pycom17g06750

Alpha beta hydrolase domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0011381
Physical Location & Seq
Forward (+)
4890532 .. 4893050
2519 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g06750.4

Sequence Viewer

Length: 1143 bp
ATGGGGGCAGTGACGTCATCAATGGCGGCCAAGTTCGCGTTTTTCCCGCCGAGCCCGCCGTCGTACGGGGTGGAGAAGGAGGAGGATAGTGGGAAGCTGAAGATGACCGGGGTGGGGACGAGGGAGAACGTCGACGTCTTGAAGCTGAGGACCAAGAGAGGGAACGACATCGTGGCGGTGTACATAAGGAATCCGTCGGCGAAGCTTACTGTTCTGCACTCGCATGGGAACGCGGCTGATCTGGGTCAGATGTACGAGTTGTTCAGTGAGCTGAGTCTTCACCTCCGAGTCAACTTGTTGGGGTATGATTATTCGGGGTACGGACAGTCCACTGGGAAGCCGAGTGAGCAAAACACTTATGCAGACATAGAAGCTGCATATAGATGCCTTGTGGAGAGGTATGGTGCGAAGGAGGAGGATATTATTTTATATGGGCAATCAGTTGGTAGTGGGCCCACTCTCGATTTAGCAACCCGGTTACCAAGATTGAGGGCAGTGGTTCTTCACAGTCCGATCATGTCTGGTCTTCGTGTCATGTATCCAGTGAAGCGAACGTATTGGTTTGACATTTATAAGAACATTGACAAAATACCCTTGGTCAGTTGCCCTGTTTTGGTGATTCATGGGACGGCTGATGATGTTGTGGATTGGTCCCATGGCAAGCAGCTTTTGGATAATTGTAAGGAGAAGTATGAGCCATTATGGATAAAGGGAGGTAATCATTGTGACTTGGAGCTCTACCCACAGTACATAAAGCATGTCAAAAAGTTTGTATCGACCATTGAGAAATATCCGCATCTGAGGAATAAATCAGGGCCGGTTACAGGTCAACCAGAAAATCCACGGAAAAGCACTGACATCAGGGAGAAATCTTGTTCCAGCACAGATCACAAAGAGAATTGTAGACCAAGTACCGATCATATAGAAAACCCCAGGTTAAGTACAGATCATAGAGAGAAGTCAAGGGCCAGCACTGATAAGAGAGAGAGAACAAGAAAGAGTATGGACCAACCTGAAAAAGCAAGTAATAGCGTGGATCAGCCAGAGAGAGCAAGAAATAGCATTGACCGCTTCGGAGAGATGTTCAGATCAATTGGATTGTGCAATATTGACTGTTTTAAGCCCACAGCTACCAGTGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Hydrolase_4 Peptidase_S9

Protein Analysis

381

Amino Acids

42.79

Weight (kDa)

8.82

Isoelectric Point (pI)

43.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011381)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30380 AT3G30380
fragaria_vesca FvH4_6g46130 FvH4_6g46130
malus_domestica MD09G1076700.v1.1 MD17G1067200.v1.1
prunus_persica Prupe.3G247400_v2.0.a1 Prupe.3G247400_v2.0.a1
pyrus_communis pycom09g00390 pycom17g06750
rosa_chinensis RchiOBHm_Chr2g0164581
rosa_laevigata RLG00000021467
rosa_multiflora Rmu_co8187214.1_g000001
rosa_roxburghii Rroxscaffold_2G00086470
rosa_rugosa Rorug02G0509300
rosa_samantha Rh2AG576900 Rh2BG588000 Rh2CG558800 Rh2DG598600
rosa_wichuraiana Rw2G047900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 573
AatII GACGTC 2 cut(s) 17, 138
AccI GTMKAC 2 cut(s) 132, 904
AccII CGCG 2 cut(s) 38, 233
AciI CCGC 7 cut(s) 26, 47, 56, 176, 233, 794, 1069
AclWI GGATC 1 cut(s) 1044
AcoI YGGCCR 1 cut(s) 27
AcuI CTGAAG 1 cut(s) 119
AcyI GRCGYC 2 cut(s) 14, 135
AfaI GTAC 7 cut(s) 65, 182, 254, 320, 749, 913, 943
AfiI CCNNNNNNNGG 5 cut(s) 65, 114, 159, 613, 824
AgsI TTSAA 1 cut(s) 142
AjnI CCWGG 1 cut(s) 932
AluBI AGCT 8 cut(s) 97, 145, 205, 271, 374, 667, 736, 1130
AluI AGCT 8 cut(s) 97, 145, 205, 271, 374, 667, 736, 1130
Alw21I GWGCWC 1 cut(s) 738
AlwI GGATC 1 cut(s) 1044
AoxI GGCC 4 cut(s) 27, 452, 815, 966
ApaI GGGCCC 1 cut(s) 456
ApeKI GCWGC 2 cut(s) 374, 664
AspS9I GGNCC 7 cut(s) 150, 452, 453, 651, 815, 966, 1006
AsuC2I CCSGG 2 cut(s) 109, 475
AsuHPI GGTGA 2 cut(s) 272, 628
AvaII GGWCC 3 cut(s) 150, 651, 1006
BaeGI GKGCMC 1 cut(s) 456
BanII GRGCYC 3 cut(s) 56, 456, 738
BbsI GAAGAC 2 cut(s) 269, 518
Bbv12I GWGCWC 1 cut(s) 738
BbvCI CCTCAGC 1 cut(s) 146
BbvI GCAGC 2 cut(s) 361, 676
BceAI ACGGC 2 cut(s) 43, 645
BciT130I CCWGG 1 cut(s) 934
BciVI GTATCC 1 cut(s) 549
BcnI CCSGG 2 cut(s) 109, 475
BfuI GTATCC 1 cut(s) 549
BisI GCNGC 4 cut(s) 27, 234, 375, 665
BlsI GCNGC 4 cut(s) 28, 235, 376, 666
Bme1390I CCNGG 3 cut(s) 109, 475, 934
Bme18I GGWCC 3 cut(s) 150, 651, 1006
BmgT120I GGNCC 7 cut(s) 150, 452, 453, 651, 815, 966, 1006
BmiI GGNNCC 2 cut(s) 454, 653
BmrFI CCNGG 3 cut(s) 109, 475, 934
BmrI ACTGGG 1 cut(s) 342
BmsI GCATC 2 cut(s) 374, 805
BmuI ACTGGG 1 cut(s) 342
BpiI GAAGAC 2 cut(s) 269, 518
Bpu10I CCTNAGC 1 cut(s) 146
BpuMI CCSGG 2 cut(s) 109, 475
BsaHI GRCGYC 2 cut(s) 14, 135
BsaJI CCNNGG 5 cut(s) 108, 594, 655, 842, 932
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 114, 159, 613, 824
Bse118I RCCGGY 1 cut(s) 817
Bse1I ACTGG 3 cut(s) 337, 542, 1134
BseBI CCWGG 1 cut(s) 934
BseDI CCNNGG 5 cut(s) 108, 594, 655, 842, 932
BseLI CCNNNNNNNGG 5 cut(s) 65, 114, 159, 613, 824
BseMII CTCAG 3 cut(s) 137, 263, 791
BseNI ACTGG 3 cut(s) 337, 542, 1134
BseRI GAGGAG 2 cut(s) 95, 428
BseSI GKGCMC 1 cut(s) 456
BseXI GCAGC 2 cut(s) 361, 676
BsgI GTGCAG 1 cut(s) 200
Bsh1236I CGCG 2 cut(s) 38, 233
BshFI GGCC 4 cut(s) 29, 454, 817, 968
BsiHKAI GWGCWC 1 cut(s) 738
BsiSI CCGG 3 cut(s) 108, 475, 818
BsiWI CGTACG 1 cut(s) 63
BslFI GGGAC 3 cut(s) 130, 637, 640
BslI CCNNNNNNNGG 5 cut(s) 65, 114, 159, 613, 824
BsmFI GGGAC 3 cut(s) 130, 637, 640
BsnI GGCC 4 cut(s) 29, 454, 817, 968
Bsp120I GGGCCC 1 cut(s) 452
Bsp1286I GDGCHC 3 cut(s) 56, 456, 738
Bsp1407I TGTACA 1 cut(s) 180
Bsp143I GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
Bsp19I CCATGG 1 cut(s) 655
BspACI CCGC 7 cut(s) 26, 47, 56, 176, 233, 794, 1069
BspANI GGCC 4 cut(s) 29, 454, 817, 968
BspCNI CTCAG 3 cut(s) 138, 264, 792
BspFNI CGCG 2 cut(s) 38, 233
BspLI GGNNCC 2 cut(s) 454, 653
BspPI GGATC 1 cut(s) 1044
BsrFI RCCGGY 1 cut(s) 817
BsrGI TGTACA 1 cut(s) 180
BsrI ACTGG 3 cut(s) 337, 542, 1134
BssAI RCCGGY 1 cut(s) 817
BssECI CCNNGG 5 cut(s) 108, 594, 655, 842, 932
BssMI GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
BssNI GRCGYC 2 cut(s) 14, 135
BssT1I CCWWGG 2 cut(s) 594, 655
Bst2UI CCWGG 1 cut(s) 934
Bst4CI ACNGT 5 cut(s) 211, 327, 509, 747, 1115
BstACI GRCGYC 2 cut(s) 14, 135
BstAUI TGTACA 1 cut(s) 180
BstC8I GCNNGC 3 cut(s) 56, 662, 970
BstDEI CTNAG 3 cut(s) 146, 272, 800
BstDSI CCRYGG 2 cut(s) 655, 842
BstEII GGTNACC 1 cut(s) 477
BstFNI CGCG 2 cut(s) 38, 233
BstKTI GATC 7 cut(s) 241, 516, 889, 919, 949, 1039, 1091
BstMBI GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
BstMWI GCNNNNNNNGC 5 cut(s) 35, 55, 346, 1068, 1136
BstNI CCWGG 1 cut(s) 934
BstNSI RCATGY 1 cut(s) 761
BstPI GGTNACC 1 cut(s) 477
BstSCI CCNGG 3 cut(s) 107, 473, 932
BstSLI GKGCMC 1 cut(s) 456
BstUI CGCG 2 cut(s) 38, 233
BstV1I GCAGC 2 cut(s) 361, 676
BstV2I GAAGAC 2 cut(s) 269, 518
BsuI GTATCC 1 cut(s) 549
BsuRI GGCC 4 cut(s) 29, 454, 817, 968
BtgI CCRYGG 2 cut(s) 655, 842
BtsI GCAGTG 2 cut(s) 15, 501
BtsIMutI CAGTG 8 cut(s) 15, 271, 330, 501, 549, 852, 972, 1141
Cac8I GCNNGC 3 cut(s) 56, 662, 970
Cfr10I RCCGGY 1 cut(s) 817
Cfr13I GGNCC 7 cut(s) 150, 452, 453, 651, 815, 966, 1006
Csp6I GTAC 7 cut(s) 64, 181, 253, 319, 748, 912, 942
CviAII CATG 6 cut(s) 224, 517, 535, 623, 656, 758
CviQI GTAC 7 cut(s) 64, 181, 253, 319, 748, 912, 942
DdeI CTNAG 3 cut(s) 146, 272, 800
DpnI GATC 7 cut(s) 240, 515, 888, 918, 948, 1038, 1090
DpnII GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
EaeI YGGCCR 1 cut(s) 27
Ecl136II GAGCTC 1 cut(s) 736
Eco130I CCWWGG 2 cut(s) 594, 655
Eco24I GRGCYC 3 cut(s) 56, 456, 738
Eco47I GGWCC 3 cut(s) 150, 651, 1006
Eco53kI GAGCTC 1 cut(s) 736
Eco57I CTGAAG 1 cut(s) 119
Eco91I GGTNACC 1 cut(s) 477
EcoICRI GAGCTC 1 cut(s) 736
EcoO65I GGTNACC 1 cut(s) 477
EcoRII CCWGG 1 cut(s) 932
EcoT14I CCWWGG 2 cut(s) 594, 655
EcoT38I GRGCYC 3 cut(s) 56, 456, 738
ErhI CCWWGG 2 cut(s) 594, 655
FaeI CATG 6 cut(s) 227, 520, 538, 626, 659, 761
FaqI GGGAC 3 cut(s) 130, 637, 640
FatI CATG 6 cut(s) 223, 516, 534, 622, 655, 757
FauI CCCGC 2 cut(s) 54, 63
FblI GTMKAC 2 cut(s) 132, 904
Fnu4HI GCNGC 4 cut(s) 27, 234, 375, 665
FriOI GRGCYC 3 cut(s) 56, 456, 738
Fsp4HI GCNGC 4 cut(s) 27, 234, 375, 665
GluI GCNGC 4 cut(s) 27, 234, 375, 665
HaeIII GGCC 4 cut(s) 29, 454, 817, 968
HapII CCGG 3 cut(s) 108, 475, 818
Hin1I GRCGYC 2 cut(s) 14, 135
Hin1II CATG 6 cut(s) 227, 520, 538, 626, 659, 761
HincII GTYRAC 3 cut(s) 133, 292, 830
HindII GTYRAC 3 cut(s) 133, 292, 830
HindIII AAGCTT 1 cut(s) 203
HinfI GANTC 4 cut(s) 190, 274, 288, 619
HpaII CCGG 3 cut(s) 108, 475, 818
HphI GGTGA 2 cut(s) 272, 628
Hpy166II GTNNAC 6 cut(s) 133, 181, 292, 330, 830, 905
Hpy188I TCNGA 6 cut(s) 249, 287, 513, 801, 1076, 1088
Hpy188III TCNNGA 2 cut(s) 139, 461
Hpy8I GTNNAC 6 cut(s) 133, 181, 292, 330, 830, 905
Hpy99I CGWCG 4 cut(s) 64, 134, 137, 199
HpyAV CCTTC 2 cut(s) 70, 403
HpyCH4III ACNGT 5 cut(s) 211, 327, 509, 747, 1115
HpyCH4IV ACGT 4 cut(s) 14, 129, 135, 554
HpyCH4V TGCA 4 cut(s) 217, 362, 377, 1104
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 55, 346, 1068, 1136
HpyF3I CTNAG 3 cut(s) 146, 272, 800
HpySE526I ACGT 4 cut(s) 14, 129, 135, 554
Hsp92I GRCGYC 2 cut(s) 14, 135
Hsp92II CATG 6 cut(s) 227, 520, 538, 626, 659, 761
Kzo9I GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
LmnI GCTCC 1 cut(s) 733
Lsp1109I GCAGC 2 cut(s) 361, 676
LweI GCATC 2 cut(s) 374, 805
MaeII ACGT 4 cut(s) 14, 129, 135, 554
MaeIII GTNAC 4 cut(s) 10, 477, 725, 820
MalI GATC 7 cut(s) 240, 515, 888, 918, 948, 1038, 1090
MboI GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
MboII GAAGA 4 cut(s) 112, 269, 494, 518
MfeI CAATTG 1 cut(s) 1092
MhlI GDGCHC 3 cut(s) 56, 456, 738
MluCI AATT 3 cut(s) 676, 898, 1092
MlyI GAGTC 2 cut(s) 283, 297
MseI TTAA 2 cut(s) 938, 1119
MslI CAYNNNNRTG 2 cut(s) 222, 382
MspI CCGG 3 cut(s) 108, 475, 818
MspR9I CCNGG 3 cut(s) 109, 475, 934
MunI CAATTG 1 cut(s) 1092
MvaI CCWGG 1 cut(s) 934
MvnI CGCG 2 cut(s) 38, 233
MwoI GCNNNNNNNGC 5 cut(s) 35, 55, 346, 1068, 1136
NciI CCSGG 2 cut(s) 109, 475
NcoI CCATGG 1 cut(s) 655
NdeII GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
NlaIII CATG 6 cut(s) 227, 520, 538, 626, 659, 761
NlaIV GGNNCC 2 cut(s) 454, 653
NmeAIII GCCGAG 2 cut(s) 75, 366
NmuCI GTSAC 2 cut(s) 10, 725
NspI RCATGY 1 cut(s) 761
PfeI GAWTC 2 cut(s) 190, 619
Pfl23II CGTACG 1 cut(s) 63
PkrI GCNGC 4 cut(s) 28, 235, 376, 666
PleI GAGTC 2 cut(s) 282, 296
PpsI GAGTC 2 cut(s) 282, 296
PsiI TTATAA 1 cut(s) 573
Psp124BI GAGCTC 1 cut(s) 738
Psp6I CCWGG 1 cut(s) 932
PspEI GGTNACC 1 cut(s) 477
PspGI CCWGG 1 cut(s) 932
PspLI CGTACG 1 cut(s) 63
PspN4I GGNNCC 2 cut(s) 454, 653
PspOMI GGGCCC 1 cut(s) 452
PspPI GGNCC 7 cut(s) 150, 452, 453, 651, 815, 966, 1006
PsrI GAACNNNNNNTAC 2 cut(s) 245, 277
RsaI GTAC 7 cut(s) 65, 182, 254, 320, 749, 913, 943
RsaNI GTAC 7 cut(s) 64, 181, 253, 319, 748, 912, 942
RseI CAYNNNNRTG 2 cut(s) 222, 382
SacI GAGCTC 1 cut(s) 738
SalI GTCGAC 1 cut(s) 131
SaqAI TTAA 2 cut(s) 938, 1119
SatI GCNGC 4 cut(s) 27, 234, 375, 665
Sau3AI GATC 7 cut(s) 238, 513, 886, 916, 946, 1036, 1088
Sau96I GGNCC 7 cut(s) 150, 452, 453, 651, 815, 966, 1006
SchI GAGTC 2 cut(s) 283, 297
ScrFI CCNGG 3 cut(s) 109, 475, 934
SduI GDGCHC 3 cut(s) 56, 456, 738
SfaNI GCATC 2 cut(s) 374, 805
SgrDI CGTCGACG 1 cut(s) 131
SinI GGWCC 3 cut(s) 150, 651, 1006
SmiMI CAYNNNNRTG 2 cut(s) 222, 382
Sse9I AATT 3 cut(s) 676, 898, 1092
SsiI CCGC 7 cut(s) 26, 47, 56, 176, 233, 794, 1069
SspI AATATT 1 cut(s) 1108
SstI GAGCTC 1 cut(s) 738
StyD4I CCNGG 3 cut(s) 107, 473, 932
StyI CCWWGG 2 cut(s) 594, 655
TaaI ACNGT 5 cut(s) 211, 327, 509, 747, 1115
TaiI ACGT 4 cut(s) 17, 132, 138, 557
TaqI TCGA 3 cut(s) 132, 462, 776
TasI AATT 3 cut(s) 676, 898, 1092
TatI WGTACW 3 cut(s) 180, 747, 941
TauI GCSGC 2 cut(s) 29, 236
TfiI GAWTC 2 cut(s) 190, 619
Tru1I TTAA 2 cut(s) 938, 1119
Tru9I TTAA 2 cut(s) 938, 1119
TscAI CASTG 8 cut(s) 15, 271, 337, 501, 549, 859, 979, 1141
TseFI GTSAC 2 cut(s) 10, 725
TseI GCWGC 2 cut(s) 374, 664
Tsp45I GTSAC 2 cut(s) 10, 725
TspDTI ATGAA 1 cut(s) 611
TspGWI ACGGA 3 cut(s) 183, 336, 859
TspRI CASTG 8 cut(s) 15, 271, 337, 501, 549, 859, 979, 1141
VpaK11BI GGWCC 3 cut(s) 150, 651, 1006
XceI RCATGY 1 cut(s) 761
XmiI GTMKAC 2 cut(s) 132, 904
ZraI GACGTC 2 cut(s) 15, 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.