pycom16g24460

Abscisic acid receptor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
25927126 .. 25927746
621 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 621 bp
ATGGAGAAAGGGGAGGGCTCAATGGCCGAGCAAGACGAGGCGGAGGAAACCCAGCACCACCTCACCCTCCCGTCCGGGTTGACTCAGGACGAGTTCGACGAGTTGAAGCAGTTCGTCAACGAATTCCACAGGTACCAGGTGGGCCCCGGAAAATGTTCTTCCCTAATTGCGCAACGCGTGCACGCGCCACCCGACACCGTGTGGTCTCTGGTGCGGCGCTTCGACCAGCCCCAGACCTACAAGCACTTCATCCGGAGCTGTAACGTGAAGGAAGGCTTTAAAATGACCGTCGGGTGCACCAGGGACGTCAATGTTATCTCCGGCCTACCGGCTGCCACCAGCACCGAGCGCCTCGACTTACTCGACGAAGACCGCCACGTCACCGGTTTCAGTATCATTGGGGGCGAGCACCGCCTCAGGAATTACCGATCCGTGACGACCGTGCATGGGTTTGACCGTGACGGAAGGATCTGGACCGTTGTTTTGGAATCCTACGTCGTCGATGTGCCCGAGGGGAATTCCGAGGAGGACACGCGTCTCTTCGCGGATACTGTTGTCAAGTTGAATCTCCAGAAGCTGGCGTCGGTCACCGAAGGCCTGGCGGGCAACGGTGGATGCTAA

Protein Analysis

207

Amino Acids

23.05

Weight (kDa)

5.25

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Polyketide_cyc2 PF10604 59 - 196 1.3e-12 Polyketide cyclase / dehydrase and lipid transport
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011952)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 377
AatII GACGTC 1 cut(s) 309
Acc16I TGCGCA 1 cut(s) 171
Acc65I GGTACC 1 cut(s) 132
AccB1I GGYRCC 1 cut(s) 132
AccB7I CCANNNNNTGG 1 cut(s) 577
AccII CGCG 4 cut(s) 177, 185, 535, 545
AccIII TCCGGA 1 cut(s) 252
AciI CCGC 6 cut(s) 41, 214, 373, 412, 545, 602
AclWI GGATC 2 cut(s) 423, 476
AcoI YGGCCR 1 cut(s) 24
AcsI RAATTY 2 cut(s) 122, 517
AcyI GRCGYC 2 cut(s) 306, 581
AdeI CACNNNGTG 1 cut(s) 201
AfaI GTAC 1 cut(s) 134
AfiI CCNNNNNNNGG 2 cut(s) 447, 577
AflIII ACRYGT 2 cut(s) 175, 533
AgeI ACCGGT 1 cut(s) 383
AgsI TTSAA 2 cut(s) 106, 565
AjiI CACGTC 1 cut(s) 379
AjnI CCWGG 3 cut(s) 135, 299, 597
AluBI AGCT 2 cut(s) 258, 577
AluI AGCT 2 cut(s) 258, 577
Alw21I GWGCWC 3 cut(s) 183, 299, 411
Alw26I GTCTC 2 cut(s) 210, 542
Alw44I GTGCAC 2 cut(s) 179, 295
AlwI GGATC 2 cut(s) 423, 476
AlwNI CAGNNNCTG 1 cut(s) 577
Ama87I CYCGRG 1 cut(s) 509
Aor13HI TCCGGA 1 cut(s) 252
AoxI GGCC 4 cut(s) 24, 142, 322, 595
ApaI GGGCCC 1 cut(s) 146
ApaLI GTGCAC 2 cut(s) 179, 295
ApeKI GCWGC 1 cut(s) 332
ApoI RAATTY 2 cut(s) 122, 517
ArsI GACNNNNNNTTYG 2 cut(s) 466, 498
AsiGI ACCGGT 1 cut(s) 383
Asp700I GAANNNNTTC 2 cut(s) 110, 154
Asp718I GGTACC 1 cut(s) 132
AspLEI GCGC 4 cut(s) 172, 187, 219, 351
AspS9I GGNCC 3 cut(s) 142, 143, 474
AsuC2I CCSGG 2 cut(s) 76, 147
AsuHPI GGTGA 3 cut(s) 55, 373, 580
AvaI CYCGRG 1 cut(s) 509
AvaII GGWCC 1 cut(s) 474
AxyI CCTNAGG 1 cut(s) 416
BaeGI GKGCMC 4 cut(s) 146, 183, 299, 510
BaeI ACNNNNGTAYC 2 cut(s) 540, 573
BanI GGYRCC 1 cut(s) 132
BanII GRGCYC 2 cut(s) 20, 146
BbsI GAAGAC 1 cut(s) 375
Bbv12I GWGCWC 3 cut(s) 183, 299, 411
BbvI GCAGC 1 cut(s) 319
BciT130I CCWGG 3 cut(s) 137, 301, 599
BciVI GTATCC 1 cut(s) 541
BcnI CCSGG 2 cut(s) 76, 147
BcoDI GTCTC 2 cut(s) 210, 542
BfoI RGCGCY 2 cut(s) 220, 352
BfuI GTATCC 1 cut(s) 541
BglI GCCNNNNNGGC 1 cut(s) 603
BisI GCNGC 2 cut(s) 215, 333
BlsI GCNGC 2 cut(s) 216, 334
Bme1390I CCNGG 5 cut(s) 76, 137, 147, 301, 599
Bme18I GGWCC 1 cut(s) 474
BmeT110I CYCGRG 1 cut(s) 509
BmgBI CACGTC 1 cut(s) 379
BmgT120I GGNCC 3 cut(s) 142, 143, 474
BmiI GGNNCC 3 cut(s) 134, 144, 145
BmrFI CCNGG 5 cut(s) 76, 137, 147, 301, 599
BmsI GCATC 1 cut(s) 605
BoxI GACNNNNGTC 1 cut(s) 534
BpiI GAAGAC 1 cut(s) 375
BpmI CTGGAG 1 cut(s) 554
BpuMI CCSGG 2 cut(s) 76, 147
BsaHI GRCGYC 2 cut(s) 306, 581
BsaI GGTCTC 1 cut(s) 210
BsaJI CCNNGG 4 cut(s) 145, 300, 510, 522
BsaWI WCCGGW 2 cut(s) 252, 383
Bsc4I CCNNNNNNNGG 2 cut(s) 447, 577
Bse118I RCCGGY 2 cut(s) 328, 383
Bse21I CCTNAGG 1 cut(s) 416
BseAI TCCGGA 1 cut(s) 252
BseBI CCWGG 3 cut(s) 137, 301, 599
BseDI CCNNGG 4 cut(s) 145, 300, 510, 522
BseGI GGATG 2 cut(s) 249, 620
BseLI CCNNNNNNNGG 2 cut(s) 447, 577
BseMII CTCAG 2 cut(s) 98, 430
BseRI GAGGAG 1 cut(s) 539
BseSI GKGCMC 4 cut(s) 146, 183, 299, 510
BseXI GCAGC 1 cut(s) 319
BseYI CCCAGC 1 cut(s) 51
Bsh1236I CGCG 4 cut(s) 177, 185, 535, 545
Bsh1285I CGRYCG 1 cut(s) 441
BshFI GGCC 4 cut(s) 26, 144, 324, 597
BshNI GGYRCC 1 cut(s) 132
BshTI ACCGGT 1 cut(s) 383
BsiEI CGRYCG 1 cut(s) 441
BsiHKAI GWGCWC 3 cut(s) 183, 299, 411
BsiHKCI CYCGRG 1 cut(s) 509
BsiSI CCGG 6 cut(s) 75, 147, 253, 321, 329, 384
BslFI GGGAC 1 cut(s) 317
BslI CCNNNNNNNGG 2 cut(s) 447, 577
BsmAI GTCTC 2 cut(s) 210, 542
BsmBI CGTCTC 1 cut(s) 542
BsmFI GGGAC 1 cut(s) 317
BsnI GGCC 4 cut(s) 26, 144, 324, 597
Bso31I GGTCTC 1 cut(s) 210
BsoBI CYCGRG 1 cut(s) 509
Bsp120I GGGCCC 1 cut(s) 142
Bsp1286I GDGCHC 6 cut(s) 20, 146, 183, 299, 411, 510
Bsp13I TCCGGA 1 cut(s) 252
Bsp143I GATC 2 cut(s) 428, 468
BspACI CCGC 6 cut(s) 41, 214, 373, 412, 545, 602
BspANI GGCC 4 cut(s) 26, 144, 324, 597
BspCNI CTCAG 2 cut(s) 97, 429
BspEI TCCGGA 1 cut(s) 252
BspFNI CGCG 4 cut(s) 177, 185, 535, 545
BspLI GGNNCC 3 cut(s) 134, 144, 145
BspPI GGATC 2 cut(s) 423, 476
BspT107I GGYRCC 1 cut(s) 132
BspTNI GGTCTC 1 cut(s) 210
BsrFI RCCGGY 2 cut(s) 328, 383
BssAI RCCGGY 2 cut(s) 328, 383
BssECI CCNNGG 4 cut(s) 145, 300, 510, 522
BssMI GATC 2 cut(s) 428, 468
BssNI GRCGYC 2 cut(s) 306, 581
Bst2UI CCWGG 3 cut(s) 137, 301, 599
Bst4CI ACNGT 7 cut(s) 199, 289, 442, 458, 478, 553, 611
Bst6I CTCTTC 1 cut(s) 545
BstACI GRCGYC 2 cut(s) 306, 581
BstAPI GCANNNNNTGC 1 cut(s) 178
BstC8I GCNNGC 5 cut(s) 179, 183, 407, 579, 604
BstDEI CTNAG 2 cut(s) 84, 416
BstEII GGTNACC 1 cut(s) 586
BstF5I GGATG 2 cut(s) 249, 620
BstFNI CGCG 4 cut(s) 177, 185, 535, 545
BstH2I RGCGCY 2 cut(s) 220, 352
BstHHI GCGC 4 cut(s) 172, 187, 219, 351
BstKTI GATC 2 cut(s) 431, 471
BstMAI GTCTC 2 cut(s) 210, 542
BstMBI GATC 2 cut(s) 428, 468
BstMCI CGRYCG 1 cut(s) 441
BstMWI GCNNNNNNNGC 4 cut(s) 178, 348, 411, 603
BstNI CCWGG 3 cut(s) 137, 301, 599
BstPAI GACNNNNGTC 1 cut(s) 534
BstPI GGTNACC 1 cut(s) 586
BstSCI CCNGG 5 cut(s) 74, 135, 145, 299, 597
BstSLI GKGCMC 4 cut(s) 146, 183, 299, 510
BstUI CGCG 4 cut(s) 177, 185, 535, 545
BstV1I GCAGC 1 cut(s) 319
BstV2I GAAGAC 1 cut(s) 375
BstX2I RGATCY 1 cut(s) 468
BstYI RGATCY 1 cut(s) 468
Bsu36I CCTNAGG 1 cut(s) 416
BsuI GTATCC 1 cut(s) 541
BsuRI GGCC 4 cut(s) 26, 144, 324, 597
BtrI CACGTC 1 cut(s) 379
BtsCI GGATG 2 cut(s) 249, 620
Cac8I GCNNGC 5 cut(s) 179, 183, 407, 579, 604
CaiI CAGNNNCTG 1 cut(s) 577
CfoI GCGC 4 cut(s) 172, 187, 219, 351
Cfr10I RCCGGY 2 cut(s) 328, 383
Cfr13I GGNCC 3 cut(s) 142, 143, 474
CseI GACGC 2 cut(s) 524, 570
CsiI ACCWGGT 1 cut(s) 135
Csp6I GTAC 1 cut(s) 133
CspAI ACCGGT 1 cut(s) 383
CviAII CATG 1 cut(s) 446
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 2 cut(s) 84, 416
DpnI GATC 2 cut(s) 430, 470
DpnII GATC 2 cut(s) 428, 468
DraI TTTAAA 1 cut(s) 280
DraIII CACNNNGTG 1 cut(s) 201
DrdI GACNNNNNNGTC 1 cut(s) 377
DseDI GACNNNNNNGTC 1 cut(s) 377
EaeI YGGCCR 1 cut(s) 24
Eam1104I CTCTTC 1 cut(s) 545
EarI CTCTTC 1 cut(s) 545
EciI GGCGGA 1 cut(s) 56
Eco147I AGGCCT 1 cut(s) 597
Eco24I GRGCYC 2 cut(s) 20, 146
Eco31I GGTCTC 1 cut(s) 210
Eco47I GGWCC 1 cut(s) 474
Eco81I CCTNAGG 1 cut(s) 416
Eco88I CYCGRG 1 cut(s) 509
Eco91I GGTNACC 1 cut(s) 586
EcoO109I RGGNCCY 1 cut(s) 143
EcoO65I GGTNACC 1 cut(s) 586
EcoRI GAATTC 2 cut(s) 122, 517
EcoRII CCWGG 3 cut(s) 135, 299, 597
EcoT38I GRGCYC 2 cut(s) 20, 146
Esp3I CGTCTC 1 cut(s) 542
FaeI CATG 1 cut(s) 449
FaiI YATR 1 cut(s) 447
FalI AAGNNNNNCTT 2 cut(s) 260, 292
FaqI GGGAC 1 cut(s) 317
FatI CATG 1 cut(s) 445
FauI CCCGC 1 cut(s) 595
Fnu4HI GCNGC 2 cut(s) 215, 333
FokI GGATG 1 cut(s) 236
FriOI GRGCYC 2 cut(s) 20, 146
Fsp4HI GCNGC 2 cut(s) 215, 333
FspI TGCGCA 1 cut(s) 171
GlaI GCGC 4 cut(s) 171, 186, 218, 350
GluI GCNGC 2 cut(s) 215, 333
GsaI CCCAGC 1 cut(s) 55
GsuI CTGGAG 1 cut(s) 554
HaeII RGCGCY 2 cut(s) 220, 352
HaeIII GGCC 4 cut(s) 26, 144, 324, 597
HapII CCGG 6 cut(s) 75, 147, 253, 321, 329, 384
HgaI GACGC 2 cut(s) 524, 570
HhaI GCGC 4 cut(s) 172, 187, 219, 351
Hin1I GRCGYC 2 cut(s) 306, 581
Hin1II CATG 1 cut(s) 449
Hin6I GCGC 4 cut(s) 170, 185, 217, 349
HinP1I GCGC 4 cut(s) 170, 185, 217, 349
HincII GTYRAC 2 cut(s) 81, 118
HindII GTYRAC 2 cut(s) 81, 118
HinfI GANTC 3 cut(s) 82, 488, 565
HpaII CCGG 6 cut(s) 75, 147, 253, 321, 329, 384
HphI GGTGA 3 cut(s) 55, 373, 580
Hpy166II GTNNAC 4 cut(s) 81, 118, 181, 297
Hpy188I TCNGA 1 cut(s) 523
Hpy188III TCNNGA 5 cut(s) 86, 253, 418, 472, 571
Hpy8I GTNNAC 4 cut(s) 81, 118, 181, 297
Hpy99I CGWCG 6 cut(s) 101, 293, 368, 500, 503, 586
HpyAV CCTTC 4 cut(s) 262, 266, 459, 587
HpyCH4III ACNGT 7 cut(s) 199, 289, 442, 458, 478, 553, 611
HpyCH4IV ACGT 4 cut(s) 264, 306, 378, 495
HpyCH4V TGCA 3 cut(s) 181, 297, 445
HpyF10VI GCNNNNNNNGC 4 cut(s) 178, 348, 411, 603
HpyF3I CTNAG 2 cut(s) 84, 416
HpySE526I ACGT 4 cut(s) 264, 306, 378, 495
Hsp92I GRCGYC 2 cut(s) 306, 581
Hsp92II CATG 1 cut(s) 449
HspAI GCGC 4 cut(s) 170, 185, 217, 349
Kpn2I TCCGGA 1 cut(s) 252
KpnI GGTACC 1 cut(s) 136
Kzo9I GATC 2 cut(s) 428, 468
LmnI GCTCC 1 cut(s) 255
Lsp1109I GCAGC 1 cut(s) 319
LweI GCATC 1 cut(s) 605
MabI ACCWGGT 1 cut(s) 135
MaeII ACGT 4 cut(s) 264, 306, 378, 495
MaeIII GTNAC 5 cut(s) 260, 379, 433, 458, 586
MalI GATC 2 cut(s) 430, 470
MboI GATC 2 cut(s) 428, 468
MboII GAAGA 3 cut(s) 150, 380, 532
MflI RGATCY 1 cut(s) 468
MhlI GDGCHC 6 cut(s) 20, 146, 183, 299, 411, 510
MluCI AATT 4 cut(s) 122, 165, 421, 517
MluI ACGCGT 2 cut(s) 175, 533
MlyI GAGTC 1 cut(s) 76
MroI TCCGGA 1 cut(s) 252
MroXI GAANNNNTTC 2 cut(s) 110, 154
MseI TTAA 1 cut(s) 279
MspI CCGG 6 cut(s) 75, 147, 253, 321, 329, 384
MspR9I CCNGG 5 cut(s) 76, 137, 147, 301, 599
MvaI CCWGG 3 cut(s) 137, 301, 599
MvnI CGCG 4 cut(s) 177, 185, 535, 545
MwoI GCNNNNNNNGC 4 cut(s) 178, 348, 411, 603
NciI CCSGG 2 cut(s) 76, 147
NdeII GATC 2 cut(s) 428, 468
NlaIII CATG 1 cut(s) 449
NlaIV GGNNCC 3 cut(s) 134, 144, 145
NmeAIII GCCGAG 1 cut(s) 52
NmuCI GTSAC 4 cut(s) 379, 433, 458, 586
NsbI TGCGCA 1 cut(s) 171
PceI AGGCCT 1 cut(s) 597
PcsI WCGNNNNNNNCGW 4 cut(s) 96, 189, 360, 507
PdmI GAANNNNTTC 2 cut(s) 110, 154
PfeI GAWTC 2 cut(s) 488, 565
PflMI CCANNNNNTGG 1 cut(s) 577
PinAI ACCGGT 1 cut(s) 383
PkrI GCNGC 2 cut(s) 216, 334
PleI GAGTC 1 cut(s) 76
PpsI GAGTC 1 cut(s) 76
PshAI GACNNNNGTC 1 cut(s) 534
Psp6I CCWGG 3 cut(s) 135, 299, 597
PspEI GGTNACC 1 cut(s) 586
PspFI CCCAGC 1 cut(s) 51
PspGI CCWGG 3 cut(s) 135, 299, 597
PspN4I GGNNCC 3 cut(s) 134, 144, 145
PspOMI GGGCCC 1 cut(s) 142
PspPI GGNCC 3 cut(s) 142, 143, 474
PstNI CAGNNNCTG 1 cut(s) 577
PsuI RGATCY 1 cut(s) 468
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
SaqAI TTAA 1 cut(s) 279
SatI GCNGC 2 cut(s) 215, 333
Sau3AI GATC 2 cut(s) 428, 468
Sau96I GGNCC 3 cut(s) 142, 143, 474
SchI GAGTC 1 cut(s) 76
ScrFI CCNGG 5 cut(s) 76, 137, 147, 301, 599
SduI GDGCHC 6 cut(s) 20, 146, 183, 299, 411, 510
SexAI ACCWGGT 1 cut(s) 135
SfaNI GCATC 1 cut(s) 605
SinI GGWCC 1 cut(s) 474
Sse9I AATT 4 cut(s) 122, 165, 421, 517
SseBI AGGCCT 1 cut(s) 597
SsiI CCGC 6 cut(s) 41, 214, 373, 412, 545, 602
StuI AGGCCT 1 cut(s) 597
StyD4I CCNGG 5 cut(s) 74, 135, 145, 299, 597
TaaI ACNGT 7 cut(s) 199, 289, 442, 458, 478, 553, 611
TaiI ACGT 4 cut(s) 267, 309, 381, 498
TaqI TCGA 5 cut(s) 96, 222, 354, 363, 501
TaqII GACCGA 1 cut(s) 574
TasI AATT 4 cut(s) 122, 165, 421, 517
TauI GCSGC 1 cut(s) 217
TfiI GAWTC 2 cut(s) 488, 565
Tru1I TTAA 1 cut(s) 279
Tru9I TTAA 1 cut(s) 279
TseFI GTSAC 4 cut(s) 379, 433, 458, 586
TseI GCWGC 1 cut(s) 332
Tsp45I GTSAC 4 cut(s) 379, 433, 458, 586
TspDTI ATGAA 1 cut(s) 238
TspGWI ACGGA 2 cut(s) 421, 477
Van91I CCANNNNNTGG 1 cut(s) 577
VneI GTGCAC 2 cut(s) 179, 295
VpaK11BI GGWCC 1 cut(s) 474
XapI RAATTY 2 cut(s) 122, 517
XmnI GAANNNNTTC 2 cut(s) 110, 154
ZraI GACGTC 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.