pycom17g10400

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0012328
Physical Location & Seq
Reverse (-)
8011017 .. 8013587
2571 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2139 bp
ATGAGCTCTTCCAATGGAAGTTGCAAGCCCTTTGAAAGACAGCTCCGTGGCGTCGAGTCCTTTCTCTTCTCCGAACGTCTCCGCCTTGCTCAAGATCAAGATTTTATCATGGTAAGATTGTTGGAATATGTTAGCAACTTTGTAGCATTGAATTTGAGCACTTTTTTGTTTGAGTTTTTCATGTGTGGTGAATCTTGTCTCAGGACACAAGAAACCGGTTTGCCTGTTTCTGTTAGAGTTCGTGTTGGCGGAAAGATCTTCAACCTCCACAAGAGTGGATATTTCAACAAGAGATTGAACGAATCAAATGAGATTGAGCTGCCACCGGGGTTCCCTGGCGGGCCAGAGACTTTTGAGATGATTGCACTCTTCATCTATGGCTCCTCCACCTTGATTGATCCATTCAATGTGGTAGCCCTCAGATGTGCAGCAGAGTTTCTTGAGATGACAGAAGACTACTCCTCCGGAAACCTCTGCGAGCGCTTTGATCTCTACTTAAACCAAGTGGTGATGCAGAACTGGGATGACACCCTGATAGTACTGCAAAAGTGCCAAACTTCGCTTCCGTGGTCTGAAGACCTGCTCATCGTGAGCCGGTGCATAGAGTGCCTCGCCTTCATGGCCTGCATGGAGATCCTTGACCCAGAGAGAAGGCGTGACACACCTGTGCTCACGTTGGAAGCATTGAGCACACGAAATTGGAGCTGTGAAATGGGGAGGGAGATTCTGAGTCAAGACCTTTGGATCAAGGATCTCATTGCGCTGCCGTTTGGATTTTTTAAGAGGATTATAGGATCTTTGAGAAGGCAAGGCATGAAGGAAAAGTACTTGAGCCCCATCATTGTTTTCTATGCTAACAAGTGGGTGCTTTCGACGAAAACCCTCCAATTCTGGGAGAATTCTGGTCAGAGAAGTGGGGATGATCACAAAGTTTCGGTCATTTTACAAGGTGTTCTTGATTTGCTGCCGATGGGGGACAAGGCTAGTCGATCCATCCCAATCGGGTTTTACTTCGCAATTCTTTCTAGATCCCTGGAAGTAGGTATGAGGATCGATAGTAGGGTGAAGCTGGAAGGGCAGATTGTATCTCTGCTGCACTTTGCTCAGCTGGAAGACTTCTTGTTTCCAAAAAGTGGGAGTGAGTCAATTTCTTCCAGCACGGAGCTTGCAACAATGGAGAGCATAATTTCAGCATATGTATCATCTACCATGGAGTCGGACAACAATCTTTCAGCAGGAGACACAATTGTTGCAGAATTGTGGGATGGATATCTTTCCCATATAGCTCCTGATCCAAACATGGAGCATAAAAGGTTCATGGAACTCATCGAACGAGTCCCGATTTCATACAGACACTGTCATGATAAACTCTACAGGGCAATGAACATCTTCTTAAAGGCGCACCCGAATACATCCCAGGAAGAGAAGTGGGCAGTCTGCAAGTACCTCAACTGCCAAAAACTGTCACAAGAGGCATGCATTGAGGCTGTTCAAAACGAATTGATGCCGCTGCGTTTGATTGTCCAGGCGCTTTTTGTCCAGCAGCTCAGCACACACCAAGCTTTCAAAGAATGCTCAGATTCGTTCAGATATGCACATTGTCCAGAGTTTTCAGGGAGCATTGAAAGCTCTAGGTGTCCAAACTCAAAAAGCCAGAATCTCGGAGATAGTCCATGTGTGGACAGAGCAGAGTCCGGAAGCAGACCCTTGAGCTTCTTGCTGCAGAAGGACAATGTAAATCAGAGGCCTGAGTTATCGAGGAAGGAATATGAGTCAACAAGCTTCAGAATTCAGAACCTCGAACAAGAGCTCATGTCCTTGAAGCGGAGCCTTCAATGGCAGAGCATTTCAAAGAAAGAGCCGGCCTCAACCACAGAATCTAGCATGAAATTGTACGGCAAAGAAGGTAGATCAACAAGCAAAAGAAGTAACCCGCTCGGACAAGTGACAAGTTGCATTGGCTCTGTGAATTTTGCCTCACAGAGAAAGTATGCCAGTAGACTGCTGAAGGTCCTTCGGCGGATCTCCTTGTTTGGAGGTAAAAAGCCAAAGAGAAAGCCAGCTGCTTCCTCTCCATGGCCTAAGCCGATGCAGCAGAATACTCGTCAGAATAAAATGTGCGAAAATCAGAACCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

713

Amino Acids

81.15

Weight (kDa)

8.13

Isoelectric Point (pI)

59.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 246 - 493 2.5e-66 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012328)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48130
fragaria_vesca FvH4_6g41250 FvH4_6g41250 FvH4_6g41250
malus_domestica MD09G1121300.v1.1 MD17G1112300.v1.1
prunus_persica Prupe.3G202400_v2.0.a1
pyrus_communis pycom09g04570 pycom17g10400
rosa_chinensis RchiOBHm_Chr2g0156801
rosa_laevigata RLG00000020943
rosa_multiflora Rmu_co8389443.1_g000001
rosa_roxburghii Rroxscaffold_2G00092710
rosa_rugosa Rorug02G0456300
rosa_samantha Rh2AG521900 Rh2BG535300 Rh2CG506800 Rh2DG544300
rosa_wichuraiana Rw2G043090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 588
AccB7I CCANNNNNTGG 1 cut(s) 1133
AccBSI CCGCTC 1 cut(s) 1936
AccI GTMKAC 1 cut(s) 1999
AccIII TCCGGA 2 cut(s) 464, 1694
AciI CCGC 7 cut(s) 82, 249, 339, 1508, 1825, 1934, 2020
AcsI RAATTY 4 cut(s) 151, 898, 1788, 1969
AcuI CTGAAG 3 cut(s) 594, 1768, 2027
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 4 cut(s) 540, 827, 1445, 1895
AfeI AGCGCT 1 cut(s) 482
AfiI CCNNNNNNNGG 4 cut(s) 892, 1133, 1824, 2076
AgeI ACCGGT 1 cut(s) 215
AjnI CCWGG 4 cut(s) 334, 1032, 1416, 1524
AjuI GAANNNNNNNTTGG 2 cut(s) 546, 578
AleI CACNNNNGTG 2 cut(s) 273, 665
Alw21I GWGCWC 5 cut(s) 8, 161, 672, 692, 1812
Alw26I GTCTC 4 cut(s) 83, 203, 341, 1233
AlwNI CAGNNNCTG 1 cut(s) 1356
Aor13HI TCCGGA 2 cut(s) 464, 1694
Aor51HI AGCGCT 1 cut(s) 482
AoxI GGCC 5 cut(s) 341, 621, 1745, 1863, 2078
ApoI RAATTY 4 cut(s) 151, 898, 1788, 1969
ArsI GACNNNNNNTTYG 2 cut(s) 921, 953
AsiGI ACCGGT 1 cut(s) 215
Asp700I GAANNNNTTC 1 cut(s) 1388
AspLEI GCGC 4 cut(s) 483, 763, 1402, 1531
AspS9I GGNCC 2 cut(s) 341, 2011
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 3 cut(s) 200, 520, 1075
AvaII GGWCC 1 cut(s) 2011
BanII GRGCYC 3 cut(s) 8, 836, 1812
BarI GAAGNNNNNNTAC 2 cut(s) 809, 841
BbsI GAAGAC 3 cut(s) 459, 582, 1119
Bbv12I GWGCWC 5 cut(s) 8, 161, 672, 692, 1812
BccI CCATC 4 cut(s) 845, 964, 1001, 1259
BceAI ACGGC 2 cut(s) 751, 1912
BcgI CGANNNNNNTGC 2 cut(s) 2084, 2118
BciT130I CCWGG 4 cut(s) 336, 1034, 1418, 1526
BclI TGATCA 1 cut(s) 922
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 4 cut(s) 83, 203, 341, 1233
BfaI CTAG 4 cut(s) 984, 1026, 1632, 1881
BfmI CTRYAG 2 cut(s) 1372, 1721
BfoI RGCGCY 2 cut(s) 484, 1532
BfuAI ACCTGC 1 cut(s) 588
BglI GCCNNNNNGGC 1 cut(s) 620
BglII AGATCT 1 cut(s) 255
BlpI GCTNAGC 2 cut(s) 1104, 1547
BmcAI AGTACT 2 cut(s) 540, 827
Bme1390I CCNGG 5 cut(s) 327, 336, 1034, 1418, 1526
Bme18I GGWCC 1 cut(s) 2011
BmgT120I GGNCC 2 cut(s) 341, 2011
BmiI GGNNCC 3 cut(s) 332, 382, 1829
BmrFI CCNGG 5 cut(s) 327, 336, 1034, 1418, 1526
BmrI ACTGGG 1 cut(s) 529
BmsI GCATC 3 cut(s) 501, 1494, 2079
BmuI ACTGGG 1 cut(s) 529
BpiI GAAGAC 3 cut(s) 459, 582, 1119
BplI GAGNNNNNCTC 2 cut(s) 1850, 1882
Bpu10I CCTNAGC 1 cut(s) 2082
Bpu1102I GCTNAGC 2 cut(s) 1104, 1547
BpuEI CTTGAG 4 cut(s) 75, 461, 850, 1729
BpuMI CCSGG 1 cut(s) 327
Bsa29I ATCGAT 1 cut(s) 1053
BsaBI GATNNNNATC 1 cut(s) 1269
BsaHI GRCGYC 1 cut(s) 51
BsaJI CCNNGG 8 cut(s) 46, 326, 334, 566, 1032, 1209, 1416, 2075
BsaWI WCCGGW 3 cut(s) 215, 464, 1694
BsaXI ACNNNNNCTCC 2 cut(s) 446, 476
Bsc4I CCNNNNNNNGG 4 cut(s) 892, 1133, 1824, 2076
Bse118I RCCGGY 3 cut(s) 215, 594, 1861
Bse1I ACTGG 2 cut(s) 524, 1995
Bse3DI GCAATG 2 cut(s) 756, 1386
Bse8I GATNNNNATC 1 cut(s) 1269
BseAI TCCGGA 2 cut(s) 464, 1694
BseBI CCWGG 4 cut(s) 336, 1034, 1418, 1526
BseCI ATCGAT 1 cut(s) 1053
BseDI CCNNGG 8 cut(s) 46, 326, 334, 566, 1032, 1209, 1416, 2075
BseGI GGATG 5 cut(s) 529, 925, 993, 1270, 1412
BseJI GATNNNNATC 1 cut(s) 1269
BseLI CCNNNNNNNGG 4 cut(s) 892, 1133, 1824, 2076
BseMI GCAATG 2 cut(s) 756, 1386
BseMII CTCAG 7 cut(s) 214, 433, 719, 1118, 1561, 1590, 1740
BseNI ACTGG 2 cut(s) 524, 1995
BseRI GAGGAG 2 cut(s) 373, 451
BsgI GTGCAG 2 cut(s) 447, 1079
BshFI GGCC 5 cut(s) 343, 623, 1747, 1865, 2080
BshTI ACCGGT 1 cut(s) 215
BshVI ATCGAT 1 cut(s) 1053
BsiHKAI GWGCWC 5 cut(s) 8, 161, 672, 692, 1812
BsiSI CCGG 6 cut(s) 216, 326, 465, 595, 1695, 1862
BslFI GGGAC 2 cut(s) 989, 1322
BslI CCNNNNNNNGG 4 cut(s) 892, 1133, 1824, 2076
BsmAI GTCTC 4 cut(s) 83, 203, 341, 1233
BsmBI CGTCTC 1 cut(s) 83
BsmFI GGGAC 2 cut(s) 989, 1322
BsmI GAATGC 1 cut(s) 1577
BsnI GGCC 5 cut(s) 343, 623, 1747, 1865, 2080
Bsp1286I GDGCHC 6 cut(s) 8, 161, 672, 692, 836, 1812
Bsp13I TCCGGA 2 cut(s) 464, 1694
Bsp1720I GCTNAGC 2 cut(s) 1104, 1547
Bsp19I CCATGG 2 cut(s) 1209, 2075
BspACI CCGC 7 cut(s) 82, 249, 339, 1508, 1825, 1934, 2020
BspANI GGCC 5 cut(s) 343, 623, 1747, 1865, 2080
BspCNI CTCAG 7 cut(s) 213, 432, 720, 1117, 1560, 1589, 1741
BspDI ATCGAT 1 cut(s) 1053
BspEI TCCGGA 2 cut(s) 464, 1694
BspHI TCATGA 1 cut(s) 1360
BspLI GGNNCC 3 cut(s) 332, 382, 1829
BspMAI CTGCAG 1 cut(s) 1725
BspMI ACCTGC 1 cut(s) 588
BspQI GCTCTTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 1936
BsrDI GCAATG 2 cut(s) 756, 1386
BsrFI RCCGGY 3 cut(s) 215, 594, 1861
BsrI ACTGG 2 cut(s) 524, 1995
BssAI RCCGGY 3 cut(s) 215, 594, 1861
BssECI CCNNGG 8 cut(s) 46, 326, 334, 566, 1032, 1209, 1416, 2075
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 2 cut(s) 1209, 2075
Bst2UI CCWGG 4 cut(s) 336, 1034, 1418, 1526
Bst4CI ACNGT 2 cut(s) 1358, 1464
Bst6I CTCTTC 4 cut(s) 13, 71, 374, 1416
BstACI GRCGYC 1 cut(s) 51
BstAPI GCANNNNNTGC 1 cut(s) 606
BstC8I GCNNGC 8 cut(s) 26, 341, 479, 625, 1167, 1477, 1863, 2061
BstDEI CTNAG 8 cut(s) 200, 419, 728, 1104, 1547, 1576, 1749, 2082
BstDSI CCRYGG 4 cut(s) 46, 566, 1209, 2075
BstF5I GGATG 5 cut(s) 529, 925, 993, 1270, 1412
BstH2I RGCGCY 2 cut(s) 484, 1532
BstHHI GCGC 4 cut(s) 483, 763, 1402, 1531
BstMAI GTCTC 4 cut(s) 83, 203, 341, 1233
BstMWI GCNNNNNNNGC 5 cut(s) 606, 620, 1075, 1626, 2092
BstNI CCWGG 4 cut(s) 336, 1034, 1418, 1526
BstNSI RCATGY 1 cut(s) 1479
BstSCI CCNGG 5 cut(s) 325, 334, 1032, 1416, 1524
BstSFI CTRYAG 2 cut(s) 1372, 1721
BstV2I GAAGAC 3 cut(s) 459, 582, 1119
BstX2I RGATCY 6 cut(s) 255, 633, 751, 794, 1028, 2022
BstXI CCANNNNNNTGG 1 cut(s) 275
BstYI RGATCY 6 cut(s) 255, 633, 751, 794, 1028, 2022
Bsu15I ATCGAT 1 cut(s) 1053
BsuRI GGCC 5 cut(s) 343, 623, 1747, 1865, 2080
BsuTUI ATCGAT 1 cut(s) 1053
BtgI CCRYGG 4 cut(s) 46, 566, 1209, 2075
BtsCI GGATG 5 cut(s) 529, 925, 993, 1270, 1412
BtsIMutI CAGTG 2 cut(s) 1354, 2134
BveI ACCTGC 1 cut(s) 588
Cac8I GCNNGC 8 cut(s) 26, 341, 479, 625, 1167, 1477, 1863, 2061
CaiI CAGNNNCTG 1 cut(s) 1356
CciI TCATGA 1 cut(s) 1360
CfoI GCGC 4 cut(s) 483, 763, 1402, 1531
Cfr10I RCCGGY 3 cut(s) 215, 594, 1861
Cfr13I GGNCC 2 cut(s) 341, 2011
ClaI ATCGAT 1 cut(s) 1053
CseI GACGC 1 cut(s) 40
Csp6I GTAC 4 cut(s) 539, 826, 1444, 1894
CspAI ACCGGT 1 cut(s) 215
CspCI CAANNNNNGTGG 2 cut(s) 376, 411
CviQI GTAC 4 cut(s) 539, 826, 1444, 1894
DdeI CTNAG 8 cut(s) 200, 419, 728, 1104, 1547, 1576, 1749, 2082
Eam1104I CTCTTC 4 cut(s) 13, 71, 374, 1416
EarI CTCTTC 4 cut(s) 13, 71, 374, 1416
EciI GGCGGA 3 cut(s) 71, 264, 2035
Ecl136II GAGCTC 2 cut(s) 6, 1810
Eco130I CCWWGG 2 cut(s) 1209, 2075
Eco147I AGGCCT 1 cut(s) 1747
Eco24I GRGCYC 3 cut(s) 8, 836, 1812
Eco32I GATATC 1 cut(s) 1271
Eco47I GGWCC 1 cut(s) 2011
Eco47III AGCGCT 1 cut(s) 482
Eco53kI GAGCTC 2 cut(s) 6, 1810
Eco57I CTGAAG 3 cut(s) 594, 1768, 2027
EcoICRI GAGCTC 2 cut(s) 6, 1810
EcoO109I RGGNCCY 1 cut(s) 2011
EcoRI GAATTC 2 cut(s) 898, 1788
EcoRII CCWGG 4 cut(s) 334, 1032, 1416, 1524
EcoRV GATATC 1 cut(s) 1271
EcoT14I CCWWGG 2 cut(s) 1209, 2075
EcoT22I ATGCAT 1 cut(s) 1481
EcoT38I GRGCYC 3 cut(s) 8, 836, 1812
ErhI CCWWGG 2 cut(s) 1209, 2075
Esp3I CGTCTC 1 cut(s) 83
FalI AAGNNNNNCTT 2 cut(s) 939, 971
FaqI GGGAC 2 cut(s) 989, 1322
FauI CCCGC 2 cut(s) 332, 1941
FauNDI CATATG 1 cut(s) 1195
FbaI TGATCA 1 cut(s) 922
FblI GTMKAC 1 cut(s) 1999
FokI GGATG 5 cut(s) 536, 932, 980, 1277, 1399
FriOI GRGCYC 3 cut(s) 8, 836, 1812
FspBI CTAG 4 cut(s) 984, 1026, 1632, 1881
GlaI GCGC 4 cut(s) 482, 762, 1401, 1530
HaeII RGCGCY 2 cut(s) 484, 1532
HaeIII GGCC 5 cut(s) 343, 623, 1747, 1865, 2080
HapII CCGG 6 cut(s) 216, 326, 465, 595, 1695, 1862
HgaI GACGC 1 cut(s) 40
HhaI GCGC 4 cut(s) 483, 763, 1402, 1531
Hin1I GRCGYC 1 cut(s) 51
Hin6I GCGC 4 cut(s) 481, 761, 1400, 1529
HinP1I GCGC 4 cut(s) 481, 761, 1400, 1529
HincII GTYRAC 1 cut(s) 1776
HindII GTYRAC 1 cut(s) 1776
HindIII AAGCTT 2 cut(s) 1560, 1780
HpaII CCGG 6 cut(s) 216, 326, 465, 595, 1695, 1862
HphI GGTGA 3 cut(s) 200, 520, 1075
Hpy166II GTNNAC 3 cut(s) 1681, 1776, 2000
Hpy8I GTNNAC 3 cut(s) 1681, 1776, 2000
Hpy99I CGWCG 2 cut(s) 56, 877
HpyCH4III ACNGT 2 cut(s) 1358, 1464
HpyCH4IV ACGT 2 cut(s) 76, 674
HpyF10VI GCNNNNNNNGC 5 cut(s) 606, 620, 1075, 1626, 2092
HpyF3I CTNAG 8 cut(s) 200, 419, 728, 1104, 1547, 1576, 1749, 2082
HpySE526I ACGT 2 cut(s) 76, 674
Hsp92I GRCGYC 1 cut(s) 51
HspAI GCGC 4 cut(s) 481, 761, 1400, 1529
Kpn2I TCCGGA 2 cut(s) 464, 1694
KroI GCCGGC 1 cut(s) 1861
KroNI GCCGGC 1 cut(s) 1863
Ksp22I TGATCA 1 cut(s) 922
LguI GCTCTTC 1 cut(s) 13
LmnI GCTCC 8 cut(s) 48, 386, 702, 1162, 1291, 1303, 1617, 1827
LweI GCATC 3 cut(s) 501, 1494, 2079
MaeI CTAG 4 cut(s) 984, 1026, 1632, 1881
MaeII ACGT 2 cut(s) 76, 674
MaeIII GTNAC 4 cut(s) 656, 1464, 1928, 1945
MbiI CCGCTC 1 cut(s) 1936
MboII GAAGA 9 cut(s) 58, 250, 361, 464, 587, 1124, 1143, 1381, 1433
MfeI CAATTG 1 cut(s) 1245
MflI RGATCY 6 cut(s) 255, 633, 751, 794, 1028, 2022
MhlI GDGCHC 6 cut(s) 8, 161, 672, 692, 836, 1812
MlyI GAGTC 7 cut(s) 65, 739, 1151, 1223, 1344, 1700, 1781
MmeI TCCRAC 3 cut(s) 102, 657, 1197
Mph1103I ATGCAT 1 cut(s) 1481
MroI TCCGGA 2 cut(s) 464, 1694
MroNI GCCGGC 1 cut(s) 1861
MroXI GAANNNNTTC 1 cut(s) 1388
MseI TTAA 3 cut(s) 497, 780, 1394
MslI CAYNNNNRTG 3 cut(s) 273, 665, 1359
MspA1I CMGCKG 3 cut(s) 1108, 1510, 2063
MspI CCGG 6 cut(s) 216, 326, 465, 595, 1695, 1862
MspR9I CCNGG 5 cut(s) 327, 336, 1034, 1418, 1526
MunI CAATTG 1 cut(s) 1245
Mva1269I GAATGC 1 cut(s) 1577
MvaI CCWGG 4 cut(s) 336, 1034, 1418, 1526
MwoI GCNNNNNNNGC 5 cut(s) 606, 620, 1075, 1626, 2092
NaeI GCCGGC 1 cut(s) 1863
NciI CCSGG 1 cut(s) 327
NcoI CCATGG 2 cut(s) 1209, 2075
NdeI CATATG 1 cut(s) 1195
NgoMIV GCCGGC 1 cut(s) 1861
NlaIV GGNNCC 3 cut(s) 332, 382, 1829
NmuCI GTSAC 3 cut(s) 656, 1464, 1945
NsiI ATGCAT 1 cut(s) 1481
NspI RCATGY 1 cut(s) 1479
OliI CACNNNNGTG 2 cut(s) 273, 665
PaeI GCATGC 1 cut(s) 1479
PagI TCATGA 1 cut(s) 1360
PceI AGGCCT 1 cut(s) 1747
PciSI GCTCTTC 1 cut(s) 13
PctI GAATGC 1 cut(s) 1577
PdiI GCCGGC 1 cut(s) 1863
PdmI GAANNNNTTC 1 cut(s) 1388
PfeI GAWTC 6 cut(s) 191, 302, 724, 1580, 1657, 1877
PflFI GACNNNGTC 1 cut(s) 1356
PflMI CCANNNNNTGG 1 cut(s) 1133
PinAI ACCGGT 1 cut(s) 215
PleI GAGTC 7 cut(s) 64, 738, 1150, 1222, 1343, 1699, 1780
PpsI GAGTC 7 cut(s) 64, 738, 1150, 1222, 1343, 1699, 1780
PpuMI RGGWCCY 1 cut(s) 2011
Psp124BI GAGCTC 2 cut(s) 8, 1812
Psp5II RGGWCCY 1 cut(s) 2011
Psp6I CCWGG 4 cut(s) 334, 1032, 1416, 1524
PspGI CCWGG 4 cut(s) 334, 1032, 1416, 1524
PspN4I GGNNCC 3 cut(s) 332, 382, 1829
PspPI GGNCC 2 cut(s) 341, 2011
PspPPI RGGWCCY 1 cut(s) 2011
PstI CTGCAG 1 cut(s) 1725
PstNI CAGNNNCTG 1 cut(s) 1356
PsuI RGATCY 6 cut(s) 255, 633, 751, 794, 1028, 2022
PsyI GACNNNGTC 1 cut(s) 1356
PvuII CAGCTG 2 cut(s) 1108, 2063
RsaI GTAC 4 cut(s) 540, 827, 1445, 1895
RsaNI GTAC 4 cut(s) 539, 826, 1444, 1894
RseI CAYNNNNRTG 3 cut(s) 273, 665, 1359
SacI GAGCTC 2 cut(s) 8, 1812
SapI GCTCTTC 1 cut(s) 13
SaqAI TTAA 3 cut(s) 497, 780, 1394
Sau96I GGNCC 2 cut(s) 341, 2011
ScaI AGTACT 2 cut(s) 540, 827
SchI GAGTC 7 cut(s) 65, 739, 1151, 1223, 1344, 1700, 1781
ScrFI CCNGG 5 cut(s) 327, 336, 1034, 1418, 1526
SduI GDGCHC 6 cut(s) 8, 161, 672, 692, 836, 1812
SfaNI GCATC 3 cut(s) 501, 1494, 2079
SfcI CTRYAG 2 cut(s) 1372, 1721
SinI GGWCC 1 cut(s) 2011
SmiMI CAYNNNNRTG 3 cut(s) 273, 665, 1359
SmlI CTYRAG 4 cut(s) 90, 440, 829, 1708
SmoI CTYRAG 4 cut(s) 90, 440, 829, 1708
SphI GCATGC 1 cut(s) 1479
SseBI AGGCCT 1 cut(s) 1747
SsiI CCGC 7 cut(s) 82, 249, 339, 1508, 1825, 1934, 2020
SspMI CTAG 4 cut(s) 984, 1026, 1632, 1881
SstI GAGCTC 2 cut(s) 8, 1812
StuI AGGCCT 1 cut(s) 1747
StyD4I CCNGG 5 cut(s) 325, 334, 1032, 1416, 1524
StyI CCWWGG 2 cut(s) 1209, 2075
TaaI ACNGT 2 cut(s) 1358, 1464
TaiI ACGT 2 cut(s) 79, 677
TaqI TCGA 7 cut(s) 54, 872, 988, 1053, 1329, 1757, 1800
TaqII GACCGA 1 cut(s) 925
TatI WGTACW 2 cut(s) 538, 825
TauI GCSGC 1 cut(s) 1510
TfiI GAWTC 6 cut(s) 191, 302, 724, 1580, 1657, 1877
Tru1I TTAA 3 cut(s) 497, 780, 1394
Tru9I TTAA 3 cut(s) 497, 780, 1394
TscAI CASTG 1 cut(s) 1361
TseFI GTSAC 3 cut(s) 656, 1464, 1945
Tsp45I GTSAC 3 cut(s) 656, 1464, 1945
TspDTI ATGAA 8 cut(s) 169, 361, 607, 830, 1306, 1335, 1397, 1901
TspGWI ACGGA 3 cut(s) 35, 555, 1175
TspRI CASTG 1 cut(s) 1361
Tth111I GACNNNGTC 1 cut(s) 1356
Van91I CCANNNNNTGG 1 cut(s) 1133
VpaK11BI GGWCC 1 cut(s) 2011
XapI RAATTY 4 cut(s) 151, 898, 1788, 1969
XbaI TCTAGA 1 cut(s) 1025
XceI RCATGY 1 cut(s) 1479
XmiI GTMKAC 1 cut(s) 1999
XmnI GAANNNNTTC 1 cut(s) 1388
XspI CTAG 4 cut(s) 984, 1026, 1632, 1881
ZrmI AGTACT 2 cut(s) 540, 827
Zsp2I ATGCAT 1 cut(s) 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.