 636, 706, 967
BseNI ACTGG 2 cut(s) 211, 747
BseRI GAGGAG 4 cut(s) 257, 283, 286, 308
BseSI GKGCMC 2 cut(s) 732, 747
BseXI GCAGC 2 cut(s) 393, 1147
BseYI CCCAGC 1 cut(s) 582
BsgI GTGCAG 1 cut(s) 890
Bsh1236I CGCG 1 cut(s) 39
Bsh1285I CGRYCG 1 cut(s) 256
BshFI GGCC 2 cut(s) 17, 1012
BshNI GGYRCC 1 cut(s) 742
BsiEI CGRYCG 1 cut(s) 256
BsiHKAI GWGCWC 1 cut(s) 48
BsiSI CCGG 9 cut(s) 22, 61, 79, 282, 440, 490, 648, 854, 961
BslFI GGGAC 4 cut(s) 38, 565, 971, 1193
BslI CCNNNNNNNGG 7 cut(s) 13, 226, 484, 588, 636, 706, 967
BsmAI GTCTC 3 cut(s) 110, 428, 651
BsmBI CGTCTC 2 cut(s) 428, 651
BsmFI GGGAC 4 cut(s) 38, 565, 971, 1193
BsnI GGCC 2 cut(s) 17, 1012
Bso31I GGTCTC 1 cut(s) 110
Bsp119I TTCGAA 1 cut(s) 1068
Bsp1286I GDGCHC 3 cut(s) 48, 732, 747
Bsp13I TCCGGA 1 cut(s) 60
Bsp143I GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
BspANI GGCC 2 cut(s) 17, 1012
BspEI TCCGGA 1 cut(s) 60
BspFNI CGCG 1 cut(s) 39
BspLI GGNNCC 5 cut(s) 6, 88, 628, 744, 959
BspPI GGATC 3 cut(s) 71, 903, 1029
BspT104I TTCGAA 1 cut(s) 1068
BspT107I GGYRCC 1 cut(s) 742
BspTNI GGTCTC 1 cut(s) 110
BsrBI CCGCTC 2 cut(s) 10, 129
BsrFI RCCGGY 1 cut(s) 439
BsrI ACTGG 2 cut(s) 211, 747
BssAI RCCGGY 1 cut(s) 439
BssECI CCNNGG 6 cut(s) 37, 225, 226, 405, 540, 933
BssMI GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
BssNI GRCGYC 3 cut(s) 336, 402, 437
Bst2UI CCWGG 1 cut(s) 227
Bst4CI ACNGT 1 cut(s) 868
Bst6I CTCTTC 2 cut(s) 552, 605
BstACI GRCGYC 3 cut(s) 336, 402, 437
BstBI TTCGAA 1 cut(s) 1068
BstC8I GCNNGC 4 cut(s) 220, 260, 379, 473
BstDSI CCRYGG 1 cut(s) 37
BstF5I GGATG 3 cut(s) 207, 231, 601
BstFNI CGCG 1 cut(s) 39
BstH2I RGCGCY 1 cut(s) 478
BstHHI GCGC 2 cut(s) 218, 477
BstKTI GATC 8 cut(s) 57, 66, 291, 768, 898, 1024, 1122, 1211
BstMAI GTCTC 3 cut(s) 110, 428, 651
BstMBI GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
BstMCI CGRYCG 1 cut(s) 256
BstMWI GCNNNNNNNGC 6 cut(s) 105, 119, 228, 390, 694, 944
BstNI CCWGG 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 454
BstSCI CCNGG 5 cut(s) 21, 225, 489, 647, 960
BstSFI CTRYAG 1 cut(s) 94
BstSLI GKGCMC 2 cut(s) 732, 747
BstUI CGCG 1 cut(s) 39
BstV1I GCAGC 2 cut(s) 393, 1147
BstX2I RGATCY 1 cut(s) 288
BstXI CCANNNNNNTGG 1 cut(s) 739
BstYI RGATCY 1 cut(s) 288
BsuRI GGCC 2 cut(s) 17, 1012
BtgI CCRYGG 1 cut(s) 37
BtsCI GGATG 3 cut(s) 207, 231, 601
BtsI GCAGTG 1 cut(s) 1112
BtsIMutI CAGTG 4 cut(s) 218, 754, 816, 1112
Cac8I GCNNGC 4 cut(s) 220, 260, 379, 473
CaiI CAGNNNCTG 1 cut(s) 763
CfoI GCGC 2 cut(s) 218, 477
Cfr10I RCCGGY 1 cut(s) 439
Cfr13I GGNCC 4 cut(s) 4, 16, 487, 958
Cfr42I CCGCGG 1 cut(s) 40
CseI GACGC 4 cut(s) 344, 410, 445, 769
CviAII CATG 4 cut(s) 451, 643, 1025, 1060
DpnI GATC 8 cut(s) 56, 65, 290, 767, 897, 1023, 1121, 1210
DpnII GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
DrdI GACNNNNNNGTC 1 cut(s) 56
DriI GACNNNNNGTC 1 cut(s) 451
DseDI GACNNNNNNGTC 1 cut(s) 56
Eam1104I CTCTTC 2 cut(s) 552, 605
Eam1105I GACNNNNNGTC 1 cut(s) 451
EarI CTCTTC 2 cut(s) 552, 605
EciI GGCGGA 1 cut(s) 364
Ecl136II GAGCTC 1 cut(s) 46
Eco24I GRGCYC 1 cut(s) 48
Eco31I GGTCTC 1 cut(s) 110
Eco47I GGWCC 3 cut(s) 4, 487, 958
Eco53kI GAGCTC 1 cut(s) 46
EcoICRI GAGCTC 1 cut(s) 46
EcoRII CCWGG 1 cut(s) 225
EcoT38I GRGCYC 1 cut(s) 48
Esp3I CGTCTC 2 cut(s) 428, 651
FaeI CATG 4 cut(s) 454, 646, 1028, 1063
FaqI GGGAC 4 cut(s) 38, 565, 971, 1193
FatI CATG 4 cut(s) 450, 642, 1024, 1059
FauI CCCGC 2 cut(s) 15, 227
FbaI TGATCA 1 cut(s) 765
FblI GTMKAC 1 cut(s) 616
Fnu4HI GCNGC 3 cut(s) 382, 1161, 1164
FokI GGATG 3 cut(s) 194, 218, 608
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 3 cut(s) 382, 1161, 1164
FspBI CTAG 1 cut(s) 414
GlaI GCGC 2 cut(s) 217, 476
GluI GCNGC 3 cut(s) 382, 1161, 1164
GsaI CCCAGC 1 cut(s) 586
GsuI CTGGAG 2 cut(s) 451, 524
HaeII RGCGCY 1 cut(s) 478
HaeIII GGCC 2 cut(s) 17, 1012
HapII CCGG 9 cut(s) 22, 61, 79, 282, 440, 490, 648, 854, 961
HgaI GACGC 4 cut(s) 344, 410, 445, 769
HhaI GCGC 2 cut(s) 218, 477
Hin1I GRCGYC 3 cut(s) 336, 402, 437
Hin1II CATG 4 cut(s) 454, 646, 1028, 1063
Hin6I GCGC 2 cut(s) 216, 475
HinP1I GCGC 2 cut(s) 216, 475
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HinfI GANTC 6 cut(s) 302, 371, 410, 578, 662, 1085
HpaII CCGG 9 cut(s) 22, 61, 79, 282, 440, 490, 648, 854, 961
HphI GGTGA 5 cut(s) 53, 271, 340, 841, 916
Hpy166II GTNNAC 4 cut(s) 178, 343, 445, 617
Hpy188I TCNGA 6 cut(s) 91, 301, 409, 631, 656, 759
Hpy188III TCNNGA 7 cut(s) 61, 433, 769, 1126, 1151, 1206, 1218
Hpy8I GTNNAC 4 cut(s) 178, 343, 445, 617
Hpy99I CGWCG 5 cut(s) 74, 338, 404, 550, 635
HpyAV CCTTC 7 cut(s) 478, 586, 716, 778, 820, 937, 982
HpyCH4III ACNGT 1 cut(s) 868
HpyCH4IV ACGT 1 cut(s) 174
HpyCH4V TGCA 3 cut(s) 450, 697, 871
HpyF10VI GCNNNNNNNGC 6 cut(s) 105, 119, 228, 390, 694, 944
HpySE526I ACGT 1 cut(s) 174
Hsp92I GRCGYC 3 cut(s) 336, 402, 437
Hsp92II CATG 4 cut(s) 454, 646, 1028, 1063
HspAI GCGC 2 cut(s) 216, 475
Kpn2I TCCGGA 1 cut(s) 60
Ksp22I TGATCA 1 cut(s) 765
KspI CCGCGG 1 cut(s) 40
Kzo9I GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
LmnI GCTCC 3 cut(s) 92, 134, 470
Lsp1109I GCAGC 2 cut(s) 393, 1147
LweI GCATC 1 cut(s) 240
MaeI CTAG 1 cut(s) 414
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 5 cut(s) 241, 668, 862, 904, 1203
MalI GATC 8 cut(s) 56, 65, 290, 767, 897, 1023, 1121, 1210
MbiI CCGCTC 2 cut(s) 10, 129
MboI GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
MboII GAAGA 6 cut(s) 569, 622, 809, 1082, 1129, 1202
MflI RGATCY 1 cut(s) 288
MhlI GDGCHC 3 cut(s) 48, 732, 747
MluCI AATT 4 cut(s) 692, 714, 735, 1193
MlyI GAGTC 3 cut(s) 296, 587, 1094
MmeI TCCRAC 3 cut(s) 114, 324, 654
MroI TCCGGA 1 cut(s) 60
MslI CAYNNNNRTG 1 cut(s) 821
MspA1I CMGCKG 1 cut(s) 39
MspI CCGG 9 cut(s) 22, 61, 79, 282, 440, 490, 648, 854, 961
MspR9I CCNGG 5 cut(s) 23, 227, 491, 649, 962
MvaI CCWGG 1 cut(s) 227
MvnI CGCG 1 cut(s) 39
MwoI GCNNNNNNNGC 6 cut(s) 105, 119, 228, 390, 694, 944
NciI CCSGG 4 cut(s) 23, 491, 649, 962
NdeII GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
NlaIII CATG 4 cut(s) 454, 646, 1028, 1063
NlaIV GGNNCC 5 cut(s) 6, 88, 628, 744, 959
NmeAIII GCCGAG 2 cut(s) 521, 914
NmuCI GTSAC 4 cut(s) 241, 862, 904, 1203
NspI RCATGY 1 cut(s) 454
NspV TTCGAA 1 cut(s) 1068
OliI CACNNNNGTG 1 cut(s) 821
PasI CCCWGGG 1 cut(s) 226
PcsI WCGNNNNNNNCGW 3 cut(s) 54, 396, 767
PfeI GAWTC 3 cut(s) 371, 410, 662
PflFI GACNNNGTC 1 cut(s) 338
PfoI TCCNGGA 1 cut(s) 21
PkrI GCNGC 3 cut(s) 383, 1162, 1165
PleI GAGTC 3 cut(s) 296, 586, 1093
PpsI GAGTC 3 cut(s) 296, 586, 1093
PsiI TTATAA 1 cut(s) 777
Psp124BI GAGCTC 1 cut(s) 48
Psp6I CCWGG 1 cut(s) 225
PspFI CCCAGC 1 cut(s) 582
PspGI CCWGG 1 cut(s) 225
PspN4I GGNNCC 5 cut(s) 6, 88, 628, 744, 959
PspPI GGNCC 4 cut(s) 4, 16, 487, 958
PstNI CAGNNNCTG 1 cut(s) 763
PsuI RGATCY 1 cut(s) 288
PsyI GACNNNGTC 1 cut(s) 338
RseI CAYNNNNRTG 1 cut(s) 821
SacI GAGCTC 1 cut(s) 48
SacII CCGCGG 1 cut(s) 40
SatI GCNGC 3 cut(s) 382, 1161, 1164
Sau3AI GATC 8 cut(s) 54, 63, 288, 765, 895, 1021, 1119, 1208
Sau96I GGNCC 4 cut(s) 4, 16, 487, 958
SchI GAGTC 3 cut(s) 296, 587, 1094
ScrFI CCNGG 5 cut(s) 23, 227, 491, 649, 962
SduI GDGCHC 3 cut(s) 48, 732, 747
SfaNI GCATC 1 cut(s) 240
SfcI CTRYAG 1 cut(s) 94
Sfr303I CCGCGG 1 cut(s) 40
SfuI TTCGAA 1 cut(s) 1068
SgrAI CRCCGGYG 1 cut(s) 439
SgrBI CCGCGG 1 cut(s) 40
SinI GGWCC 3 cut(s) 4, 487, 958
SmiMI CAYNNNNRTG 1 cut(s) 821
SmlI CTYRAG 1 cut(s) 701
SmoI CTYRAG 1 cut(s) 701
Sse9I AATT 4 cut(s) 692, 714, 735, 1193
SspMI CTAG 1 cut(s) 414
SstI GAGCTC 1 cut(s) 48
StyD4I CCNGG 5 cut(s) 21, 225, 489, 647, 960
TaaI ACNGT 1 cut(s) 868
TaiI ACGT 1 cut(s) 177
TaqI TCGA 8 cut(s) 48, 156, 270, 309, 369, 432, 1068, 1127
TasI AATT 4 cut(s) 692, 714, 735, 1193
TauI GCSGC 1 cut(s) 1166
TfiI GAWTC 3 cut(s) 371, 410, 662
TscAI CASTG 4 cut(s) 218, 754, 823, 1112
TseFI GTSAC 4 cut(s) 241, 862, 904, 1203
TseI GCWGC 2 cut(s) 381, 1160
Tsp45I GTSAC 4 cut(s) 241, 862, 904, 1203
TspDTI ATGAA 2 cut(s) 854, 1048
TspGWI ACGGA 1 cut(s) 229
TspRI CASTG 4 cut(s) 218, 754, 823, 1112
Tth111I GACNNNGTC 1 cut(s) 338
VpaK11BI GGWCC 3 cut(s) 4, 487, 958
XapI RAATTY 1 cut(s) 1193
XceI RCATGY 1 cut(s) 454
XmiI GTMKAC 1 cut(s) 616
XspI CTAG 1 cut(s) 414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.