pycom17g04410

Glutaredoxin

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
3008620 .. 3010027
1408 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g04410.2

Sequence Viewer

Length: 1320 bp
ATGCATGTCCACCACCCGCCGCAGACCAAAGGTGACAGCTACCATGTCGTCGCCCTCACCTCCTCCACTTTAGGTTCTCTCAATCGCCCTGAAAACAGAGTAATTGCTAACGGATGCGATGATACCAACGAGGACATGATCGAGCACGGGAACAAGGAATTCTCAGTGGGACTAATCGAAGCCAAGACGTGGTCGAATATGATCGAAGCGAAAATCCCAAAAGTTGTGCCAAAAACTCCGACCAGGACGCCGCCGGGCGAGCCGGAGACGATCAATATATGGGAGTTGATGGAAGGCCTCGAGGACTTGAGCCCTCTCAGGTCGCCAGCCCATCACCTTCGGAGCTTTTCTTTCGACGTTGTTCGGGACCCGTGTCCGAGGCCGATTTCCCCTTCCGACCGCCAGAAATCGAGATTCCAAGAAAATGGGAACTCTCCCCCTAAGCCGCAGCCAATGTGGATTCAAATGTCGGATGACAATGATCAGGTGAAATCCAATTCTTTGATTGCAGATTTTGATCCGGATGTGATCTCCGCGTTCCGGAAATCATTATCGGAGATCAAATCCGAGGAAGATCCTTTCGATTTAGCGCATTTGGTAGTCAGCAAGGAGCCGGCTTGGGCCTGCAACGACGTATTGGAGGCCCAGGACAAGAAGGGCAGGGACAGAGTGGTATTGTACTTCACGAGCCTCCGAGGGGTACGGAAGACGTACGAGGATTGTTGCCACGTGCGGGTGATACTGAAGGGCATAGGGGTCCGGGTGGACGAGCGGGACGTGTCGATGCATTCGGTGTTCAAGGAGGAGCTGAGGGAGCTTCTCAAGGACAGGTACAATGAGGCTCCGTTGCCCAGAGTGTTTGTTGGGAATAAGTACGTTGGCGGAGCTGATGAGATTCGGCAATTGCACGAAGACGGGAAGCTCGAAAAGTTGCTCGATTCTTGTGAAAAATTGGAAGGCGGTTGTGGCGGCGGAGATGGTGGTGGATTTTGTGATGCTTGTGGGGATATAAGGTTTGTGCCTTGCGAAACATGTTCAGGGAGCTGTAAAATATATTACGAAGACATTGATCGCGACGACGAAGAAGAGAAGGAGGAGGCGGAGGAGGGTGAATCGGGGTTCCAACGCTGCCTGGATTGTAACGAAAATGGCCTAATACGCTGCCCCATATGTTTTGTTTGTTGTACAGTAAAGAGTTTTGGTACATTTGATGAGAAAAGAAAAAAAAAAACTGCAATAGGAAACAGTGGAATAATCTTTCAAGCAGATACAGGTTCCCTCAACCTATATCAGAAAGCCTTGCATTGTAATACTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

440

Amino Acids

49.18

Weight (kDa)

5.14

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012964)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 299
AccB7I CCANNNNNTGG 1 cut(s) 189
AccBSI CCGCTC 1 cut(s) 772
AccII CGCG 2 cut(s) 536, 1074
AccIII TCCGGA 2 cut(s) 520, 540
AclWI GGATC 2 cut(s) 512, 569
AcsI RAATTY 1 cut(s) 158
AcuI CTGAAG 1 cut(s) 764
AcvI CACGTG 1 cut(s) 730
AcyI GRCGYC 1 cut(s) 248
AfaI GTAC 7 cut(s) 680, 702, 713, 833, 875, 1186, 1204
AfiI CCNNNNNNNGG 4 cut(s) 189, 540, 697, 733
AflIII ACRYGT 2 cut(s) 777, 1031
AgsI TTSAA 3 cut(s) 464, 799, 1262
AjiI CACGTC 2 cut(s) 189, 778
AjnI CCWGG 3 cut(s) 242, 645, 1131
AluBI AGCT 7 cut(s) 39, 345, 808, 817, 887, 922, 1044
AluI AGCT 7 cut(s) 39, 345, 808, 817, 887, 922, 1044
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 1 cut(s) 260
AlwI GGATC 2 cut(s) 512, 569
Ama87I CYCGRG 1 cut(s) 299
Aor13HI TCCGGA 2 cut(s) 520, 540
AoxI GGCC 5 cut(s) 295, 380, 621, 642, 1150
ApeKI GCWGC 3 cut(s) 448, 1128, 1161
ApoI RAATTY 1 cut(s) 158
AspLEI GCGC 1 cut(s) 592
AspS9I GGNCC 4 cut(s) 367, 621, 643, 757
AsuC2I CCSGG 2 cut(s) 255, 761
AsuHPI GGTGA 6 cut(s) 44, 49, 326, 499, 748, 1121
AvaI CYCGRG 1 cut(s) 299
AvaII GGWCC 2 cut(s) 367, 757
BanII GRGCYC 1 cut(s) 314
BauI CACGAG 1 cut(s) 685
BbrPI CACGTG 1 cut(s) 730
BbsI GAAGAC 3 cut(s) 713, 918, 1068
Bbv12I GWGCWC 1 cut(s) 147
BbvCI CCTCAGC 1 cut(s) 809
BbvI GCAGC 3 cut(s) 460, 1115, 1148
BccI CCATC 3 cut(s) 283, 339, 971
BciT130I CCWGG 3 cut(s) 244, 647, 1133
BclI TGATCA 1 cut(s) 481
BcnI CCSGG 2 cut(s) 255, 761
BcoDI GTCTC 1 cut(s) 260
BisI GCNGC 7 cut(s) 20, 251, 446, 449, 970, 1129, 1162
BlsI GCNGC 7 cut(s) 21, 252, 447, 450, 971, 1130, 1163
Bme1390I CCNGG 5 cut(s) 244, 255, 647, 761, 1133
Bme18I GGWCC 2 cut(s) 367, 757
BmeT110I CYCGRG 1 cut(s) 299
BmgBI CACGTC 2 cut(s) 189, 778
BmgT120I GGNCC 4 cut(s) 367, 621, 643, 757
BmiI GGNNCC 7 cut(s) 368, 369, 612, 758, 843, 1121, 1276
BmrFI CCNGG 5 cut(s) 244, 255, 647, 761, 1133
BmsI GCATC 3 cut(s) 104, 774, 985
BoxI GACNNNNGTC 1 cut(s) 372
BpiI GAAGAC 3 cut(s) 713, 918, 1068
Bpu10I CCTNAGC 2 cut(s) 441, 809
BpuEI CTTGAG 2 cut(s) 328, 806
BpuMI CCSGG 2 cut(s) 255, 761
BsaAI YACGTR 1 cut(s) 730
BsaBI GATNNNNATC 1 cut(s) 516
BsaHI GRCGYC 1 cut(s) 248
BsaJI CCNNGG 4 cut(s) 377, 567, 645, 694
BsaWI WCCGGW 2 cut(s) 520, 540
Bsc4I CCNNNNNNNGG 4 cut(s) 189, 540, 697, 733
Bse118I RCCGGY 1 cut(s) 613
Bse8I GATNNNNATC 1 cut(s) 516
BseAI TCCGGA 2 cut(s) 520, 540
BseBI CCWGG 3 cut(s) 244, 647, 1133
BseDI CCNNGG 4 cut(s) 377, 567, 645, 694
BseGI GGATG 3 cut(s) 119, 478, 529
BseJI GATNNNNATC 1 cut(s) 516
BseLI CCNNNNNNNGG 4 cut(s) 189, 540, 697, 733
BseMII CTCAG 3 cut(s) 177, 331, 800
BseRI GAGGAG 4 cut(s) 52, 818, 1109, 1118
BseXI GCAGC 3 cut(s) 460, 1115, 1148
Bsh1236I CGCG 2 cut(s) 536, 1074
Bsh1285I CGRYCG 1 cut(s) 400
BshFI GGCC 5 cut(s) 297, 382, 623, 644, 1152
BsiEI CGRYCG 1 cut(s) 400
BsiHKAI GWGCWC 1 cut(s) 147
BsiHKCI CYCGRG 1 cut(s) 299
BsiSI CCGG 6 cut(s) 254, 263, 521, 541, 614, 760
BsiWI CGTACG 1 cut(s) 711
BslFI GGGAC 4 cut(s) 183, 380, 677, 788
BslI CCNNNNNNNGG 4 cut(s) 189, 540, 697, 733
BsmAI GTCTC 1 cut(s) 260
BsmBI CGTCTC 1 cut(s) 260
BsmFI GGGAC 4 cut(s) 183, 380, 677, 788
BsmI GAATGC 1 cut(s) 787
BsnI GGCC 5 cut(s) 297, 382, 623, 644, 1152
BsoBI CYCGRG 1 cut(s) 299
Bsp1286I GDGCHC 2 cut(s) 147, 314
Bsp13I TCCGGA 2 cut(s) 520, 540
Bsp1407I TGTACA 1 cut(s) 1184
Bsp143I GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
Bsp68I TCGCGA 1 cut(s) 1074
BspANI GGCC 5 cut(s) 297, 382, 623, 644, 1152
BspCNI CTCAG 3 cut(s) 176, 330, 801
BspEI TCCGGA 2 cut(s) 520, 540
BspFNI CGCG 2 cut(s) 536, 1074
BspLI GGNNCC 7 cut(s) 368, 369, 612, 758, 843, 1121, 1276
BspPI GGATC 2 cut(s) 512, 569
BsrBI CCGCTC 1 cut(s) 772
BsrFI RCCGGY 1 cut(s) 613
BsrGI TGTACA 1 cut(s) 1184
BssAI RCCGGY 1 cut(s) 613
BssECI CCNNGG 4 cut(s) 377, 567, 645, 694
BssMI GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
BssNI GRCGYC 1 cut(s) 248
BssSI CACGAG 1 cut(s) 685
Bst2BI CACGAG 1 cut(s) 685
Bst2UI CCWGG 3 cut(s) 244, 647, 1133
Bst4CI ACNGT 2 cut(s) 1189, 1247
Bst6I CTCTTC 1 cut(s) 1080
BstACI GRCGYC 1 cut(s) 248
BstAUI TGTACA 1 cut(s) 1184
BstBAI YACGTR 1 cut(s) 730
BstC8I GCNNGC 4 cut(s) 260, 327, 615, 625
BstDEI CTNAG 4 cut(s) 163, 317, 441, 809
BstF5I GGATG 3 cut(s) 119, 478, 529
BstFNI CGCG 2 cut(s) 536, 1074
BstHHI GCGC 1 cut(s) 592
BstKTI GATC 9 cut(s) 141, 204, 273, 484, 520, 531, 561, 577, 1072
BstMAI GTCTC 1 cut(s) 260
BstMBI GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
BstMCI CGRYCG 1 cut(s) 400
BstMWI GCNNNNNNNGC 4 cut(s) 259, 814, 966, 1158
BstNI CCWGG 3 cut(s) 244, 647, 1133
BstNSI RCATGY 2 cut(s) 8, 1035
BstPAI GACNNNNGTC 1 cut(s) 372
BstSCI CCNGG 5 cut(s) 242, 253, 645, 759, 1131
BstUI CGCG 2 cut(s) 536, 1074
BstV1I GCAGC 3 cut(s) 460, 1115, 1148
BstV2I GAAGAC 3 cut(s) 713, 918, 1068
BstX2I RGATCY 1 cut(s) 574
BstXI CCANNNNNNTGG 1 cut(s) 425
BstYI RGATCY 1 cut(s) 574
BsuRI GGCC 5 cut(s) 297, 382, 623, 644, 1152
BtgZI GCGATG 1 cut(s) 132
BtrI CACGTC 2 cut(s) 189, 778
BtsCI GGATG 3 cut(s) 119, 478, 529
BtsIMutI CAGTG 2 cut(s) 171, 1252
BtuMI TCGCGA 1 cut(s) 1074
Cac8I GCNNGC 4 cut(s) 260, 327, 615, 625
CfoI GCGC 1 cut(s) 592
Cfr10I RCCGGY 1 cut(s) 613
Cfr13I GGNCC 4 cut(s) 367, 621, 643, 757
CseI GACGC 1 cut(s) 256
Csp6I GTAC 7 cut(s) 679, 701, 712, 832, 874, 1185, 1203
CviAII CATG 4 cut(s) 5, 44, 136, 1032
CviQI GTAC 7 cut(s) 679, 701, 712, 832, 874, 1185, 1203
DdeI CTNAG 4 cut(s) 163, 317, 441, 809
DpnI GATC 9 cut(s) 140, 203, 272, 483, 519, 530, 560, 576, 1071
DpnII GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
Eam1104I CTCTTC 1 cut(s) 1080
EarI CTCTTC 1 cut(s) 1080
EciI GGCGGA 3 cut(s) 897, 987, 1115
Eco147I AGGCCT 1 cut(s) 297
Eco24I GRGCYC 1 cut(s) 314
Eco47I GGWCC 2 cut(s) 367, 757
Eco57I CTGAAG 1 cut(s) 764
Eco72I CACGTG 1 cut(s) 730
Eco88I CYCGRG 1 cut(s) 299
EcoO109I RGGNCCY 1 cut(s) 367
EcoRI GAATTC 1 cut(s) 158
EcoRII CCWGG 3 cut(s) 242, 645, 1131
EcoT22I ATGCAT 2 cut(s) 6, 789
EcoT38I GRGCYC 1 cut(s) 314
Esp3I CGTCTC 1 cut(s) 260
FaeI CATG 4 cut(s) 8, 47, 139, 1035
FaqI GGGAC 4 cut(s) 183, 380, 677, 788
FatI CATG 4 cut(s) 4, 43, 135, 1031
FauI CCCGC 3 cut(s) 24, 726, 765
FauNDI CATATG 1 cut(s) 1169
FbaI TGATCA 1 cut(s) 481
Fnu4HI GCNGC 7 cut(s) 20, 251, 446, 449, 970, 1129, 1162
FokI GGATG 3 cut(s) 126, 485, 536
FriOI GRGCYC 1 cut(s) 314
Fsp4HI GCNGC 7 cut(s) 20, 251, 446, 449, 970, 1129, 1162
GlaI GCGC 1 cut(s) 591
GluI GCNGC 7 cut(s) 20, 251, 446, 449, 970, 1129, 1162
HaeIII GGCC 5 cut(s) 297, 382, 623, 644, 1152
HapII CCGG 6 cut(s) 254, 263, 521, 541, 614, 760
HgaI GACGC 1 cut(s) 256
HhaI GCGC 1 cut(s) 592
Hin1I GRCGYC 1 cut(s) 248
Hin1II CATG 4 cut(s) 8, 47, 139, 1035
Hin6I GCGC 1 cut(s) 590
HinP1I GCGC 1 cut(s) 590
HinfI GANTC 5 cut(s) 414, 460, 895, 938, 1112
HpaII CCGG 6 cut(s) 254, 263, 521, 541, 614, 760
HphI GGTGA 6 cut(s) 44, 49, 326, 499, 748, 1121
Hpy166II GTNNAC 2 cut(s) 10, 766
Hpy188I TCNGA 9 cut(s) 240, 342, 378, 397, 472, 556, 568, 695, 1293
Hpy188III TCNNGA 6 cut(s) 365, 411, 521, 541, 685, 1073
Hpy8I GTNNAC 2 cut(s) 10, 766
Hpy99I CGWCG 5 cut(s) 53, 359, 635, 1079, 1082
HpyAV CCTTC 7 cut(s) 287, 347, 402, 649, 739, 950, 1084
HpyCH4III ACNGT 2 cut(s) 1189, 1247
HpyCH4IV ACGT 7 cut(s) 188, 357, 633, 710, 729, 777, 876
HpyCH4V TGCA 7 cut(s) 4, 509, 627, 787, 907, 1235, 1303
HpyF10VI GCNNNNNNNGC 4 cut(s) 259, 814, 966, 1158
HpyF3I CTNAG 4 cut(s) 163, 317, 441, 809
HpySE526I ACGT 7 cut(s) 188, 357, 633, 710, 729, 777, 876
Hsp92I GRCGYC 1 cut(s) 248
Hsp92II CATG 4 cut(s) 8, 47, 139, 1035
HspAI GCGC 1 cut(s) 590
KflI GGGWCCC 1 cut(s) 367
Kpn2I TCCGGA 2 cut(s) 520, 540
KroI GCCGGC 1 cut(s) 613
KroNI GCCGGC 1 cut(s) 615
Ksp22I TGATCA 1 cut(s) 481
Kzo9I GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
LmnI GCTCC 7 cut(s) 342, 610, 805, 814, 847, 884, 1041
Lsp1109I GCAGC 3 cut(s) 460, 1115, 1148
LweI GCATC 3 cut(s) 104, 774, 985
MaeII ACGT 7 cut(s) 188, 357, 633, 710, 729, 777, 876
MaeIII GTNAC 2 cut(s) 32, 1139
MalI GATC 9 cut(s) 140, 203, 272, 483, 519, 530, 560, 576, 1071
MbiI CCGCTC 1 cut(s) 772
MboI GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
MboII GAAGA 6 cut(s) 584, 718, 923, 1073, 1094, 1097
MfeI CAATTG 1 cut(s) 902
MflI RGATCY 1 cut(s) 574
MhlI GDGCHC 2 cut(s) 147, 314
MluCI AATT 5 cut(s) 102, 158, 496, 902, 950
MmeI TCCRAC 4 cut(s) 263, 420, 450, 1147
Mph1103I ATGCAT 2 cut(s) 6, 789
MroI TCCGGA 2 cut(s) 520, 540
MroNI GCCGGC 1 cut(s) 613
MspI CCGG 6 cut(s) 254, 263, 521, 541, 614, 760
MspR9I CCNGG 5 cut(s) 244, 255, 647, 761, 1133
MunI CAATTG 1 cut(s) 902
Mva1269I GAATGC 1 cut(s) 787
MvaI CCWGG 3 cut(s) 244, 647, 1133
MvnI CGCG 2 cut(s) 536, 1074
MwoI GCNNNNNNNGC 4 cut(s) 259, 814, 966, 1158
NaeI GCCGGC 1 cut(s) 615
NciI CCSGG 2 cut(s) 255, 761
NdeI CATATG 1 cut(s) 1169
NdeII GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
NgoMIV GCCGGC 1 cut(s) 613
NlaIII CATG 4 cut(s) 8, 47, 139, 1035
NlaIV GGNNCC 7 cut(s) 368, 369, 612, 758, 843, 1121, 1276
NmuCI GTSAC 1 cut(s) 32
NruI TCGCGA 1 cut(s) 1074
NsiI ATGCAT 2 cut(s) 6, 789
NspI RCATGY 2 cut(s) 8, 1035
PaeR7I CTCGAG 1 cut(s) 299
PceI AGGCCT 1 cut(s) 297
PciI ACATGT 1 cut(s) 1031
PcsI WCGNNNNNNNCGW 2 cut(s) 774, 921
PctI GAATGC 1 cut(s) 787
PdiI GCCGGC 1 cut(s) 615
PfeI GAWTC 5 cut(s) 414, 460, 895, 938, 1112
Pfl23II CGTACG 1 cut(s) 711
PflFI GACNNNGTC 1 cut(s) 190
PflMI CCANNNNNTGG 1 cut(s) 189
PkrI GCNGC 7 cut(s) 21, 252, 447, 450, 971, 1130, 1163
PmaCI CACGTG 1 cut(s) 730
PmlI CACGTG 1 cut(s) 730
Ppu21I YACGTR 1 cut(s) 730
PpuMI RGGWCCY 1 cut(s) 367
PscI ACATGT 1 cut(s) 1031
PshAI GACNNNNGTC 1 cut(s) 372
Psp5II RGGWCCY 1 cut(s) 367
Psp6I CCWGG 3 cut(s) 242, 645, 1131
PspCI CACGTG 1 cut(s) 730
PspGI CCWGG 3 cut(s) 242, 645, 1131
PspLI CGTACG 1 cut(s) 711
PspN4I GGNNCC 7 cut(s) 368, 369, 612, 758, 843, 1121, 1276
PspPI GGNCC 4 cut(s) 367, 621, 643, 757
PspPPI RGGWCCY 1 cut(s) 367
PspXI VCTCGAGB 1 cut(s) 299
PsuI RGATCY 1 cut(s) 574
PsyI GACNNNGTC 1 cut(s) 190
RruI TCGCGA 1 cut(s) 1074
RsaI GTAC 7 cut(s) 680, 702, 713, 833, 875, 1186, 1204
RsaNI GTAC 7 cut(s) 679, 701, 712, 832, 874, 1185, 1203
SatI GCNGC 7 cut(s) 20, 251, 446, 449, 970, 1129, 1162
Sau3AI GATC 9 cut(s) 138, 201, 270, 481, 517, 528, 558, 574, 1069
Sau96I GGNCC 4 cut(s) 367, 621, 643, 757
ScrFI CCNGG 5 cut(s) 244, 255, 647, 761, 1133
SduI GDGCHC 2 cut(s) 147, 314
SfaNI GCATC 3 cut(s) 104, 774, 985
Sfr274I CTCGAG 1 cut(s) 299
SinI GGWCC 2 cut(s) 367, 757
SlaI CTCGAG 1 cut(s) 299
SmlI CTYRAG 3 cut(s) 299, 307, 821
SmoI CTYRAG 3 cut(s) 299, 307, 821
Sse9I AATT 5 cut(s) 102, 158, 496, 902, 950
SseBI AGGCCT 1 cut(s) 297
StuI AGGCCT 1 cut(s) 297
StyD4I CCNGG 5 cut(s) 242, 253, 645, 759, 1131
TaaI ACNGT 2 cut(s) 1189, 1247
TaiI ACGT 7 cut(s) 191, 360, 636, 713, 732, 780, 879
TasI AATT 5 cut(s) 102, 158, 496, 902, 950
TatI WGTACW 2 cut(s) 678, 1184
TauI GCSGC 4 cut(s) 22, 253, 448, 972
TfiI GAWTC 5 cut(s) 414, 460, 895, 938, 1112
TscAI CASTG 2 cut(s) 171, 1252
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 3 cut(s) 448, 1128, 1161
Tsp45I GTSAC 1 cut(s) 32
TspGWI ACGGA 3 cut(s) 126, 718, 834
TspRI CASTG 2 cut(s) 171, 1252
Tth111I GACNNNGTC 1 cut(s) 190
Van91I CCANNNNNTGG 1 cut(s) 189
VpaK11BI GGWCC 2 cut(s) 367, 757
XapI RAATTY 1 cut(s) 158
XceI RCATGY 2 cut(s) 8, 1035
XhoI CTCGAG 1 cut(s) 299
Zsp2I ATGCAT 2 cut(s) 6, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.