26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19006 AT4G19006 AT5G45620 AT5G45620 |
| fragaria_vesca | FvH4_5g23350 FvH4_5g23350 FvH4_5g23350 |
| malus_domestica | MD06G1024700.v1.1 MD16G1281300.v1.1 |
| prunus_persica | Prupe.5G025900_v2.0.a1 |
| pyrus_communis | pycom06g02000 pycom16g25120 |
| rosa_chinensis | RchiOBHm_Chr7g0212291 |
| rosa_laevigata | RLG00000002897 |
| rosa_multiflora | Rmu_sc0001911.1_g000049 |
| rosa_roxburghii | Rroxscaffold_3G00246920 |
| rosa_rugosa | Rorug07G0133400 |
| rosa_samantha | Rh7AG266000 Rh7BG260100 Rh7CG282900 Rh7DG272900 |
| rosa_wichuraiana | Rw7G022770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 32, 669 |
| AccB1I | GGYRCC | 1 cut(s) | 99 |
| AccII | CGCG | 2 cut(s) | 8, 38 |
| AccIII | TCCGGA | 1 cut(s) | 43 |
| AciI | CCGC | 2 cut(s) | 6, 1133 |
| AclWI | GGATC | 3 cut(s) | 452, 606, 1057 |
| AcoI | YGGCCR | 2 cut(s) | 3, 878 |
| AcsI | RAATTY | 1 cut(s) | 518 |
| AcuI | CTGAAG | 2 cut(s) | 856, 906 |
| AfaI | GTAC | 5 cut(s) | 17, 62, 83, 257, 777 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 265, 292 |
| AgsI | TTSAA | 6 cut(s) | 311, 376, 592, 728, 736, 815 |
| AjnI | CCWGG | 3 cut(s) | 18, 630, 1028 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 815, 847 |
| AleI | CACNNNNGTG | 1 cut(s) | 566 |
| Alw21I | GWGCWC | 3 cut(s) | 51, 544, 799 |
| Alw26I | GTCTC | 3 cut(s) | 194, 579, 1007 |
| AlwI | GGATC | 3 cut(s) | 452, 606, 1057 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 19 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| Aor13HI | TCCGGA | 1 cut(s) | 43 |
| AoxI | GGCC | 2 cut(s) | 3, 878 |
| ApeKI | GCWGC | 6 cut(s) | 10, 28, 272, 661, 785, 1036 |
| ApoI | RAATTY | 1 cut(s) | 518 |
| AspLEI | GCGC | 5 cut(s) | 10, 33, 40, 670, 924 |
| AsuHPI | GGTGA | 4 cut(s) | 167, 181, 307, 755 |
| AsuNHI | GCTAGC | 1 cut(s) | 473 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| BanI | GGYRCC | 1 cut(s) | 99 |
| BanII | GRGCYC | 1 cut(s) | 51 |
| Bbv12I | GWGCWC | 3 cut(s) | 51, 544, 799 |
| BbvI | GCAGC | 5 cut(s) | 15, 259, 648, 772, 1048 |
| BccI | CCATC | 4 cut(s) | 416, 469, 853, 889 |
| BceAI | ACGGC | 1 cut(s) | 125 |
| BciT130I | CCWGG | 3 cut(s) | 20, 632, 1030 |
| BcoDI | GTCTC | 3 cut(s) | 194, 579, 1007 |
| BfaI | CTAG | 6 cut(s) | 287, 318, 416, 474, 554, 692 |
| BfmI | CTRYAG | 1 cut(s) | 11 |
| BglII | AGATCT | 1 cut(s) | 76 |
| BisI | GCNGC | 7 cut(s) | 6, 11, 29, 273, 662, 786, 1037 |
| BlsI | GCNGC | 7 cut(s) | 7, 12, 30, 274, 663, 787, 1038 |
| Bme1390I | CCNGG | 3 cut(s) | 20, 632, 1030 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmiI | GGNNCC | 2 cut(s) | 101, 339 |
| BmrFI | CCNGG | 3 cut(s) | 20, 632, 1030 |
| BmsI | GCATC | 5 cut(s) | 49, 148, 348, 679, 961 |
| BmtI | GCTAGC | 1 cut(s) | 477 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 563, 595 |
| BpmI | CTGGAG | 1 cut(s) | 41 |
| BpuEI | CTTGAG | 3 cut(s) | 98, 203, 401 |
| Bsa29I | ATCGAT | 2 cut(s) | 999, 1124 |
| BsaJI | CCNNGG | 2 cut(s) | 631, 1029 |
| BsaWI | WCCGGW | 1 cut(s) | 43 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 265, 292 |
| Bse118I | RCCGGY | 1 cut(s) | 876 |
| Bse3DI | GCAATG | 1 cut(s) | 912 |
| BseAI | TCCGGA | 1 cut(s) | 43 |
| BseBI | CCWGG | 3 cut(s) | 20, 632, 1030 |
| BseCI | ATCGAT | 2 cut(s) | 999, 1124 |
| BseDI | CCNNGG | 2 cut(s) | 631, 1029 |
| BseGI | GGATG | 3 cut(s) | 40, 670, 949 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 265, 292 |
| BseMI | GCAATG | 1 cut(s) | 912 |
| BseMII | CTCAG | 2 cut(s) | 516, 594 |
| BseRI | GAGGAG | 1 cut(s) | 1025 |
| BseXI | GCAGC | 5 cut(s) | 15, 259, 648, 772, 1048 |
| BsgI | GTGCAG | 2 cut(s) | 609, 1055 |
| Bsh1236I | CGCG | 2 cut(s) | 8, 38 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1128 |
| BshFI | GGCC | 2 cut(s) | 5, 880 |
| BshNI | GGYRCC | 1 cut(s) | 99 |
| BshVI | ATCGAT | 2 cut(s) | 999, 1124 |
| BsiEI | CGRYCG | 1 cut(s) | 1128 |
| BsiHKAI | GWGCWC | 3 cut(s) | 51, 544, 799 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BsiSI | CCGG | 2 cut(s) | 44, 877 |
| BslFI | GGGAC | 2 cut(s) | 601, 709 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 265, 292 |
| BsmAI | GTCTC | 3 cut(s) | 194, 579, 1007 |
| BsmBI | CGTCTC | 1 cut(s) | 1007 |
| BsmFI | GGGAC | 2 cut(s) | 601, 709 |
| BsnI | GGCC | 2 cut(s) | 5, 880 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| Bsp1286I | GDGCHC | 3 cut(s) | 51, 544, 799 |
| Bsp13I | TCCGGA | 1 cut(s) | 43 |
| Bsp1407I | TGTACA | 1 cut(s) | 775 |
| Bsp143I | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| BspACI | CCGC | 2 cut(s) | 6, 1133 |
| BspANI | GGCC | 2 cut(s) | 5, 880 |
| BspCNI | CTCAG | 2 cut(s) | 517, 593 |
| BspDI | ATCGAT | 2 cut(s) | 999, 1124 |
| BspEI | TCCGGA | 1 cut(s) | 43 |
| BspFNI | CGCG | 2 cut(s) | 8, 38 |
| BspLI | GGNNCC | 2 cut(s) | 101, 339 |
| BspMAI | CTGCAG | 1 cut(s) | 15 |
| BspOI | GCTAGC | 1 cut(s) | 477 |
| BspPI | GGATC | 3 cut(s) | 452, 606, 1057 |
| BspQI | GCTCTTC | 2 cut(s) | 549, 959 |
| BspT107I | GGYRCC | 1 cut(s) | 99 |
| BsrDI | GCAATG | 1 cut(s) | 912 |
| BsrFI | RCCGGY | 1 cut(s) | 876 |
| BsrGI | TGTACA | 1 cut(s) | 775 |
| BssAI | RCCGGY | 1 cut(s) | 876 |
| BssECI | CCNNGG | 2 cut(s) | 631, 1029 |
| BssMI | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| Bst2UI | CCWGG | 3 cut(s) | 20, 632, 1030 |
| Bst4CI | ACNGT | 5 cut(s) | 171, 255, 443, 1018, 1091 |
| Bst6I | CTCTTC | 2 cut(s) | 549, 959 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 233 |
| BstAUI | TGTACA | 1 cut(s) | 775 |
| BstC8I | GCNNGC | 5 cut(s) | 51, 225, 475, 666, 878 |
| BstDEI | CTNAG | 2 cut(s) | 525, 580 |
| BstF5I | GGATG | 3 cut(s) | 40, 670, 949 |
| BstFNI | CGCG | 2 cut(s) | 8, 38 |
| BstHHI | GCGC | 5 cut(s) | 10, 33, 40, 670, 924 |
| BstKTI | GATC | 7 cut(s) | 79, 460, 601, 892, 1003, 1065, 1128 |
| BstMAI | GTCTC | 3 cut(s) | 194, 579, 1007 |
| BstMBI | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| BstMCI | CGRYCG | 1 cut(s) | 1128 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 37, 46, 158, 233, 667, 794, 803, 1081 |
| BstNI | CCWGG | 3 cut(s) | 20, 632, 1030 |
| BstNSI | RCATGY | 1 cut(s) | 1025 |
| BstSCI | CCNGG | 3 cut(s) | 18, 630, 1028 |
| BstSFI | CTRYAG | 1 cut(s) | 11 |
| BstUI | CGCG | 2 cut(s) | 8, 38 |
| BstV1I | GCAGC | 5 cut(s) | 15, 259, 648, 772, 1048 |
| BstX2I | RGATCY | 3 cut(s) | 76, 598, 1062 |
| BstYI | RGATCY | 3 cut(s) | 76, 598, 1062 |
| Bsu15I | ATCGAT | 2 cut(s) | 999, 1124 |
| BsuRI | GGCC | 2 cut(s) | 5, 880 |
| BsuTUI | ATCGAT | 2 cut(s) | 999, 1124 |
| BtsCI | GGATG | 3 cut(s) | 40, 670, 949 |
| BtsIMutI | CAGTG | 1 cut(s) | 573 |
| Cac8I | GCNNGC | 5 cut(s) | 51, 225, 475, 666, 878 |
| CaiI | CAGNNNCTG | 1 cut(s) | 19 |
| CfoI | GCGC | 5 cut(s) | 10, 33, 40, 670, 924 |
| Cfr10I | RCCGGY | 1 cut(s) | 876 |
| ClaI | ATCGAT | 2 cut(s) | 999, 1124 |
| CseI | GACGC | 1 cut(s) | 1143 |
| Csp6I | GTAC | 5 cut(s) | 16, 61, 82, 256, 776 |
| CviAII | CATG | 1 cut(s) | 1022 |
| CviQI | GTAC | 5 cut(s) | 16, 61, 82, 256, 776 |
| DdeI | CTNAG | 2 cut(s) | 525, 580 |
| DpnI | GATC | 7 cut(s) | 78, 459, 600, 891, 1002, 1064, 1127 |
| DpnII | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| EaeI | YGGCCR | 2 cut(s) | 3, 878 |
| Eam1104I | CTCTTC | 2 cut(s) | 549, 959 |
| EarI | CTCTTC | 2 cut(s) | 549, 959 |
| EciI | GGCGGA | 1 cut(s) | 1148 |
| Ecl136II | GAGCTC | 1 cut(s) | 49 |
| Eco24I | GRGCYC | 1 cut(s) | 51 |
| Eco53kI | GAGCTC | 1 cut(s) | 49 |
| Eco57I | CTGAAG | 2 cut(s) | 856, 906 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoICRI | GAGCTC | 1 cut(s) | 49 |
| EcoRII | CCWGG | 3 cut(s) | 18, 630, 1028 |
| EcoT38I | GRGCYC | 1 cut(s) | 51 |
| Esp3I | CGTCTC | 1 cut(s) | 1007 |
| FaeI | CATG | 1 cut(s) | 1025 |
| FaqI | GGGAC | 2 cut(s) | 601, 709 |
| FatI | CATG | 1 cut(s) | 1021 |
| Fnu4HI | GCNGC | 7 cut(s) | 6, 11, 29, 273, 662, 786, 1037 |
| FokI | GGATG | 3 cut(s) | 27, 657, 956 |
| FriOI | GRGCYC | 1 cut(s) | 51 |
| Fsp4HI | GCNGC | 7 cut(s) | 6, 11, 29, 273, 662, 786, 1037 |
| FspBI | CTAG | 6 cut(s) | 287, 318, 416, 474, 554, 692 |
| FspI | TGCGCA | 2 cut(s) | 32, 669 |
| GlaI | GCGC | 5 cut(s) | 9, 32, 39, 669, 923 |
| GluI | GCNGC | 7 cut(s) | 6, 11, 29, 273, 662, 786, 1037 |
| GsuI | CTGGAG | 1 cut(s) | 41 |
| HaeIII | GGCC | 2 cut(s) | 5, 880 |
| HapII | CCGG | 2 cut(s) | 44, 877 |
| HgaI | GACGC | 1 cut(s) | 1143 |
| HhaI | GCGC | 5 cut(s) | 10, 33, 40, 670, 924 |
| Hin1II | CATG | 1 cut(s) | 1025 |
| Hin6I | GCGC | 5 cut(s) | 8, 31, 38, 668, 922 |
| HinP1I | GCGC | 5 cut(s) | 8, 31, 38, 668, 922 |
| HindIII | AAGCTT | 2 cut(s) | 305, 827 |
| HinfI | GANTC | 3 cut(s) | 572, 584, 1054 |
| HpaII | CCGG | 2 cut(s) | 44, 877 |
| HphI | GGTGA | 4 cut(s) | 167, 181, 307, 755 |
| Hpy166II | GTNNAC | 2 cut(s) | 776, 778 |
| Hpy188I | TCNGA | 4 cut(s) | 583, 886, 894, 984 |
| Hpy188III | TCNNGA | 6 cut(s) | 44, 249, 416, 515, 761, 1158 |
| Hpy8I | GTNNAC | 2 cut(s) | 776, 778 |
| HpyAV | CCTTC | 4 cut(s) | 224, 259, 284, 698 |
| HpyCH4III | ACNGT | 5 cut(s) | 171, 255, 443, 1018, 1091 |
| HpyCH4V | TGCA | 7 cut(s) | 13, 361, 405, 626, 917, 1021, 1036 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 37, 46, 158, 233, 667, 794, 803, 1081 |
| HpyF3I | CTNAG | 2 cut(s) | 525, 580 |
| Hsp92II | CATG | 1 cut(s) | 1025 |
| HspAI | GCGC | 5 cut(s) | 8, 31, 38, 668, 922 |
| Kpn2I | TCCGGA | 1 cut(s) | 43 |
| KroI | GCCGGC | 1 cut(s) | 876 |
| KroNI | GCCGGC | 1 cut(s) | 878 |
| Kzo9I | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| LguI | GCTCTTC | 2 cut(s) | 549, 959 |
| LmnI | GCTCC | 2 cut(s) | 46, 949 |
| Lsp1109I | GCAGC | 5 cut(s) | 15, 259, 648, 772, 1048 |
| LweI | GCATC | 5 cut(s) | 49, 148, 348, 679, 961 |
| MaeI | CTAG | 6 cut(s) | 287, 318, 416, 474, 554, 692 |
| MaeIII | GTNAC | 1 cut(s) | 281 |
| MalI | GATC | 7 cut(s) | 78, 459, 600, 891, 1002, 1064, 1127 |
| MboI | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| MboII | GAAGA | 9 cut(s) | 431, 536, 716, 835, 850, 862, 899, 947, 976 |
| MflI | RGATCY | 3 cut(s) | 76, 598, 1062 |
| MhlI | GDGCHC | 3 cut(s) | 51, 544, 799 |
| MluCI | AATT | 5 cut(s) | 64, 181, 518, 764, 864 |
| MlyI | GAGTC | 1 cut(s) | 581 |
| MmeI | TCCRAC | 1 cut(s) | 1077 |
| MnlI | CCTC | 6 cut(s) | 81, 328, 934, 982, 1003, 1123 |
| MroI | TCCGGA | 1 cut(s) | 43 |
| MroNI | GCCGGC | 1 cut(s) | 876 |
| MseI | TTAA | 4 cut(s) | 164, 354, 681, 843 |
| MslI | CAYNNNNRTG | 2 cut(s) | 356, 566 |
| MspI | CCGG | 2 cut(s) | 44, 877 |
| MspR9I | CCNGG | 3 cut(s) | 20, 632, 1030 |
| MvaI | CCWGG | 3 cut(s) | 20, 632, 1030 |
| MvnI | CGCG | 2 cut(s) | 8, 38 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 37, 46, 158, 233, 667, 794, 803, 1081 |
| NaeI | GCCGGC | 1 cut(s) | 878 |
| NdeII | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| NgoMIV | GCCGGC | 1 cut(s) | 876 |
| NheI | GCTAGC | 1 cut(s) | 473 |
| NlaIII | CATG | 1 cut(s) | 1025 |
| NlaIV | GGNNCC | 2 cut(s) | 101, 339 |
| NsbI | TGCGCA | 2 cut(s) | 32, 669 |
| NspI | RCATGY | 1 cut(s) | 1025 |
| OliI | CACNNNNGTG | 1 cut(s) | 566 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PciSI | GCTCTTC | 2 cut(s) | 549, 959 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 126 |
| PdiI | GCCGGC | 1 cut(s) | 878 |
| PfeI | GAWTC | 2 cut(s) | 584, 1054 |
| PflFI | GACNNNGTC | 1 cut(s) | 1103 |
| PkrI | GCNGC | 7 cut(s) | 7, 12, 30, 274, 663, 787, 1038 |
| Ple19I | CGATCG | 1 cut(s) | 1128 |
| PleI | GAGTC | 1 cut(s) | 580 |
| PpsI | GAGTC | 1 cut(s) | 580 |
| Psp124BI | GAGCTC | 1 cut(s) | 51 |
| Psp6I | CCWGG | 3 cut(s) | 18, 630, 1028 |
| PspGI | CCWGG | 3 cut(s) | 18, 630, 1028 |
| PspN4I | GGNNCC | 2 cut(s) | 101, 339 |
| PspXI | VCTCGAGB | 1 cut(s) | 119 |
| PstI | CTGCAG | 1 cut(s) | 15 |
| PstNI | CAGNNNCTG | 1 cut(s) | 19 |
| PsuI | RGATCY | 3 cut(s) | 76, 598, 1062 |
| PsyI | GACNNNGTC | 1 cut(s) | 1103 |
| PvuI | CGATCG | 1 cut(s) | 1128 |
| RsaI | GTAC | 5 cut(s) | 17, 62, 83, 257, 777 |
| RsaNI | GTAC | 5 cut(s) | 16, 61, 82, 256, 776 |
| RseI | CAYNNNNRTG | 2 cut(s) | 356, 566 |
| SacI | GAGCTC | 1 cut(s) | 51 |
| SapI | GCTCTTC | 2 cut(s) | 549, 959 |
| SaqAI | TTAA | 4 cut(s) | 164, 354, 681, 843 |
| SatI | GCNGC | 7 cut(s) | 6, 11, 29, 273, 662, 786, 1037 |
| Sau3AI | GATC | 7 cut(s) | 76, 457, 598, 889, 1000, 1062, 1125 |
| SchI | GAGTC | 1 cut(s) | 581 |
| ScrFI | CCNGG | 3 cut(s) | 20, 632, 1030 |
| SduI | GDGCHC | 3 cut(s) | 51, 544, 799 |
| SfaNI | GCATC | 5 cut(s) | 49, 148, 348, 679, 961 |
| SfcI | CTRYAG | 1 cut(s) | 11 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 356, 566 |
| SmlI | CTYRAG | 4 cut(s) | 113, 119, 218, 380 |
| SmoI | CTYRAG | 4 cut(s) | 113, 119, 218, 380 |
| Sse9I | AATT | 5 cut(s) | 64, 181, 518, 764, 864 |
| SsiI | CCGC | 2 cut(s) | 6, 1133 |
| SspI | AATATT | 1 cut(s) | 372 |
| SspMI | CTAG | 6 cut(s) | 287, 318, 416, 474, 554, 692 |
| SstI | GAGCTC | 1 cut(s) | 51 |
| StyD4I | CCNGG | 3 cut(s) | 18, 630, 1028 |
| TaaI | ACNGT | 5 cut(s) | 171, 255, 443, 1018, 1091 |
| TaqI | TCGA | 5 cut(s) | 120, 250, 999, 1124, 1128 |
| TasI | AATT | 5 cut(s) | 64, 181, 518, 764, 864 |
| TatI | WGTACW | 1 cut(s) | 775 |
| TauI | GCSGC | 1 cut(s) | 8 |
| TfiI | GAWTC | 2 cut(s) | 584, 1054 |
| Tru1I | TTAA | 4 cut(s) | 164, 354, 681, 843 |
| Tru9I | TTAA | 4 cut(s) | 164, 354, 681, 843 |
| TscAI | CASTG | 1 cut(s) | 573 |
| TseI | GCWGC | 6 cut(s) | 10, 28, 272, 661, 785, 1036 |
| TspDTI | ATGAA | 2 cut(s) | 175, 968 |
| TspGWI | ACGGA | 2 cut(s) | 500, 964 |
| TspRI | CASTG | 1 cut(s) | 573 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1103 |
| XapI | RAATTY | 1 cut(s) | 518 |
| XbaI | TCTAGA | 1 cut(s) | 415 |
| XceI | RCATGY | 1 cut(s) | 1025 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XspI | CTAG | 6 cut(s) | 287, 318, 416, 474, 554, 692 |