Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0014583

Physical Location & Seq

Genomic Coordinates Forward (+)

20365154 .. 20366884

Gene Structure 1731 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGAAGGTACTCTCTTTCCATCTCGACCTCTGTATCCCATCCCATCAAACAGACCAACGCAGCCAAACCCTCCTGTGAAATTCAATTCAACGATGCTGCCACCGCCTCCTCAGTCGCCAGCTCCGCCGTTTCCTATAGACTCCCTCCTCCAGCACCTCCTGAGCCTCTCCTCGCCGCCCAACACTCCCCACAAGCTCAAACCCTTAAACCCACCTCACCAAACCAATGGCAGTCTCCTTTCTCTTCAAATTTCGGCGGATTCGACCTCCAAACAGCATCAAATGAAGAAACCCACTTCAGTTTTAGTCCCAAATTTCGAGGACGATCGAGAGCTGCTGAAATCAGGAGATGGGGTTCTCGACTTTTTGACTATAAAGGGTAAGTTGATGTTCAATTCCATTGTAGAGCAGCCTTTGCATGGTTTGGACCATTACTTTGGTTCTGTGAAGTTTGAGTTACTTGAAGTTGATTTGATTAGTTTGTTGAAAGCATTAGACCTTTCTGGCAATTGGGAAAGAGCCTTTTTGTTGTTTGAATGGATTCTGTCCAACTTAAGCTCTGAAAATTTAAAATTAAATGGCCAGATGATTGAGCTAATGGTTAGAATTCTTGGGAGAGAGTCGCAGCATACGATTGCATCGAAGCTGTTTGATGTAATTCCCATAGAAGAATACACGCTGGATGTCCGAGCTTACACGACGATCCTTCATGCGCACTCTCGTACTGGTAAGTACGAAAGTGCAATTGACTTGTTTGAAAAAATGGTGGAAATTGGAATCTCACCAACTTTGGTCACATACAATGTCATGCTTGATGTTTATGGGAAGATGGGTCGATCTTGGGATAAGATTTTAGGCCTCTTGGATGAGATGAGGGGCAAGGGATTTGAATTTGATGAGTTCACTTGTAGTACGGTGATATCTGCCTGTGGAAGAGAGGGTTTGTTGAATGAAGCAAATGAATTCTTTATTGGATTAAAGTCACAAGGGTATGTACCCGGAACTGTAACCTATAATGCGCTGTTACAAGTTTTTGGCAAGGCAGGGGTATTTACAGAAGCCTTGAGCATATTAAAAGAAATGGAGGATAATAATTGCCCACCTGATGCTGTTACTTACAATGAGCTTGTGGCAGCTTATGTGAGGGCAGGATTCTCCGAGGAAGGTGCATCTGTCATAGAGACGATGACCCAAAAAGGAACAATGCCAAATGCTGTTACGTACACAACTGTGATAAATGCATACGGTAAAGCCGGAAAGGAGGAGGAGGCTCTAAGGTTGTTCAACCATATGAAGGCAACAGGTTGTGTTCCTAATGTTTGCACATACAATGCTGTTCTCGGAATGCTGGGAAAGAAGTCACTGCCCGAGCAGATGATAAAGTTACTTTGTGAAATGAAGTCAACTGGATGTGCCCCAAACCGTATTACATGGAACACAATGCTTGCCATGTGCGGTGATAAGGGTAGGCACAAGTATGTGAACCAGGTATTTCGAGAAATGAAGAATTGTGGTTTTGAGCCTGACAGAGACACATTCAATACCTTGATCAGCGCATATGGACGGTGTGGATCAGAAATAGATGCTGCACAGATGTACGATGACTCCAACGTGATCGATCAAAGCAGGATTTACTCCATGCGTTACAACTTACAATGCACTTCTAAATGCCCTGGCACGGCGAGGGGACTGGAGAGCAGCAGAAGCTGTTATGCTAGACATGAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

577

Amino Acids

64.16

Weight (kDa)

6.01

Isoelectric Point (pI)

38.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	224 - 277	4.8e-13	Pentatricopeptide repeat domain
PPR_2	PF13041	228 - 274	9.7e-13	PPR repeat family
PPR	PF01535	231 - 260	3.6e-06	PPR repeat
PPR_2	PF13041	262 - 311	5.1e-10	PPR repeat family
PPR_3	PF13812	287 - 347	1.7e-08	Pentatricopeptide repeat domain
TPR_24	PF23276	302 - 379	1.3e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	316 - 422	2.1e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	333 - 380	1.2e-12	PPR repeat family
PPR	PF01535	336 - 366	1.7e-06	PPR repeat
PPR_3	PF13812	356 - 417	4.9e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	368 - 416	1.5e-10	PPR repeat family
PPR_3	PF13812	392 - 452	5.4e-16	Pentatricopeptide repeat domain
PPR_1	PF12854	399 - 432	2.5e-09	PPR repeat
PPR_2	PF13041	403 - 448	3.4e-15	PPR repeat family
PPR	PF01535	406 - 436	1.1e-08	PPR repeat
PPR_2	PF13041	438 - 485	6.9e-12	PPR repeat family
PPR_2	PF13041	473 - 520	1.1e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0014583)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18940
fragaria_vesca	FvH4_4g07880
malus_domestica	MD13G1249100.v1.1 MD16G1255600.v1.1
prunus_persica	Prupe.3G037500_v2.0.a1
pyrus_communis	pycom13g21970 pycom16g21670
rosa_chinensis	RchiOBHm_Chr4g0401161
rosa_laevigata	RLG00000009158
rosa_multiflora	Rmu_sc0003257.1_g000006
rosa_roxburghii	Rroxscaffold_5G00346010
rosa_rugosa	Rorug04G0028400
rosa_samantha	Rh4AG105900 Rh4BG100900 Rh4CG114600 Rh4DG098100
rosa_wichuraiana	Rw4G008590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	714
AciI	CCGC	5 cut(s)	104, 125, 176, 257, 1455
AclWI	GGATC	2 cut(s)	697, 1579
AcoI	YGGCCR	1 cut(s)	580
AcsI	RAATTY	7 cut(s)	80, 249, 313, 565, 606, 890, 962
AcuI	CTGAAG	1 cut(s)	282
AfaI	GTAC	7 cut(s)	10, 724, 734, 913, 996, 1223, 1598
AfiI	CCNNNNNNNGG	3 cut(s)	419, 1294, 1678
AflII	CTTAAG	1 cut(s)	553
AjnI	CCWGG	2 cut(s)	1485, 1672
AjuI	GAANNNNNNNTTGG	2 cut(s)	954, 986
AleI	CACNNNNGTG	1 cut(s)	1229
AloI	GAACNNNNNNTCC	2 cut(s)	339, 371
Alw26I	GTCTC	3 cut(s)	239, 1175, 1524
AlwI	GGATC	2 cut(s)	697, 1579
AlwNI	CAGNNNCTG	1 cut(s)	1707
Ama87I	CYCGRG	1 cut(s)	1367
AoxI	GGCC	2 cut(s)	580, 856
ApeKI	GCWGC	8 cut(s)	61, 97, 334, 409, 625, 1133, 1586, 1698
ApoI	RAATTY	7 cut(s)	80, 249, 313, 565, 606, 890, 962
ArsI	GACNNNNNNTTYG	2 cut(s)	419, 451
Asp700I	GAANNNNTTC	1 cut(s)	540
AspLEI	GCGC	3 cut(s)	715, 1021, 1556
AspS9I	GGNCC	1 cut(s)	427
AsuC2I	CCSGG	1 cut(s)	999
AsuHPI	GGTGA	4 cut(s)	209, 774, 928, 1469
AvaI	CYCGRG	1 cut(s)	1367
AvaII	GGWCC	1 cut(s)	427
BaeGI	GKGCMC	1 cut(s)	1417
BaeI	ACNNNNGTAYC	2 cut(s)	17, 50
BalI	TGGCCA	1 cut(s)	582
BbvI	GCAGC	8 cut(s)	73, 84, 321, 421, 637, 1145, 1573, 1710
BccI	CCATC	5 cut(s)	28, 47, 52, 344, 823
BceAI	ACGGC	2 cut(s)	112, 1695
BcgI	CGANNNNNNTGC	2 cut(s)	1148, 1182
BciT130I	CCWGG	2 cut(s)	1487, 1674
BciVI	GTATCC	1 cut(s)	45
BclI	TGATCA	1 cut(s)	1548
BcnI	CCSGG	1 cut(s)	999
BcoDI	GTCTC	3 cut(s)	239, 1175, 1524
BfaI	CTAG	1 cut(s)	1716
BfmI	CTRYAG	1 cut(s)	135
BfrI	CTTAAG	1 cut(s)	553
BfuI	GTATCC	1 cut(s)	45
BisI	GCNGC	9 cut(s)	62, 98, 176, 335, 410, 626, 1134, 1587, 1699
BlsI	GCNGC	9 cut(s)	63, 99, 177, 336, 411, 627, 1135, 1588, 1700
Bme1390I	CCNGG	3 cut(s)	999, 1487, 1674
Bme18I	GGWCC	1 cut(s)	427
BmeT110I	CYCGRG	1 cut(s)	1367
BmgT120I	GGNCC	1 cut(s)	427
BmrFI	CCNGG	3 cut(s)	999, 1487, 1674
BmsI	GCATC	6 cut(s)	84, 286, 647, 1096, 1178, 1573
BpmI	CTGGAG	2 cut(s)	134, 1712
Bpu10I	CCTNAGC	1 cut(s)	161
BpuEI	CTTGAG	1 cut(s)	1084
BpuMI	CCSGG	1 cut(s)	999
Bsa29I	ATCGAT	1 cut(s)	1617
BsaAI	YACGTR	1 cut(s)	1221
BsaJI	CCNNGG	2 cut(s)	1158, 1672
BsaXI	ACNNNNNCTCC	4 cut(s)	339, 369, 1589, 1619
Bsc4I	CCNNNNNNNGG	3 cut(s)	419, 1294, 1678
Bse1I	ACTGG	3 cut(s)	730, 1411, 1695
BseBI	CCWGG	2 cut(s)	1487, 1674
BseCI	ATCGAT	1 cut(s)	1617
BseDI	CCNNGG	2 cut(s)	1158, 1672
BseGI	GGATG	4 cut(s)	39, 688, 871, 1415
BseLI	CCNNNNNNNGG	3 cut(s)	419, 1294, 1678
BseMII	CTCAG	2 cut(s)	125, 152
BseNI	ACTGG	3 cut(s)	730, 1411, 1695
BseRI	GAGGAG	5 cut(s)	99, 137, 160, 1277, 1280
BseSI	GKGCMC	1 cut(s)	1417
BseXI	GCAGC	8 cut(s)	73, 84, 321, 421, 637, 1145, 1573, 1710
BseYI	CCCAGC	1 cut(s)	1348
BsgI	GTGCAG	1 cut(s)	1572
Bsh1285I	CGRYCG	1 cut(s)	328
BshFI	GGCC	2 cut(s)	582, 858
BshVI	ATCGAT	1 cut(s)	1617
BsiEI	CGRYCG	1 cut(s)	328
BsiHKCI	CYCGRG	1 cut(s)	1367
BsiSI	CCGG	2 cut(s)	999, 1254
BslFI	GGGAC	2 cut(s)	293, 1701
BslI	CCNNNNNNNGG	3 cut(s)	419, 1294, 1678
BsmAI	GTCTC	3 cut(s)	239, 1175, 1524
BsmBI	CGTCTC	1 cut(s)	1175
BsmFI	GGGAC	2 cut(s)	293, 1701
BsmI	GAATGC	1 cut(s)	1350
BsnI	GGCC	2 cut(s)	582, 858
BsoBI	CYCGRG	1 cut(s)	1367
Bsp1286I	GDGCHC	1 cut(s)	1417
Bsp143I	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
BspACI	CCGC	5 cut(s)	104, 125, 176, 257, 1455
BspANI	GGCC	2 cut(s)	582, 858
BspCNI	CTCAG	2 cut(s)	124, 153
BspDI	ATCGAT	1 cut(s)	1617
BspPI	GGATC	2 cut(s)	697, 1579
BspTI	CTTAAG	1 cut(s)	553
BsrI	ACTGG	3 cut(s)	730, 1411, 1695
BssECI	CCNNGG	2 cut(s)	1158, 1672
BssMI	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
Bst2UI	CCWGG	2 cut(s)	1487, 1674
Bst4CI	ACNGT	6 cut(s)	916, 1006, 1231, 1247, 1424, 1566
Bst6I	CTCTTC	2 cut(s)	249, 928
BstAFI	CTTAAG	1 cut(s)	553
BstAPI	GCANNNNNTGC	1 cut(s)	415
BstBAI	YACGTR	1 cut(s)	1221
BstC8I	GCNNGC	2 cut(s)	120, 1446
BstDEI	CTNAG	3 cut(s)	111, 161, 1274
BstF5I	GGATG	4 cut(s)	39, 688, 871, 1415
BstHHI	GCGC	3 cut(s)	715, 1021, 1556
BstKTI	GATC	7 cut(s)	328, 705, 839, 1551, 1574, 1617, 1621
BstMAI	GTCTC	3 cut(s)	239, 1175, 1524
BstMBI	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
BstMCI	CGRYCG	1 cut(s)	328
BstMWI	GCNNNNNNNGC	4 cut(s)	103, 124, 415, 1704
BstNI	CCWGG	2 cut(s)	1487, 1674
BstSCI	CCNGG	3 cut(s)	997, 1485, 1672
BstSFI	CTRYAG	1 cut(s)	135
BstSLI	GKGCMC	1 cut(s)	1417
BstSNI	TACGTA	1 cut(s)	1221
BstV1I	GCAGC	8 cut(s)	73, 84, 321, 421, 637, 1145, 1573, 1710
BstXI	CCANNNNNNTGG	2 cut(s)	227, 437
Bsu15I	ATCGAT	1 cut(s)	1617
BsuI	GTATCC	1 cut(s)	45
BsuRI	GGCC	2 cut(s)	582, 858
BsuTUI	ATCGAT	1 cut(s)	1617
BtsCI	GGATG	4 cut(s)	39, 688, 871, 1415
BtsI	GCAGTG	1 cut(s)	1361
BtsIMutI	CAGTG	1 cut(s)	1361
Cac8I	GCNNGC	2 cut(s)	120, 1446
CaiI	CAGNNNCTG	1 cut(s)	1707
CfoI	GCGC	3 cut(s)	715, 1021, 1556
Cfr13I	GGNCC	1 cut(s)	427
ClaI	ATCGAT	1 cut(s)	1617
CsiI	ACCWGGT	1 cut(s)	1485
Csp6I	GTAC	7 cut(s)	9, 723, 733, 912, 995, 1222, 1597
CviAII	CATG	7 cut(s)	419, 710, 808, 1431, 1450, 1639, 1721
CviQI	GTAC	7 cut(s)	9, 723, 733, 912, 995, 1222, 1597
DdeI	CTNAG	3 cut(s)	111, 161, 1274
DpnI	GATC	7 cut(s)	327, 704, 838, 1550, 1573, 1616, 1620
DpnII	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
DraI	TTTAAA	1 cut(s)	570
EaeI	YGGCCR	1 cut(s)	580
Eam1104I	CTCTTC	2 cut(s)	249, 928
EarI	CTCTTC	2 cut(s)	249, 928
EciI	GGCGGA	2 cut(s)	114, 272
Eco105I	TACGTA	1 cut(s)	1221
Eco147I	AGGCCT	1 cut(s)	858
Eco32I	GATATC	1 cut(s)	921
Eco47I	GGWCC	1 cut(s)	427
Eco57I	CTGAAG	1 cut(s)	282
Eco88I	CYCGRG	1 cut(s)	1367
EcoRI	GAATTC	2 cut(s)	606, 962
EcoRII	CCWGG	2 cut(s)	1485, 1672
EcoRV	GATATC	1 cut(s)	921
EcoT22I	ATGCAT	1 cut(s)	1243
Esp3I	CGTCTC	1 cut(s)	1175
FaeI	CATG	7 cut(s)	422, 713, 811, 1434, 1453, 1642, 1724
FaqI	GGGAC	2 cut(s)	293, 1701
FatI	CATG	7 cut(s)	418, 709, 807, 1430, 1449, 1638, 1720
FauNDI	CATATG	2 cut(s)	1290, 1558
FbaI	TGATCA	1 cut(s)	1548
Fnu4HI	GCNGC	9 cut(s)	62, 98, 176, 335, 410, 626, 1134, 1587, 1699
FokI	GGATG	4 cut(s)	26, 695, 878, 1422
Fsp4HI	GCNGC	9 cut(s)	62, 98, 176, 335, 410, 626, 1134, 1587, 1699
FspAI	RTGCGCAY	1 cut(s)	714
FspBI	CTAG	1 cut(s)	1716
FspI	TGCGCA	1 cut(s)	714
GlaI	GCGC	3 cut(s)	714, 1020, 1555
GluI	GCNGC	9 cut(s)	62, 98, 176, 335, 410, 626, 1134, 1587, 1699
GsaI	CCCAGC	1 cut(s)	1352
GsuI	CTGGAG	2 cut(s)	134, 1712
HaeIII	GGCC	2 cut(s)	582, 858
HapII	CCGG	2 cut(s)	999, 1254
HhaI	GCGC	3 cut(s)	715, 1021, 1556
Hin1II	CATG	7 cut(s)	422, 713, 811, 1434, 1453, 1642, 1724
Hin6I	GCGC	3 cut(s)	713, 1019, 1554
HinP1I	GCGC	3 cut(s)	713, 1019, 1554
HincII	GTYRAC	1 cut(s)	1404
HindII	GTYRAC	1 cut(s)	1404
HinfI	GANTC	7 cut(s)	140, 260, 541, 620, 777, 1152, 1604
HpaII	CCGG	2 cut(s)	999, 1254
HphI	GGTGA	4 cut(s)	209, 774, 928, 1469
Hpy166II	GTNNAC	4 cut(s)	903, 1224, 1404, 1483
Hpy188I	TCNGA	5 cut(s)	562, 689, 1159, 1343, 1576
Hpy188III	TCNNGA	6 cut(s)	24, 160, 329, 345, 359, 1496
Hpy8I	GTNNAC	4 cut(s)	903, 1224, 1404, 1483
Hpy99I	CGWCG	1 cut(s)	703
HpyAV	CCTTC	3 cut(s)	716, 1157, 1288
HpyCH4III	ACNGT	6 cut(s)	916, 1006, 1231, 1247, 1424, 1566
HpyCH4IV	ACGT	2 cut(s)	1220, 1611
HpyCH4V	TGCA	8 cut(s)	418, 638, 743, 1169, 1241, 1323, 1589, 1659
HpyF10VI	GCNNNNNNNGC	4 cut(s)	103, 124, 415, 1704
HpyF3I	CTNAG	3 cut(s)	111, 161, 1274
HpySE526I	ACGT	2 cut(s)	1220, 1611
Hsp92II	CATG	7 cut(s)	422, 713, 811, 1434, 1453, 1642, 1724
HspAI	GCGC	3 cut(s)	713, 1019, 1554
Ksp22I	TGATCA	1 cut(s)	1548
Kzo9I	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
LmnI	GCTCC	1 cut(s)	127
Lsp1109I	GCAGC	8 cut(s)	73, 84, 321, 421, 637, 1145, 1573, 1710
LweI	GCATC	6 cut(s)	84, 286, 647, 1096, 1178, 1573
MabI	ACCWGGT	1 cut(s)	1485
MaeI	CTAG	1 cut(s)	1716
MaeII	ACGT	2 cut(s)	1220, 1611
MalI	GATC	7 cut(s)	327, 704, 838, 1550, 1573, 1616, 1620
MboI	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
MboII	GAAGA	6 cut(s)	236, 298, 680, 838, 945, 1516
MfeI	CAATTG	2 cut(s)	508, 744
MhlI	GDGCHC	1 cut(s)	1417
MlsI	TGGCCA	1 cut(s)	582
MluNI	TGGCCA	1 cut(s)	582
MlyI	GAGTC	3 cut(s)	134, 629, 1598
MmeI	TCCRAC	2 cut(s)	573, 1632
Mox20I	TGGCCA	1 cut(s)	582
Mph1103I	ATGCAT	1 cut(s)	1243
MroXI	GAANNNNTTC	1 cut(s)	540
MscI	TGGCCA	1 cut(s)	582
MseI	TTAA	6 cut(s)	206, 554, 569, 575, 977, 1073
MslI	CAYNNNNRTG	2 cut(s)	1229, 1476
Msp20I	TGGCCA	1 cut(s)	582
MspCI	CTTAAG	1 cut(s)	553
MspI	CCGG	2 cut(s)	999, 1254
MspR9I	CCNGG	3 cut(s)	999, 1487, 1674
MunI	CAATTG	2 cut(s)	508, 744
Mva1269I	GAATGC	1 cut(s)	1350
MvaI	CCWGG	2 cut(s)	1487, 1674
MwoI	GCNNNNNNNGC	4 cut(s)	103, 124, 415, 1704
NciI	CCSGG	1 cut(s)	999
NdeI	CATATG	2 cut(s)	1290, 1558
NdeII	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
NlaIII	CATG	7 cut(s)	422, 713, 811, 1434, 1453, 1642, 1724
NmuCI	GTSAC	3 cut(s)	793, 981, 1359
NsbI	TGCGCA	1 cut(s)	714
NsiI	ATGCAT	1 cut(s)	1243
OliI	CACNNNNGTG	1 cut(s)	1229
PceI	AGGCCT	1 cut(s)	858
PcsI	WCGNNNNNNNCGW	3 cut(s)	260, 629, 638
PctI	GAATGC	1 cut(s)	1350
PdmI	GAANNNNTTC	1 cut(s)	540
PfeI	GAWTC	4 cut(s)	260, 541, 777, 1152
PkrI	GCNGC	9 cut(s)	63, 99, 177, 336, 411, 627, 1135, 1588, 1700
Ple19I	CGATCG	1 cut(s)	328
PleI	GAGTC	3 cut(s)	134, 628, 1598
PpsI	GAGTC	3 cut(s)	134, 628, 1598
Ppu21I	YACGTR	1 cut(s)	1221
Psp6I	CCWGG	2 cut(s)	1485, 1672
PspFI	CCCAGC	1 cut(s)	1348
PspGI	CCWGG	2 cut(s)	1485, 1672
PspPI	GGNCC	1 cut(s)	427
PstNI	CAGNNNCTG	1 cut(s)	1707
PvuI	CGATCG	1 cut(s)	328
RsaI	GTAC	7 cut(s)	10, 724, 734, 913, 996, 1223, 1598
RsaNI	GTAC	7 cut(s)	9, 723, 733, 912, 995, 1222, 1597
RseI	CAYNNNNRTG	2 cut(s)	1229, 1476
SaqAI	TTAA	6 cut(s)	206, 554, 569, 575, 977, 1073
SatI	GCNGC	9 cut(s)	62, 98, 176, 335, 410, 626, 1134, 1587, 1699
Sau3AI	GATC	7 cut(s)	325, 702, 836, 1548, 1571, 1614, 1618
Sau96I	GGNCC	1 cut(s)	427
SchI	GAGTC	3 cut(s)	134, 629, 1598
ScrFI	CCNGG	3 cut(s)	999, 1487, 1674
SduI	GDGCHC	1 cut(s)	1417
SexAI	ACCWGGT	1 cut(s)	1485
SfaNI	GCATC	6 cut(s)	84, 286, 647, 1096, 1178, 1573
SfcI	CTRYAG	1 cut(s)	135
SinI	GGWCC	1 cut(s)	427
SmiMI	CAYNNNNRTG	2 cut(s)	1229, 1476
SmlI	CTYRAG	2 cut(s)	553, 1063
SmoI	CTYRAG	2 cut(s)	553, 1063
SnaBI	TACGTA	1 cut(s)	1221
SseBI	AGGCCT	1 cut(s)	858
SsiI	CCGC	5 cut(s)	104, 125, 176, 257, 1455
SspMI	CTAG	1 cut(s)	1716
StuI	AGGCCT	1 cut(s)	858
StyD4I	CCNGG	3 cut(s)	997, 1485, 1672
TaaI	ACNGT	6 cut(s)	916, 1006, 1231, 1247, 1424, 1566
TaiI	ACGT	2 cut(s)	1223, 1614
TaqI	TCGA	9 cut(s)	25, 263, 318, 328, 360, 641, 835, 1495, 1617
TauI	GCSGC	1 cut(s)	178
TfiI	GAWTC	4 cut(s)	260, 541, 777, 1152
Tru1I	TTAA	6 cut(s)	206, 554, 569, 575, 977, 1073
Tru9I	TTAA	6 cut(s)	206, 554, 569, 575, 977, 1073
TscAI	CASTG	1 cut(s)	1368
TseFI	GTSAC	3 cut(s)	793, 981, 1359
TseI	GCWGC	8 cut(s)	61, 97, 334, 409, 625, 1133, 1586, 1698
Tsp45I	GTSAC	3 cut(s)	793, 981, 1359
TspDTI	ATGAA	7 cut(s)	299, 698, 966, 975, 1307, 1412, 1517
TspRI	CASTG	1 cut(s)	1368
Vha464I	CTTAAG	1 cut(s)	553
VpaK11BI	GGWCC	1 cut(s)	427
XapI	RAATTY	7 cut(s)	80, 249, 313, 565, 606, 890, 962
XmnI	GAANNNNTTC	1 cut(s)	540
XspI	CTAG	1 cut(s)	1716
Zsp2I	ATGCAT	1 cut(s)	1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.