pycom17g10560

Vacuolar protein-sorting-associated protein 11 homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
8150972 .. 8154832
3861 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g10560.5

Sequence Viewer

Length: 2862 bp
ATGTACCAGTGGAGGAAATTCGAGTTCTTCGAGGAGAAATTGGCGGGAAAGTGCGCGATTCCCGAGGAAGTGGAAGGGAAGATCGAGTGTTGCTCGAGCGGCAGAGGGAAGGTGGTGATCGGCTGCGACGACGGCACAGTCAGCTTCCTCGACCGCGGCCTCAACTTCAGCTACGGATTCCAAGCTCACTCCTCCTCCGCGCTCTTCCTTCAGCAGCTCAAGCAACGCAACTATTTGGTGACAATTGGAGAAGATGAACAAATTACTCCGCAGCAATCGGCAATGTGCCTCAAGGTTTTCGACCTGGATAGGATGCAGTCCGAGGGCTCGAGCTCAAGCACAACGAGCCCTGATTGCATTGGAATCTTGAGGATATTCACTAACCAATTTCCTGAAGCAAAGATTACATCGTTTTTAGTACTAGAGGAAGCACCTCCGATATTGCTTATAGCTATTGGATTAGATAATGGCTCAATTTACTGCATTAAAGGGGATATTGCACGAGAGCGAATCACCCGGTTCAAGCTTCAGGTGGAAAACCTTTCTGACAAGAGCCAATCCTCGGTTACGGGACTGGGGTTCAGAGTGGACGGTCAAGCGCTTCAGTTGTTTGCTGTGACTCCGTCTTCTGTGAGCTTGTTCATCTTGCAGAATCAACCCTCAAACACAAGGAGGCAGACCCTAGATCAGATCGGAAGTAATGTGAACAGTGTTGCAATGAGTGATCGCTCGGAGTTGATAATTGGTCGACCTGAGGCGGTTTACTTTTATGAAGTTGATGGGCGTGGACCATGTTGGGCTTTTGAAGGAGAAAAGAAATTTTTAGGGTGGTTTCGTGGATACCTTCTTTGTGTTATTGCAGATCAAATAAATAGCAGCAACACTTTCAACATTTATGACCTGAAGAACCGTTTAATTGCTCACAGCCTAGTGGTTAAAGAGGTTTCTCACATGCTTTGTGAATGGGGTAATATAATACTTATCATGGCTGACAAGTCAGCTTTGTGCATTGGGGAGAAGGATATGGAGAGCAAGTTAGATATGCTCTTTAAGAAGAATCTTTACACTGTTGCCATCAACCTTTTTCAAAGTCAGCAAGCGGATGCTGCCGTAAATGCAGAAGTGCTGAGGAAGTATGGGGATCATCTATATAGCAAGCAAGATTATGATGAGGCAATGGCCCAGTATATCCATACCATTGGTCACCTTGAGCCTTCTTATGTGATACAGAAGTTTCTAGATGCACAACGAATCTACAACCTGACAAATTACTTGGAAAAATTGCATGAGAAGGGGCTTGCTTCCAAAGATCATACCACTCTTCTACTGAATTGCTACACCAAATTGAAAGATGTTGAGAAGCTAAATGTGTTCATTAAAAGTGAGGATGGTATTGGGGAACATAAATTTGATGTGGAGACTGCAATAAGAGTCTGCCGTGCTACCAATTACCATGAGCATGCAATGTATGTTGCTAAAAAGGCTGGGAAGCACGAATGGTATTTAAAGATCTTACTTGAAGATCTTGGCCGATATGAGGAAGCCTTGCAATATATTTCAAGCCTTGAACCAAGCCAAGCTGGAGCGACAGTGGAAGAGTATGGTAAGATTCTTATAGAGCACAAGCCTGTGGAAACAATTGAGATACTCATAAGGCTGTGCACTGAGGATGGCGAATCATCCAAGAGAGGAGCTGCTAATGGTGCGTACTTGACAATGCTGCCATCTCCAGTTGATTTTCTCAACATCTTCATCCATCATCTTCCCTGGCTTATGGATTTTCTTGAAAAATATACCAACAAGGTCAAGGACTCTCCTGCTCAAGTAGAAATCCATAACACACTCTTGGAGTTGTACTTGTCCAATGACTTGAGCTTCCCATCATTATCACAAGCTAGCAATGGCGAAGGTCTGAATCTCAGGGCTAGATCAGGTGCAGCTGCAACGTCAAGAAGCCAGTCCAATGGGAAATTGTTTGCTGATACCAAAGATTCAAACAAGGAAAAGGACCGTTTGGAAAAGCAAGAGAAAGGGCTACGACTTCTTAAGAGCGCATGGCCATCTGACCTGGAACATCCGCTTTATGATGTTGACCTTGCCATAATTCTTTGTGAAATGAATGCATTTAAGGAAGGCCTTCTATATCTCTATGAAAAATTGAAACTCTATAAGGAGGTGATTGCTTGCTACATGCAAGCTCATGACCATGGGGGTTTGATTGCATGCTGCAAACGACTAGGGGATTCAGGTAAGGGCGGGGACCCAACTCTTTGGGCAGATCTGCTAAAATATTTTGGTGAACTTGGAGAAGATTGCTCCAAAGAAGTGAAGGAAGTTTTGACATATATAGAAAGGGATGACATATTGCCTCCTATCATTGTTCTTCAAACACTATCCAGAAATCCATGTCTCACACTCTCTGTCATTAAGGATTACATTGCTAGAAAGCTTGAACAAGAATCAAAATTGATTGAAGAGGACCGTCGAGCAATTGAGAAGTATCAGGAAACCACGTCGGCAATGAGAAACGAAATTCAGGATCATACGACAAATGCCAGAATCTTTCAGCTCAGCAAGTGTACCGCATGCACTTTCACCCTCGATCTCCCGGCTGTACATTTTATGTGTATCCACTCGTTCCATCAGCGTTGCCTCGGCGATAATGAGAAGGAATGTCCTGTGTGTGCTCCTGAATACAAATCTGTTCTTGAAACAAAAAGAAGTCTAGAGCAGAACTCCAAAGATCAGGATCGGTTCTTCCAGCAAGTTAAAAGTTCAAAGGACGGTTTTTCTGTGATCGCCGAGTATTTTGGGAAGGGGGTGATCAGCAAAACCACTAATGGATCCACAGGTGCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000323 GO:0000325 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005768 GO:0005769 GO:0005770 GO:0005773 GO:0005774 GO:0005856 GO:0005884 GO:0006810 GO:0006887 GO:0006904 GO:0006906 GO:0006996 GO:0007032 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0008150 GO:0008333 GO:0009705 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010256 GO:0010604 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0019222 GO:0019904 GO:0019905 GO:0022406 GO:0030139 GO:0030674 GO:0030897 GO:0031090 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031338 GO:0031410 GO:0031982 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032879 GO:0032940 GO:0032991 GO:0033043 GO:0033263 GO:0034058 GO:0035542 GO:0042144 GO:0042176 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0046903 GO:0046907 GO:0048278 GO:0048284 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051049 GO:0051050 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051640 GO:0051641 GO:0051649 GO:0060090 GO:0060255 GO:0060341 GO:0060627 GO:0061024 GO:0061025 GO:0065007 GO:0071840 GO:0080090 GO:0080171 GO:0090174 GO:0097576 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0099023 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140029 GO:0140056 GO:1901998 GO:1902115 GO:1903362 GO:1903364 GO:1903649 GO:1903651 GO:2000641 GO:2000643
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

954

Amino Acids

107.62

Weight (kDa)

5.67

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012419)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 137
AccBSI CCGCTC 1 cut(s) 99
AccI GTMKAC 1 cut(s) 748
AccII CGCG 3 cut(s) 56, 156, 200
AclWI GGATC 5 cut(s) 1149, 2547, 2757, 2838, 2851
AcoI YGGCCR 2 cut(s) 1528, 2057
AcsI RAATTY 4 cut(s) 17, 818, 1406, 2532
AcuI CTGAAG 6 cut(s) 151, 194, 414, 512, 587, 923
AfaI GTAC 6 cut(s) 5, 420, 1709, 1856, 2581, 2616
AfeI AGCGCT 1 cut(s) 600
AfiI CCNNNNNNNGG 2 cut(s) 562, 1537
AflII CTTAAG 1 cut(s) 2045
AjiI CACGTC 1 cut(s) 2514
AjnI CCWGG 3 cut(s) 303, 1766, 2067
Alw21I GWGCWC 4 cut(s) 335, 1623, 1664, 2689
Alw26I GTCTC 2 cut(s) 1412, 2414
Alw44I GTGCAC 1 cut(s) 1660
AlwI GGATC 5 cut(s) 1149, 2547, 2757, 2838, 2851
Ama87I CYCGRG 3 cut(s) 62, 94, 328
Aor51HI AGCGCT 1 cut(s) 600
AoxI GGCC 5 cut(s) 157, 1179, 1528, 2057, 2134
ApaLI GTGCAC 1 cut(s) 1660
ApoI RAATTY 4 cut(s) 17, 818, 1406, 2532
Asp700I GAANNNNTTC 1 cut(s) 2136
AspLEI GCGC 4 cut(s) 56, 202, 601, 2054
AspS9I GGNCC 5 cut(s) 788, 1180, 2008, 2260, 2479
AsuC2I CCSGG 2 cut(s) 517, 2609
AsuHPI GGTGA 8 cut(s) 127, 250, 505, 1196, 2188, 2309, 2587, 2833
AsuNHI GCTAGC 1 cut(s) 1895
AvaI CYCGRG 3 cut(s) 62, 94, 328
AvaII GGWCC 4 cut(s) 788, 2008, 2260, 2479
AxyI CCTNAGG 1 cut(s) 753
BaeGI GKGCMC 1 cut(s) 1664
BaeI ACNNNNGTAYC 2 cut(s) 1217, 1250
BalI TGGCCA 1 cut(s) 2059
BamHI GGATCC 1 cut(s) 2843
BanII GRGCYC 3 cut(s) 329, 335, 350
BarI GAAGNNNNNNTAC 2 cut(s) 1046, 1078
BauI CACGAG 1 cut(s) 501
BbsI GAAGAC 1 cut(s) 618
Bbv12I GWGCWC 4 cut(s) 335, 1623, 1664, 2689
BbvCI CCTCAGC 1 cut(s) 1127
BccI CCATC 9 cut(s) 773, 1082, 1382, 1664, 1732, 1764, 1888, 2068, 2649
BceAI ACGGC 3 cut(s) 148, 1094, 1422
BciT130I CCWGG 3 cut(s) 305, 1768, 2069
BciVI GTATCC 2 cut(s) 833, 2639
BclI TGATCA 1 cut(s) 2823
BcnI CCSGG 2 cut(s) 517, 2609
BcoDI GTCTC 2 cut(s) 1412, 2414
BfaI CTAG 9 cut(s) 422, 683, 929, 1238, 1896, 1926, 2237, 2442, 2726
BfoI RGCGCY 1 cut(s) 602
BfrI CTTAAG 1 cut(s) 2045
BfuI GTATCC 2 cut(s) 833, 2639
BglII AGATCT 3 cut(s) 1509, 1522, 2278
BlpI GCTNAGC 1 cut(s) 2570
BmcAI AGTACT 1 cut(s) 420
Bme1390I CCNGG 5 cut(s) 305, 517, 1768, 2069, 2609
Bme18I GGWCC 4 cut(s) 788, 2008, 2260, 2479
BmeT110I CYCGRG 3 cut(s) 62, 94, 328
BmgBI CACGTC 1 cut(s) 2514
BmgT120I GGNCC 5 cut(s) 788, 1180, 2008, 2260, 2479
BmiI GGNNCC 3 cut(s) 2261, 2262, 2845
BmrFI CCNGG 5 cut(s) 305, 517, 1768, 2069, 2609
BmrI ACTGGG 2 cut(s) 584, 1177
BmsI GCATC 3 cut(s) 303, 1093, 1231
BmtI GCTAGC 1 cut(s) 1899
BmuI ACTGGG 2 cut(s) 584, 1177
BpiI GAAGAC 1 cut(s) 618
BplI GAGNNNNNCTC 4 cut(s) 77, 109, 2720, 2752
BpmI CTGGAG 2 cut(s) 1602, 1713
Bpu10I CCTNAGC 1 cut(s) 1127
Bpu1102I GCTNAGC 1 cut(s) 2570
BpuEI CTTGAG 7 cut(s) 203, 275, 319, 388, 1229, 1806, 1891
BpuMI CCSGG 2 cut(s) 517, 2609
BsaBI GATNNNNATC 1 cut(s) 2748
BsaJI CCNNGG 7 cut(s) 63, 154, 321, 561, 1766, 2206, 2653
BsaXI ACNNNNNCTCC 6 cut(s) 179, 209, 1019, 1049, 1575, 1605
Bsc4I CCNNNNNNNGG 2 cut(s) 562, 1537
Bse1I ACTGG 5 cut(s) 7, 579, 1183, 1730, 1957
Bse21I CCTNAGG 1 cut(s) 753
Bse3DI GCAATG 7 cut(s) 288, 723, 1182, 1470, 1906, 2436, 2526
Bse8I GATNNNNATC 1 cut(s) 2748
BseBI CCWGG 3 cut(s) 305, 1768, 2069
BseDI CCNNGG 7 cut(s) 63, 154, 321, 561, 1766, 2206, 2653
BseGI GGATG 8 cut(s) 318, 1108, 1393, 1675, 1679, 1752, 2074, 2362
BseJI GATNNNNATC 1 cut(s) 2748
BseLI CCNNNNNNNGG 2 cut(s) 562, 1537
BseMI GCAATG 7 cut(s) 288, 723, 1182, 1470, 1906, 2436, 2526
BseMII CTCAG 5 cut(s) 744, 1118, 1656, 1933, 2584
BseNI ACTGG 5 cut(s) 7, 579, 1183, 1730, 1957
BseRI GAGGAG 4 cut(s) 47, 181, 184, 1704
BseSI GKGCMC 1 cut(s) 1664
BseYI CCCAGC 1 cut(s) 1484
BsgI GTGCAG 1 cut(s) 1956
Bsh1236I CGCG 3 cut(s) 56, 156, 200
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 5 cut(s) 159, 1181, 1530, 2059, 2136
BsiEI CGRYCG 1 cut(s) 154
BsiHKAI GWGCWC 4 cut(s) 335, 1623, 1664, 2689
BsiHKCI CYCGRG 3 cut(s) 62, 94, 328
BsiSI CCGG 2 cut(s) 517, 2609
BslFI GGGAC 2 cut(s) 585, 2273
BslI CCNNNNNNNGG 2 cut(s) 562, 1537
BsmAI GTCTC 2 cut(s) 1412, 2414
BsmFI GGGAC 2 cut(s) 585, 2273
BsmI GAATGC 1 cut(s) 2125
BsnI GGCC 5 cut(s) 159, 1181, 1530, 2059, 2136
BsoBI CYCGRG 3 cut(s) 62, 94, 328
Bsp1286I GDGCHC 6 cut(s) 329, 335, 350, 1623, 1664, 2689
Bsp1407I TGTACA 1 cut(s) 2614
Bsp1720I GCTNAGC 1 cut(s) 2570
Bsp19I CCATGG 1 cut(s) 2206
BspANI GGCC 5 cut(s) 159, 1181, 1530, 2059, 2136
BspCNI CTCAG 5 cut(s) 745, 1119, 1657, 1932, 2583
BspFNI CGCG 3 cut(s) 56, 156, 200
BspHI TCATGA 1 cut(s) 2200
BspLI GGNNCC 3 cut(s) 2261, 2262, 2845
BspOI GCTAGC 1 cut(s) 1899
BspPI GGATC 5 cut(s) 1149, 2547, 2757, 2838, 2851
BspQI GCTCTTC 1 cut(s) 209
BspTI CTTAAG 1 cut(s) 2045
BsrBI CCGCTC 1 cut(s) 99
BsrDI GCAATG 7 cut(s) 288, 723, 1182, 1470, 1906, 2436, 2526
BsrGI TGTACA 1 cut(s) 2614
BsrI ACTGG 5 cut(s) 7, 579, 1183, 1730, 1957
BssECI CCNNGG 7 cut(s) 63, 154, 321, 561, 1766, 2206, 2653
BssSI CACGAG 1 cut(s) 501
BssT1I CCWWGG 1 cut(s) 2206
Bst2BI CACGAG 1 cut(s) 501
Bst2UI CCWGG 3 cut(s) 305, 1768, 2069
Bst4CI ACNGT 9 cut(s) 139, 593, 710, 911, 1069, 1591, 2012, 2483, 2786
Bst6I CTCTTC 4 cut(s) 209, 1326, 1590, 2469
BstAFI CTTAAG 1 cut(s) 2045
BstAUI TGTACA 1 cut(s) 2614
BstC8I GCNNGC 9 cut(s) 1098, 1157, 1299, 1461, 1897, 2185, 2196, 2224, 2587
BstDEI CTNAG 5 cut(s) 753, 1127, 1665, 1919, 2570
BstDSI CCRYGG 2 cut(s) 154, 2206
BstEII GGTNACC 1 cut(s) 1202
BstF5I GGATG 8 cut(s) 318, 1108, 1393, 1675, 1679, 1752, 2074, 2362
BstFNI CGCG 3 cut(s) 56, 156, 200
BstH2I RGCGCY 1 cut(s) 602
BstHHI GCGC 4 cut(s) 56, 202, 601, 2054
BstMAI GTCTC 2 cut(s) 1412, 2414
BstMCI CGRYCG 1 cut(s) 154
BstNI CCWGG 3 cut(s) 305, 1768, 2069
BstNSI RCATGY 5 cut(s) 955, 1463, 2194, 2226, 2589
BstPI GGTNACC 1 cut(s) 1202
BstSCI CCNGG 5 cut(s) 303, 515, 1766, 2067, 2607
BstSLI GKGCMC 1 cut(s) 1664
BstUI CGCG 3 cut(s) 56, 156, 200
BstV2I GAAGAC 1 cut(s) 618
BstX2I RGATCY 4 cut(s) 1509, 1522, 2278, 2843
BstXI CCANNNNNNTGG 3 cut(s) 1199, 1964, 2271
BstYI RGATCY 4 cut(s) 1509, 1522, 2278, 2843
Bsu36I CCTNAGG 1 cut(s) 753
BsuI GTATCC 2 cut(s) 833, 2639
BsuRI GGCC 5 cut(s) 159, 1181, 1530, 2059, 2136
BtgI CCRYGG 2 cut(s) 154, 2206
BtrI CACGTC 1 cut(s) 2514
BtsCI GGATG 8 cut(s) 318, 1108, 1393, 1675, 1679, 1752, 2074, 2362
BtsIMutI CAGTG 5 cut(s) 14, 715, 1065, 1596, 1662
Cac8I GCNNGC 9 cut(s) 1098, 1157, 1299, 1461, 1897, 2185, 2196, 2224, 2587
CciI TCATGA 1 cut(s) 2200
CfoI GCGC 4 cut(s) 56, 202, 601, 2054
Cfr13I GGNCC 5 cut(s) 788, 1180, 2008, 2260, 2479
Cfr42I CCGCGG 1 cut(s) 157
Csp6I GTAC 6 cut(s) 4, 419, 1708, 1855, 2580, 2615
CviQI GTAC 6 cut(s) 4, 419, 1708, 1855, 2580, 2615
DdeI CTNAG 5 cut(s) 753, 1127, 1665, 1919, 2570
DraI TTTAAA 1 cut(s) 1506
DrdI GACNNNNNNGTC 1 cut(s) 137
DseDI GACNNNNNNGTC 1 cut(s) 137
EaeI YGGCCR 2 cut(s) 1528, 2057
Eam1104I CTCTTC 4 cut(s) 209, 1326, 1590, 2469
EarI CTCTTC 4 cut(s) 209, 1326, 1590, 2469
Ecl136II GAGCTC 1 cut(s) 333
Eco130I CCWWGG 1 cut(s) 2206
Eco147I AGGCCT 1 cut(s) 2136
Eco24I GRGCYC 3 cut(s) 329, 335, 350
Eco47I GGWCC 4 cut(s) 788, 2008, 2260, 2479
Eco47III AGCGCT 1 cut(s) 600
Eco53kI GAGCTC 1 cut(s) 333
Eco57I CTGAAG 6 cut(s) 151, 194, 414, 512, 587, 923
Eco81I CCTNAGG 1 cut(s) 753
Eco88I CYCGRG 3 cut(s) 62, 94, 328
Eco91I GGTNACC 1 cut(s) 1202
EcoICRI GAGCTC 1 cut(s) 333
EcoO109I RGGNCCY 1 cut(s) 2260
EcoO65I GGTNACC 1 cut(s) 1202
EcoRII CCWGG 3 cut(s) 303, 1766, 2067
EcoT14I CCWWGG 1 cut(s) 2206
EcoT22I ATGCAT 1 cut(s) 2125
EcoT38I GRGCYC 3 cut(s) 329, 335, 350
ErhI CCWWGG 1 cut(s) 2206
FaqI GGGAC 2 cut(s) 585, 2273
FauI CCCGC 2 cut(s) 37, 2249
FbaI TGATCA 1 cut(s) 2823
FblI GTMKAC 1 cut(s) 748
FokI GGATG 8 cut(s) 325, 1115, 1400, 1666, 1682, 1739, 2061, 2369
FriOI GRGCYC 3 cut(s) 329, 335, 350
FspBI CTAG 9 cut(s) 422, 683, 929, 1238, 1896, 1926, 2237, 2442, 2726
GlaI GCGC 4 cut(s) 55, 201, 600, 2053
GsaI CCCAGC 1 cut(s) 1488
GsuI CTGGAG 2 cut(s) 1602, 1713
HaeII RGCGCY 1 cut(s) 602
HaeIII GGCC 5 cut(s) 159, 1181, 1530, 2059, 2136
HapII CCGG 2 cut(s) 517, 2609
HhaI GCGC 4 cut(s) 56, 202, 601, 2054
Hin6I GCGC 4 cut(s) 54, 200, 599, 2052
HinP1I GCGC 4 cut(s) 54, 200, 599, 2052
HincII GTYRAC 2 cut(s) 749, 2092
HindII GTYRAC 2 cut(s) 749, 2092
HindIII AAGCTT 2 cut(s) 524, 2447
HpaII CCGG 2 cut(s) 517, 2609
HphI GGTGA 8 cut(s) 127, 250, 505, 1196, 2188, 2309, 2587, 2833
Hpy166II GTNNAC 9 cut(s) 589, 706, 749, 763, 788, 1662, 2092, 2300, 2580
Hpy188I TCNGA 9 cut(s) 322, 438, 547, 584, 690, 695, 733, 1914, 2065
Hpy8I GTNNAC 9 cut(s) 589, 706, 749, 763, 788, 1662, 2092, 2300, 2580
Hpy99I CGWCG 4 cut(s) 131, 134, 2487, 2518
HpyCH4III ACNGT 9 cut(s) 139, 593, 710, 911, 1069, 1591, 2012, 2483, 2786
HpyCH4IV ACGT 2 cut(s) 1946, 2513
HpyF3I CTNAG 5 cut(s) 753, 1127, 1665, 1919, 2570
HpySE526I ACGT 2 cut(s) 1946, 2513
HspAI GCGC 4 cut(s) 54, 200, 599, 2052
KflI GGGWCCC 1 cut(s) 2260
Ksp22I TGATCA 1 cut(s) 2823
KspI CCGCGG 1 cut(s) 157
LguI GCTCTTC 1 cut(s) 209
LmnI GCTCC 4 cut(s) 1583, 1691, 2321, 2692
LweI GCATC 3 cut(s) 303, 1093, 1231
MaeI CTAG 9 cut(s) 422, 683, 929, 1238, 1896, 1926, 2237, 2442, 2726
MaeII ACGT 2 cut(s) 1946, 2513
MaeIII GTNAC 4 cut(s) 238, 565, 616, 1202
MbiI CCGCTC 1 cut(s) 99
MfeI CAATTG 3 cut(s) 243, 1638, 2490
MflI RGATCY 4 cut(s) 1509, 1522, 2278, 2843
MhlI GDGCHC 6 cut(s) 329, 335, 350, 1623, 1664, 2689
MlsI TGGCCA 1 cut(s) 2059
MluNI TGGCCA 1 cut(s) 2059
MlyI GAGTC 3 cut(s) 613, 1440, 1805
Mox20I TGGCCA 1 cut(s) 2059
Mph1103I ATGCAT 1 cut(s) 2125
MroXI GAANNNNTTC 1 cut(s) 2136
MscI TGGCCA 1 cut(s) 2059
MslI CAYNNNNRTG 2 cut(s) 1458, 2205
Msp20I TGGCCA 1 cut(s) 2059
MspA1I CMGCKG 2 cut(s) 156, 1940
MspCI CTTAAG 1 cut(s) 2045
MspI CCGG 2 cut(s) 517, 2609
MspR9I CCNGG 5 cut(s) 305, 517, 1768, 2069, 2609
MunI CAATTG 3 cut(s) 243, 1638, 2490
Mva1269I GAATGC 1 cut(s) 2125
MvaI CCWGG 3 cut(s) 305, 1768, 2069
MvnI CGCG 3 cut(s) 56, 156, 200
NciI CCSGG 2 cut(s) 517, 2609
NcoI CCATGG 1 cut(s) 2206
NheI GCTAGC 1 cut(s) 1895
NlaIV GGNNCC 3 cut(s) 2261, 2262, 2845
NmeAIII GCCGAG 2 cut(s) 2634, 2827
NmuCI GTSAC 3 cut(s) 238, 616, 1202
NsiI ATGCAT 1 cut(s) 2125
NspI RCATGY 5 cut(s) 955, 1463, 2194, 2226, 2589
PaeI GCATGC 3 cut(s) 1463, 2226, 2589
PaeR7I CTCGAG 2 cut(s) 94, 328
PagI TCATGA 1 cut(s) 2200
PceI AGGCCT 1 cut(s) 2136
PciSI GCTCTTC 1 cut(s) 209
PcsI WCGNNNNNNNCGW 2 cut(s) 27, 126
PctI GAATGC 1 cut(s) 2125
PdmI GAANNNNTTC 1 cut(s) 2136
PflFI GACNNNGTC 1 cut(s) 622
PleI GAGTC 3 cut(s) 613, 1439, 1805
PpsI GAGTC 3 cut(s) 613, 1439, 1805
PpuMI RGGWCCY 1 cut(s) 2260
Psp124BI GAGCTC 1 cut(s) 335
Psp5II RGGWCCY 1 cut(s) 2260
Psp6I CCWGG 3 cut(s) 303, 1766, 2067
PspEI GGTNACC 1 cut(s) 1202
PspFI CCCAGC 1 cut(s) 1484
PspGI CCWGG 3 cut(s) 303, 1766, 2067
PspN4I GGNNCC 3 cut(s) 2261, 2262, 2845
PspPI GGNCC 5 cut(s) 788, 1180, 2008, 2260, 2479
PspPPI RGGWCCY 1 cut(s) 2260
PspXI VCTCGAGB 2 cut(s) 94, 328
PsuI RGATCY 4 cut(s) 1509, 1522, 2278, 2843
PsyI GACNNNGTC 1 cut(s) 622
PvuII CAGCTG 1 cut(s) 1940
RsaI GTAC 6 cut(s) 5, 420, 1709, 1856, 2581, 2616
RsaNI GTAC 6 cut(s) 4, 419, 1708, 1855, 2580, 2615
RseI CAYNNNNRTG 2 cut(s) 1458, 2205
SacI GAGCTC 1 cut(s) 335
SacII CCGCGG 1 cut(s) 157
SalI GTCGAC 1 cut(s) 747
SapI GCTCTTC 1 cut(s) 209
Sau96I GGNCC 5 cut(s) 788, 1180, 2008, 2260, 2479
ScaI AGTACT 1 cut(s) 420
SchI GAGTC 3 cut(s) 613, 1440, 1805
ScrFI CCNGG 5 cut(s) 305, 517, 1768, 2069, 2609
SduI GDGCHC 6 cut(s) 329, 335, 350, 1623, 1664, 2689
SfaNI GCATC 3 cut(s) 303, 1093, 1231
Sfr274I CTCGAG 2 cut(s) 94, 328
Sfr303I CCGCGG 1 cut(s) 157
SgrBI CCGCGG 1 cut(s) 157
SinI GGWCC 4 cut(s) 788, 2008, 2260, 2479
SlaI CTCGAG 2 cut(s) 94, 328
SmiMI CAYNNNNRTG 2 cut(s) 1458, 2205
SphI GCATGC 3 cut(s) 1463, 2226, 2589
SseBI AGGCCT 1 cut(s) 2136
SspI AATATT 1 cut(s) 2291
SspMI CTAG 9 cut(s) 422, 683, 929, 1238, 1896, 1926, 2237, 2442, 2726
SstI GAGCTC 1 cut(s) 335
StuI AGGCCT 1 cut(s) 2136
StyD4I CCNGG 5 cut(s) 303, 515, 1766, 2067, 2607
StyI CCWWGG 1 cut(s) 2206
TaaI ACNGT 9 cut(s) 139, 593, 710, 911, 1069, 1591, 2012, 2483, 2786
TaiI ACGT 2 cut(s) 1949, 2516
TatI WGTACW 3 cut(s) 418, 1854, 2614
TauI GCSGC 2 cut(s) 102, 159
TscAI CASTG 5 cut(s) 14, 715, 1072, 1596, 1669
TseFI GTSAC 3 cut(s) 238, 616, 1202
Tsp45I GTSAC 3 cut(s) 238, 616, 1202
TspDTI ATGAA 7 cut(s) 270, 631, 786, 1363, 1741, 2132, 2166
TspGWI ACGGA 2 cut(s) 189, 612
TspRI CASTG 5 cut(s) 14, 715, 1072, 1596, 1669
Tth111I GACNNNGTC 1 cut(s) 622
Vha464I CTTAAG 1 cut(s) 2045
VneI GTGCAC 1 cut(s) 1660
VpaK11BI GGWCC 4 cut(s) 788, 2008, 2260, 2479
XapI RAATTY 4 cut(s) 17, 818, 1406, 2532
XbaI TCTAGA 2 cut(s) 1237, 2725
XceI RCATGY 5 cut(s) 955, 1463, 2194, 2226, 2589
XhoI CTCGAG 2 cut(s) 94, 328
XmiI GTMKAC 1 cut(s) 748
XmnI GAANNNNTTC 1 cut(s) 2136
XspI CTAG 9 cut(s) 422, 683, 929, 1238, 1896, 1926, 2237, 2442, 2726
ZrmI AGTACT 1 cut(s) 420
Zsp2I ATGCAT 1 cut(s) 2125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.