pycom17g02820

MORC family CW-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0008153
Physical Location & Seq
Reverse (-)
1868878 .. 1871982
3105 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1116 bp
ATGGAACTAGATTTTAATTCTGATCCTGAGGATATTTGTATTAATGGCTACAAAGAACTTGGCAATTTGAAACGTCATGTTCAGCATGTTGCTAACCTGTATCGGCACTCTCTCCGTGCATATGCATCAGTCCTGTATAGGCAGCTACCACAGAACTTTCGGATAATTTTGCGTGGACAAGATGTTGAGCGCCGTAATGTTGCCTTGTATCTCAATTTTGTTGAGTTAATCAAATATAGGCCGAAAACTGAAGGAACTATCAAGTATAGGCCGACAACTGATGGAAATCTGGAGCTTGAATATATTACCGCAATAGGTTTTTGGAAGGAAGCTGCACGTGCTAATATTCATGGTTTCAATATCTACCATCGGAATCGTCTGATACTGCCATTTTGGCGTGTACTTAAACAAATGACAGGCAGTACCGGGAGAGGAGTTGTCGGTGTCCTGGAACCAAATTTTATTCAGCCTACTCACAATAAGCAAGATTTTGAAAAAACTTCCCTCTTCCACAAGCTTGAAGATCGTTTAAAGCAAATGACGGTGGAGTACTGGAAGAAATATTCCAAAGTCGCCGGTTATCAGACTGTGAAAAAAGTTCGTTCTAAGAGACTGCGTCGTCCAAAATCACCTTCTTCAAGAACTAGAAATTCTTTGCACCTAGCTTTGTTACTGAATCACGGTTCTCATGAAGCATCTACTGGTGCAGCGGGATCCTTAGAAGATCCCCAAGTCGCCGTATCAGATGCTTCATCCAGTGGACTGCAAATAACAGCAGATATCTCCTCAGAAGGAAACGTCAAAAAGAGGAAGGATCTTGATACGCCATTGGAACCACAACTTGCGAAAAGGCACATGGGACATGACGGAACTGATGTCCAGTACATTACTCAACAGTCTGAGAATAGCATCGAGAACACGAAGCAAATTTCACAGAAGATAATTTTGATTCGAGAAAACAGAAGGCTTCGGTCAGAGATGCTCGCGGCGGAAAAACGGATTGAAGAACTTAACTTGAAGATGCAACAACGTATGCGTGAACTCAAGGATGAGCAGCGACGCGGAGGTGAACTGGAGAATGAACTGACTCAGTTTTTGATTCAATCATACGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HATPase_c_3

Protein Analysis

372

Amino Acids

42.98

Weight (kDa)

9.71

Isoelectric Point (pI)

50.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Morc6_S5 PF17942 36 - 185 3.1e-53 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 618
AccII CGCG 2 cut(s) 986, 1062
AciI CCGC 5 cut(s) 309, 710, 986, 989, 1062
AclWI GGATC 5 cut(s) 17, 708, 719, 721, 822
AcsI RAATTY 3 cut(s) 457, 649, 927
AcuI CTGAAG 1 cut(s) 270
AcvI CACGTG 1 cut(s) 338
AfaI GTAC 4 cut(s) 402, 424, 551, 884
AgsI TTSAA 9 cut(s) 70, 299, 358, 494, 521, 639, 1004, 1018, 1103
AjnI CCWGG 1 cut(s) 447
AjuI GAANNNNNNNTTGG 2 cut(s) 616, 648
AluBI AGCT 5 cut(s) 145, 295, 332, 517, 665
AluI AGCT 5 cut(s) 145, 295, 332, 517, 665
Alw26I GTCTC 1 cut(s) 604
AlwI GGATC 5 cut(s) 17, 708, 719, 721, 822
AoxI GGCC 2 cut(s) 239, 269
ApeKI GCWGC 4 cut(s) 142, 332, 707, 1054
ApoI RAATTY 3 cut(s) 457, 649, 927
ArsI GACNNNNNNTTYG 2 cut(s) 1078, 1110
AseI ATTAAT 1 cut(s) 42
AspLEI GCGC 1 cut(s) 192
AsuC2I CCSGG 1 cut(s) 427
AsuHPI GGTGA 2 cut(s) 621, 1079
AxyI CCTNAGG 1 cut(s) 27
BamHI GGATCC 1 cut(s) 713
BbrPI CACGTG 1 cut(s) 338
BbvI GCAGC 4 cut(s) 154, 319, 719, 1066
BccI CCATC 2 cut(s) 275, 375
BceAI ACGGC 2 cut(s) 177, 722
BciT130I CCWGG 1 cut(s) 449
BcnI CCSGG 1 cut(s) 427
BcoDI GTCTC 1 cut(s) 604
BfaI CTAG 3 cut(s) 8, 645, 662
BfoI RGCGCY 1 cut(s) 193
BglI GCCNNNNNGGC 1 cut(s) 394
BisI GCNGC 5 cut(s) 143, 333, 708, 987, 1055
BlsI GCNGC 5 cut(s) 144, 334, 709, 988, 1056
BmcAI AGTACT 1 cut(s) 551
Bme1390I CCNGG 2 cut(s) 427, 449
BmiI GGNNCC 3 cut(s) 453, 715, 834
BmrFI CCNGG 2 cut(s) 427, 449
BmsI GCATC 6 cut(s) 134, 704, 736, 918, 969, 1011
BpmI CTGGAG 2 cut(s) 311, 1094
BpuEI CTTGAG 1 cut(s) 1028
BpuMI CCSGG 1 cut(s) 427
BsaAI YACGTR 1 cut(s) 338
BsaBI GATNNNNATC 1 cut(s) 285
Bse118I RCCGGY 1 cut(s) 575
Bse1I ACTGG 5 cut(s) 557, 706, 756, 880, 1077
Bse21I CCTNAGG 1 cut(s) 27
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 1 cut(s) 449
BseGI GGATG 2 cut(s) 752, 1054
BseJI GATNNNNATC 1 cut(s) 285
BseMII CTCAG 4 cut(s) 18, 801, 891, 1103
BseNI ACTGG 5 cut(s) 557, 706, 756, 880, 1077
BseRI GAGGAG 2 cut(s) 447, 775
BseXI GCAGC 4 cut(s) 154, 319, 719, 1066
BsgI GTGCAG 2 cut(s) 318, 726
Bsh1236I CGCG 2 cut(s) 986, 1062
BshFI GGCC 2 cut(s) 241, 271
BsiSI CCGG 2 cut(s) 426, 576
BslFI GGGAC 1 cut(s) 873
BsmAI GTCTC 1 cut(s) 604
BsmFI GGGAC 1 cut(s) 873
BsnI GGCC 2 cut(s) 241, 271
Bsp143I GATC 5 cut(s) 22, 523, 713, 724, 814
BspACI CCGC 5 cut(s) 309, 710, 986, 989, 1062
BspANI GGCC 2 cut(s) 241, 271
BspCNI CTCAG 4 cut(s) 19, 800, 892, 1102
BspFNI CGCG 2 cut(s) 986, 1062
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 3 cut(s) 453, 715, 834
BspPI GGATC 5 cut(s) 17, 708, 719, 721, 822
BsrFI RCCGGY 1 cut(s) 575
BsrI ACTGG 5 cut(s) 557, 706, 756, 880, 1077
BssAI RCCGGY 1 cut(s) 575
BssMI GATC 5 cut(s) 22, 523, 713, 724, 814
Bst2UI CCWGG 1 cut(s) 449
Bst4CI ACNGT 4 cut(s) 544, 589, 683, 897
Bst6I CTCTTC 1 cut(s) 512
BstBAI YACGTR 1 cut(s) 338
BstC8I GCNNGC 1 cut(s) 984
BstDEI CTNAG 6 cut(s) 27, 606, 718, 787, 900, 1089
BstF5I GGATG 2 cut(s) 752, 1054
BstFNI CGCG 2 cut(s) 986, 1062
BstH2I RGCGCY 1 cut(s) 193
BstHHI GCGC 1 cut(s) 192
BstKTI GATC 5 cut(s) 25, 526, 716, 727, 817
BstMAI GTCTC 1 cut(s) 604
BstMBI GATC 5 cut(s) 22, 523, 713, 724, 814
BstMWI GCNNNNNNNGC 2 cut(s) 338, 394
BstNI CCWGG 1 cut(s) 449
BstNSI RCATGY 1 cut(s) 89
BstSCI CCNGG 2 cut(s) 425, 447
BstUI CGCG 2 cut(s) 986, 1062
BstV1I GCAGC 4 cut(s) 154, 319, 719, 1066
BstX2I RGATCY 3 cut(s) 713, 724, 814
BstYI RGATCY 3 cut(s) 713, 724, 814
Bsu36I CCTNAGG 1 cut(s) 27
BsuRI GGCC 2 cut(s) 241, 271
BtsCI GGATG 2 cut(s) 752, 1054
BtsIMutI CAGTG 1 cut(s) 763
Cac8I GCNNGC 1 cut(s) 984
CciI TCATGA 1 cut(s) 688
CfoI GCGC 1 cut(s) 192
Cfr10I RCCGGY 1 cut(s) 575
CseI GACGC 2 cut(s) 605, 1068
Csp6I GTAC 4 cut(s) 401, 423, 550, 883
CviAII CATG 6 cut(s) 77, 86, 350, 689, 856, 863
CviQI GTAC 4 cut(s) 401, 423, 550, 883
DdeI CTNAG 6 cut(s) 27, 606, 718, 787, 900, 1089
DpnI GATC 5 cut(s) 24, 525, 715, 726, 816
DpnII GATC 5 cut(s) 22, 523, 713, 724, 814
DraI TTTAAA 1 cut(s) 531
DrdI GACNNNNNNGTC 1 cut(s) 618
DseDI GACNNNNNNGTC 1 cut(s) 618
Eam1104I CTCTTC 1 cut(s) 512
EarI CTCTTC 1 cut(s) 512
EciI GGCGGA 1 cut(s) 1004
Eco32I GATATC 1 cut(s) 781
Eco57I CTGAAG 1 cut(s) 270
Eco72I CACGTG 1 cut(s) 338
Eco81I CCTNAGG 1 cut(s) 27
EcoRII CCWGG 1 cut(s) 447
EcoRV GATATC 1 cut(s) 781
EcoT22I ATGCAT 1 cut(s) 127
FaeI CATG 6 cut(s) 80, 89, 353, 692, 859, 866
FaqI GGGAC 1 cut(s) 873
FatI CATG 6 cut(s) 76, 85, 349, 688, 855, 862
FauI CCCGC 1 cut(s) 703
FauNDI CATATG 1 cut(s) 121
Fnu4HI GCNGC 5 cut(s) 143, 333, 708, 987, 1055
FokI GGATG 2 cut(s) 739, 1061
Fsp4HI GCNGC 5 cut(s) 143, 333, 708, 987, 1055
FspBI CTAG 3 cut(s) 8, 645, 662
GlaI GCGC 1 cut(s) 191
GluI GCNGC 5 cut(s) 143, 333, 708, 987, 1055
GsuI CTGGAG 2 cut(s) 311, 1094
HaeII RGCGCY 1 cut(s) 193
HaeIII GGCC 2 cut(s) 241, 271
HapII CCGG 2 cut(s) 426, 576
HgaI GACGC 2 cut(s) 605, 1068
HhaI GCGC 1 cut(s) 192
Hin1II CATG 6 cut(s) 80, 89, 353, 692, 859, 866
Hin6I GCGC 1 cut(s) 190
HinP1I GCGC 1 cut(s) 190
HindIII AAGCTT 1 cut(s) 515
HinfI GANTC 5 cut(s) 373, 676, 949, 1087, 1099
HpaII CCGG 2 cut(s) 426, 576
HphI GGTGA 2 cut(s) 621, 1079
Hpy166II GTNNAC 5 cut(s) 176, 401, 761, 1040, 1070
Hpy188I TCNGA 9 cut(s) 22, 162, 372, 381, 585, 745, 790, 901, 976
Hpy188III TCNNGA 7 cut(s) 26, 290, 639, 689, 818, 913, 953
Hpy8I GTNNAC 5 cut(s) 176, 401, 761, 1040, 1070
Hpy99I CGWCG 2 cut(s) 621, 1062
HpyAV CCTTC 6 cut(s) 245, 319, 642, 785, 805, 957
HpyCH4III ACNGT 4 cut(s) 544, 589, 683, 897
HpyCH4IV ACGT 4 cut(s) 73, 337, 798, 1030
HpyCH4V TGCA 7 cut(s) 119, 125, 335, 658, 707, 766, 1024
HpyF10VI GCNNNNNNNGC 2 cut(s) 338, 394
HpyF3I CTNAG 6 cut(s) 27, 606, 718, 787, 900, 1089
HpySE526I ACGT 4 cut(s) 73, 337, 798, 1030
Hsp92II CATG 6 cut(s) 80, 89, 353, 692, 859, 866
HspAI GCGC 1 cut(s) 190
Kzo9I GATC 5 cut(s) 22, 523, 713, 724, 814
LmnI GCTCC 1 cut(s) 292
Lsp1109I GCAGC 4 cut(s) 154, 319, 719, 1066
LweI GCATC 6 cut(s) 134, 704, 736, 918, 969, 1011
MaeI CTAG 3 cut(s) 8, 645, 662
MaeII ACGT 4 cut(s) 73, 337, 798, 1030
MaeIII GTNAC 1 cut(s) 669
MalI GATC 5 cut(s) 24, 525, 715, 726, 816
MboI GATC 5 cut(s) 22, 523, 713, 724, 814
MboII GAAGA 8 cut(s) 499, 533, 568, 627, 734, 949, 1016, 1030
MflI RGATCY 3 cut(s) 713, 724, 814
MluCI AATT 8 cut(s) 16, 64, 165, 214, 457, 649, 927, 942
MlyI GAGTC 1 cut(s) 1081
MnlI CCTC 6 cut(s) 22, 425, 515, 796, 801, 1058
Mph1103I ATGCAT 1 cut(s) 127
MseI TTAA 6 cut(s) 15, 42, 227, 405, 530, 1011
MspA1I CMGCKG 1 cut(s) 710
MspI CCGG 2 cut(s) 426, 576
MspR9I CCNGG 2 cut(s) 427, 449
MvaI CCWGG 1 cut(s) 449
MvnI CGCG 2 cut(s) 986, 1062
MwoI GCNNNNNNNGC 2 cut(s) 338, 394
NciI CCSGG 1 cut(s) 427
NdeI CATATG 1 cut(s) 121
NdeII GATC 5 cut(s) 22, 523, 713, 724, 814
NlaIII CATG 6 cut(s) 80, 89, 353, 692, 859, 866
NlaIV GGNNCC 3 cut(s) 453, 715, 834
NsiI ATGCAT 1 cut(s) 127
NspI RCATGY 1 cut(s) 89
PagI TCATGA 1 cut(s) 688
PfeI GAWTC 4 cut(s) 373, 676, 949, 1099
PflFI GACNNNGTC 1 cut(s) 615
PfoI TCCNGGA 1 cut(s) 447
PkrI GCNGC 5 cut(s) 144, 334, 709, 988, 1056
PleI GAGTC 1 cut(s) 1081
PmaCI CACGTG 1 cut(s) 338
PmlI CACGTG 1 cut(s) 338
PpsI GAGTC 1 cut(s) 1081
Ppu21I YACGTR 1 cut(s) 338
PshBI ATTAAT 1 cut(s) 42
Psp6I CCWGG 1 cut(s) 447
PspCI CACGTG 1 cut(s) 338
PspGI CCWGG 1 cut(s) 447
PspN4I GGNNCC 3 cut(s) 453, 715, 834
PsuI RGATCY 3 cut(s) 713, 724, 814
PsyI GACNNNGTC 1 cut(s) 615
RsaI GTAC 4 cut(s) 402, 424, 551, 884
RsaNI GTAC 4 cut(s) 401, 423, 550, 883
SaqAI TTAA 6 cut(s) 15, 42, 227, 405, 530, 1011
SatI GCNGC 5 cut(s) 143, 333, 708, 987, 1055
Sau3AI GATC 5 cut(s) 22, 523, 713, 724, 814
ScaI AGTACT 1 cut(s) 551
SchI GAGTC 1 cut(s) 1081
ScrFI CCNGG 2 cut(s) 427, 449
SfaNI GCATC 6 cut(s) 134, 704, 736, 918, 969, 1011
SmlI CTYRAG 1 cut(s) 1043
SmoI CTYRAG 1 cut(s) 1043
Sse9I AATT 8 cut(s) 16, 64, 165, 214, 457, 649, 927, 942
SsiI CCGC 5 cut(s) 309, 710, 986, 989, 1062
SspI AATATT 2 cut(s) 346, 563
SspMI CTAG 3 cut(s) 8, 645, 662
StyD4I CCNGG 2 cut(s) 425, 447
TaaI ACNGT 4 cut(s) 544, 589, 683, 897
TaiI ACGT 4 cut(s) 76, 340, 801, 1033
TaqI TCGA 2 cut(s) 912, 952
TaqII GACCGA 1 cut(s) 960
TasI AATT 8 cut(s) 16, 64, 165, 214, 457, 649, 927, 942
TatI WGTACW 3 cut(s) 400, 549, 882
TauI GCSGC 1 cut(s) 989
TfiI GAWTC 4 cut(s) 373, 676, 949, 1099
Tru1I TTAA 6 cut(s) 15, 42, 227, 405, 530, 1011
Tru9I TTAA 6 cut(s) 15, 42, 227, 405, 530, 1011
TscAI CASTG 1 cut(s) 763
TseI GCWGC 4 cut(s) 142, 332, 707, 1054
TspDTI ATGAA 4 cut(s) 338, 705, 741, 1095
TspGWI ACGGA 3 cut(s) 104, 882, 1012
TspRI CASTG 1 cut(s) 763
Tth111I GACNNNGTC 1 cut(s) 615
VspI ATTAAT 1 cut(s) 42
XapI RAATTY 3 cut(s) 457, 649, 927
XceI RCATGY 1 cut(s) 89
XspI CTAG 3 cut(s) 8, 645, 662
ZrmI AGTACT 1 cut(s) 551
Zsp2I ATGCAT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.