External alternative NAD(P)H-ubiquinone oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20800 |
| fragaria_vesca | FvH4_6g44591 |
| malus_domestica | MD02G1063600.v1.1 MD14G1065500.v1.1 MD14G1065600.v1.1 MD17G1084300.v1.1 |
| prunus_persica | Prupe.3G231300_v2.0.a1 |
| pyrus_communis | pycom17g08140 |
| rosa_chinensis | RchiOBHm_Chr2g0161871 |
| rosa_laevigata | RLG00000021304 |
| rosa_multiflora | Rmu_sc0001993.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00088490 |
| rosa_samantha | Rh2AG558600 Rh2BG572100 Rh2CG542500 Rh2DG582000 |
| rosa_wichuraiana | Rw2G046250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1142 |
| AbsI | CCTCGAGG | 1 cut(s) | 31 |
| AccB1I | GGYRCC | 1 cut(s) | 1331 |
| AciI | CCGC | 3 cut(s) | 699, 936, 1420 |
| AclI | AACGTT | 2 cut(s) | 49, 1253 |
| AclWI | GGATC | 3 cut(s) | 410, 595, 608 |
| AcoI | YGGCCR | 1 cut(s) | 1516 |
| AcsI | RAATTY | 4 cut(s) | 229, 386, 959, 1115 |
| AcuI | CTGAAG | 4 cut(s) | 756, 879, 1404, 1417 |
| AcyI | GRCGYC | 1 cut(s) | 1414 |
| AdeI | CACNNNGTG | 1 cut(s) | 1530 |
| AfaI | GTAC | 3 cut(s) | 192, 1099, 1379 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1469 |
| AflIII | ACRYGT | 2 cut(s) | 311, 828 |
| AgeI | ACCGGT | 1 cut(s) | 200 |
| AjnI | CCWGG | 3 cut(s) | 547, 1311, 1495 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 263, 295 |
| AleI | CACNNNNGTG | 1 cut(s) | 1562 |
| AluBI | AGCT | 7 cut(s) | 479, 707, 730, 1265, 1319, 1487, 1543 |
| AluI | AGCT | 7 cut(s) | 479, 707, 730, 1265, 1319, 1487, 1543 |
| Alw26I | GTCTC | 5 cut(s) | 17, 110, 870, 942, 1513 |
| AlwI | GGATC | 3 cut(s) | 410, 595, 608 |
| Ama87I | CYCGRG | 1 cut(s) | 31 |
| AoxI | GGCC | 3 cut(s) | 97, 1007, 1516 |
| ApeKI | GCWGC | 5 cut(s) | 333, 722, 1262, 1319, 1484 |
| ApoI | RAATTY | 4 cut(s) | 229, 386, 959, 1115 |
| AsiGI | ACCGGT | 1 cut(s) | 200 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 348, 847, 869, 961 |
| AspLEI | GCGC | 1 cut(s) | 1557 |
| AspS9I | GGNCC | 4 cut(s) | 701, 1007, 1135, 1388 |
| AsuHPI | GGTGA | 1 cut(s) | 258 |
| AsuII | TTCGAA | 1 cut(s) | 627 |
| AvaI | CYCGRG | 1 cut(s) | 31 |
| AvaII | GGWCC | 3 cut(s) | 701, 1135, 1388 |
| BalI | TGGCCA | 1 cut(s) | 1518 |
| BamHI | GGATCC | 1 cut(s) | 600 |
| BanI | GGYRCC | 1 cut(s) | 1331 |
| BbsI | GAAGAC | 1 cut(s) | 632 |
| BbvI | GCAGC | 5 cut(s) | 345, 709, 1274, 1306, 1496 |
| BccI | CCATC | 2 cut(s) | 51, 976 |
| BciT130I | CCWGG | 3 cut(s) | 549, 1313, 1497 |
| BciVI | GTATCC | 2 cut(s) | 943, 1161 |
| BcoDI | GTCTC | 5 cut(s) | 17, 110, 870, 942, 1513 |
| BfaI | CTAG | 5 cut(s) | 101, 194, 645, 1109, 1544 |
| BfmI | CTRYAG | 2 cut(s) | 723, 1482 |
| BfuI | GTATCC | 2 cut(s) | 943, 1161 |
| BisI | GCNGC | 5 cut(s) | 334, 723, 1263, 1320, 1485 |
| BlsI | GCNGC | 5 cut(s) | 335, 724, 1264, 1321, 1486 |
| BmcAI | AGTACT | 1 cut(s) | 192 |
| Bme1390I | CCNGG | 3 cut(s) | 549, 1313, 1497 |
| Bme18I | GGWCC | 3 cut(s) | 701, 1135, 1388 |
| BmeT110I | CYCGRG | 1 cut(s) | 31 |
| BmgT120I | GGNCC | 4 cut(s) | 701, 1007, 1135, 1388 |
| BmiI | GGNNCC | 5 cut(s) | 199, 523, 602, 1333, 1390 |
| BmrFI | CCNGG | 3 cut(s) | 549, 1313, 1497 |
| BmrI | ACTGGG | 1 cut(s) | 1475 |
| BmuI | ACTGGG | 1 cut(s) | 1475 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1614 |
| BpiI | GAAGAC | 1 cut(s) | 632 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 14, 46 |
| BpmI | CTGGAG | 2 cut(s) | 231, 1597 |
| Bpu10I | CCTNAGC | 1 cut(s) | 153 |
| Bpu14I | TTCGAA | 1 cut(s) | 627 |
| BpuEI | CTTGAG | 1 cut(s) | 1379 |
| Bsa29I | ATCGAT | 2 cut(s) | 414, 1242 |
| BsaAI | YACGTR | 1 cut(s) | 787 |
| BsaHI | GRCGYC | 1 cut(s) | 1414 |
| BsaI | GGTCTC | 2 cut(s) | 110, 1513 |
| BsaJI | CCNNGG | 1 cut(s) | 1311 |
| BsaWI | WCCGGW | 1 cut(s) | 200 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1491, 1521 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1469 |
| Bse118I | RCCGGY | 1 cut(s) | 200 |
| Bse1I | ACTGG | 4 cut(s) | 125, 1003, 1470, 1614 |
| Bse3DI | GCAATG | 1 cut(s) | 522 |
| BseBI | CCWGG | 3 cut(s) | 549, 1313, 1497 |
| BseCI | ATCGAT | 2 cut(s) | 414, 1242 |
| BseDI | CCNNGG | 1 cut(s) | 1311 |
| BseGI | GGATG | 4 cut(s) | 987, 1057, 1411, 1458 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1469 |
| BseMI | GCAATG | 1 cut(s) | 522 |
| BseMII | CTCAG | 6 cut(s) | 167, 471, 668, 1008, 1151, 1541 |
| BseNI | ACTGG | 4 cut(s) | 125, 1003, 1470, 1614 |
| BseRI | GAGGAG | 2 cut(s) | 250, 1485 |
| BseXI | GCAGC | 5 cut(s) | 345, 709, 1274, 1306, 1496 |
| BshFI | GGCC | 3 cut(s) | 99, 1009, 1518 |
| BshNI | GGYRCC | 1 cut(s) | 1331 |
| BshTI | ACCGGT | 1 cut(s) | 200 |
| BshVI | ATCGAT | 2 cut(s) | 414, 1242 |
| BsiHKCI | CYCGRG | 1 cut(s) | 31 |
| BsiSI | CCGG | 2 cut(s) | 201, 1301 |
| BslFI | GGGAC | 3 cut(s) | 21, 1374, 1622 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1469 |
| BsmAI | GTCTC | 5 cut(s) | 17, 110, 870, 942, 1513 |
| BsmBI | CGTCTC | 1 cut(s) | 870 |
| BsmFI | GGGAC | 3 cut(s) | 21, 1374, 1622 |
| BsnI | GGCC | 3 cut(s) | 99, 1009, 1518 |
| Bso31I | GGTCTC | 2 cut(s) | 110, 1513 |
| BsoBI | CYCGRG | 1 cut(s) | 31 |
| Bsp119I | TTCGAA | 1 cut(s) | 627 |
| Bsp143I | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| BspACI | CCGC | 3 cut(s) | 699, 936, 1420 |
| BspANI | GGCC | 3 cut(s) | 99, 1009, 1518 |
| BspCNI | CTCAG | 6 cut(s) | 166, 472, 669, 1009, 1152, 1540 |
| BspDI | ATCGAT | 2 cut(s) | 414, 1242 |
| BspHI | TCATGA | 2 cut(s) | 112, 733 |
| BspLI | GGNNCC | 5 cut(s) | 199, 523, 602, 1333, 1390 |
| BspMAI | CTGCAG | 2 cut(s) | 727, 1486 |
| BspPI | GGATC | 3 cut(s) | 410, 595, 608 |
| BspQI | GCTCTTC | 1 cut(s) | 1169 |
| BspT104I | TTCGAA | 1 cut(s) | 627 |
| BspT107I | GGYRCC | 1 cut(s) | 1331 |
| BspTNI | GGTCTC | 2 cut(s) | 110, 1513 |
| BsrDI | GCAATG | 1 cut(s) | 522 |
| BsrFI | RCCGGY | 1 cut(s) | 200 |
| BsrI | ACTGG | 4 cut(s) | 125, 1003, 1470, 1614 |
| BssAI | RCCGGY | 1 cut(s) | 200 |
| BssECI | CCNNGG | 1 cut(s) | 1311 |
| BssMI | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| BssNI | GRCGYC | 1 cut(s) | 1414 |
| Bst2UI | CCWGG | 3 cut(s) | 549, 1313, 1497 |
| Bst4CI | ACNGT | 8 cut(s) | 85, 136, 322, 458, 613, 623, 799, 1349 |
| Bst6I | CTCTTC | 2 cut(s) | 654, 1169 |
| BstACI | GRCGYC | 1 cut(s) | 1414 |
| BstBAI | YACGTR | 1 cut(s) | 787 |
| BstBI | TTCGAA | 1 cut(s) | 627 |
| BstC8I | GCNNGC | 4 cut(s) | 331, 811, 1181, 1541 |
| BstDEI | CTNAG | 6 cut(s) | 153, 480, 677, 1017, 1160, 1527 |
| BstF5I | GGATG | 4 cut(s) | 987, 1057, 1411, 1458 |
| BstHHI | GCGC | 1 cut(s) | 1557 |
| BstKTI | GATC | 7 cut(s) | 418, 446, 603, 618, 804, 817, 1595 |
| BstMAI | GTCTC | 5 cut(s) | 17, 110, 870, 942, 1513 |
| BstMBI | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 149, 158, 521, 1316, 1340, 1540 |
| BstNI | CCWGG | 3 cut(s) | 549, 1313, 1497 |
| BstNSI | RCATGY | 2 cut(s) | 315, 832 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1614 |
| BstSCI | CCNGG | 3 cut(s) | 547, 1311, 1495 |
| BstSFI | CTRYAG | 2 cut(s) | 723, 1482 |
| BstSNI | TACGTA | 1 cut(s) | 787 |
| BstV1I | GCAGC | 5 cut(s) | 345, 709, 1274, 1306, 1496 |
| BstV2I | GAAGAC | 1 cut(s) | 632 |
| BstX2I | RGATCY | 1 cut(s) | 600 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1503 |
| BstYI | RGATCY | 1 cut(s) | 600 |
| Bsu15I | ATCGAT | 2 cut(s) | 414, 1242 |
| BsuI | GTATCC | 2 cut(s) | 943, 1161 |
| BsuRI | GGCC | 3 cut(s) | 99, 1009, 1518 |
| BsuTUI | ATCGAT | 2 cut(s) | 414, 1242 |
| BtsCI | GGATG | 4 cut(s) | 987, 1057, 1411, 1458 |
| BtsIMutI | CAGTG | 3 cut(s) | 81, 1463, 1535 |
| Cac8I | GCNNGC | 4 cut(s) | 331, 811, 1181, 1541 |
| CciI | TCATGA | 2 cut(s) | 112, 733 |
| CfoI | GCGC | 1 cut(s) | 1557 |
| Cfr10I | RCCGGY | 1 cut(s) | 200 |
| Cfr13I | GGNCC | 4 cut(s) | 701, 1007, 1135, 1388 |
| ClaI | ATCGAT | 2 cut(s) | 414, 1242 |
| CseI | GACGC | 2 cut(s) | 599, 1422 |
| Csp6I | GTAC | 3 cut(s) | 191, 1098, 1378 |
| CspAI | ACCGGT | 1 cut(s) | 200 |
| CviAII | CATG | 7 cut(s) | 113, 283, 312, 734, 829, 1129, 1141 |
| CviQI | GTAC | 3 cut(s) | 191, 1098, 1378 |
| DdeI | CTNAG | 6 cut(s) | 153, 480, 677, 1017, 1160, 1527 |
| DpnI | GATC | 7 cut(s) | 417, 445, 602, 617, 803, 816, 1594 |
| DpnII | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| DraI | TTTAAA | 1 cut(s) | 1258 |
| DraIII | CACNNNGTG | 1 cut(s) | 1530 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1142 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1142 |
| EaeI | YGGCCR | 1 cut(s) | 1516 |
| Eam1104I | CTCTTC | 2 cut(s) | 654, 1169 |
| EarI | CTCTTC | 2 cut(s) | 654, 1169 |
| Eco105I | TACGTA | 1 cut(s) | 787 |
| Eco147I | AGGCCT | 1 cut(s) | 99 |
| Eco31I | GGTCTC | 2 cut(s) | 110, 1513 |
| Eco47I | GGWCC | 3 cut(s) | 701, 1135, 1388 |
| Eco57I | CTGAAG | 4 cut(s) | 756, 879, 1404, 1417 |
| Eco88I | CYCGRG | 1 cut(s) | 31 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1135, 1388 |
| EcoRII | CCWGG | 3 cut(s) | 547, 1311, 1495 |
| Esp3I | CGTCTC | 1 cut(s) | 870 |
| FaeI | CATG | 7 cut(s) | 116, 286, 315, 737, 832, 1132, 1144 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1251, 1283 |
| FaqI | GGGAC | 3 cut(s) | 21, 1374, 1622 |
| FatI | CATG | 7 cut(s) | 112, 282, 311, 733, 828, 1128, 1140 |
| FauNDI | CATATG | 1 cut(s) | 1185 |
| Fnu4HI | GCNGC | 5 cut(s) | 334, 723, 1263, 1320, 1485 |
| FokI | GGATG | 4 cut(s) | 994, 1064, 1418, 1465 |
| Fsp4HI | GCNGC | 5 cut(s) | 334, 723, 1263, 1320, 1485 |
| FspBI | CTAG | 5 cut(s) | 101, 194, 645, 1109, 1544 |
| GlaI | GCGC | 1 cut(s) | 1556 |
| GluI | GCNGC | 5 cut(s) | 334, 723, 1263, 1320, 1485 |
| GsuI | CTGGAG | 2 cut(s) | 231, 1597 |
| HaeIII | GGCC | 3 cut(s) | 99, 1009, 1518 |
| HapII | CCGG | 2 cut(s) | 201, 1301 |
| HgaI | GACGC | 2 cut(s) | 599, 1422 |
| HhaI | GCGC | 1 cut(s) | 1557 |
| Hin1I | GRCGYC | 1 cut(s) | 1414 |
| Hin1II | CATG | 7 cut(s) | 116, 286, 315, 737, 832, 1132, 1144 |
| Hin6I | GCGC | 1 cut(s) | 1555 |
| HinP1I | GCGC | 1 cut(s) | 1555 |
| HinfI | GANTC | 6 cut(s) | 67, 146, 213, 411, 1280, 1610 |
| HpaII | CCGG | 2 cut(s) | 201, 1301 |
| HphI | GGTGA | 1 cut(s) | 258 |
| Hpy166II | GTNNAC | 1 cut(s) | 288 |
| Hpy188I | TCNGA | 5 cut(s) | 605, 678, 875, 1579, 1620 |
| Hpy188III | TCNNGA | 8 cut(s) | 113, 155, 223, 574, 734, 1049, 1109, 1121 |
| Hpy8I | GTNNAC | 1 cut(s) | 288 |
| HpyAV | CCTTC | 9 cut(s) | 175, 571, 780, 854, 1175, 1379, 1441, 1581, 1599 |
| HpyCH4III | ACNGT | 8 cut(s) | 85, 136, 322, 458, 613, 623, 799, 1349 |
| HpyCH4IV | ACGT | 3 cut(s) | 49, 786, 1253 |
| HpyCH4V | TGCA | 4 cut(s) | 515, 725, 1484, 1539 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 149, 158, 521, 1316, 1340, 1540 |
| HpyF3I | CTNAG | 6 cut(s) | 153, 480, 677, 1017, 1160, 1527 |
| HpySE526I | ACGT | 3 cut(s) | 49, 786, 1253 |
| Hsp92I | GRCGYC | 1 cut(s) | 1414 |
| Hsp92II | CATG | 7 cut(s) | 116, 286, 315, 737, 832, 1132, 1144 |
| HspAI | GCGC | 1 cut(s) | 1555 |
| Kzo9I | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| LguI | GCTCTTC | 1 cut(s) | 1169 |
| LmnI | GCTCC | 1 cut(s) | 521 |
| Lsp1109I | GCAGC | 5 cut(s) | 345, 709, 1274, 1306, 1496 |
| MaeI | CTAG | 5 cut(s) | 101, 194, 645, 1109, 1544 |
| MaeII | ACGT | 3 cut(s) | 49, 786, 1253 |
| MaeIII | GTNAC | 3 cut(s) | 79, 264, 307 |
| MalI | GATC | 7 cut(s) | 417, 445, 602, 617, 803, 816, 1594 |
| MboI | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| MfeI | CAATTG | 1 cut(s) | 1512 |
| MflI | RGATCY | 1 cut(s) | 600 |
| MlsI | TGGCCA | 1 cut(s) | 1518 |
| MluNI | TGGCCA | 1 cut(s) | 1518 |
| MlyI | GAGTC | 2 cut(s) | 222, 1604 |
| MmeI | TCCRAC | 4 cut(s) | 628, 1199, 1390, 1598 |
| Mox20I | TGGCCA | 1 cut(s) | 1518 |
| MroXI | GAANNNNTTC | 4 cut(s) | 348, 847, 869, 961 |
| MscI | TGGCCA | 1 cut(s) | 1518 |
| MseI | TTAA | 4 cut(s) | 540, 917, 1103, 1257 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1562 |
| Msp20I | TGGCCA | 1 cut(s) | 1518 |
| MspA1I | CMGCKG | 1 cut(s) | 707 |
| MspI | CCGG | 2 cut(s) | 201, 1301 |
| MspR9I | CCNGG | 3 cut(s) | 549, 1313, 1497 |
| MunI | CAATTG | 1 cut(s) | 1512 |
| MvaI | CCWGG | 3 cut(s) | 549, 1313, 1497 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 149, 158, 521, 1316, 1340, 1540 |
| NdeI | CATATG | 1 cut(s) | 1185 |
| NdeII | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| NlaIII | CATG | 7 cut(s) | 116, 286, 315, 737, 832, 1132, 1144 |
| NlaIV | GGNNCC | 5 cut(s) | 199, 523, 602, 1333, 1390 |
| NmuCI | GTSAC | 2 cut(s) | 79, 264 |
| NspI | RCATGY | 2 cut(s) | 315, 832 |
| NspV | TTCGAA | 1 cut(s) | 627 |
| OliI | CACNNNNGTG | 1 cut(s) | 1562 |
| PaeR7I | CTCGAG | 1 cut(s) | 31 |
| PagI | TCATGA | 2 cut(s) | 112, 733 |
| PceI | AGGCCT | 1 cut(s) | 99 |
| PciI | ACATGT | 2 cut(s) | 311, 828 |
| PciSI | GCTCTTC | 1 cut(s) | 1169 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 624, 810 |
| PdmI | GAANNNNTTC | 4 cut(s) | 348, 847, 869, 961 |
| PfeI | GAWTC | 4 cut(s) | 67, 146, 411, 1280 |
| PfoI | TCCNGGA | 1 cut(s) | 1495 |
| PinAI | ACCGGT | 1 cut(s) | 200 |
| PkrI | GCNGC | 5 cut(s) | 335, 724, 1264, 1321, 1486 |
| PleI | GAGTC | 2 cut(s) | 221, 1604 |
| PpsI | GAGTC | 2 cut(s) | 221, 1604 |
| Ppu21I | YACGTR | 1 cut(s) | 787 |
| PpuMI | RGGWCCY | 2 cut(s) | 1135, 1388 |
| PscI | ACATGT | 2 cut(s) | 311, 828 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1614 |
| Psp1406I | AACGTT | 2 cut(s) | 49, 1253 |
| Psp5II | RGGWCCY | 2 cut(s) | 1135, 1388 |
| Psp6I | CCWGG | 3 cut(s) | 547, 1311, 1495 |
| PspGI | CCWGG | 3 cut(s) | 547, 1311, 1495 |
| PspN4I | GGNNCC | 5 cut(s) | 199, 523, 602, 1333, 1390 |
| PspPI | GGNCC | 4 cut(s) | 701, 1007, 1135, 1388 |
| PspPPI | RGGWCCY | 2 cut(s) | 1135, 1388 |
| PspXI | VCTCGAGB | 1 cut(s) | 31 |
| PstI | CTGCAG | 2 cut(s) | 727, 1486 |
| PsuI | RGATCY | 1 cut(s) | 600 |
| PvuII | CAGCTG | 1 cut(s) | 707 |
| RsaI | GTAC | 3 cut(s) | 192, 1099, 1379 |
| RsaNI | GTAC | 3 cut(s) | 191, 1098, 1378 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1562 |
| SapI | GCTCTTC | 1 cut(s) | 1169 |
| SaqAI | TTAA | 4 cut(s) | 540, 917, 1103, 1257 |
| SatI | GCNGC | 5 cut(s) | 334, 723, 1263, 1320, 1485 |
| Sau3AI | GATC | 7 cut(s) | 415, 443, 600, 615, 801, 814, 1592 |
| Sau96I | GGNCC | 4 cut(s) | 701, 1007, 1135, 1388 |
| ScaI | AGTACT | 1 cut(s) | 192 |
| SchI | GAGTC | 2 cut(s) | 222, 1604 |
| ScrFI | CCNGG | 3 cut(s) | 549, 1313, 1497 |
| SfcI | CTRYAG | 2 cut(s) | 723, 1482 |
| Sfr274I | CTCGAG | 1 cut(s) | 31 |
| SfuI | TTCGAA | 1 cut(s) | 627 |
| SinI | GGWCC | 3 cut(s) | 701, 1135, 1388 |
| SlaI | CTCGAG | 1 cut(s) | 31 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1562 |
| SmlI | CTYRAG | 2 cut(s) | 31, 1394 |
| SmoI | CTYRAG | 2 cut(s) | 31, 1394 |
| SnaBI | TACGTA | 1 cut(s) | 787 |
| SseBI | AGGCCT | 1 cut(s) | 99 |
| SsiI | CCGC | 3 cut(s) | 699, 936, 1420 |
| SspI | AATATT | 1 cut(s) | 1195 |
| SspMI | CTAG | 5 cut(s) | 101, 194, 645, 1109, 1544 |
| StuI | AGGCCT | 1 cut(s) | 99 |
| StyD4I | CCNGG | 3 cut(s) | 547, 1311, 1495 |
| TaaI | ACNGT | 8 cut(s) | 85, 136, 322, 458, 613, 623, 799, 1349 |
| TaiI | ACGT | 3 cut(s) | 52, 789, 1256 |
| TaqI | TCGA | 9 cut(s) | 32, 409, 414, 442, 618, 627, 804, 1064, 1242 |
| TatI | WGTACW | 1 cut(s) | 190 |
| TfiI | GAWTC | 4 cut(s) | 67, 146, 411, 1280 |
| Tru1I | TTAA | 4 cut(s) | 540, 917, 1103, 1257 |
| Tru9I | TTAA | 4 cut(s) | 540, 917, 1103, 1257 |
| TscAI | CASTG | 3 cut(s) | 88, 1470, 1535 |
| TseFI | GTSAC | 2 cut(s) | 79, 264 |
| TseI | GCWGC | 5 cut(s) | 333, 722, 1262, 1319, 1484 |
| Tsp45I | GTSAC | 2 cut(s) | 79, 264 |
| TspDTI | ATGAA | 9 cut(s) | 101, 271, 722, 840, 891, 1049, 1157, 1251, 1304 |
| TspGWI | ACGGA | 1 cut(s) | 894 |
| TspRI | CASTG | 3 cut(s) | 88, 1470, 1535 |
| VpaK11BI | GGWCC | 3 cut(s) | 701, 1135, 1388 |
| XapI | RAATTY | 4 cut(s) | 229, 386, 959, 1115 |
| XbaI | TCTAGA | 1 cut(s) | 1108 |
| XceI | RCATGY | 2 cut(s) | 315, 832 |
| XhoI | CTCGAG | 1 cut(s) | 31 |
| XmnI | GAANNNNTTC | 4 cut(s) | 348, 847, 869, 961 |
| XspI | CTAG | 5 cut(s) | 101, 194, 645, 1109, 1544 |
| ZrmI | AGTACT | 1 cut(s) | 192 |